prot_P-littoralis_Contig714.6.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig714.6.1
Unique Nameprot_P-littoralis_Contig714.6.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length64
Homology
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BLAST of mRNA_P-littoralis_Contig714.6.1 vs. uniprot
Match: A0A6H5JGN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGN3_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 7.470e-7
Identity = 25/62 (40.32%), Postives = 42/62 (67.74%), Query Frame = 0 
Query:    1 GFTAGEIREARLAWTFLDESLKKEEDRAVLQRCKSPREAFDYLEQFYDPESEIATQRLYEKF 62
            G +  +I  +  A+ FL  +L +E D+AV +RC +P++A D L++ ++PES++ATQ L  KF
Sbjct:  198 GNSEAQIHRSLQAFHFLSSALVREPDKAVFERCVTPKQALDELDKVHNPESQVATQELLSKF 259
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig714.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JGN3_9PHAE7.470e-740.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig714contigP-littoralis_Contig714:75462..75653 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig714.6.1mRNA_P-littoralis_Contig714.6.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig714 75462..75655 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig714.6.1 ID=prot_P-littoralis_Contig714.6.1|Name=mRNA_P-littoralis_Contig714.6.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=64bp
GFTAGEIREARLAWTFLDESLKKEEDRAVLQRCKSPREAFDYLEQFYDPE
SEIATQRLYEKFHQ
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