prot_P-littoralis_Contig118.82.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig118.82.1
Unique Nameprot_P-littoralis_Contig118.82.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length439
Homology
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BLAST of mRNA_P-littoralis_Contig118.82.1 vs. uniprot
Match: A0A6H5KZS0_9PHAE (CCT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZS0_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 7.300e-17
Identity = 46/60 (76.67%), Postives = 51/60 (85.00%), Query Frame = 0 
Query:  319 ARYLXXXXXXRWSKASSYQSRQRVANSRPRHKGRFLPLESEFLPIAELQKRQRAMMKQMQ 378
            ARYL      RWSKAS YQSRQRVANSRPRHKGRFLPLESEF+PIAE+Q+RQR +M QM+
Sbjct:  310 ARYLAKKQRRRWSKASCYQSRQRVANSRPRHKGRFLPLESEFVPIAEVQRRQRVLMAQMR 369
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BLAST of mRNA_P-littoralis_Contig118.82.1 vs. uniprot
Match: D8LIC1_ECTSI (CCT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIC1_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 1.020e-15
Identity = 48/62 (77.42%), Postives = 52/62 (83.87%), Query Frame = 0 
Query:  319 ARYLXXXXXXRWSK--ASSYQSRQRVANSRPRHKGRFLPLESEFLPIAELQKRQRAMMKQMQ 378
            ARYL       WSK  ASSYQSRQRVANSRPRHKGRFLPLESEF+PIAELQ+RQRA+M QM+
Sbjct:  262 ARYLAKKQRRCWSKPAASSYQSRQRVANSRPRHKGRFLPLESEFVPIAELQRRQRALMVQMR 323
[Close]
BLAST of mRNA_P-littoralis_Contig118.82.1 vs. uniprot
Match: A0A6H5KKD0_9PHAE (CCT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKD0_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 1.060e-15
Identity = 48/62 (77.42%), Postives = 52/62 (83.87%), Query Frame = 0 
Query:  319 ARYLXXXXXXRWSK--ASSYQSRQRVANSRPRHKGRFLPLESEFLPIAELQKRQRAMMKQMQ 378
            ARYL       WSK  ASSYQSRQRVANSRPRHKGRFLPLESEF+PIAELQ+RQRA+M QM+
Sbjct:  263 ARYLAKKQRRCWSKPAASSYQSRQRVANSRPRHKGRFLPLESEFVPIAELQRRQRALMVQMR 324
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig118.82.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KZS0_9PHAE7.300e-1776.67CCT domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LIC1_ECTSI1.020e-1577.42CCT domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KKD0_9PHAE1.060e-1577.42CCT domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010402CCT domainPFAMPF06203CCTcoord: 314..354
e-value: 4.8E-14
score: 52.2
IPR010402CCT domainPROSITEPS51017CCTcoord: 314..356
score: 11.478798
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 329..350
NoneNo IPR availablePANTHERPTHR31319:SF77ZINC FINGER PROTEIN CONSTANS-LIKE 4coord: 58..355
IPR045281Zinc finger protein CONSTANS-likePANTHERPTHR31319ZINC FINGER PROTEIN CONSTANS-LIKE 4coord: 58..355

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig118contigP-littoralis_Contig118:321410..322726 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig118.82.1mRNA_P-littoralis_Contig118.82.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig118 321291..324290 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig118.82.1 ID=prot_P-littoralis_Contig118.82.1|Name=mRNA_P-littoralis_Contig118.82.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=439bp
MHDDETTDMCSPFWAFPGATRCRLGISHPTVNGGAAAVPADTSTMNADAD
SEIGIGINTSEANNTAVQDHHHQHWDEDANDVFALGTGTGGGDGVAVAGE
EEFIATDTDGVLDDFLALVSSGDGDGSAGMDTAVMMGLGGDGVNIAEEDL
VWLGEGMDLTAALLPPPRAATDTDFATGVDALNSALASSVHEIEPLPLPI
VVEGAAAAAAVAATTPVAAAVPAPAAPPVVLSQAAGDTGPTPSRVAGGGG
GLIAAVVGTTGRGEDVAMSRNGDDAAAAAAVITTTNESGSTHDSVAGGVS
ASGGGEVDRKQELRRQKVARYLAKKKRRRWSKASSYQSRQRVANSRPRHK
GRFLPLESEFLPIAELQKRQRAMMKQMQEKAATMAATAAESHQVPPPIQQ
EVAGGAASLLSPGGMAAAAGVSLSGRPLSPDCVHQVAI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010402CCT_domain
IPR045281CONSTANS-like