prot_P-littoralis_Contig714.14.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig714.14.1
Unique Nameprot_P-littoralis_Contig714.14.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length140
Homology
BLAST of mRNA_P-littoralis_Contig714.14.1 vs. uniprot
Match: A0A6H5JET4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET4_9PHAE)

HSP 1 Score: 225 bits (573), Expect = 1.420e-65
Identity = 109/139 (78.42%), Postives = 125/139 (89.93%), Query Frame = 0
Query:    1 VIGLDIEWEISAAGAPVNPPATIQLAAGKVVVIFHVLHGQRAVPGELPDELVELLEDDKLTKTGVGIKGDCTKLSNSYGVEVSRVVDLRSLAMERKVEVGLRRGLADLCVHLLGRTLPKDSSVRISRWNTAELSQEQKR 139
            ++ LDIEWEISAAGAP NPPATIQLAAGK VVIFHVLHGQR+VP ELPD LV+LLED KLTKTGVGIKGDCT+L++ YGVEV+  VDLRSLA+ERKVE+GLRRGLADLCVHLLG+ LPKD +VR+S+WN  +LS +QKR
Sbjct:  253 LLALDIEWEISAAGAPANPPATIQLAAGKRVVIFHVLHGQRSVPAELPDPLVDLLEDTKLTKTGVGIKGDCTRLTSFYGVEVAHAVDLRSLAVERKVELGLRRGLADLCVHLLGQQLPKDPTVRLSKWNKLDLSDDQKR 391          
BLAST of mRNA_P-littoralis_Contig714.14.1 vs. uniprot
Match: UPI0011D1BD43 (Werner Syndrome-like exonuclease n=2 Tax=Syzygium oleosum TaxID=219896 RepID=UPI0011D1BD43)

HSP 1 Score: 92.0 bits (227), Expect = 2.990e-20
Identity = 59/138 (42.75%), Postives = 74/138 (53.62%), Query Frame = 0
Query:    1 VIGLDIEWEISAAGAPVNPPATIQLAAGKVVVIFHVLHGQRAVPGELPDELVELLEDDKLTKTGVGIKGDCTKLSNSYGVEVSRVVDLRSLAMERKVEVGL-RRGLADLCVHLLGRTLPKDSSVRISRWNTAELSQEQ 137
            V+GLDIEW  +     V+P A +QL  G   +IF  LH +  VP  L   L  L    + T  GVGIK D TKL + YG+ VSR+VDLR+LAMER         GL  L   LL R L K   + +SRW+   L+  Q
Sbjct:   44 VVGLDIEWRPNLEPGVVHPVAILQLCVGHSCLIFQFLHAE-CVPASLHAFLANL----RYTFVGVGIKDDATKLRDDYGLAVSRMVDLRALAMERLRNPSFGHMGLKKLVKVLLRRELEKPKEITLSRWDDEALTARQ 176          
BLAST of mRNA_P-littoralis_Contig714.14.1 vs. uniprot
Match: D7FIV2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV2_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 5.000e-20
Identity = 58/141 (41.13%), Postives = 77/141 (54.61%), Query Frame = 0
Query:    1 VIGLDIEWEISAAGAPVNPPATIQLAAGK-VVVIFHVLHG-QRAVPGELPDELVELLEDDKLTKTGVGIKGDCTKLSNSYGVEVSRVVDLRSLAMERKVEVGLRRGLADLCVHLLGRTLPKDSSVRISRWNTAELSQEQKR 139
            V+GLD EWE S  G   NP +T+QL+        F +  G ++      P  L  LLE+  + K GV I  D T L   YG+EV+  VDLR+ A +  VE    R LA +   LLGR LPKD  +R+SRW++  LS +Q R
Sbjct:  422 VLGLDCEWEPSLGGTTPNPVSTVQLSLPDGTAYCFQLQRGNKKTTSSNFPKALQNLLENPSIAKVGVNINSDATYLERDYGIEVANTVDLRTYARQCWVETP-SRSLAGMASSLLGRQLPKDPVIRLSRWSSP-LSDDQVR 560          
BLAST of mRNA_P-littoralis_Contig714.14.1 vs. uniprot
Match: A0A6H5JRJ6_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ6_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 4.430e-19
Identity = 57/139 (41.01%), Postives = 76/139 (54.68%), Query Frame = 0
Query:    1 VIGLDIEWEISAAGAPVNPPATIQLAAGK-VVVIFHVLHGQRAV-PGELPDELVELLEDDKLTKTGVGIKGDCTKLSNSYGVEVSRVVDLRSLAMERKVEVGLRRGLADLCVHLLGRTLPKDSSVRISRWNTAELSQEQ 137
            V+G+D EWE    G+      T+QLA       +FH+  G R   P      L  LL D  +TK GV +KGD ++L   YGVE   +VDLRS A    V++  R  LA +    LG++L K+ SVR SRW+ AEL+Q Q
Sbjct:   89 VLGMDCEWEPPFDGSSEGAVCTLQLALPDGTAYLFHLQRGTRRTRPSTFNRSLKVLLNDPTITKVGVAVKGDGSRLQRDYGVETCGMVDLRSYARTCWVDLPCR-SLAGMVATALGKSLSKNPSVRFSRWSQAELTQNQ 226          
BLAST of mRNA_P-littoralis_Contig714.14.1 vs. uniprot
Match: A0A059CJD2_EUCGR (3'-5' exonuclease domain-containing protein (Fragment) n=2 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059CJD2_EUCGR)

HSP 1 Score: 87.8 bits (216), Expect = 6.650e-19
Identity = 56/138 (40.58%), Postives = 76/138 (55.07%), Query Frame = 0
Query:    1 VIGLDIEWEISAAGAPVNPPATIQLAAGKVVVIFHVLHGQRAVPGELPDELVELLEDDKLTKTGVGIKGDCTKLSNSYGVEVSRVVDLRSLAMERKVEVGLR-RGLADLCVHLLGRTLPKDSSVRISRWNTAELSQEQ 137
            V+GLDIEW  +     V+P AT+QL  G+  +IF +LH +  +PG L   L  L      T  GVGIK D  KL + YG+ VSR+VDLR LA+ R   + L   GL  L   +L + L K   V +S+W+   L+  Q
Sbjct:   44 VVGLDIEWRPNLEPGVVHPVATLQLCVGRSCLIFQILHAEY-IPGSLHAFLGNL----NYTFVGVGIKDDAMKLRDDYGLTVSRMVDLRGLAVGRWRNLSLGYMGLKKLVKVILRKDLEKPKDVTLSQWDDKVLTDRQ 176          
BLAST of mRNA_P-littoralis_Contig714.14.1 vs. uniprot
Match: A0A6H5JCK3_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK3_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 4.850e-17
Identity = 51/141 (36.17%), Postives = 76/141 (53.90%), Query Frame = 0
Query:    1 VIGLDIEWEISAAGAPVNPPATIQLAAGKVVVIFHVLH---GQRAVPGELPDELVELLEDDKLTK-TGVGIKGDCTKLSNSYGVEVSRVVDLRSLAMERKVEVGLRRGLADLCVHLLGRTLPKDSSVRISRWNTAELSQEQ 137
            V+GLD EWE +  GA  NP +T+QL+          LH    +      +P  L  LLE+    +  GV +  D + L   YGV+V+ ++D+R+ A E  VE    R LA +   L+G+ LPKD ++R+SRW+   L+ EQ
Sbjct:  154 VLGLDCEWEPALGGATPNPVSTLQLSLPDGTAYCFHLHRRTNRATATSTIPKVLQSLLENVPSQRYVGVNVNSDASLLERYYGVKVANMIDVRTHARECWVETS-SRSLAGMASSLVGKALPKDPTIRLSRWSNPSLTDEQ 293          
BLAST of mRNA_P-littoralis_Contig714.14.1 vs. uniprot
Match: A0A7J7HIL9_CAMSI (3'-5' exonuclease domain-containing protein n=1 Tax=Camellia sinensis TaxID=4442 RepID=A0A7J7HIL9_CAMSI)

HSP 1 Score: 82.4 bits (202), Expect = 9.910e-17
Identity = 48/137 (35.04%), Postives = 72/137 (52.55%), Query Frame = 0
Query:    1 VIGLDIEWEISAAGAPVNPPATIQLAAGKVVVIFHVLHGQRAVPGELPDELVELLEDDKLTKTGVGIKGDCTKLSNSYGVEVSRVVDLRSLAMERKVEVGLRRGLADLCVHLLGRTLPKDSSVRISRWNTAELSQEQ 137
            ++GLDIEW  +   +  NP AT+QL  G+  +IF +L+       E+P  L++ L +   T  GVGI  D  KL   YG+ V+  VDLR+LA +  +      GL  +   +LG+ + K   +  SRW+   L  EQ
Sbjct:   62 IVGLDIEWRPNDRYSD-NPAATLQLCVGRRCLIFQLLYSP-----EIPQSLIDFLNNPIYTFVGVGINSDVEKLIEDYGLSVATTVDLRTLAADCGMTELRNAGLKTMAREVLGKVIEKPQRITRSRWDNEWLYPEQ 192          
BLAST of mRNA_P-littoralis_Contig714.14.1 vs. uniprot
Match: A0A4S4EXV1_CAMSI (3'-5' exonuclease domain-containing protein n=3 Tax=Camellia sinensis TaxID=4442 RepID=A0A4S4EXV1_CAMSI)

HSP 1 Score: 82.4 bits (202), Expect = 1.160e-16
Identity = 48/137 (35.04%), Postives = 72/137 (52.55%), Query Frame = 0
Query:    1 VIGLDIEWEISAAGAPVNPPATIQLAAGKVVVIFHVLHGQRAVPGELPDELVELLEDDKLTKTGVGIKGDCTKLSNSYGVEVSRVVDLRSLAMERKVEVGLRRGLADLCVHLLGRTLPKDSSVRISRWNTAELSQEQ 137
            ++GLDIEW  +   +  NP AT+QL  G+  +IF +L+       E+P  L++ L +   T  GVGI  D  KL   YG+ V+  VDLR+LA +  +      GL  +   +LG+ + K   +  SRW+   L  EQ
Sbjct:   62 IVGLDIEWRPNDRYSD-NPAATLQLCVGRRCLIFQLLYSP-----EIPQSLIDFLNNPIYTFVGVGINSDVEKLIEDYGLSVATTVDLRTLAADCGMTELRNAGLKTMAREVLGKVIEKPQRITRSRWDNEWLYPEQ 192          
BLAST of mRNA_P-littoralis_Contig714.14.1 vs. uniprot
Match: A0A059CK88_EUCGR (3'-5' exonuclease domain-containing protein n=2 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059CK88_EUCGR)

HSP 1 Score: 80.5 bits (197), Expect = 4.630e-16
Identity = 52/138 (37.68%), Postives = 72/138 (52.17%), Query Frame = 0
Query:    1 VIGLDIEWEISAAGAPVNPPATIQLAAGKVVVIFHVLHGQRAVPGELPDELVELLEDDKLTKTGVGIKGDCTKLSNSYGVEVSRVVDLRSLAMERKVEVGLR-RGLADLCVHLLGRTLPKDSSVRISRWNTAELSQEQ 137
            V+GLDIEW  +     V+P AT+QL      +IF +LH +      +P  L   L +   T  GVGIK D  KLS+ +G+ VSR+VDLR LA+ R     L   GL  L   +L + L K   + +S W+   L+  Q
Sbjct:   44 VVGLDIEWRPNLEPGVVHPVATLQLCVAHSCLIFQILHAEY-----VPASLHAFLGNLDYTFVGVGIKDDAMKLSDDFGLVVSRMVDLRGLAVGRWRNPSLGYMGLKKLVKVVLRKDLEKPKEITLSHWDEKTLTAPQ 176          
BLAST of mRNA_P-littoralis_Contig714.14.1 vs. uniprot
Match: A0A6H5K9Q9_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Q9_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 6.150e-15
Identity = 45/97 (46.39%), Postives = 55/97 (56.70%), Query Frame = 0
Query:   41 RAVPGELPDELVELLEDDKLTKTGVGIKGDCTKLSNSYGVEVSRVVDLRSLAMERKVEVGLRRGLADLCVHLLGRTLPKDSSVRISRWNTAELSQEQ 137
            +      P  L  LLED  + K GV I  D T L   YGVEV+  VDLR+ A +  VE   R  LA +  HLLGR LPKD  VR+SRW+ A L+ +Q
Sbjct:   84 KTTASSFPKALQNLLEDPSIAKVGVNINSDATYLEQDYGVEVANTVDLRTCARQSWVETPCR-SLAGMTSHLLGRQLPKDPVVRLSRWS-APLADKQ 178          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig714.14.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JET4_9PHAE1.420e-6578.423'-5' exonuclease domain-containing protein n=1 Ta... [more]
UPI0011D1BD432.990e-2042.75Werner Syndrome-like exonuclease n=2 Tax=Syzygium ... [more]
D7FIV2_ECTSI5.000e-2041.133'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5JRJ6_9PHAE4.430e-1941.013'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A059CJD2_EUCGR6.650e-1940.583'-5' exonuclease domain-containing protein (Fragm... [more]
A0A6H5JCK3_9PHAE4.850e-1736.173'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A7J7HIL9_CAMSI9.910e-1735.043'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A4S4EXV1_CAMSI1.160e-1635.043'-5' exonuclease domain-containing protein n=3 Ta... [more]
A0A059CK88_EUCGR4.630e-1637.683'-5' exonuclease domain-containing protein n=2 Ta... [more]
A0A6H5K9Q9_9PHAE6.150e-1546.393'-5' exonuclease domain-containing protein n=1 Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..139
e-value: 2.5E-37
score: 130.3
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 2..138
e-value: 5.0E-11
score: 42.7
NoneNo IPR availablePANTHERPTHR13620:SF65OS01G0660800 PROTEINcoord: 1..137
NoneNo IPR availablePANTHERPTHR136203-5 EXONUCLEASEcoord: 1..137
NoneNo IPR availableCDDcd06141WRN_exocoord: 1..139
e-value: 5.48786E-47
score: 147.725
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig714contigP-littoralis_Contig714:138752..139171 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig714.14.1mRNA_P-littoralis_Contig714.14.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig714 138752..139171 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig714.14.1 ID=prot_P-littoralis_Contig714.14.1|Name=mRNA_P-littoralis_Contig714.14.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=140bp
VIGLDIEWEISAAGAPVNPPATIQLAAGKVVVIFHVLHGQRAVPGELPDE
LVELLEDDKLTKTGVGIKGDCTKLSNSYGVEVSRVVDLRSLAMERKVEVG
LRRGLADLCVHLLGRTLPKDSSVRISRWNTAELSQEQKR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR0025623'-5'_exonuclease_dom
IPR012337RNaseH-like_sf