prot_P-littoralis_Contig713.2.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig713.2.3
Unique Nameprot_P-littoralis_Contig713.2.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length842
Homology
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BLAST of mRNA_P-littoralis_Contig713.2.3 vs. uniprot
Match: A0A6H5JPW3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPW3_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 1.480e-29
Identity = 62/91 (68.13%), Postives = 73/91 (80.22%), Query Frame = 0 
Query:   28 KVRRQHLESLFIVYQAKILHALDRDRWTKLLCTTISSLLSVIPLQSLTKRARLGVVMCIVGSGRTHLFSPTVLAVLACDWFEDWASFKLIQ 118
            ++RRQ LE LF V+QAK+LH LDR RWT +L TT++SLLS  PLQ LTK  RL V+MCIVGSGR  LFSP VLAVLACDW +D+ SFKL+Q
Sbjct:   71 QMRRQELEELFTVWQAKLLHPLDRSRWTNVLNTTVASLLSAQPLQCLTKSGRLAVMMCIVGSGRAGLFSPAVLAVLACDWVDDYGSFKLLQ 161
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig713.2.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JPW3_9PHAE1.480e-2968.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.140coord: 333..384
e-value: 6.4E-6
score: 28.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 416..446
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 256..325
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 275..304
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 306..325
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 611..629
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 421..446
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 775..800
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 783..797
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 642..670
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 599..716
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 694..716

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig713contigP-littoralis_Contig713:1010..12719 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig713.2.3mRNA_P-littoralis_Contig713.2.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig713 804..12775 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig713.2.3 ID=prot_P-littoralis_Contig713.2.3|Name=mRNA_P-littoralis_Contig713.2.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=842bp
MEGARGHVQPAGSGGFPRLTNAGVAKTKVRRQHLESLFIVYQAKILHALD
RDRWTKLLCTTISSLLSVIPLQSLTKRARLGVVMCIVGSGRTHLFSPTVL
AVLACDWFEDWASFKLIQDTVRQASLSRLRSECGSTGLPSEWSRKKMASF
LEEGVENTIVGSWRALGLTGAARERVEKTGRELRGVAARCLGASDRPSAR
KLLICFLDSNRIEGFIQALISWGQEQLRASKSTIFDEAFPFLETRQLQAS
RLRADQRAAGDLGNDVGTESDGHLATKGTGESTNTPWSSSPAACMTNPAD
TQAENSRWGEGKEASIDGSRKRRKLGPLRMDERVFKGVAGGATSMWRRGA
IEDCRGDGTYNIRYDDGEVEPLVRRADIFEVQGSDLPQETLTPPEVSRRR
FDIHDISARRSHIKTKRTLSRGSVGDVSPLSASPKSSPVCDEHASESASR
TIQDENEFWFAADADDIGDVQLVAPGSLRRLTERGHQKRRVIQDECDQPV
SSSHEDDGPSCDAAARDCPVSLVANQELENTQLLLWTEQDISEEVADSQV
GHRAEGGKDSLQDKEGFCRGLNQREADLAADCNGRCVCNNEERGSCGVGR
EEDEVETDEELSEETRGKAREEKGEAGIGQEVETRTGNGKGGPEESLEEE
GKGESEDPHDEGKDADNRADDIGPFASAMPSTPPVNQTLIPEKQGEMRSK
KGQLRGPNRERKISEYQQNDIYSGKAVSSSVTVQQPILSGADGGQAEVDT
PTPILRVPPTIQDMSMELVAQLDDPRSNHCQQQNDAGRRDETRNASLVDD
NMVDTQTPSRPTHHMRVYGSTGFTRVRQSLGAWFSQRKDIL*
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