prot_P-littoralis_Contig713.27.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig713.27.1
Unique Nameprot_P-littoralis_Contig713.27.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length112
Homology
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BLAST of mRNA_P-littoralis_Contig713.27.1 vs. uniprot
Match: D7G4Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Z8_ECTSI)

HSP 1 Score: 227 bits (579), Expect = 1.800e-68
Identity = 108/112 (96.43%), Postives = 109/112 (97.32%), Query Frame = 0 
Query:    1 MNTLSKASPLKRKQQQASAPIVKPRALLTLGVEGWPCPDDKCTDGLLKVVKKKNGGDFLTCDQNNWKDETSCKVSLSLLKPSKDHPHECSLCLKDVGGTPSLGTDTGETDSR 112
            MNTLSKASPLKRKQQQASAPIVKPRALLTLGVEGWPCPDD  TDGLLKVVKKKNGGDFLTCDQN WKDETSCKVSLSLLKPS+DHPHECSLCLKDVGGTPSLGTDTGETDSR
Sbjct:  624 MNTLSKASPLKRKQQQASAPIVKPRALLTLGVEGWPCPDDNSTDGLLKVVKKKNGGDFLTCDQNIWKDETSCKVSLSLLKPSQDHPHECSLCLKDVGGTPSLGTDTGETDSR 735
[Close]
BLAST of mRNA_P-littoralis_Contig713.27.1 vs. uniprot
Match: D8LU62_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU62_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 2.270e-24
Identity = 54/114 (47.37%), Postives = 71/114 (62.28%), Query Frame = 0 
Query:    1 MNTLSKASPLKRK-QQQASAPIVKPRALLTLGVE-----GWPCPD-DKCTDGLLKVVKKKNGGDFLTCDQNNWKDETSCKVSLSLLKPSKDHPHECSLCLKDVGGTPSLGTDTG 107
            M+ L   SPLKRK + +A+A           G        WPC   D C DG LK+V KK+GG F+ CD+N   D+T+C V+LSLL+ S  HP +CSLCL+DVGG+PS+G+ TG
Sbjct:   59 MDLLKTLSPLKRKIETEAAAXXXXXXXXXXSGSSEPGNPSWPCVGFDGCPDGRLKIVPKKDGGFFVVCDKNVHGDDTTCSVTLSLLRESTKHPKKCSLCLRDVGGSPSIGSKTG 172
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig713.27.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4Z8_ECTSI1.800e-6896.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LU62_ECTSI2.270e-2447.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig713contigP-littoralis_Contig713:60269..60604 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig713.27.1mRNA_P-littoralis_Contig713.27.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig713 59841..60604 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig713.27.1 ID=prot_P-littoralis_Contig713.27.1|Name=mRNA_P-littoralis_Contig713.27.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=112bp
MNTLSKASPLKRKQQQASAPIVKPRALLTLGVEGWPCPDDKCTDGLLKVV
KKKNGGDFLTCDQNNWKDETSCKVSLSLLKPSKDHPHECSLCLKDVGGTP
SLGTDTGETDSR
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