mRNA_P-littoralis_Contig710.24.15 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig710.24.15
Unique Name	mRNA_P-littoralis_Contig710.24.15
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig710.24.15 vs. uniprot
Match: A0A6H5JDE6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDE6_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 1.050e-42
Identity = 91/178 (51.12%), Postives = 117/178 (65.73%), Query Frame = 2

Query:  401 SCVVASVAVASGVAYTA---HAPKIRQQIHEPRRLS*ADHLTDLEEHNCFSRYNRMPVETFEKLVELLRPSLERNAHMACVRTKSGVISVHIRVAMAIRMLAGGSYTDIALLFGVAIPTAFLIMWQVIDAIKKTPAVGPFYFPQT-EECAQAAGKWKGLSTNGVFNHVVAVVDGFFIR 922
            + VVA+V + + V  T     APK RQ IHEPRRL   +H+ D+     F R  RM   +F+KL ELLRP LERN + A +RT SG + V IR+A+A+RM AG SY D+ALLFG+A  + F +MWQV+DAI  TP VGPF+FPQT EEC + A +W+  ST G F   VA  DG F++
Sbjct:   35 NAVVATVLLLTVVTSTVTQRFAPKARQPIHEPRRLDWEEHVKDVRRRKLFRRMYRMEEHSFDKLAELLRPILERNDYSARLRTSSGAVPVKIRLAVALRMFAGASYIDVALLFGIAKESVFNVMWQVVDAINNTPTVGPFFFPQTVEECTRQAREWEVKSTGGAFAGCVAAGDGLFVK 212

[Close]

BLAST of mRNA_P-littoralis_Contig710.24.15 vs. uniprot
Match: A0A6H5L386_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L386_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 1.350e-42
Identity = 84/165 (50.91%), Postives = 113/165 (68.48%), Query Frame = 2

Query:  431 SGVAYTAHAPKIRQQIHEPRRLS*ADHLTDLEEHNCFSRYNRMPVETFEKLVELLRPSLERNAHMACVRTKSGVISVHIRVAMAIRMLAGGSYTDIALLFGVAIPTAFLIMWQVIDAIKKTPAVGPFYFPQTE-ECAQAAGKWKGLSTNGVFNHVVAVVDGFFIR 922
            + VA+    P IR+ ++EP+RL   +H  DLEE +CF R  RMP   FEKL ELL P L  N H A +RT +G ISV IR+A+A+R+LAG SY D+A++FG+ +PT +  +W VIDAI  TP VG F+FPQTE +C   A ++K  STNG+F+  VA VDG F++
Sbjct:   47 TAVAHVMDQPAIRRPVYEPQRLDWDEHADDLEERDCFKRMYRMPRHAFEKLAELLAPLLTVNKHFAELRTLNGAISVQIRLAVALRILAGASYLDVAVMFGLGLPTVYATLWMVIDAINSTPEVGAFFFPQTEFDCRGHAARFKRKSTNGIFSFCVACVDGLFVK 211

[Close]

BLAST of mRNA_P-littoralis_Contig710.24.15 vs. uniprot
Match: A0A6H5JT08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT08_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 8.370e-42
Identity = 98/204 (48.04%), Postives = 134/204 (65.69%), Query Frame = 2

Query:  323 EAPALAGASIGTFKEATQQLDHFCSHSCVVASVAVASGVAYTAHAPKIRQQIHEPRRLS*ADHLTDLEEHNCFSRYNRMPVETFEKLVELLRPSLERNAHMACVRTK-SGVISVHIRVAMAIRMLAGGSYTDIALLFGVAIPTAFLIMWQVIDAIKKTPAVGPFYFPQTEE-CAQAAGKWKGLSTNGVFNHVVAVVDGFFIRCK 928
            EA   A A++     A  ++ H    S V ASV VA+G A+ AH P+ R+ I+EP+RL  A H  DL++   + R  RM   +F +LVELLRPSL  NA    +R+  +G I+V +RVA+A+R+LAG SY D+AL+FG+++PT + I+W VIDAI KTPAVG F FP TEE C + A ++K  ST+G+   VVA VDG FI+ K
Sbjct:  199 EASRAAKAALA----ANDEISHSPGSSVVAASV-VAAGEAHRAHRPQEREPIYEPKRLPWAQHEADLDKRQGWRRSYRMVKASFHRLVELLRPSLAVNAFFGALRSPINGAIAVEVRVAVALRILAGASYWDVALMFGLSVPTTYQILWSVIDAINKTPAVGAFDFPLTEEGCMRNANRFKEKSTDGIICWVVAAVDGLFIKAK 397

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BLAST of mRNA_P-littoralis_Contig710.24.15 vs. uniprot
Match: A0A6H5KUP3_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUP3_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 1.920e-41
Identity = 87/170 (51.18%), Postives = 118/170 (69.41%), Query Frame = 2

Query:  425 VASGVAYTAHAPKIRQQIHEPRRLS*ADHLTDLEEHNCFSRYNRMPVETFEKLVELLRPSLERNAHMACVRTK-SGVISVHIRVAMAIRMLAGGSYTDIALLFGVAIPTAFLIMWQVIDAIKKTPAVGPFYFPQTEE-CAQAAGKWKGLSTNGVFNHVVAVVDGFFIRCK 928
            VA+G A+ A  P+ R+ I+EP+RL  A H  DL++     R  RM   +F KLVELLRPSL  NA    +R+  +G I+V +RVA+A+R+LAG  Y D+AL+FG+++PT + I+W VIDAI KTPAVG F FP TEE C + A ++K  ST+G+F+ VVA VDG FI+ K
Sbjct:    2 VAAGEAHRARCPQEREPIYEPKRLPWAQHEADLDKRQGRRRSYRMEKASFHKLVELLRPSLAVNAFFGALRSPINGAIAVEVRVAVALRILAGARYWDVALMFGLSVPTTYQILWSVIDAINKTPAVGAFDFPLTEEGCMRNANRFKKKSTDGIFSWVVAAVDGLFIKAK 171

[Close]

BLAST of mRNA_P-littoralis_Contig710.24.15 vs. uniprot
Match: A0A6H5JHK3_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHK3_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 1.230e-40
Identity = 83/175 (47.43%), Postives = 114/175 (65.14%), Query Frame = 2

Query:  401 SCVVASVAVASGVAYTAHAPKIRQQIHEPRRLS*ADHLTDLEEHNCFSRYNRMPVETFEKLVELLRPSLERNAHMACVRTKSGVISVHIRVAMAIRMLAGGSYTDIALLFGVAIPTAFLIMWQVIDAIKKTPAVGPFYFPQT-EECAQAAGKWKGLSTNGVFNHVVAVVDGFFIR 922
            + +V  + V +     + APK R  IHEPRRL   +H+ D++    F R  RM   +F KL ELLRP LE N   A  RT+SG + V IR+A+A+RMLAG SY D+A+LFG+A  T F ++W+V+DAI  TP VG F+FPQT ++CA+ A +W+  ST GVF+  VA  DG F++
Sbjct:   39 AAIVLVLTVVTTTVVQSFAPKARLPIHEPRRLDWEEHVRDIKRRGVFRRMYRMEEHSFNKLAELLRPFLESNDFYARKRTRSGAVPVKIRLAVALRMLAGASYLDVAVLFGIAKETVFHVLWEVVDAINNTPEVGAFFFPQTRDDCARQAKEWEAKSTGGVFSGCVAAGDGLFVK 213

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BLAST of mRNA_P-littoralis_Contig710.24.15 vs. uniprot
Match: A0A6H5JMM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMM2_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 7.690e-39
Identity = 80/175 (45.71%), Postives = 110/175 (62.86%), Query Frame = 2

Query:  401 SCVVASVAVASGVAYTAHAPKIRQQIHEPRRLS*ADHLTDLEEHNCFSRYNRMPVETFEKLVELLRPSLERNAHMACVRTKSGVISVHIRVAMAIRMLAGGSYTDIALLFGVAIPTAFLIMWQVIDAIKKTPAVGPFYFPQT-EECAQAAGKWKGLSTNGVFNHVVAVVDGFFIR 922
            + +V  + V +     + A K R  IHEPRRL   +H+ D++    F R  RM   +F KL +LLRP LE N   A  RT SG + V I +A+A+RMLAG SY D+A+LFG+A  T F  +W+V+DAI  TP VG F+FPQT ++CA+ A +W+  ST GVF+  VA  DG F++
Sbjct:   39 AAIVLVLTVVTTTVVQSFATKARLPIHEPRRLDWEEHVRDIKRRGVFRRMYRMEEHSFNKLAQLLRPFLESNDFYARKRTGSGAVPVKISLAVALRMLAGASYLDVAVLFGIAKETVFHALWEVVDAINNTPEVGAFFFPQTRDDCARQAKEWEAKSTGGVFSGCVAAGDGLFVK 213

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BLAST of mRNA_P-littoralis_Contig710.24.15 vs. uniprot
Match: A0A6H5JLV6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLV6_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 1.700e-38
Identity = 87/176 (49.43%), Postives = 121/176 (68.75%), Query Frame = 2

Query:  407 VVASVAVASGVAYTAHAPKIRQQIHEPRRLS*ADHLTDLEEHNCFSRYNRMPVETFEKLVELLRPSLERNAHMACVRT-KSGVISVHIRVAMAIRMLAGGSYTDIALLFGVAIPTAFLIMWQVIDAIKKTPAVGPFYFPQTEE-CAQAAGKWKGLSTNGVFNHVVAVVDGFFIRCK 928
            VVA+  VA+G A+ AH P+ RQ I+EP+RL  A H  DL++ + + R  RM   +F KLVELLRPSL+ NA    +R+ ++G I+V +RVA+A+R+L   S  DI L+FG+++P  + I+W+VIDAI  TPAVG F FP TEE C + A ++   ST+GVF+ VV  VDG FI+ K
Sbjct:   18 VVAAGVVAAGEAHRAHCPQKRQPIYEPKRLPWAQHEADLDQRHGWRRSYRMEKGSFHKLVELLRPSLDVNAFFGALRSPRNGAIAVEVRVAVALRILDRASCRDITLMFGLSVPVTYQILWEVIDAINNTPAVGAFDFPLTEEGCMRNAFRFMDTSTDGVFSWVVPAVDGLFIKAK 193

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BLAST of mRNA_P-littoralis_Contig710.24.15 vs. uniprot
Match: A0A6H5KNZ9_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNZ9_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 1.790e-38
Identity = 84/176 (47.73%), Postives = 123/176 (69.89%), Query Frame = 2

Query:  407 VVASVAVASGVAYTAHAPKIRQQIHEPRRLS*ADHLTDLEEHNCFSRYNRMPVETFEKLVELLRPSLERNAHMACVRT-KSGVISVHIRVAMAIRMLAGGSYTDIALLFGVAIPTAFLIMWQVIDAIKKTPAVGPFYFPQTEE-CAQAAGKWKGLSTNGVFNHVVAVVDGFFIRCK 928
            VVA+  VA+G A+ AH P+ R+ I+EP+RL  A H  DL++   + R  R+   +F KLVELLRPSLE  A    +R+ ++G I+V +RVA+A+ +LA  SY D+ L+FG+++   +L++W+VIDAI  TPAVGPF FP TE+ C + A ++K  ST+G+F+ VVA VDG FI+ +
Sbjct:   51 VVAAGVVAAGEAHRAHCPQEREPINEPKRLPWAQHEADLDKRRGWRRSYRLEKGSFHKLVELLRPSLEVIAFFGALRSPRNGAIAVEVRVAVALTILADASYWDVLLMFGLSVAVTYLVLWEVIDAINNTPAVGPFAFPLTEKGCMRNANRFKDKSTDGIFSWVVAAVDGLFIKAE 226

[Close]

BLAST of mRNA_P-littoralis_Contig710.24.15 vs. uniprot
Match: A0A6H5KEZ6_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEZ6_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 3.090e-37
Identity = 80/165 (48.48%), Postives = 103/165 (62.42%), Query Frame = 2

Query:  431 SGVAYTAHAPKIRQQIHEPRRLS*ADHLTDLEEHNCFSRYNRMPVETFEKLVELLRPSLERNAHMACVRTKSGVISVHIRVAMAIRMLAGGSYTDIALLFGVAIPTAFLIMWQVIDAIKKTPAVGPFYFPQTE-ECAQAAGKWKGLSTNGVFNHVVAVVDGFFIR 922
            + VA  A A K R  IHEPRRL   DH  DL++   F R  RM    F KL  LL P L+RN + A  R + G +   IR+A+ +RM+AG SY D+A+LFGV+  T F I+WQV+DAI  T  VGPF+FPQ+E EC + A +W+  ST G F  VVA  DG F++
Sbjct:   54 TSVAVHASANKTRAAIHEPRRLVWEDHAADLKKRKLFRRMYRMEEPVFNKLAGLLEPILQRNDYDARKRYRRGAVPTKIRLAIGLRMMAGASYLDVAVLFGVSKETVFSILWQVVDAINSTAEVGPFFFPQSEDECTRQAAEWEEKSTGGAFQGVVAAGDGLFVK 218

[Close]

BLAST of mRNA_P-littoralis_Contig710.24.15 vs. uniprot
Match: A0A6H5JUE6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUE6_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 3.700e-37
Identity = 87/178 (48.88%), Postives = 113/178 (63.48%), Query Frame = 2

Query:  407 VVASVAVASGVAYTA-HA----PKIRQQIHEPRRLS*ADHLTDLEEHNCFSRYNRMPVETFEKLVELLRPSLERNAHMACVRTKSGVISVHIRVAMAIRMLAGGSYTDIALLFGVAIPTAFLIMWQVIDAIKKTPAVGPFYFPQT-EECAQAAGKWKGLSTNGVFNHVVAVVDGFFIR 922
            +VA VA A  VA T  HA     K R  +HEPRRL   +H+ DL     F R  RM    F+KL +LLRP LERN   A  RT+ G + V  R+A+A+R+LAG SY D+A+LFG+A  T F ++W+V+DAI  TP VGPF+FPQT EECA+ A +W+  ST G  +  VA  DG F++
Sbjct:   38 LVALVATAFVVAATVFHALNPKAKARLPVHEPRRLDWDEHVRDLRRRKVFRRTYRMEEGCFDKLADLLRPILERNDFYARKRTRHGAVPVKHRLAVALRILAGASYMDVAVLFGIAKETVFHVLWEVVDAINNTPEVGPFFFPQTVEECARQAKEWEAKSTGGAISGCVAAGDGLFVK 215

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig710.24.15 vs. uniprot

BLAST of mRNA_P-littoralis_Contig710.24.15 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JDE6_9PHAE	1.050e-42	51.12	DDE Tnp4 domain-containing protein n=1 Tax=Ectocar...	[more]
A0A6H5L386_9PHAE	1.350e-42	50.91	DDE Tnp4 domain-containing protein (Fragment) n=1 ...	[more]
A0A6H5JT08_9PHAE	8.370e-42	48.04	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KUP3_9PHAE	1.920e-41	51.18	DDE Tnp4 domain-containing protein n=1 Tax=Ectocar...	[more]
A0A6H5JHK3_9PHAE	1.230e-40	47.43	DDE Tnp4 domain-containing protein n=1 Tax=Ectocar...	[more]
A0A6H5JMM2_9PHAE	7.690e-39	45.71	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JLV6_9PHAE	1.700e-38	49.43	DDE Tnp4 domain-containing protein n=1 Tax=Ectocar...	[more]
A0A6H5KNZ9_9PHAE	1.790e-38	47.73	DDE Tnp4 domain-containing protein n=2 Tax=Ectocar...	[more]
A0A6H5KEZ6_9PHAE	3.090e-37	48.48	DDE Tnp4 domain-containing protein (Fragment) n=1 ...	[more]
A0A6H5JUE6_9PHAE	3.700e-37	48.88	DDE Tnp4 domain-containing protein n=3 Tax=Ectocar...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig710	contig	P-littoralis_Contig710:87263..91866 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Seed ortholog	159749.K0SID8
PFAMs	DDE_Tnp_4
Model size	2343
Max annot lvl	2759\|Eukaryota
Hectar predicted targeting category	other localisation
Exons	3
Evalue	3.24e-06
EggNOG OGs	KOG4585@1\|root,KOG4585@2759\|Eukaryota
Description	nuclease activity
Cds size	531
COG category	B

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680791485.3502712-UTR-P-littoralis_Contig710:87262..88518	1680791485.3502712-UTR-P-littoralis_Contig710:87262..88518	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig710 87263..88518 -
1680791485.4002728-UTR-P-littoralis_Contig710:91310..91866	1680791485.4002728-UTR-P-littoralis_Contig710:91310..91866	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig710 91311..91866 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680791485.3651736-CDS-P-littoralis_Contig710:88518..88746	1680791485.3651736-CDS-P-littoralis_Contig710:88518..88746	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig710 88519..88746 -
1680791485.3782177-CDS-P-littoralis_Contig710:89662..89892	1680791485.3782177-CDS-P-littoralis_Contig710:89662..89892	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig710 89663..89892 -
1680791485.3886073-CDS-P-littoralis_Contig710:91237..91310	1680791485.3886073-CDS-P-littoralis_Contig710:91237..91310	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig710 91238..91310 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig710.24.15	prot_P-littoralis_Contig710.24.15	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig710 88519..91310 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig710:87263..91866-
coding sequence from alignment at P-littoralis_Contig710:87263..91866-

protein sequence of mRNA_P-littoralis_Contig710.24.15

>prot_P-littoralis_Contig710.24.15 ID=prot_P-littoralis_Contig710.24.15|Name=mRNA_P-littoralis_Contig710.24.15|organism=Pylaiella littoralis U1_48|type=polypeptide|length=177bp
MPVETFEKLVELLRPSLERNAHMACVRTKSGVISVHIRVAMAIRMLAGGS
YTDIALLFGVAIPTAFLIMWQVIDAIKKTPAVGPFYFPQTEECAQAAGKW
KGLSTNGVFNHVVAVVDGFFIRCKKVDGVKPSEGSAKTGKGRPTLTTDGR
LGGRPSRAARRHRREAGSRRRGLLCG*

mRNA from alignment at P-littoralis_Contig710:87263..91866-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig710.24.15 ID=mRNA_P-littoralis_Contig710.24.15|Name=mRNA_P-littoralis_Contig710.24.15|organism=Pylaiella littoralis U1_48|type=mRNA|length=4604bp|location=Sequence derived from alignment at P-littoralis_Contig710:87263..91866- (Pylaiella littoralis U1_48)
CACGGAACCACACCTAAAATACCTGTAGATAGGCGCCTTCAAAACCCAAG
TCATAAAAAAAAAACAGGTGTCCCCAAATTGTCCTCAATCGGGGTCAGGG
GGTGCAATGGGTTATTTTCTTCGAAATGGTTTTGAAGGATTCAAATAAAT
GTGAAATTGCGAAATTGCGAAGTAGAGGGCGCACACGAAACAGCGCATCT
GCCGCACACCCCAACAGAACTTCCAGCAGCTCGAGCCATTTCGCCTGTGC
CGGCGCTCAACTCAGCTACAGAAGTTTACACAGGGGCATCGCTAGGCTCC
TGTGCATCATGGTCGACACTAGGAAGCGCCGGCGCTCGCTGGGGCCTCGA
TCGGAACCTTCAAGGAGGCGACGCAACAGCTTGATCATTTCTGCTCTCAC
AGCTGTGTCGTTGCTTCTGTCGCTGTTGCAAGCGGAGTGGCATACACCGC
CCATGCTCCCAAGATCAGGCAACAGATCCACGAGCCCCGGCGTCTATCAT
GAGCGGATCACTTGACCGACCTAGAGGAGCATAACTGCTTCTCGCGCTAC
AACAGGATGCCGGTCGAGACTTTCGAGAAGCTTGTCGAGCTGCTCCGCCC
TTCCTTGGAGAGGAACGCACACATGGCATGTAAGAGAGTCACTGCTGTTT
TTTTCTGGTTGCACATCTCAGGGTAATATCAACCACGGTCATACTTTTGC
TGTACTGCAGCGCAGCCAAACACCCGCACCAGTCGAACATCAAAACCCAC
GCGTACGCACATATTTAACATCAGCTATACTTGAAAGCACAGCGCAACAG
GACAAACTTCACAAACGTTTTTTGCTGGTTGTATAGATGAGTACGAGTGC
GTATAGACTTTGATAAGAAGATTAAGATTTTCGTTTTGTGACTACTGTAC
ACGCTATACACGGGCTATCTCCTCCTACATGTGATACATACCGATACTTC
GTGCGTGAATACCACCACCTCTGCAGTTGTTTTTTGTGCGCGTGGGAATG
ACGAATACAGCAGTAGCAGCAGAAAGGCGTAAACACATAAGTATATAATA
TCAGCGGCAAAAAATATACGGAGTAGAAACACACGTACATCAAATCTTGA
CGTACTCGCACACAAGCTTTTTTTATGTATAGCAAGGTACAAGCCACACA
GGAGGACGAGTTTCACGCAGGCATAGTGATACCATACCATGTACACTTCG
CACCGACATGCGAACACCTCCCAACTTTTGTTACGCGTACGCACATATTT
AGCATCAGCCATACTTGGAAGCCCAGCGCAACGCAACAGGACGTAGTCTA
CTCCACAAACTTTTTCCCTGGATGTATATGACAACGAAGATTTGCGTTTT
GTTGTGACTGCTGTACACGGCCTGCTCTTCCTACATACATATGATACCGA
TACTTCGTGCTTGGTATATGATGAAAACCACCACCTCTGCAGTCCCTTGT
GCGCGTGATAATGACGGACACAGCAGTAGCAGCAGCAGCAGAAAGGCGCA
CACATACCAGCGGCAAAAATATCAGAAACATGTAGAAACACACGTAGACC
ATATCAAATCTTGACGGACGTACTCGCACACAAGAATGATTTTTTTTCTC
TAGCACCGCACCAACAGCAGTTCAAGGTACAAGCCACCACAGGAGGATTT
CCACTCAGGCGTAGTGATACCATATCATGCACACTTCGTACAGACATGCG
AACACCTCTCAACTTTTGCCCCCTGCTGGTATGTGTTGTGTGTGTTTCTC
TTGCTGTGTGTGTCCCCGTGTGACCTACTGCTGTGGGGTCAGGAGGGTTC
TTTATTTTCTTACGGGGTTCCCCGGCGTTCCACATTCTTCCTTTTCAATG
AATTTTCCATGTGCTTCCTCGGCACACTTTGTATCACCTAAAATGCTCGT
TGCTTCGAATATCGCGTAAGGCTGCTTTGCTGACCTCGATTCCTTCCTCT
TTCTATTGCGATGATGTCCTCCAGGTGTGCGCACTAAGAGCGGCGTTATC
AGTGTTCACATACGTGTTGCTATGGCTATCCGGATGCTTGCTGGCGGCTC
CTACACCGACATTGCGCTGCTCTTTGGCGTTGCAATCCCGACCGCCTTCT
TGATCATGTGGCAAGTGATCGATGCCATAAAGAAGACGCCGGCAGTGGGT
CCCTTTTACTTCCCGCAAACGGAGGAGTGCGCTCAGGCTGCAGGCAAATG
GAAGGTGTGTCTGCAAATGAGGTGTTGTTGTTCCTTTATTTTGCGTGTCA
AATTGTCATGACATGGGTACGGGTGCCAATGATTTTCTTGGTCAGTGTTC
TCAGTATACCATAAAACCCTTGGTTTCCCCCCACCATTCATGATTCCCCC
CCATCTACTTTTCAGCCGAAAAGCATGGAAACTTTGATTTCCCCCGGGAA
GAACGCAGAAAATAAGAAGAAAAAAAGCCCCCCCCCGGCATCCCGTGAAT
TTTTACCTTTGGTAGTTGCTTTTCGAAGACTTCCACCCGGGGTTGCTTGA
TTTTTCAACACTTTGTTGTGCTTTCGGTATCGTTGCACATGATTGTAGGG
GGTGCCACGTCTTTGTGTTCGGCCCTTGCACGGCATCCTCACGTGCTGTC
CTCCTTCCTTTTCCTCTTGAATTCTTGCTCTTATATCTTGTTCATGGCGG
GTTCGGCAAACTCTAGAGAGAGAGAGAGGCGCGCGTGTGTGTGTCCGTCT
GCTGTGGGCGTGATTTATGTATCAATTTTTTTTTTGTGCCTTCCTCCCAG
GGAAGAGTATCCGCCGGGGAAGATTCGAAAAATAAATGCCCCCCCCTCCC
CCGTCAGTTTACCCCCGAGGGGTCGTATTTAATAAAGAAAGATGCCCTCT
CCGGGAGTAAAAGAAATGTTTTTGCGGTACTCATTTTGCGGTACTCATCT
TACATTGATGTTCCCGAATTCAAACTAAACCGATCTTGAGATGCTAGTTT
ATGTTTTGTAACCGTTTGTTTCATATCTTCAGTCATACGACTCCCCCCTT
GAAGTTGTAGACACGCTTTCCTGACCCCGATCCCGACCCCTGATCCTCAC
CCCGGCGCGCGCTCCCCATCACCCACGACCCGCCTTTATTTTGCTTCGTA
TCCCACCACCCACCACGCAGGGACTGAGCACCAACGGCGTGTTCAATCAT
GTGGTGGCCGTTGTGGATGGTTTTTTCATCAGATGCAAGAAGGTCGATGG
AGTGAAGCCTTCTGAGGGGTCCGCGAAGACGGGCAAGGGGCGGCCGACCC
TTACCACTGACGGCAGGCTAGGGGGGCGTCCTTCTAGAGCAGCGCGCCGG
CACCGTCGAGAAGCGGGGAGTCGCCGGCGCGGCTTGCTCTGCGGATGATT
TTGGAGGACGGCAAGCAATGGCGCCCGGAGTACAACAGGCTGCGCAACTC
GTAAATACTGCACGGGTCTTATGGTGGCTGGCGTTTGCGATGTTTGGTTT
TTGTAGCGGGAAGAGGGGAGCGGAGCTGGCAGCAGATAGAGGGGGCGGAG
CTTGGTTCTGCATGCACGGGGGGGTAAGGGCATCGTCTCGTGCGTTGTTG
TGAATGCTTGGTTGAGCGGATTTGCCCCCCGCTTTATTTTTTCCTTTGGG
ATATAAGACAGATTTATTTGGTTAACCTTGTATGGGTGTTGATTCGATGT
CTTCAAGCTAAATTGATTTGTGCGATTGCCTTTACCTCCGTGAAGGGGGA
GCTGTGGTCTTTACCTTTTTTTTCGATAGCCTGATATCTGTCCGAGCGCA
CGCTTTTTTTTTTGTATTTTGTCTGGTACGATGTATGTAGTTGTTCGCGT
TTATGTGTCTCCCTCTCGAGATCTGTGTTATTTTGATCGGATCAATGTTA
TCTTCCGTGCTCAGTCAAGTGTAGTTTGAACAGTCGTTGTTGATACTACT
CTGTAATGTGATGTGACGATCACACAAGGTGTATGTGCTGTTTATGTGTC
TTTTTTTTCATTGGACATGACTCACGCAGCCACCTCGGCGGTGGTTGAGT
AGGGGTTTTTTAATTACACGGACGAGTCGTTCCGTTCCGAAATTACAGGT
GGTTTTCTTTCATCTCCCCGTCTCGTTGTGGTTTTTGTGTATGTAGCATT
CACCTGGAGGGATCAGGGCGAGTTCGCAATCAAAAAAAAGGATCAGCTAG
AAACGTGGGCCCCTGGATACACGTAGAACTTGAAATGCGATTGGTTTCAT
ATTCAGATGCTGTCCATCAGGCATAAATAAAAATAAAAACTAAAACACTG
CAGTAGAAACCAAAGAAAGGTAATTTCACAGAAGGAAACGTGTGTGCAAC
AAAAATAATGGAGAAGCAGTGTGCGTTGGAGCGCCGCTTCTCAAATAACT
GCGTTAAGCCGTGTGCTTTGCTGTTTGATGGCGAAATGATATGCCCCCTG
CTTCACGGCAGTGCTGCTGCTGCTCCTGCTGCTGCTCCTGCTGCTGCTGC
AAAAACACAGCTGGTGGTGTGCTTGTGTGTGCCTCTCATCATTTTTCACA
AGAAAGGGACCCCAATAATAACGCGCCCCGACAAGATAGCCGTGCGCAAA
GGACACGGTCTGCGGTGAACCCAGCAGCAGTGGGTAGATGCTATTTACCC
CAAG

Coding sequence (CDS) from alignment at P-littoralis_Contig710:87263..91866-

>mRNA_P-littoralis_Contig710.24.15 ID=mRNA_P-littoralis_Contig710.24.15|Name=mRNA_P-littoralis_Contig710.24.15|organism=Pylaiella littoralis U1_48|type=CDS|length=531bp|location=Sequence derived from alignment at P-littoralis_Contig710:87263..91866- (Pylaiella littoralis U1_48)
ATGCCGGTCGAGACTTTCGAGAAGCTTGTCGAGCTGCTCCGCCCTTCCTT
GGAGAGGAACGCACACATGGCATGTGTGCGCACTAAGAGCGGCGTTATCA
GTGTTCACATACGTGTTGCTATGGCTATCCGGATGCTTGCTGGCGGCTCC
TACACCGACATTGCGCTGCTCTTTGGCGTTGCAATCCCGACCGCCTTCTT
GATCATGTGGCAAGTGATCGATGCCATAAAGAAGACGCCGGCAGTGGGTC
CCTTTTACTTCCCGCAAACGGAGGAGTGCGCTCAGGCTGCAGGCAAATGG
AAGGGACTGAGCACCAACGGCGTGTTCAATCATGTGGTGGCCGTTGTGGA
TGGTTTTTTCATCAGATGCAAGAAGGTCGATGGAGTGAAGCCTTCTGAGG
GGTCCGCGAAGACGGGCAAGGGGCGGCCGACCCTTACCACTGACGGCAGG
CTAGGGGGGCGTCCTTCTAGAGCAGCGCGCCGGCACCGTCGAGAAGCGGG
GAGTCGCCGGCGCGGCTTGCTCTGCGGATGA