mRNA_P-littoralis_Contig712.17.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig712.17.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE) HSP 1 Score: 301 bits (771), Expect = 1.660e-96 Identity = 153/199 (76.88%), Postives = 177/199 (88.94%), Query Frame = 1
Query: 1 PSLLCDAACLLTPPFSEGNYLSSMKLAAEENDYLAAGSSVVAPTTNEEVQEKLDGVWAEIKKRAITAVKTAQSRAAGDGGGHGTNLFKRARTGGAGSSRRKNNDDLFSVFGRNEVAPSQNEG-DVDLVEEEVSSEIMRYKGVFMKSTDLPPTEVLNYWSKVGKQMFPSLKYVAQQTFGVQASAAQVERDFSHCGLFSVG 594
PS+ CDAACLLTPPFSEGNYLS+MKL AEE+D LAA S+VVAPT++E+V+EKL+G+WAEIKKRA+TAVKT Q+R AG+GGG G++ FKRART GA SRRKN +D FS+FG NEVAPSQ++G DVD VEEEVS EI+RYKGVFMK DLPP++VL YW+KVGKQMFPSLKYVAQQTFG QASAAQ+ERDFSHCGLFS G
Sbjct: 339 PSMFCDAACLLTPPFSEGNYLSAMKLTAEEDDNLAAVSTVVAPTSDEDVREKLEGIWAEIKKRAVTAVKTEQNRVAGEGGGQGSDPFKRARTSGAVPSRRKNYEDDFSMFGCNEVAPSQSDGGDVDFVEEEVSGEIIRYKGVFMKPIDLPPSDVLAYWNKVGKQMFPSLKYVAQQTFGSQASAAQIERDFSHCGLFSTG 537
BLAST of mRNA_P-littoralis_Contig712.17.1 vs. uniprot
Match: A0A6H5K0P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0P1_9PHAE) HSP 1 Score: 276 bits (707), Expect = 1.600e-86 Identity = 145/199 (72.86%), Postives = 168/199 (84.42%), Query Frame = 1
Query: 1 PSLLCDAACLLTPPFSEGNYLSSMKLAAEENDYLAAGSSVVAPTTNEEVQEKLDGVWAEIKKRAITAVKTAQSRAAGDGGGHGTNLFKRARTGGAGSSRRKNNDDLFSVFGRNEVAPSQN-EGDVDLVEEEVSSEIMRYKGVFMKSTDLPPTEVLNYWSKVGKQMFPSLKYVAQQTFGVQASAAQVERDFSHCGLFSVG 594
PS+ CDAACLLTPPFSEGNY S+MKL AEE++YLAAGS+VVAPT++E+V+EKL+G+WAEIKKRAITAVKTAQ+RAAG+GGG G++ FKRART GA SRRKN ++ FS+FGRNEVAPSQ+ EGDVD VEEEVS EIMR +VL YW+KVG+QM PSLKYVAQQTFG QASAAQ+ERDFSHCGLFS G
Sbjct: 459 PSMFCDAACLLTPPFSEGNYPSAMKLTAEEDEYLAAGSTVVAPTSDEDVREKLEGIWAEIKKRAITAVKTAQNRAAGEGGGQGSDPFKRARTSGAAPSRRKNYENDFSMFGRNEVAPSQSDEGDVDFVEEEVSGEIMR--------------DVLTYWNKVGEQMLPSLKYVAQQTFGSQASAAQIERDFSHCGLFSTG 643
BLAST of mRNA_P-littoralis_Contig712.17.1 vs. uniprot
Match: A0A6H5JWR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWR2_9PHAE) HSP 1 Score: 245 bits (626), Expect = 5.790e-76 Identity = 129/174 (74.14%), Postives = 143/174 (82.18%), Query Frame = 1
Query: 76 LAAEENDYLAAGSSVVAPTTNEEVQEKLDGVWAEIKKRAITAVKTAQSRAAGDGGGHGTNLFKRARTGGAGSSRRKNNDDLFSVFGRNEVAP-SQNEGDVDLVEEEVSSEIMRYKGVFMKSTDLPPTEVLNYWSKVGKQMFPSLKYVAQQTFGVQASAAQVERDFSHCGLFSVG 594
L AEE +YL AGS V+ PT++E+VQEKLD WAEIKKRA+TAVK AQSRA GDGG FKRART GAG SRRKN+DD F+VFGRNEVAP S NE D+DLVE+ VSSEIMRYKGVFM+STDLPP++VL+YW VGK FPSLKYVAQQT G QASA QVER FSHCGLF VG
Sbjct: 295 LTAEEGEYLPAGSDVIVPTSDEDVQEKLDETWAEIKKRAVTAVKKAQSRAVGDGGNGEAGPFKRARTSGAGPSRRKNHDDAFAVFGRNEVAPQSSNEEDLDLVEKGVSSEIMRYKGVFMRSTDLPPSKVLHYWKTVGKHSFPSLKYVAQQTLGSQASAPQVERGFSHCGLFCVG 468
BLAST of mRNA_P-littoralis_Contig712.17.1 vs. uniprot
Match: A0A6H5JWE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWE7_9PHAE) HSP 1 Score: 214 bits (544), Expect = 3.010e-65 Identity = 110/157 (70.06%), Postives = 126/157 (80.25%), Query Frame = 1
Query: 1 PSLLCDAACLLTPPFSEGNYLSSMKLAAEENDYLAAGSSVVAPTTNEEVQEKLDGVWAEIKKRAITAVKTAQSRAAGDGGGHGTNLFKRARTGGAGSSRRKNNDDLFSVFGRNEVAPSQNEGDVDLVEEEVSSEIMRYKGVFMKSTDLPPTEVLNYW 471
PS+LCDA CLLTPPFSEGNY+S+MKL AEE +YL AGS V APT +EEV+EKLDG W EIKKRA+ AVKTAQSRAA KRART AG +RRKN +D F+VFGR EVAP +EG++DLVEEEVSSEIMRYKGVF++STDL P+E LNYW
Sbjct: 209 PSVLCDAPCLLTPPFSEGNYVSAMKLTAEECEYLPAGSCVTAPTLDEEVKEKLDGAWTEIKKRAVAAVKTAQSRAAXXXXXXXXXPLKRARTSAAGPTRRKNREDAFAVFGRKEVAPQSSEGNLDLVEEEVSSEIMRYKGVFIESTDLSPSEALNYW 365
BLAST of mRNA_P-littoralis_Contig712.17.1 vs. uniprot
Match: A0A6H5KBZ2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ2_9PHAE) HSP 1 Score: 202 bits (515), Expect = 4.180e-63 Identity = 109/155 (70.32%), Postives = 122/155 (78.71%), Query Frame = 1
Query: 1 PSLLCDAACLLTPPFSEGNYLSSMKLAAEENDYLAAGSSVVAPTTNEEVQEKLDGVWAEIKKRAITAVKTAQSRAAGDGGGHGTNLFKRARTGGAGSSRRKNN--DDLFSVFGRNEVAPSQNE--GDVDLVEEEVSSEIMRYKGVFMKSTDLPPT 453
PS+ D ACLLTPPFSEGNYLS+MKL EE DYL AGSSV+APT++E+V+EKLDG WAEI+KRA+TAVK AQ +AAGD G G FKRART GAG SRRKN DD F+ FGRNEVAP NE DVDLVEEEV SEIMRYKGVFM+ D+ T
Sbjct: 38 PSIFADVACLLTPPFSEGNYLSAMKLTVEEGDYLPAGSSVIAPTSDEDVREKLDGAWAEIQKRAVTAVKKAQRQAAGDSDGGGAGPFKRARTNGAGPSRRKNENQDDTFAAFGRNEVAPQTNEEDADVDLVEEEVVSEIMRYKGVFMRPKDVSTT 192
BLAST of mRNA_P-littoralis_Contig712.17.1 vs. uniprot
Match: A0A6H5JZ66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ66_9PHAE) HSP 1 Score: 203 bits (516), Expect = 6.170e-60 Identity = 104/138 (75.36%), Postives = 123/138 (89.13%), Query Frame = 1
Query: 1 PSLLCDAACLLTPPFSEGNYLSSMKLAAEENDYLAAGSSVVAPTTNEEVQEKLDGVWAEIKKRAITAVKTAQSRAAGDGGGHGTNLFKRARTGGAGSSRRKNNDDLFSVFGRNEVAPSQN-EGDVDLVEEEVSSEIMR 411
PS+ CDAACLLTPPFSEGNYLS+MKL AEE++YLAAGS+VVAPT++E+V+EKL+G+W EI KRA+TAVKTA +RAAG+GGG G + FKRART GA SRRKN++D FS+FGRNEVAPSQ+ EGDVD VEEEVS EIMR
Sbjct: 330 PSMFCDAACLLTPPFSEGNYLSAMKLTAEEDEYLAAGSTVVAPTSDEDVREKLEGIWVEINKRAVTAVKTAHNRAAGEGGGQGLDPFKRARTSGAAPSRRKNHEDDFSMFGRNEVAPSQSDEGDVDFVEEEVSGEIMR 467
BLAST of mRNA_P-littoralis_Contig712.17.1 vs. uniprot
Match: A0A6H5JGB7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGB7_9PHAE) HSP 1 Score: 197 bits (502), Expect = 9.980e-59 Identity = 105/143 (73.43%), Postives = 114/143 (79.72%), Query Frame = 1
Query: 1 PSLLCDAACLLTPPFSEGNYLSSMKLAAEENDYLAAGSSVVAPTTNEEVQEKLDGVWAEIKKRAITAVKTAQSRAAGDGGGHGTNLFKRARTGGAGSSRRKNNDDLFSVFGRNEVAPSQNEGDVDLVEEEVSSEIMRYKGVFM 429
PS+LCDAACLLTPPFSEGNYLS+MKL AE +YL GS V APT +EEVQ+KLDG WAEIKKRA+ AVKTAQSRAAG KRART AGSSRRKN +D F+ FGRNEV P EGDVDLVE+EVSSEIMRYKGVFM
Sbjct: 244 PSVLCDAACLLTPPFSEGNYLSAMKLTAEGCEYLPTGSCVTAPTPDEEVQKKLDGAWAEIKKRAVAAVKTAQSRAAGXXXXXXKRPLKRARTSAAGSSRRKNREDAFASFGRNEVDPQSREGDVDLVEKEVSSEIMRYKGVFM 386
BLAST of mRNA_P-littoralis_Contig712.17.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE) HSP 1 Score: 201 bits (512), Expect = 7.350e-57 Identity = 111/197 (56.35%), Postives = 138/197 (70.05%), Query Frame = 1
Query: 1 PSLLCDAACLLTPPFSEGNYLSSMKLAAEENDYLAAGSSVVAPTTNEEVQEKLDGVWAEIKKRAITAVKTAQSRAAGDGGGHGTNLFKRARTGGAGSSRRKNNDDLFSVFGRNEVAPSQNEGDVDLVEEEVSSEIMRYKGVFMKSTDLPPTEVLNYWSKVGKQMFPSLKYVAQQTFGVQASAAQVERDFSHCGLFSV 591
P C AACLLTPPFSEG ++++MKLAA +++YL + S+ APT +EEV KLD W EIK+RA+ AVK Q+ A+ G G +FKRART G RR + D F+ FGR+ V + D VE+EV++EIMRYKGVFM S DL PTEVL+YW+ G+ FP+LK+VAQQTFG Q SAA VERDFS CGLF V
Sbjct: 583 PPFFCHAACLLTPPFSEGLHVAAMKLAAGDDEYLPSTSTATAPTMDEEVTAKLDETWKEIKERAVEAVKKEQAAASSGPGAAG--VFKRARTAGXXXRRRPVDGDEFAAFGRS-VGGVEESKQGDAVEQEVANEIMRYKGVFMTSNDLHPTEVLSYWATTGRHSFPALKHVAQQTFGSQPSAAPVERDFSGCGLFLV 776
BLAST of mRNA_P-littoralis_Contig712.17.1 vs. uniprot
Match: A0A6H5KEE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE6_9PHAE) HSP 1 Score: 176 bits (446), Expect = 1.780e-49 Identity = 94/151 (62.25%), Postives = 115/151 (76.16%), Query Frame = 1
Query: 1 PSLLCDAACLLTPPFSEGNYLSSMKLAAEENDYLAAGSSVVAPTTNEEVQEKLDGVWAEIKKRAITAVKTAQSRAAGDGGGHGTNLFKRARTGGAGSSRRKNNDD-LFSVFGRNEVAPSQNEGDVDLVEEEVSSEIMRYKGVFMKSTDLPP 450
PS CDA+CLLTPPFSEG++LS+MKL AEE+ YL AGS VVAPT+ EEV+EKLDGVW +IK+ A+ AVKTAQS A G GG LFKRART +GSSRRKN ++ F+ FGR E ++G+ D+VE++V EIMRYKGVF+KST P
Sbjct: 299 PSFFCDASCLLTPPFSEGHHLSAMKLTAEEHAYLPAGSVVVAPTSYEEVKEKLDGVWTKIKQGAVKAVKTAQSEAEGSGGDGSGGLFKRARTRHSGSSRRKNPEEHQFACFGRTETTQEDSQGESDVVEDDVGGEIMRYKGVFIKSTQRSP 449
BLAST of mRNA_P-littoralis_Contig712.17.1 vs. uniprot
Match: A0A6H5K8W6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W6_9PHAE) HSP 1 Score: 169 bits (429), Expect = 8.980e-47 Identity = 98/197 (49.75%), Postives = 118/197 (59.90%), Query Frame = 1
Query: 1 PSLLCDAACLLTPPFSEGNYLSSMKLAAEENDYLAAGSSVVAPTTNEEVQEKLDGVWAEIKKRAITAVKTAQSRAAGDGGGHGTNLFKRARTGGAGSSRRKNNDDLFSVFGRNEVAPSQNEGDVDLVEEEVSSEIMRYKGVFMKSTDLPPTEVLNYWSKVGKQMFPSLKYVAQQTFGVQASAAQVERDFSHCGLFSV 591
PS CDAACLLTPPFSEG ++S+M+L AE+ YL S+++APT + EV KLD W EI+KRA+ +VKT Q RA G G G FKRA T G S+R + D F+ GR VEE + T +EVL+YW + GK FPSLK+VAQQTFG QASAA VERDFS CGLF V
Sbjct: 261 PSFFCDAACLLTPPFSEGRHVSAMRLTAEDAMYLPNSSNIIAPTADFEVTAKLDWAWTEIRKRAVESVKTEQDRAGGSDAGGGGGPFKRAHTSGGRSARNPTDPDEFTDSGRTAA-----------VEEA------------RRMTSCSRSEVLSYWGRTGKHAFPSLKHVAQQTFGNQASAAPVERDFSGCGLFMV 434 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig712.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig712.17.1 >prot_P-littoralis_Contig712.17.1 ID=prot_P-littoralis_Contig712.17.1|Name=mRNA_P-littoralis_Contig712.17.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=198bp PSLLCDAACLLTPPFSEGNYLSSMKLAAEENDYLAAGSSVVAPTTNEEVQback to top mRNA from alignment at P-littoralis_Contig712:90083..90875+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig712.17.1 ID=mRNA_P-littoralis_Contig712.17.1|Name=mRNA_P-littoralis_Contig712.17.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=793bp|location=Sequence derived from alignment at P-littoralis_Contig712:90083..90875+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig712:90083..90875+ >mRNA_P-littoralis_Contig712.17.1 ID=mRNA_P-littoralis_Contig712.17.1|Name=mRNA_P-littoralis_Contig712.17.1|organism=Pylaiella littoralis U1_48|type=CDS|length=594bp|location=Sequence derived from alignment at P-littoralis_Contig712:90083..90875+ (Pylaiella littoralis U1_48)back to top |