prot_P-littoralis_Contig118.91.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig118.91.2
Unique Nameprot_P-littoralis_Contig118.91.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length227
Homology
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BLAST of mRNA_P-littoralis_Contig118.91.2 vs. uniprot
Match: A0A6H5KKS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKS0_9PHAE)

HSP 1 Score: 384 bits (986), Expect = 8.130e-134
Identity = 188/227 (82.82%), Postives = 204/227 (89.87%), Query Frame = 0 
Query:    1 MYATSLPPRPNPHARTAENYAPRFSPDELPLLPANWIPSWRSPPSKIWGD-VGVKRSDNGATAAAASYASAATSAARPQTTGSILFVKDSAAREMWGSLRENCTGRLHSVPTHNISDRSIDSGLIPRHLLDGSVPPPVGKRASSLDYFPPCERPQTVPAIRMGHQFSRLLRDTSTKRLDTYKRGGVLRDGPVRIVRHTSKDRTYMKKSSHRNPRSISRNVLGGFCTS 226
            MYATSLPPRPNPHARTAENYAPRFSPDELPLLP NW+PSWRSPPSKIW D  GVKR +NGAT AA  Y S + +AARP+TTGSI FV+DS+AREMWG+LR+NCTGRLH+V THNISDRSIDSGLIP HLLDGSVPPP GKRA+SLDYFPPC RP TVPAIRMGHQ+ RL+RDT  KRL+ YKRG VLRDGPVRIVRHTSKDRT+MKKS+HRNPR ISRNVLGGFCTS
Sbjct:    1 MYATSLPPRPNPHARTAENYAPRFSPDELPLLPVNWVPSWRSPPSKIWEDPAGVKRGENGATTAATCYVSESAAAARPRTTGSIGFVRDSSAREMWGTLRDNCTGRLHAVQTHNISDRSIDSGLIPPHLLDGSVPPPQGKRATSLDYFPPCVRPATVPAIRMGHQY-RLIRDTPAKRLEAYKRGAVLRDGPVRIVRHTSKDRTFMKKSAHRNPRGISRNVLGGFCTS 226
[Close]
BLAST of mRNA_P-littoralis_Contig118.91.2 vs. uniprot
Match: D8LIB8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB8_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 2.300e-57
Identity = 99/148 (66.89%), Postives = 105/148 (70.95%), Query Frame = 0 
Query:  111 THNISDRSIDSGLIPRHLLDGSVPPPVGKRASSLDYFPPCERPQTVPAIRMGHQFSRLLRDTSTKRLDTYKRGGVLRDGPVRIVR--------------------------------HTSKDRTYMKKSSHRNPRSISRNVLGGFCTS 226
            THNISDRSIDSGLIP HLLDGSVPPP GKRA+SLDYFPPC RP TVPAIRMGHQ+ RL+RDT  KRL+ YKRG VLRDGPVRIV                                 HTSKDRT+MKKS+HRNPR ISRNVLGGFCTS
Sbjct:    4 THNISDRSIDSGLIPPHLLDGSVPPPQGKRATSLDYFPPCVRPATVPAIRMGHQY-RLIRDTPAKRLEAYKRGAVLRDGPVRIVSADYHWLHAICGQQPRPLPTGNDQQSESGSIPLHTSKDRTFMKKSAHRNPRGISRNVLGGFCTS 150
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig118.91.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KKS0_9PHAE8.130e-13482.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIB8_ECTSI2.300e-5766.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig118contigP-littoralis_Contig118:409423..414356 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig118.91.2mRNA_P-littoralis_Contig118.91.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig118 409387..416291 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig118.91.2 ID=prot_P-littoralis_Contig118.91.2|Name=mRNA_P-littoralis_Contig118.91.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=227bp
MYATSLPPRPNPHARTAENYAPRFSPDELPLLPANWIPSWRSPPSKIWGD
VGVKRSDNGATAAAASYASAATSAARPQTTGSILFVKDSAAREMWGSLRE
NCTGRLHSVPTHNISDRSIDSGLIPRHLLDGSVPPPVGKRASSLDYFPPC
ERPQTVPAIRMGHQFSRLLRDTSTKRLDTYKRGGVLRDGPVRIVRHTSKD
RTYMKKSSHRNPRSISRNVLGGFCTS*
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