mRNA_P-littoralis_Contig712.23.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig712.23.2
Unique NamemRNA_P-littoralis_Contig712.23.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig712.23.2 vs. uniprot
Match: D7FX58_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX58_ECTSI)

HSP 1 Score: 300 bits (767), Expect = 1.130e-98
Identity = 147/159 (92.45%), Postives = 153/159 (96.23%), Query Frame = 1 
Query:  277 MFYLKELTKAMLIPPSDFGPKFKDTVRRKLIEEVEGTSIGSLGFVITVTHVKDEHIQMGTIEFDTGFANVLVAYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTVGAEL 753
            MFYLKEL + ML+PPSDFGPK KDT+RRKLIEEVEGTS+GSLGFVITVT+V D+ IQMGTIEFDTGFANVLV YRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTVGAEL
Sbjct:    1 MFYLKELRRPMLVPPSDFGPKLKDTIRRKLIEEVEGTSVGSLGFVITVTNVSDDQIQMGTIEFDTGFANVLVVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTVGAEL 159
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BLAST of mRNA_P-littoralis_Contig712.23.2 vs. uniprot
Match: A0A835YX29_9STRA (S1 motif domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX29_9STRA)

HSP 1 Score: 200 bits (509), Expect = 1.030e-59
Identity = 104/162 (64.20%), Postives = 125/162 (77.16%), Query Frame = 1 
Query:  277 MFYLKELTKAMLIPPSDFGPKFKDTVRRKLIEEVEGTSIGSLGFVITV--THVKDEHIQMGTIEFDTGFANVLVAYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAG-GYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTVGAEL 753
            MFYLK L K +L+ P  FGP   + V R L+E+VEG S+G+ GFVI+V   +  +  ++MGTIE+DTG AN++  Y AICFRPF NEVLDA VS+VT+LGFFAEVGPLE+FVSR  MP+DIA  GYD VGDMWVS ED + EIK GCGVRLRIIG+TV AEL
Sbjct:    1 MFYLKTLKKDLLLEPQFFGPNLHEVVGRLLLEQVEGMSLGNDGFVISVFSQNSANTSMEMGTIEYDTGAANIICTYEAICFRPFRNEVLDATVSNVTDLGFFAEVGPLEIFVSRFNMPEDIANTGYDSVGDMWVS-EDKEVEIKKGCGVRLRIIGITVEAEL 161
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BLAST of mRNA_P-littoralis_Contig712.23.2 vs. uniprot
Match: A0A6S9LV75_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9LV75_HETAK)

HSP 1 Score: 196 bits (499), Expect = 3.360e-58
Identity = 94/157 (59.87%), Postives = 122/157 (77.71%), Query Frame = 1 
Query:  277 MFYLKELTKAMLIPPSDFGPKFKDTVRRKLIEEVEGTSIGSLGFVITVTHVKDEHIQMGTIEFDTGFANVLVAYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTVGA 747
            MF+LK+LT+ + +PP+  GPK K+T+RR+LIEEVEG ++G LG+VITVT +KDE I  G IE+D+GF    V Y AICFRPF +EVLDA +S VTELGFFA+VGPL VFVSR  MP D+  GYDP  ++W  SED + E+++G GVRLRI+G++V A
Sbjct:    1 MFFLKQLTRELQLPPAFLGPKLKETIRRRLIEEVEGQAVGKLGYVITVTEMKDEAISQGLIEYDSGFVTFNVVYSAICFRPFRDEVLDATISSVTELGFFADVGPLTVFVSRHAMPADLQEGYDPARELW-QSEDREVELRAGAGVRLRIMGLSVDA 156
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BLAST of mRNA_P-littoralis_Contig712.23.2 vs. uniprot
Match: A0A7S2Y2T3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y2T3_9STRA)

HSP 1 Score: 187 bits (476), Expect = 9.270e-55
Identity = 92/157 (58.60%), Postives = 120/157 (76.43%), Query Frame = 1 
Query:  277 MFYLKELTKAMLIPPSDFGPKFKDTVRRKLIEEVEGTSIGSLGFVITVTHVKDEHIQMGTIEFDTGFANVLVAYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTVGA 747
            MF+LKELT+ +L+PP+  GPK K+T+RR+LIEEVEGT +G  G+VITVT VK+E ++ G I  + G     ++Y AICFRPF  EVLDA V+ VTELGFFAEVGPL+VFVSR  MP D+  G+D   ++WVS ED + E++ GCGVRLRI+G++V A
Sbjct:    1 MFFLKELTRELLLPPAYLGPKIKETIRRRLIEEVEGTCLGKYGYVITVTEVKEEGMKTGVISNEFGEVIFHISYDAICFRPFKGEVLDANVTVVTELGFFAEVGPLQVFVSRHAMPQDLQEGFDAANEVWVS-EDKEVELRQGCGVRLRIMGLSVDA 156
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BLAST of mRNA_P-littoralis_Contig712.23.2 vs. uniprot
Match: A0A225WVR4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WVR4_9STRA)

HSP 1 Score: 181 bits (459), Expect = 2.330e-52
Identity = 91/165 (55.15%), Postives = 122/165 (73.94%), Query Frame = 1 
Query:  277 MFYLKELTKAMLIPPSDFGPKFKDTVRRKLIEEVEGTSIGSLGFVITVTHVKDEHIQMGTIEFDTGFANVLVAYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTVGA-ELVREKR 768
            MF+LK+L++ +L+ P  FGPK  D +R +LIEEVEGTS+G  G+VITVT V+DE I  G I+ ++GF    + YRAI FRPF N+VLDA V+ V +LGFFA+VGPL+VFVSR  MP D+  GYD   + W+S +D + EI+ GCGVRL+I+GV+V   E+VR +R
Sbjct:    1 MFFLKQLSRDLLLHPMHFGPKLHDIIRLRLIEEVEGTSMGKYGYVITVTEVRDEDIGKGVIQDNSGFVCFNIRYRAILFRPFKNQVLDAVVTVVNQLGFFADVGPLQVFVSRHAMPTDLNNGYDHESNAWIS-DDREVEIRKGCGVRLKIMGVSVDVTEIVRTRR 164
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BLAST of mRNA_P-littoralis_Contig712.23.2 vs. uniprot
Match: K3XAJ8_GLOUD (Uncharacterized protein n=27 Tax=Oomycota TaxID=4762 RepID=K3XAJ8_GLOUD)

HSP 1 Score: 177 bits (450), Expect = 6.410e-51
Identity = 87/155 (56.13%), Postives = 116/155 (74.84%), Query Frame = 1 
Query:  277 MFYLKELTKAMLIPPSDFGPKFKDTVRRKLIEEVEGTSIGSLGFVITVTHVKDEHIQMGTIEFDTGFANVLVAYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTV 741
            MF+LK+L++ +L+ P  FGPK  D +R +LIEEVEGTS+G  G+VITVT V+DE I  G I+ ++GF    + YRAI FRPF N+VLDA V+ V +LGFFA+VGPL+VFVSR  MP D+  GYD   + W+S +D + EI+ GCGVRL+I+GV+V
Sbjct:    1 MFFLKQLSRDLLLHPMHFGPKLHDIIRLRLIEEVEGTSMGKYGYVITVTEVRDEDIGKGVIQDNSGFVCFNIRYRAILFRPFKNQVLDAVVTVVNQLGFFADVGPLQVFVSRHAMPTDLNNGYDHENNAWIS-DDREVEIRKGCGVRLKIMGVSV 154
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BLAST of mRNA_P-littoralis_Contig712.23.2 vs. uniprot
Match: A0A024TU38_9STRA (Uncharacterized protein n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TU38_9STRA)

HSP 1 Score: 171 bits (434), Expect = 1.500e-48
Identity = 86/155 (55.48%), Postives = 112/155 (72.26%), Query Frame = 1 
Query:  277 MFYLKELTKAMLIPPSDFGPKFKDTVRRKLIEEVEGTSIGSLGFVITVTHVKDEHIQMGTIEFDTGFANVLVAYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTV 741
            MF+LK+L + +L+ P  FGPK  D +R +LIEEVEGTS+G  G+VI VT V+DE I  G I+ ++GF    +AYRAI FRPF NEVLDA V+ V +LGFFAEVGPL+VFVSR  M  D+  GYD     W+S +D + EI+ G GVRL+I+GV++
Sbjct:    1 MFFLKQLKRELLLHPMHFGPKLHDIIRLRLIEEVEGTSLGKFGYVIAVTEVRDEDIGQGVIQDNSGFVCFNIAYRAILFRPFKNEVLDAVVTVVNQLGFFAEVGPLQVFVSRHAMSTDLNEGYDHEQSAWIS-QDREVEIRKGVGVRLKIMGVSI 154
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BLAST of mRNA_P-littoralis_Contig712.23.2 vs. uniprot
Match: A0A425DP05_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425DP05_9STRA)

HSP 1 Score: 170 bits (431), Expect = 2.100e-47
Identity = 85/155 (54.84%), Postives = 112/155 (72.26%), Query Frame = 1 
Query:  277 MFYLKELTKAMLIPPSDFGPKFKDTVRRKLIEEVEGTSIGSLGFVITVTHVKDEHIQMGTIEFDTGFANVLVAYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTV 741
            MF+LK+L + +L+ P  FGPK  D +R +LIEEVEGTS+G  G+VI VT V+DE I  G I+ ++G+    +AYRAI FRPF NEVLDA V+ V +LGFFAEVGPL+VFVSR  M  D+  GYD     W+S +D + EI+ G GVRL+I+GV++
Sbjct:    1 MFFLKQLKRELLLHPMHFGPKLHDIIRLRLIEEVEGTSLGKFGYVIAVTEVRDEDIGQGVIQDNSGYVCFNIAYRAILFRPFKNEVLDAVVTVVNQLGFFAEVGPLQVFVSRHAMSTDLNEGYDHEQSAWIS-QDREVEIRKGVGVRLKIMGVSI 154
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BLAST of mRNA_P-littoralis_Contig712.23.2 vs. uniprot
Match: A0A7S2HLJ0_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HLJ0_9STRA)

HSP 1 Score: 167 bits (424), Expect = 4.610e-47
Identity = 83/161 (51.55%), Postives = 112/161 (69.57%), Query Frame = 1 
Query:  277 MFYLKELTKAMLIPPSDFGPKFKDTVRRKLIEEVEGTSIGSLGFVITVTHVKDE-HIQMGTIEFDTGFANVLVAYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTVGAELV 756
            MF+ K+L   +LI P   GPK K T+RR+LI+E+EG+ I  +G+V+ VT + D   I+ G IE++TG  + +V Y A+ FRPF NEVLDA V+ V +LGFF + GPL+VFVSR  +P DI  G+DP  DMWVS ED + EIK GC VRLRI+G+ + A  +
Sbjct:    1 MFFYKKLRHEVLISPEYLGPKLKQTIRRRLIDEIEGSCINKIGYVVCVTDINDTTDIEAGLIEYETGHTSFMVTYGAVLFRPFKNEVLDATVTTVNQLGFFCKAGPLQVFVSRYNLPGDIREGFDPNQDMWVS-EDGEVEIKRGCVVRLRIMGLAMEASKI 160
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BLAST of mRNA_P-littoralis_Contig712.23.2 vs. uniprot
Match: A0A024GUM2_9STRA (ING domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GUM2_9STRA)

HSP 1 Score: 175 bits (444), Expect = 5.730e-47
Identity = 85/155 (54.84%), Postives = 114/155 (73.55%), Query Frame = 1 
Query:  277 MFYLKELTKAMLIPPSDFGPKFKDTVRRKLIEEVEGTSIGSLGFVITVTHVKDEHIQMGTIEFDTGFANVLVAYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTV 741
            MF+LK+L++ +L+ P  FGPK  D +R +LIEEVEGTS+G  G+VITVT V+DE I  G I+  +G+    + YRAI FRPF N+VLDA VS V +LGFFA+VGPL+VFVSR  MP D+  GYD   + W+S +D + EI+  CG+RLRI+GV++
Sbjct:  265 MFFLKQLSRDLLLHPMHFGPKLHDIIRLRLIEEVEGTSMGKYGYVITVTEVRDEDIGKGVIQDSSGYVCFNIRYRAILFRPFKNQVLDAVVSVVNQLGFFADVGPLQVFVSRHAMPTDLNNGYDHENNAWIS-DDREVEIRKSCGIRLRIMGVSI 418
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig712.23.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX58_ECTSI1.130e-9892.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YX29_9STRA1.030e-5964.20S1 motif domain-containing protein n=1 Tax=Tribone... [more]
A0A6S9LV75_HETAK3.360e-5859.87Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2Y2T3_9STRA9.270e-5558.60Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A225WVR4_9STRA2.330e-5255.15Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
K3XAJ8_GLOUD6.410e-5156.13Uncharacterized protein n=27 Tax=Oomycota TaxID=47... [more]
A0A024TU38_9STRA1.500e-4855.48Uncharacterized protein n=8 Tax=Saprolegniaceae Ta... [more]
A0A425DP05_9STRA2.100e-4754.84Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A7S2HLJ0_9STRA4.610e-4751.55Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A024GUM2_9STRA5.730e-4754.84ING domain-containing protein n=1 Tax=Albugo candi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig712contigP-littoralis_Contig712:103788..106982 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FX58
Preferred namePOLR2G
PFAMsS1,SHS2_Rpb7-N
Model size1164
Max annot lvl2759|Eukaryota
KEGG rclassRC00003,RC00060,RC00181,RC00496,RC02795
KEGG koko:K03015,ko:K09186
KEGG ReactionR00435,R00441,R00442,R00443,R03875,R03938,R04866,R04867
KEGG Pathwayko00230,ko00240,ko00310,ko01100,ko03020,ko04934,ko05016,ko05169,ko05202,map00230,map00240,map00310,map01100,map03020,map04934,map05016,map05169,map05202
KEGG ModuleM00180
Hectar predicted targeting categoryother localisation
GOsGO:0000291,GO:0000375,GO:0000377,GO:0000398,GO:0000428,GO:0000932,GO:0000956,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003723,GO:0003727,GO:0003824,GO:0003899,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005665,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006351,GO:0006352,GO:0006354,GO:0006366,GO:0006367,GO:0006368,GO:0006370,GO:0006396,GO:0006397,GO:0006401,GO:0006402,GO:0006417,GO:0006446,GO:0006725,GO:0006807,GO:0006915,GO:0006950,GO:0006974,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0008150,GO:0008152,GO:0008219,GO:0008380,GO:0008543,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009301,GO:0009452,GO:0009719,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010590,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0012501,GO:0016070,GO:0016071,GO:0016073,GO:0016591,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0023052,GO:0030880,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031331,GO:0031369,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032774,GO:0032991,GO:0033554,GO:0034062,GO:0034248,GO:0034250,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0034660,GO:0035770,GO:0036260,GO:0036464,GO:0042221,GO:0042795,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044344,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045727,GO:0045935,GO:0045948,GO:0046483,GO:0046700,GO:0048518,GO:0048519,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051302,GO:0051716,GO:0055029,GO:0060147,GO:0060211,GO:0060213,GO:0060255,GO:0060964,GO:0060966,GO:0060968,GO:0061013,GO:0061014,GO:0061695,GO:0065007,GO:0070013,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071495,GO:0071704,GO:0071774,GO:0080090,GO:0090304,GO:0097159,GO:0097393,GO:0097394,GO:0097659,GO:0097747,GO:0098781,GO:0140098,GO:1900151,GO:1900153,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902494,GO:1903311,GO:1903313,GO:1990234,GO:1990904,GO:2000112
Exons5
Evalue1.55e-102
EggNOG OGsCOG1095@1|root,KOG3298@2759|Eukaryota
EC2.1.1.43
Descriptionpositive regulation of nuclear-transcribed mRNA poly(A) tail shortening
Cds size585
COG categoryK
BRITEbr01611,ko00000,ko00001,ko00002,ko01000,ko03000,ko03019,ko03021,ko03036,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig712.23.2prot_P-littoralis_Contig712.23.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig712 104064..106679 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791487.4630613-UTR-P-littoralis_Contig712:103787..1040631680791487.4630613-UTR-P-littoralis_Contig712:103787..104063Pylaiella littoralis U1_48UTRP-littoralis_Contig712 103788..104063 +
1680791487.5466013-UTR-P-littoralis_Contig712:106679..1069821680791487.5466013-UTR-P-littoralis_Contig712:106679..106982Pylaiella littoralis U1_48UTRP-littoralis_Contig712 106680..106982 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791487.485381-CDS-P-littoralis_Contig712:104063..1040751680791487.485381-CDS-P-littoralis_Contig712:104063..104075Pylaiella littoralis U1_48CDSP-littoralis_Contig712 104064..104075 +
1680791487.495891-CDS-P-littoralis_Contig712:104680..1047481680791487.495891-CDS-P-littoralis_Contig712:104680..104748Pylaiella littoralis U1_48CDSP-littoralis_Contig712 104681..104748 +
1680791487.5094662-CDS-P-littoralis_Contig712:105407..1054771680791487.5094662-CDS-P-littoralis_Contig712:105407..105477Pylaiella littoralis U1_48CDSP-littoralis_Contig712 105408..105477 +
1680791487.5210416-CDS-P-littoralis_Contig712:105930..1061191680791487.5210416-CDS-P-littoralis_Contig712:105930..106119Pylaiella littoralis U1_48CDSP-littoralis_Contig712 105931..106119 +
1680791487.5336833-CDS-P-littoralis_Contig712:106433..1066791680791487.5336833-CDS-P-littoralis_Contig712:106433..106679Pylaiella littoralis U1_48CDSP-littoralis_Contig712 106434..106679 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig712.23.2

>prot_P-littoralis_Contig712.23.2 ID=prot_P-littoralis_Contig712.23.2|Name=mRNA_P-littoralis_Contig712.23.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=195bp
MFYLKELTKAMLIPPSDFGPKFKDTVRRKLIEEVEGTSIGSLGFVITVTH
VKDEHIQMGTIEFDTGFANVLVAYRAICFRPFVNEVLDAAVSHVTELGFF
AEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRI
IGVTVGAELVREKRMPRVHELQDCKPQVLYHCCACDAAYRVRYA*
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mRNA from alignment at P-littoralis_Contig712:103788..106982+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig712.23.2 ID=mRNA_P-littoralis_Contig712.23.2|Name=mRNA_P-littoralis_Contig712.23.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=3195bp|location=Sequence derived from alignment at P-littoralis_Contig712:103788..106982+ (Pylaiella littoralis U1_48)
CGGGACACCACCAAGAGCAGCCGTTGCCCTACGACCGCCACCTCCAGGAC
ACGCGCAGCCTTCTCTGACACGCTCTCCACGTTATTTCCTTTGTTGTTGA
GGTAGGAGATCTGCACGAGGGCGGCCGGGACACCGGAGGGCCGTCGACCA
AGAGCGCTATTAGCAGTCGGCACACAACAACGGCAGACCTTCACAGCAGT
GAAACCTAGGCGTGCGGAGAAGTTTGAGACACGGCCGGCCACGAGAAGGG
GGGGCGAGCTCACCGCCTCCAGCACTATGTTCTACCTGGTGAGTTTTCTC
GATAGCAGTGCCCCTGCCCATTTGCAGGTACTTCTGTACCTCTAGGTGCC
TGTCGGTGTGCATATCGAGGGCACCAGACATTTGTTTTCAAACTGCATCT
ACGACGTACAGCAGTTACGAGCGCTCCATGTTGATCTCTTTCCCATCTCC
ATCTCCATCTCTCTCTCTCTCTCTCTGTGTGTTTGCGTGTTTGTGCCACA
AGCTTTCCTTCTCCGGGGTGGTCCAAGTCTTGTACATTGCGCCTTGATTA
TGCCTTCGTTTGCTTCATCCGCGAGGATGGGCGCCTGACGTAAATGAATC
CTAAATACCAGGTAGGTATGGTAATTGCCTACTTTGATGATACGATCACA
TGTTTTGATATCGCGAGAACATTTACACAGCGACAACCGGGTCTTGTACT
GTACCTACAAAACATGCAACGACATAAGCAATTCTCCAGAACACACCCGC
AACCTCCCATCACAACGATCACAACCTGGTGATGAAAAAAACCCTCGGTT
TGTTGGTGATGGGGCATTGCCGATCTGACTAGCCGTTCTTCCTTGCTGCT
GTTACTCTTTCTGGTGCTGGTGCTGATGCTGCTGGTGCTGCAGAAAGAGC
TGACGAAGGCGATGCTCATTCCGCCGTCAGACTTCGGCCCAAAGTTCAAG
GACACAGTAAGGTGAGAGAGGGAGAGAGAGAGGAAGGGAGGTGACGAGCG
CGAGAGAGAGGGAGATAAAGAGAGCGAGAAAGACAGAAATGGAGCCTCCT
TTCGGCTCATGGCTTCTATTTTTGCTTGTGACCTGTGATGGATCGACGCC
CTTTTCTTTCGTGTTCTCGCCGTTCAGGACAAAATGCTTTAGCGGCATGT
ACGTCCAGGTCTTGGACGTTTCTAGAGTCCTGCAAGGAGTGTAAAGCAGT
TGACCCGCTCTTGGTTTGGCTGTCCTCCCTCACTGCACGACTTGCGGCCG
ACCAGAAGTGCCTCTGATCGCCGCTTAAAAAAACGCGTTAGAGGAATACA
GATTTTCTACTGCAACTGGGAGCTGTGCTTGATTTGAGGGTCTGTTTGGG
CTGTACTGTTTCGTTGAACAGGCGTTGCAACTTCTCATGTTAGCCTACGT
AGCGATCGTTCTTATAGCGGAACAGCGTCAGTAGCATTGCCGCACGCAGC
AAGGACATGCCGGGTATGATATGTATCATTCATCACATGCAAATAGAGGG
AAACTTCACTTATCCGATCATTGCTACTTCATTTTTGACGCCTCCTCCCG
TGTTGTTCCTTGCCCTTCGTCCCATGCTTCCTTTCCCGTCCCCGTCCGCT
GCGGTGTGTGCGTTCACCAGGCGAAAACTTATCGAAGAGGTCGAGGGGAC
TTCGATAGGATCGCTCGGGTTCGTCATCACCGTCACACATGCAAGTGAAA
TAATTTTGCAGAGCGTTACAAATTTGTACTCTGCAAACGTTTGAGGACTC
GCACATTCGGGTTACGTAGCTTCCACTGATAATTTGAACGTAGGTTCGGT
TCCCTCACGAGTCTCCAGGACTAAAACGTTGAACAGCGCCAGAGACCAGC
CCTGTGGAGCCACTGCTGTCGCCTCTAAGAAGGCCGCGGGATGATACACG
GTATACCAGTACCATCATGTCTTGTGTGGCATGTATGACCCATCGAGGCC
ACATCAAAATCGCACGTTTACGCCCCTGAGCGCGCAGGGAAGGCGTTTCG
AACTTCAAGATCCAGTCCACACCGGCCTCGTATGATATCTAGAAAGTACG
GTTTTTTTTGCGTGTTTTTCACTTTCGCCCTTGCAAACACCGCACAAGCT
CGCGCCTTGTGAAGCTTCACGCACACGCACGCACGCACACCAGGTGAAAG
ACGAGCATATCCAGATGGGGACCATAGAGTTCGACACTGGGTTTGCGAAC
GTGCTGGTGGCTTACCGCGCGATTTGCTTCCGGCCGTTCGTGAACGAGGT
TCTGGACGCCGCCGTGAGTCACGTCACGGAGCTCGGGTTCTTCGCAGAAG
TGGGCCCGCTCGAGGTTTTCGTCTCTCGCTTGGTGAGAGTTGATCGACGA
ATGAGCGCGCAAGAGATATTTGACAGCCCTGTGCGATCGCGCGGCCTGGC
CTCGATGTGGATCTTTTTCTTTTTGCCCCTGTTTTGCCGCCGGTCGGCAG
GACAGGCCAACAAAACGACTTGTTCATTCGACCGGTTCGGTGTTTTGTCC
AATTTCGATGTCGATATACTTTTGTGAGTGCTATTGTAGGGGAAGTAGGC
CACTCTTTGCTGCCTCGCTTCTCGTCTGCTTCCCTTAGTTTCTCTCAACG
TGCTACCTCCGCCATTACATTCCTCCACCTCCCTTATTTTGTCAAGGGCA
TGCCGGATGATATCGCGGGAGGCTATGATCCGGTGGGGGACATGTGGGTA
TCGTCTGAGGATTCGGACACCGAGATCAAGTCGGGCTGCGGAGTGCGGTT
GCGCATCATCGGTGTCACCGTGGGGGCAGAGTTGGTGAGAGAGAAACGTA
TGCCTCGGGTACACGAATTGCAAGATTGCAAGCCACAAGTGTTGTACCAC
TGCTGTGCATGTGATGCCGCATACAGGGTGCGCTACGCATGAGGCCTGTT
GCTGGTGATTTGCGTTCACGGTTCGAGTTCGACAACAAACCCTAGGCAAA
AAGTCAGCAAGAACACCACTGCTGTGTGCCCACGTTGAGAGCCGTCGGTT
TCTAGAAAAGACCGACGGTCCGCATGGCAGGTCTCCCGCTTCTTCTACTC
TAGGTTATGGCCCTGATGCTTGCGCTAACTTTGAGTGCTGGACGTTATCG
CTTTGTGGTTTTGTTTGCATAGGTGACCGGCGGATCTTCAGCCTCATGCG
CGATTGATGCACTCATCGTATGGCCGACGAAGAAAGTAAAACGAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig712:103788..106982+

>mRNA_P-littoralis_Contig712.23.2 ID=mRNA_P-littoralis_Contig712.23.2|Name=mRNA_P-littoralis_Contig712.23.2|organism=Pylaiella littoralis U1_48|type=CDS|length=585bp|location=Sequence derived from alignment at P-littoralis_Contig712:103788..106982+ (Pylaiella littoralis U1_48)
ATGTTCTACCTGAAAGAGCTGACGAAGGCGATGCTCATTCCGCCGTCAGA
CTTCGGCCCAAAGTTCAAGGACACAGTAAGGCGAAAACTTATCGAAGAGG
TCGAGGGGACTTCGATAGGATCGCTCGGGTTCGTCATCACCGTCACACAT
GTGAAAGACGAGCATATCCAGATGGGGACCATAGAGTTCGACACTGGGTT
TGCGAACGTGCTGGTGGCTTACCGCGCGATTTGCTTCCGGCCGTTCGTGA
ACGAGGTTCTGGACGCCGCCGTGAGTCACGTCACGGAGCTCGGGTTCTTC
GCAGAAGTGGGCCCGCTCGAGGTTTTCGTCTCTCGCTTGGGCATGCCGGA
TGATATCGCGGGAGGCTATGATCCGGTGGGGGACATGTGGGTATCGTCTG
AGGATTCGGACACCGAGATCAAGTCGGGCTGCGGAGTGCGGTTGCGCATC
ATCGGTGTCACCGTGGGGGCAGAGTTGGTGAGAGAGAAACGTATGCCTCG
GGTACACGAATTGCAAGATTGCAAGCCACAAGTGTTGTACCACTGCTGTG
CATGTGATGCCGCATACAGGGTGCGCTACGCATGA
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