prot_P-littoralis_Contig712.24.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig712.24.2
Unique Nameprot_P-littoralis_Contig712.24.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length379
Homology
BLAST of mRNA_P-littoralis_Contig712.24.2 vs. uniprot
Match: A0A6H5L1H9_9PHAE (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1H9_9PHAE)

HSP 1 Score: 349 bits (895), Expect = 1.960e-115
Identity = 215/410 (52.44%), Postives = 249/410 (60.73%), Query Frame = 0
Query:    1 MDGLPLDVILLVSVGLVAAVSLVAYISRKMLSNNQ--EGRPTGGEDASGSGNASS-GRLARHPGGECPICLSVEVETPLQTNCGHWFCARCILDYYDGVGRVRIKCPLCRQEVTMLHGVAEDVAVAPTAPVXXXXXXXXXXXXXXXSETAAGEVGAATTVPXXXXXXPAVATPLGSPETQDQIARFNERNSGRRRSPWQVIEDAPLLLRRLWADLRRGDTQVFGALIRRGVQLQLFVAALYILSPVDVMPEGLLGIAGLVDDLIVVIVLLLHITTVYRTILLTWERSRIARTAA---------------------------AAVASAPSGEATSPAAAAVPGEGSSTSSQMGAGLAAXXXXXXXXXXTFAGASXXXXXXXXXXXXVVTAASVD--SSSNARATPPLAGDW 378
            M+GLPLDVILLVS+G+VA  SLV YISRK+ SN++  EG  TG     GS N ++ GRLARHPGGECPICLS+EVETP+QTNCGHWFCARCIL YYD  GRVRI+CP+CRQEVTMLHG A D   A                     +  A    AATT               GSPE Q++I+RFN+RNSGR RSPWQVIEDAPLLLRRLW+DL RGDT+VFG L+RRGVQLQLFVAALYILSP+DV+PE L+GIAGL+DDL+VV+ LLLH+T+VYRT+LL+WERSR AR                              AAVAS               GEG   +S  GAG+AA            AG                 AA+ +   S   R  PPLAGDW
Sbjct:    1 MEGLPLDVILLVSIGIVAVTSLVVYISRKLTSNDEDEEGAATG---IDGSNNDTTPGRLARHPGGECPICLSIEVETPVQTNCGHWFCARCILSYYDQGGRVRIRCPMCRQEVTMLHGAAGDAQAA--------------GDTDQAHDARAESAPAATT---------------GSPEIQEEISRFNDRNSGRWRSPWQVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVLLSWERSRAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAVAS---------------GEGRFDNSPQGAGIAAVLALLVGALLALAGGGEGQTALGAGAMGAAVAAAAERYGSRAPRVMPPLAGDW 363          
BLAST of mRNA_P-littoralis_Contig712.24.2 vs. uniprot
Match: D7FX72_ECTSI (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX72_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 2.670e-61
Identity = 136/287 (47.39%), Postives = 160/287 (55.75%), Query Frame = 0
Query:  105 LCRQEVTMLHGVAEDVAVAPTAPVXXXXXXXXXXXXXXXSETAAGEVGAATTVPXXXXXXPAVATPLGSPETQDQIARFNERNSGRRRSPWQVIEDAPLLLRRLWADLRRGDTQVFGALIRRGVQLQLFVAALYILSPVDVMPEGLLGIAGLVDDLIVVIVLLLHITTVYRTILLTWERSRIARTAAAAVASAPSGEATS-----------PAAAAVPGEGSSTSSQMGAGLAAXXXXXXXXXXTFAGASXXXXXXXXXXXXVVTAASVD--SSSNARATPPLAGDW 378
            +CRQEVTML+G A D   A                     +  AG   A TT               GSPE Q++I+RFN+RNSGR RSPWQVIEDAPLLLRRLW+DL RGDT+VFG L+RRGVQLQLFVAALYILSP+DV+PE L+GIAGL+DDL+VV+ LLLH+T+VYRT+LL+WERSR AR                           P AA   GEG   +S  GAG+AA            AG                 AA+ +   S   RA PPLAGDW
Sbjct:    1 MCRQEVTMLYGAAGDAQAA--------------GDTDEAHDARAGSAPATTT---------------GSPEIQEEISRFNDRNSGRWRSPWQVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVLLSWERSRAARXXXXXXXXXXXXXXXXXXXXXXXXXXXPPAAVASGEGRFDNSPQGAGMAAVLALMVGALLALAGGGEGQTAMAAGAMGAAVAAAAERYGSRAPRAMPPLAGDW 258          
BLAST of mRNA_P-littoralis_Contig712.24.2 vs. uniprot
Match: A0A2Z7CY40_9LAMI (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7CY40_9LAMI)

HSP 1 Score: 113 bits (283), Expect = 2.390e-26
Identity = 74/217 (34.10%), Postives = 105/217 (48.39%), Query Frame = 0
Query:   64 CPICLSVEVETPLQTNCGHWFCARCILDYYD-GVGRVRIKCPLCRQEVTMLHGVAEDVAVAPTAPVXXXXXXXXXXXXXXXSETAAGEVGAATTVPXXXXXXPAVATPLGSPETQDQIARFNERNSGRRRSPWQVIEDAPLLLRRLWADLRRGDTQVFGALIRRGVQLQLFVAALYILSPVDVMPEGLLGIAGLVDDLIVVIVLLLHITTVYRTILL 279
            C IC S     P Q NC HWFC  CIL  ++ G      KCPLCR+E+T+L                              SE ++ +     T                  E    I R+N +   R     Q ++D P LLRRL  D+R    +    +IR  V L + V+A+Y+LSPVD++PEGLLG+ GL+DDLI+V++ +LH+ ++YR +LL
Sbjct:   10 CSICHS-NFNIPCQANCSHWFCGGCILQVWEHGAALHPCKCPLCRREITLL----------------------------VPSEASSRQSHMVNTA-----------------EILRSIERYNRQYGERSNGVMQRVQDLPFLLRRLLRDIR-DPQRTLPVVIRARVYLAMVVSAIYVLSPVDIIPEGLLGVIGLLDDLIIVLICVLHVASLYRAVLL 179          
BLAST of mRNA_P-littoralis_Contig712.24.2 vs. uniprot
Match: UPI0020095D38 (E3 ubiquitin-protein ligase RNF170-like n=3 Tax=Salvia TaxID=21880 RepID=UPI0020095D38)

HSP 1 Score: 105 bits (263), Expect = 1.600e-23
Identity = 74/217 (34.10%), Postives = 101/217 (46.54%), Query Frame = 0
Query:   63 ECPICLSVEVETPLQTNCGHWFCARCILDYYDGVGRVR-IKCPLCRQEVTMLHGVAEDVAVAPTAPVXXXXXXXXXXXXXXXSETAAGEVGAATTVPXXXXXXPAVATPLGSPETQDQIARFNERNSGRRRSPWQVIEDAPLLLRRLWADLRRGDTQVFGALIRRGVQLQLFVAALYILSPVDVMPEGLLGIAGLVDDLIVVIVLLLHITTVYRTIL 278
            EC IC     + P Q NCGHWFC RCIL  +D    +R  KCPLCR+E+T+L                              SE      GA                     E   +I  +N +      S  Q + D P LLRRL  D+     +    ++R  V L + ++A+Y+LSPVD++PE LLGI GL+DDLIVV +  L++  +YRT+L
Sbjct:    9 ECSICQQ-NFQIPCQANCGHWFCGRCILQVWDFGHALRPCKCPLCRREITLL----------------------------VPSEAHRTADGA---------------------EILQRIEHYNRQFGAHPNSLMQRMYDLPFLLRRLTRDIM-DPQRALPLVVRARVYLAMILSAMYVLSPVDIIPEALLGIIGLLDDLIVVFMCFLYVAALYRTVL 174          
BLAST of mRNA_P-littoralis_Contig712.24.2 vs. uniprot
Match: A0A834X1P6_9FABA (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834X1P6_9FABA)

HSP 1 Score: 105 bits (261), Expect = 3.420e-23
Identity = 73/216 (33.80%), Postives = 107/216 (49.54%), Query Frame = 0
Query:   64 CPICLSVEVETPLQTNCGHWFCARCI-LDYYDGVGRVRIKCPLCRQEVTMLHGVAEDVAVAPTAPVXXXXXXXXXXXXXXXSETAAGEVGAATTVPXXXXXXPAVATPLGSPETQDQIARFNERNSGRRRSPWQVIEDAPLLLRRLWADLRRGDTQVFGALIRRGVQLQLFVAALYILSPVDVMPEGLLGIAGLVDDLIVVIVLLLHITTVYRTIL 278
            C +C      TP Q NC HWFC  CI L ++ G      KCPLCR+++T+L          PT                   E + G+              P VA  LG+ ET      +N    GR     Q ++D P LLRRL  +L     +    +IR  V + + ++A+YI+SPVD++PEG+LGI GL+DDL++V++  LH+  +YR++L
Sbjct:   10 CSVCHG-SFTTPCQANCSHWFCGNCIMLVWHHGSAVQPCKCPLCRRQITLL---------VPT-------------------EDSLGQ-----------RHDPEVARVLGNIET------YNRLFGGRETGLVQRMQDLPFLLRRLLRELM-DPHRTLPLVIRARVYIAMILSAVYIISPVDIIPEGILGIVGLLDDLLIVLICFLHVAALYRSVL 178          
BLAST of mRNA_P-littoralis_Contig712.24.2 vs. uniprot
Match: UPI001FB083FF (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB083FF)

HSP 1 Score: 104 bits (259), Expect = 6.600e-23
Identity = 70/216 (32.41%), Postives = 101/216 (46.76%), Query Frame = 0
Query:   64 CPICLSVEVETPLQTNCGHWFCARCILDYYD-GVGRVRIKCPLCRQEVTMLHGVAEDVAVAPTAPVXXXXXXXXXXXXXXXSETAAGEVGAATTVPXXXXXXPAVATPLGSPETQDQIARFNERNSGRRRSPWQVIEDAPLLLRRLWADLRRGDTQVFGALIRRGVQLQLFVAALYILSPVDVMPEGLLGIAGLVDDLIVVIVLLLHITTVYRTIL 278
            C IC +    TP Q NC HWFC RCIL  +D G      KCPLCR+E+T+L                              S  ++ E  ++                    E   +I R+N     +  S  Q ++D P LLRRL  DL      +   ++R  V L + V+ +YI+SPVD++PEG+LGI GL+DD I+ ++  LH+  +YR+ L
Sbjct:   10 CSICHN-NFTTPCQANCSHWFCGRCILQVWDHGSSFQPCKCPLCRREITLL----------------------------IPSRASSNECNSSEVA-----------------EVFGRIERYNRHFGQQTNSLVQRMQDLPFLLRRLTRDLMNPQRSL-PFVLRMRVYLAMLVSVIYIISPVDIIPEGILGIIGLLDDAIIALICFLHVAALYRSAL 178          
BLAST of mRNA_P-littoralis_Contig712.24.2 vs. uniprot
Match: A0A5B7BU90_DAVIN (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7BU90_DAVIN)

HSP 1 Score: 103 bits (256), Expect = 1.770e-22
Identity = 72/221 (32.58%), Postives = 107/221 (48.42%), Query Frame = 0
Query:   60 PGGECPICLSVEVETPLQTNCGHWFCARCILDYYD-GVGRVRIKCPLCRQEVTMLHGVAEDVAVAPTAPVXXXXXXXXXXXXXXXSETAAGEVGAATTVPXXXXXXPAVATPLGSPETQDQIARFNERNSGRRRSPWQVIEDAPLLLRRLWADLRRGDTQVFGALIRRGVQLQLFVAALYILSPVDVMPEGLLGIAGLVDDLIVVIVLLLHITTVYRTILL 279
            PG +C          P Q NC HWFC  CIL  ++ G      +CPLCR+++T+L                              SE ++ +              P VA  LG  ET ++   F ER  G      Q +ED P LLRRL  +L      +   ++R  + L + V+A+YI+SPVD++PEG+LGI GL+DD+I+ ++  LH+  +YR++LL
Sbjct:    5 PGNDCCSICHGNFHIPCQANCSHWFCGNCILQVWNHGSVLQPCRCPLCRRQITLL----------------------------IPSEASSQQ-----------RQNPEVAETLGKVETYNRY--FGERADGL----IQRLEDLPFLLRRLLRELMDPQRSL-PLVLRARIYLAMAVSAIYIVSPVDIIPEGVLGIIGLLDDIIIALICFLHVAALYRSVLL 179          
BLAST of mRNA_P-littoralis_Contig712.24.2 vs. uniprot
Match: A0A1S3YLS3_TOBAC (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Nicotiana tabacum TaxID=4097 RepID=A0A1S3YLS3_TOBAC)

HSP 1 Score: 103 bits (256), Expect = 1.770e-22
Identity = 71/217 (32.72%), Postives = 102/217 (47.00%), Query Frame = 0
Query:   64 CPICLSVEVETPLQTNCGHWFCARCILDYYD-GVGRVRIKCPLCRQEVTMLHGVAEDVAVAPTAPVXXXXXXXXXXXXXXXSETAAGEVGAATTVPXXXXXXPAVATPLGSPETQDQIARFNERNSGRRRSPWQVIEDAPLLLRRLWADLRRGDTQVFGALIRRGVQLQLFVAALYILSPVDVMPEGLLGIAGLVDDLIVVIVLLLHITTVYRTILL 279
            C IC       P Q+NC HWFCA CIL  +D G      KCPLCR+ +T+L                              S++A+                P V      PE   +I  +N        S +Q + D P LLRRL  D+      +   +IR  V L + ++ +Y+LSPVD++PEG+LGI GL+DDLI++ +  LH+  +YR++LL
Sbjct:   10 CSICHG-NFHVPCQSNCSHWFCANCILQVWDHGSALQACKCPLCRRPITLL----------------------------VPSDSAS-----------RLHRDPVV------PEVLRRIEHYNRHFGQHNSSLFQRVRDLPFLLRRLLRDMTDPQRSL-PFVIRARVYLAVILSGIYVLSPVDIIPEGILGIIGLLDDLIIMFICFLHVAALYRSVLL 179          
BLAST of mRNA_P-littoralis_Contig712.24.2 vs. uniprot
Match: A0A0K9RRI5_SPIOL (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9RRI5_SPIOL)

HSP 1 Score: 103 bits (256), Expect = 1.810e-22
Identity = 69/216 (31.94%), Postives = 101/216 (46.76%), Query Frame = 0
Query:   64 CPICLSVEVETPLQTNCGHWFCARCILDYYDGVGRVR-IKCPLCRQEVTMLHGVAEDVAVAPTAPVXXXXXXXXXXXXXXXSETAAGEVGAATTVPXXXXXXPAVATPLGSPETQDQIARFNERNSGRRRSPWQVIEDAPLLLRRLWADLRRGDTQVFGALIRRGVQLQLFVAALYILSPVDVMPEGLLGIAGLVDDLIVVIVLLLHITTVYRTIL 278
            C IC     + P Q NC HWFC RCIL  +D    ++  +CPLCR+ + +L                                         T         P VA  LG      ++  +N R   R     Q + D P LLRRL  DL      +   +I+  + L +F +A+Y+LSPVD++PEG+LG+ GLVDDLI+V++ L+H+  +YR++L
Sbjct:   12 CTICHD-NFDIPCQANCSHWFCGRCILQVWDHAAALQPCRCPLCRRPINLL---------------------------------------IPTEASQQQRVNPEVANILG------RLEMYNRRYGERASDFMQRLRDLPFLLRRLLNDLLDPHRSL-PFVIKARIYLAVFFSAIYVLSPVDIIPEGVLGVIGLVDDLILVLICLVHVAALYRSVL 180          
BLAST of mRNA_P-littoralis_Contig712.24.2 vs. uniprot
Match: UPI00103644AE (E3 ubiquitin-protein ligase RNF170-like n=2 Tax=Camellia sinensis TaxID=4442 RepID=UPI00103644AE)

HSP 1 Score: 102 bits (254), Expect = 3.400e-22
Identity = 71/217 (32.72%), Postives = 107/217 (49.31%), Query Frame = 0
Query:   64 CPICLSVEVETPLQTNCGHWFCARCILDYYD-GVGRVRIKCPLCRQEVTMLHGVAEDVAVAPTAPVXXXXXXXXXXXXXXXSETAAGEVGAATTVPXXXXXXPAVATPLGSPETQDQIARFNERNSGRRRSPWQVIEDAPLLLRRLWADLRRGDTQVFGALIRRGVQLQLFVAALYILSPVDVMPEGLLGIAGLVDDLIVVIVLLLHITTVYRTILL 279
            C IC       P Q NC HWFC  CIL  ++ G      KCPLCR+++T+L  +  D +                        + A E+                   LG  E  ++   F ER++G      Q + D P LLRRL+ D+ +    +   +IR  V L +FV+A+YI+SPVD++PEG+LGI GL DD+++ ++  LH+  +YR++LL
Sbjct:   10 CSICHG-SFNLPCQANCSHWFCGNCILQVWNYGSALQPCKCPLCRRQITLL--IPSDAS------------------SRQRHNSDAAEI-------------------LGKIERYNRY--FGERSNGL----IQRLRDLPFLLRRLFRDIMQPQRSL-PLVIRARVYLAMFVSAIYIISPVDIIPEGILGIIGLFDDVLIALICFLHVAALYRSVLL 179          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig712.24.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L1H9_9PHAE1.960e-11552.44E3 ubiquitin-protein ligase RNF170 n=1 Tax=Ectocar... [more]
D7FX72_ECTSI2.670e-6147.39RING-type E3 ubiquitin transferase n=1 Tax=Ectocar... [more]
A0A2Z7CY40_9LAMI2.390e-2634.10E3 ubiquitin-protein ligase RNF170 n=1 Tax=Dorcoce... [more]
UPI0020095D381.600e-2334.10E3 ubiquitin-protein ligase RNF170-like n=3 Tax=Sa... [more]
A0A834X1P6_9FABA3.420e-2333.80E3 ubiquitin-protein ligase RNF170 n=1 Tax=Senna t... [more]
UPI001FB083FF6.600e-2332.41E3 ubiquitin-protein ligase RNF170 n=1 Tax=Impatie... [more]
A0A5B7BU90_DAVIN1.770e-2232.58E3 ubiquitin-protein ligase RNF170 n=1 Tax=Davidia... [more]
A0A1S3YLS3_TOBAC1.770e-2232.72E3 ubiquitin-protein ligase RNF170 n=1 Tax=Nicotia... [more]
A0A0K9RRI5_SPIOL1.810e-2231.94E3 ubiquitin-protein ligase RNF170 n=1 Tax=Spinaci... [more]
UPI00103644AE3.400e-2232.72E3 ubiquitin-protein ligase RNF170-like n=2 Tax=Ca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 64..106
e-value: 1.7E-8
score: 44.2
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 64..107
score: 12.415513
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 64..106
e-value: 1.5E-8
score: 34.4
IPR010652Domain of unknown function DUF1232PFAMPF06803DUF1232coord: 232..263
e-value: 1.6E-6
score: 27.8
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 54..147
e-value: 3.6E-13
score: 51.5
NoneNo IPR availablePANTHERPTHR22894:SF5E3 UBIQUITIN-PROTEIN LIGASE RNF170-LIKE PROTEIN (DUF 1232)coord: 175..278
NoneNo IPR availablePANTHERPTHR22894:SF5E3 UBIQUITIN-PROTEIN LIGASE RNF170-LIKE PROTEIN (DUF 1232)coord: 38..117
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 63..114
IPR038896E3 ubiquitin-protein ligase RNF170PANTHERPTHR22894UNCHARACTERIZEDcoord: 38..117
coord: 175..278
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 80..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig712contigP-littoralis_Contig712:108972..113571 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig712.24.2mRNA_P-littoralis_Contig712.24.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig712 107722..113643 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig712.24.2 ID=prot_P-littoralis_Contig712.24.2|Name=mRNA_P-littoralis_Contig712.24.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=379bp
MDGLPLDVILLVSVGLVAAVSLVAYISRKMLSNNQEGRPTGGEDASGSGN
ASSGRLARHPGGECPICLSVEVETPLQTNCGHWFCARCILDYYDGVGRVR
IKCPLCRQEVTMLHGVAEDVAVAPTAPVAAAAAAAAAAAAAAASETAAGE
VGAATTVPLAAPAAPAVATPLGSPETQDQIARFNERNSGRRRSPWQVIED
APLLLRRLWADLRRGDTQVFGALIRRGVQLQLFVAALYILSPVDVMPEGL
LGIAGLVDDLIVVIVLLLHITTVYRTILLTWERSRIARTAAAAVASAPSG
EATSPAAAAVPGEGSSTSSQMGAGLAAAGAVAAGSIATFAGASSGVASLT
AVAVGVVTAASVDSSSNARATPPLAGDW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR018957Znf_C3HC4_RING-type
IPR010652DUF1232
IPR013083Znf_RING/FYVE/PHD
IPR038896RNF170
IPR017907Znf_RING_CS