mRNA_P-littoralis_Contig711.23.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig711.23.1 vs. uniprot
Match: D8LJA4_ECTSI (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJA4_ECTSI) HSP 1 Score: 582 bits (1500), Expect = 2.510e-196 Identity = 346/492 (70.33%), Postives = 375/492 (76.22%), Query Frame = 3
Query: 390 RAIFLDNHGGWVSCDTAGDACSSTGNNSSSKLHLENLSLQQLRKQAQQQGQTSAGPKKELVGRLLRQEPPAPTRPRRRRHGKPTGTPPAGYVERQVTKRPRPLHPYTPQLRVLSWNVNGIRAQMEKEEGRQALKAIIAQERPHVLGLQETRVSAAXXXXXXXXXXXXXTAQKITQKKKASSSSDFMDIVNTILPDYDTFWLSSVPPARQGYSGTALFVRKRRTWDIGCPKLLNVRGGIGHREGDLEGRVTTAEFDVAFVVNVYTPNAGAGLKRLDFRTLEWDRAFAAYVRGLEKMKPVVVMGDMNVAHEDKDFYNPEQKRMRKAAGTTPEERRSFAVNLLGRDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------SGSDGFLVDTFRERHPDASGVFSYWSVRAGNRPVNRGMRLDYCLASPALARGGSGGXXXXXXXXXXXXXXXRGVVHDAFVLDRDTVGVSDHCPVGVVLRLGDHYPE 1826
+AIFL++ G WVSCD N +KL LE L++ +LR +A+++GQT+ G KK+L+ RL QE P P RPRRR HGKP TP GYVERQ T RPRPLHPYTPQLRVLSWNVNGIRAQM+KEEGR+AL+ IIAQERPHVLGLQE R SA K +KK +S+F DIV TILPDYDT WLSSVPPARQGY+GTALFVRK+R+WDIGCPKLL VRGGIGH EGDLEGRVTTAE DVAFVVNVYTPNAGAGLKRLDFRT +WD+AFAAYVR LEK+KPVVV+GDMNVAHED DFYNPEQKR RKAAGTTPEER SFAVNLLG PXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GS LVDTFRE+HP +GVFSYWSVRA NRPVNRGMRLDYCLAS L GG G VHDAFVLDRDTVGVSDHCPVGVVLRLGDHYPE
Sbjct: 21 KAIFLEHDGKWVSCDKTLGMTEQQQN--LTKLQLEGLTVPELRHEARRRGQTATGSKKDLIQRLFSQEAPVPKRPRRRNHGKPVDTP-EGYVERQTTTRPRPLHPYTPQLRVLSWNVNGIRAQMDKEEGRKALQGIIAQERPHVLGLQEIRTSATTSTPPG----------KTRRKKTPPQTSNFADIVKTILPDYDTIWLSSVPPARQGYAGTALFVRKKRSWDIGCPKLLGVRGGIGHPEGDLEGRVTTAELDVAFVVNVYTPNAGAGLKRLDFRTKDWDQAFAAYVRDLEKIKPVVVVGDMNVAHEDVDFYNPEQKRTRKAAGTTPEERSSFAVNLLGCHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKAEGSGCSLVDTFREKHPKVTGVFSYWSVRARNRPVNRGMRLDYCLASRGLV-GGDG-------------------VHDAFVLDRDTVGVSDHCPVGVVLRLGDHYPE 479
BLAST of mRNA_P-littoralis_Contig711.23.1 vs. uniprot
Match: A0A6J1DIY8_MOMCH (DNA-(apurinic or apyrimidinic site) endonuclease n=8 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1DIY8_MOMCH) HSP 1 Score: 204 bits (518), Expect = 8.570e-53 Identity = 137/385 (35.58%), Postives = 201/385 (52.21%), Query Frame = 3
Query: 678 TKRPRPLHPYTPQLRVLSWNVNGIRAQMEKEEGRQALKAIIAQERPHVLGLQETRVSAAXXXXXXXXXXXXXTAQKITQKKKAS-------SSSDFMDIVNTILPDYD-TFWLSSVPPARQGYSGTALFVRKRRTWDIGCPKLLNVRGGIGHREGDLEGRVTTAEFDVAFVVNVYTPNAGAGLKRLDFRTLEWDRAFAAYVRGLEKMKPVVVMGDMNVAHEDKDFYNPEQKRMRKAAGTTPEERRSFAVNLLGRDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSDGFLVDTFRERHPDASGVFSYWSVRAGNRPVNRGMRLDYCLASPALARGGSGGXXXXXXXXXXXXXXXRGVVHDAFVLDRDTVGVSDHCPVGVVLRL 1808
T RP PL T L++LSWNVNG+RA + K G AL + +E +L LQET++ A ++++ ++++S + D ++I +++ Y T+W SV ++ GYSGTA+ R + L+VR G+G E D EGR+ AEFD F+++VY PN+G GLKRL +R +WD + + Y++ LEK+KPV++ GD+N AH++ D YNP R ++AG T EER+SF N L + GF VDTFR++HP+ G ++YW R G R NRG RLDY L S ++A VHD+++L VG SDHCP+G+VL+L
Sbjct: 231 TMRPSPLSKDTKSLKILSWNVNGLRALL-KLGGFSAL-GLAEREAFDILCLQETKLQPASR------------SERVGGRQRSSLGDGGFYTEKDILEIKKSLMDGYHHTYWTCSV--SKLGYSGTAIISRIQP---------LSVRYGVGISEHDGEGRLVVAEFDSFFLLSVYVPNSGDGLKRLSYRITQWDLSLSKYIKELEKLKPVILSGDLNCAHQEIDIYNPAGNR--RSAGFTDEERKSFETNFLEK-----------------------------------GF-VDTFRQQHPNVVG-YTYWGYRHGGRKTNRGWRLDYFLVSDSIAE----------------------KVHDSYILP--DVGGSDHCPIGLVLKL 527
BLAST of mRNA_P-littoralis_Contig711.23.1 vs. uniprot
Match: UPI0019011401 (DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic isoform X1 n=3 Tax=Benincasa hispida TaxID=102211 RepID=UPI0019011401) HSP 1 Score: 199 bits (507), Expect = 1.240e-51 Identity = 137/376 (36.44%), Postives = 193/376 (51.33%), Query Frame = 3
Query: 684 RPRPLHPYTPQLRVLSWNVNGIRAQMEKEEGRQALKAIIAQERPHVLGLQETRVSAAXXXXXXXXXXXXXTAQKITQKKKASSSSDFMDIVNTILPDYD-TFWLSSVPPARQGYSGTALFVRKRRTWDIGCPKLLNVRGGIGHREGDLEGRVTTAEFDVAFVVNVYTPNAGAGLKRLDFRTLEWDRAFAAYVRGLEKMKPVVVMGDMNVAHEDKDFYNPEQKRMRKAAGTTPEERRSFAVNLLGRDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSDGFLVDTFRERHPDASGVFSYWSVRAGNRPVNRGMRLDYCLASPALARGGSGGXXXXXXXXXXXXXXXRGVVHDAFVLDRDTVGVSDHCPVGVVLRL 1808
RP PL T +++LSWNVNG+RA ++ G A++ + +E +L LQET++ Q+K D +DI +++ Y T+W SV ++ GYSGTA+ R + ++VR G+G E D EGRV T EFD F++NVY PN+G GLKRL +R +WD + + Y++ LEK+KPV++ GD+N AH++ D YNP R K+AG T EER+SFA N L + GF VDTFR++HPD G ++YW R G R N+G RLDY L S +A VHD+++L VG SDHCP+G+VL+L
Sbjct: 224 RPTPLSKDTKSVKILSWNVNGLRALLK---GFSAVE-LAEREDFDILCLQETKL----------------------QEK------DILDIKKSLVDGYHYTYWTCSV--SKLGYSGTAIISRIQP---------ISVRYGVGISEHDGEGRVVTVEFDSFFLLNVYVPNSGDGLKRLSYRIAQWDPSLSNYMKELEKLKPVILTGDLNCAHQEIDIYNPAGNR--KSAGFTNEERQSFATNFLEK-----------------------------------GF-VDTFRQKHPDIIG-YTYWGYRHGGRKTNKGWRLDYFLVSETMAE----------------------KVHDSYILP--DVGGSDHCPIGLVLKL 493
BLAST of mRNA_P-littoralis_Contig711.23.1 vs. uniprot
Match: A4RUE7_OSTLU (DNA-(apurinic or apyrimidinic site) endonuclease (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RUE7_OSTLU) HSP 1 Score: 191 bits (484), Expect = 4.920e-51 Identity = 135/360 (37.50%), Postives = 175/360 (48.61%), Query Frame = 3
Query: 729 SWNVNGIRAQMEKEEGRQALKAIIAQERPHVLGLQETRVSAAXXXXXXXXXXXXXTAQKITQKKKASSSSDFMDIVNTILPDYDTFWLSSVPPARQGYSGTALFVRKRRTWDIGCPKLLNVRGGIGHREGDLEGRVTTAEFDVAFVVNVYTPNAGAGLKRLDFRTLEWDRAFAAYVRGLEKMKPVVVMGDMNVAHEDKDFYNPEQKRMRKAAGTTPEERRSFAVNLLGRDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSDGFLVDTFRERHPDASGVFSYWSVRAGNRPVNRGMRLDYCLASPALARGGSGGXXXXXXXXXXXXXXXRGVVHDAFVLDRDTVGVSDHCPVGVVLRL 1808
+WNV G+R+ EK R L+ +IA E P V+ LQE K + + + F + + P Y T + V A++GYSG A T+D PKLL +R G+G R EGR T EF+ ++V Y PN+G LKRLD+R EW+R A+++ L+ KPVV MGD+NVAH D D +N ++K+AGTTP+ER +F V L D L D FR H DA G FSYWSVRAGNRP N+G+RLDY LAS + GG+ G V DAF+LD+ V SDH PVGV L L
Sbjct: 1 AWNVAGLRSFHEKSLDR--LRGVIAGEAPDVVILQE-------------------------HKLQETHCAAFTERLRRDFPMYKTVQFA-VSVAKKGYSGVA-------TYD--GPKLLEIREGLGARGYTDEGRTMTLEFEGFYLVTAYVPNSGQDLKRLDYRIGEWERDMRAHLKELDAKKPVVYMGDLNVAHLDSDIWNVGASHIKKSAGTTPQEREAFGVMLEEND------------------------------------LRDAFRHFHGDAVGWFSYWSVRAGNRPFNKGLRLDYTLASKRVFDGGADGVE----------------VVDAFILDK--VLGSDHAPVGVTLAL 269
BLAST of mRNA_P-littoralis_Contig711.23.1 vs. uniprot
Match: A0A4D9C4H4_SALSN (DNA-(apurinic or apyrimidinic site) endonuclease n=8 Tax=Salvia TaxID=21880 RepID=A0A4D9C4H4_SALSN) HSP 1 Score: 199 bits (505), Expect = 6.930e-51 Identity = 135/380 (35.53%), Postives = 193/380 (50.79%), Query Frame = 3
Query: 678 TKRPRPLHPYTPQLRVLSWNVNGIRAQMEKEEGRQALKAIIAQERPH--VLGLQETRVSAAXXXXXXXXXXXXXTAQKITQKKKASSSSDFMDIVNTILPDYD-TFWLSSVPPARQGYSGTALFVRKRRTWDIGCPKLLNVRGGIGHREGDLEGRVTTAEFDVAFVVNVYTPNAGAGLKRLDFRTLEWDRAFAAYVRGLEKMKPVVVMGDMNVAHEDKDFYNPEQKRMRKAAGTTPEERRSFAVNLLGRDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSDGFLVDTFRERHPDASGVFSYWSVRAGNRPVNRGMRLDYCLASPALARGGSGGXXXXXXXXXXXXXXXRGVVHDAFVLDRDTVGVSDHCPVGVVLRL 1808
T RP P+ TP +++LSWNVNG+RA ++ E + A+ +R VL LQET++ A+ + +KA+ D I T+L YD ++W SV ++ GYSGTA+ R K L+VR G+G + D EGR+ T EFD ++++ Y PN+G GLKRL +R EWD + Y++ LE+ KPV++ GD+N AHE+ D +NP + ++AG T EER+SF N L R GF VDTFR++HP+ +SYW R G R N+G RLDY L S +++ VHDA++L VG SDHCPVG++L+L
Sbjct: 259 TMRPPPIAADTPHVKLLSWNVNGLRALLKLE----SFSALELSKRVDFDVLCLQETKLQASPSFVYF-------------ELEKATLEKDVNAIKETLLQGYDNSYWTCSV--SKLGYSGTAIISRI---------KPLSVRYGLGISDHDSEGRLVTLEFDNFYLLSCYVPNSGDGLKRLPYRIAEWDTSLGNYMKDLEQSKPVILTGDLNCAHEEMDIFNPAGNK--RSAGFTEEERKSFETNFLDR-----------------------------------GF-VDTFRKQHPNVV-AYSYWGYRHGGRRTNKGWRLDYFLVSESISE----------------------KVHDAYILP--DVGGSDHCPVGLILKL 547
BLAST of mRNA_P-littoralis_Contig711.23.1 vs. uniprot
Match: W7TRL7_9STRA (DNA-(apurinic or apyrimidinic site) endonuclease n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRL7_9STRA) HSP 1 Score: 199 bits (506), Expect = 7.200e-51 Identity = 135/372 (36.29%), Postives = 186/372 (50.00%), Query Frame = 3
Query: 714 QLRVLSWNVNGIRAQMEK-EEGRQALKAIIAQERPHVLGLQETRVSAAXXXXXXXXXXXXXTAQKITQKKKASSSSDFMDIVNTILPDYDTFWLSSVPPARQGYSGTALFVRKRRTWDIGCPKLLNVRGGIGHREGDLEGRVTTAEFDVAFVVNVYTPNAGAGLKRLDFRTLEWDRAFAAYVRGLEKM----KPVVVMGDMNVAHEDKDFYNPEQKRMRKAAGTTPEERRSFAVNLLGRDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSDGFLVDTFRERHPDASGVFSYWSVRAGNRPVNRGMRLDYCLASPALARGGSGGXXXXXXXXXXXXXXXRGVVHDAFVLDRDTV--GVSDHCPVGVVLRL 1808
+LR+LSWNV G+R ++K E +A ++++ +ERP VL LQET K+ ++ A ++ ++ LP ++ W S A++GYSGT++ V + +G + G G RV + + +VNVYTPN+G GL+RL FRT WDRAF ++ L+ + V+ GD+NVAH D DFYNP + RM KAAGTTPEER SF L G +VD+FR HPD +G +SYWS+RAGNRP NRGMRLDY LAS + RGG G D+F+LD+D +SDH PVGV+L +
Sbjct: 271 RLRLLSWNVAGLRGLLKKGETAAEAFRSLLLRERPDVLCLQET---------------------KLQEEHVAEVAAALRELH---LPTFEGNWHCST--AKKGYSGTSVLVSESAGLAVGPGGVTC--GMEGEXXXXXXXRVISVDLGAFTLVNVYTPNSGEGLRRLAFRTQAWDRAFERHLEALQGAGDGNRAVLCCGDLNVAHLDADFYNPGEARMAKAAGTTPEERASFGRLLEGAG------------------------------------MVDSFRHYHPDVTGCYSYWSMRAGNRPYNRGMRLDYFLASKNMLRGGDEGGGVPRLL-------------DSFILDQDPAVSKLSDHAPVGVLLEV 565
BLAST of mRNA_P-littoralis_Contig711.23.1 vs. uniprot
Match: A0A1S3B8L3_CUCME (DNA-(apurinic or apyrimidinic site) endonuclease n=4 Tax=Cucumis TaxID=3655 RepID=A0A1S3B8L3_CUCME) HSP 1 Score: 197 bits (502), Expect = 9.150e-51 Identity = 136/376 (36.17%), Postives = 191/376 (50.80%), Query Frame = 3
Query: 684 RPRPLHPYTPQLRVLSWNVNGIRAQMEKEEGRQALKAIIAQERPHVLGLQETRVSAAXXXXXXXXXXXXXTAQKITQKKKASSSSDFMDIVNTILPDYD-TFWLSSVPPARQGYSGTALFVRKRRTWDIGCPKLLNVRGGIGHREGDLEGRVTTAEFDVAFVVNVYTPNAGAGLKRLDFRTLEWDRAFAAYVRGLEKMKPVVVMGDMNVAHEDKDFYNPEQKRMRKAAGTTPEERRSFAVNLLGRDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSDGFLVDTFRERHPDASGVFSYWSVRAGNRPVNRGMRLDYCLASPALARGGSGGXXXXXXXXXXXXXXXRGVVHDAFVLDRDTVGVSDHCPVGVVLRL 1808
RP+PL T +++LSWNVNG+RA ++ G A++ + +E +L LQET++ Q+K D + I +++ Y T+W SV ++ GYSGTA+ R K ++VR G+G E D EGRV EFD F++NVY PN+G GLKRL +R EWD + + Y++ LEK+KPV++ GD+N AH++ D YNP R K+AG T EER+SF N L + GF VDTFR++HPD G ++YW R G R N+G RLDY L S +A VHD+++L VG SDHCP+G+VL+L
Sbjct: 246 RPKPLSKDTKSVKILSWNVNGLRALLK---GSSAVE-LAEREDFDILCLQETKL----------------------QEK------DILTITKSLMDGYHYTYWTCSV--SKLGYSGTAIISRI---------KPISVRYGLGISEHDGEGRVVMVEFDSFFLLNVYVPNSGDGLKRLSYRITEWDPSLSNYMKELEKLKPVILTGDLNCAHQEIDIYNPAGNR--KSAGFTIEERQSFETNFLEK-----------------------------------GF-VDTFRQKHPDVVG-YTYWGYRHGGRKTNKGWRLDYFLVSDRMAE----------------------KVHDSYILP--DVGGSDHCPIGLVLKL 515
BLAST of mRNA_P-littoralis_Contig711.23.1 vs. uniprot
Match: A0A0A0LF64_CUCSA (DNA-(apurinic or apyrimidinic site) endonuclease n=4 Tax=Cucumis sativus TaxID=3659 RepID=A0A0A0LF64_CUCSA) HSP 1 Score: 197 bits (500), Expect = 1.260e-50 Identity = 136/376 (36.17%), Postives = 191/376 (50.80%), Query Frame = 3
Query: 684 RPRPLHPYTPQLRVLSWNVNGIRAQMEKEEGRQALKAIIAQERPHVLGLQETRVSAAXXXXXXXXXXXXXTAQKITQKKKASSSSDFMDIVNTILPDYD-TFWLSSVPPARQGYSGTALFVRKRRTWDIGCPKLLNVRGGIGHREGDLEGRVTTAEFDVAFVVNVYTPNAGAGLKRLDFRTLEWDRAFAAYVRGLEKMKPVVVMGDMNVAHEDKDFYNPEQKRMRKAAGTTPEERRSFAVNLLGRDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSDGFLVDTFRERHPDASGVFSYWSVRAGNRPVNRGMRLDYCLASPALARGGSGGXXXXXXXXXXXXXXXRGVVHDAFVLDRDTVGVSDHCPVGVVLRL 1808
RP+PL T +++LSWNVNG+RA ++ G A++ + +E VL LQET++ Q+K D ++I +++ Y T+W SV ++ GYSGTA+ R K ++VR G+G E D EGRV EFD F++NVY PN+G GLKRL +R +WD + + Y++ LEK KPV++ GD+N AH++ D YNP R K+AG T EER+SF N L + GF VDTFR++HPD G ++YW R G R N+G RLDY L S +A VHD+++L VG SDHCP+G+VL+L
Sbjct: 232 RPKPLSKDTKSVKILSWNVNGLRALLK---GSSAVE-LAEREDFDVLCLQETKL----------------------QEK------DILNITKSLVDGYHYTYWTCSV--SKLGYSGTAIISRI---------KPISVRYGLGISEHDGEGRVVMVEFDSFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYIKELEKSKPVILTGDLNCAHQEIDLYNPAGNR--KSAGFTNEERQSFETNFLQK-----------------------------------GF-VDTFRQKHPDVVG-YTYWGYRHGGRKTNKGWRLDYFLVSERVAE----------------------KVHDSYILP--DVGGSDHCPIGLVLKL 501
BLAST of mRNA_P-littoralis_Contig711.23.1 vs. uniprot
Match: A0A1R3IU59_9ROSI (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3IU59_9ROSI) HSP 1 Score: 196 bits (499), Expect = 3.370e-50 Identity = 140/378 (37.04%), Postives = 192/378 (50.79%), Query Frame = 3
Query: 678 TKRPRPLHPYTPQLRVLSWNVNGIRAQMEKEEGRQALKAIIAQERPHVLGLQETRVSAAXXXXXXXXXXXXXTAQKITQKKKASSSSDFMDIVNTILPDYD-TFWLSSVPPARQGYSGTALFVRKRRTWDIGCPKLLNVRGGIGHREGDLEGRVTTAEFDVAFVVNVYTPNAGAGLKRLDFRTLEWDRAFAAYVRGLEKMKPVVVMGDMNVAHEDKDFYNPEQKRMRKAAGTTPEERRSFAVNLLGRDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSDGFLVDTFRERHPDASGVFSYWSVRAGNRPVNRGMRLDYCLASPALARGGSGGXXXXXXXXXXXXXXXRGVVHDAFVLDRDTVGVSDHCPVGVVLRL 1808
T RP P T ++VLSWNVNG+RA + K EG AL+ + +E VL QET++ A I +++K D I ++++ YD +FW S + GYSGTA+ R D LL VR G+G + D EGRV TAEFD +++ VY PN+G GLKRL +R EWD + + Y++ LEK KPV++ GD+N AHE+ D YNP + ++AG T EER+SF N L R LVDTFR++HP G ++YW R G R N+G RLDY L S A+A VHD+++L D +G SDHCP+G++L+L
Sbjct: 238 TMRPAPPTGSTKYVKVLSWNVNGLRALL-KLEGFSALQ-LAKRENFDVLCFQETKLQAKFSKYEMHVL--------IFEQEK-----DVESIRHSLIEGYDNSFWTCS--NTKLGYSGTAIISRMVLK-DYSIKFLLLVRYGLGISDHDSEGRVVTAEFDSFYLLCVYVPNSGDGLKRLTYRINEWDPSLSNYIKELEKSKPVILTGDLNCAHEEIDIYNPAGNK--RSAGFTIEERQSFGTNFLSRG------------------------------------LVDTFRKQHPGVVG-YTYWGYRHGGRKTNKGWRLDYFLVSEAIADN----------------------VHDSYILP-DVLG-SDHCPIGLILKL 534
BLAST of mRNA_P-littoralis_Contig711.23.1 vs. uniprot
Match: UPI001FB0E5BA (DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB0E5BA) HSP 1 Score: 195 bits (495), Expect = 6.780e-50 Identity = 139/383 (36.29%), Postives = 191/383 (49.87%), Query Frame = 3
Query: 678 TKRPRPLHPYTPQLRVLSWNVNGIRAQMEKEEGRQALKAIIAQERPH-----VLGLQETRVSAAXXXXXXXXXXXXXTAQKITQKKKASSSSDFMDIVNTILPDYD-TFWLSSVPPARQGYSGTALFVRKRRTWDIGCPKLLNVRGGIGHREGDLEGRVTTAEFDVAFVVNVYTPNAGAGLKRLDFRTLEWDRAFAAYVRGLEKMKPVVVMGDMNVAHEDKDFYNPEQKRMRKAAGTTPEERRSFAVNLLGRDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSDGFLVDTFRERHPDASGVFSYWSVRAGNRPVNRGMRLDYCLASPALARGGSGGXXXXXXXXXXXXXXXRGVVHDAFVLDRDTVGVSDHCPVGVVLRL 1808
T RP PL T ++++SWNVNG+RA ++ LK+ AQE VL LQET++ Q+K S I ++L Y+ +FW SV ++ GYSGTA+ R K L+ R G+G + D EGR+ T EF+ +++N Y PN+G GLKRL +RT +WD + + Y++ LEK KPVV+ GD+N AHE+ D YNP+ + K+AG T EER+SF +N L S GF VDTFR++HP G +SYW R G R NRG RLDY L S ++A VHD+++L D G SDHCP+G+VL+L
Sbjct: 235 TMRPLPLRTDTKSIKLMSWNVNGLRALLK-------LKSFSAQELAKREDIDVLCLQETKL----------------------QEKDVES------IKESLLEGYENSFWTCSV--SKLGYSGTAIISRL---------KPLSTRYGLGTTDHDSEGRLVTVEFETFYLLNAYVPNSGDGLKRLSYRTTQWDLSLSNYMKELEKSKPVVLTGDLNCAHEEIDIYNPDGNK--KSAGFTDEERQSFQLNFL-----------------------------------SKGF-VDTFRKQHPGVVG-YSYWGYRHGGRKTNRGWRLDYFLVSKSIAD----------------------QVHDSYILP-DVTG-SDHCPIGLVLKL 508 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig711.23.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig711.23.1 >prot_P-littoralis_Contig711.23.1 ID=prot_P-littoralis_Contig711.23.1|Name=mRNA_P-littoralis_Contig711.23.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=578bp MVAIVRSRATPTSSSSSSILFFLLMAFMSFGTKEGALLAAIAGNPLKHALback to top mRNA from alignment at P-littoralis_Contig711:88053..94208+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig711.23.1 ID=mRNA_P-littoralis_Contig711.23.1|Name=mRNA_P-littoralis_Contig711.23.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6156bp|location=Sequence derived from alignment at P-littoralis_Contig711:88053..94208+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig711:88053..94208+ >mRNA_P-littoralis_Contig711.23.1 ID=mRNA_P-littoralis_Contig711.23.1|Name=mRNA_P-littoralis_Contig711.23.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1734bp|location=Sequence derived from alignment at P-littoralis_Contig711:88053..94208+ (Pylaiella littoralis U1_48)back to top |