prot_P-littoralis_Contig118.76.3 (polypeptide) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig118.76.3 vs. uniprot
Match: A0A6H5KMR3_9PHAE (Ribosomal RNA-processing protein 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMR3_9PHAE) HSP 1 Score: 529 bits (1362), Expect = 8.580e-189 Identity = 265/295 (89.83%), Postives = 288/295 (97.63%), Query Frame = 0
Query: 1 MSVSDHMIVVPGQEITSVQGYLRGHGTYVEEGTDGGPPRLLACVAGVVERVNKLISVRPIKTRYIGEVGDLVVGRVSEVQSKRWSVEIGAHKSAVLLLSSVNLPGGQQRMKTYEDQLQMRSFFQEHDLISAEVQQVNADGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPNTGVDLILGTNGNVWISRTPPEEWKGKEEGDASGTGSMAPKAETLTRQRKQHAETETLGDARTNICRVRNAIVALRNVFHLVTPDSIMAVYLKSVSLGLTPKGMLSGEAVLELTSKE 295
MS + H+IVVPGQEITSVQGYLRGHGTYVEEGTDGGPP+LLACVAGVVERVNKLISVRPIK+RYIGEVGDLVVGRV+EVQSKRWSVE+GAH+SAVL+LSSVNLPGGQQR++TYEDQLQMRSFFQEHDLISAEVQQVN+DGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLP+TGVD+ILGTNGNVWISRTPPEEWKGKEEGDA+GTGS+APKAETLTRQRKQHAETET+G+ RTNICRVRNAIVALRNVFHLVTP+SIM+VY +SV++GL PK MLSGEAVL LT+KE
Sbjct: 1 MSAAGHIIVVPGQEITSVQGYLRGHGTYVEEGTDGGPPKLLACVAGVVERVNKLISVRPIKSRYIGEVGDLVVGRVAEVQSKRWSVEVGAHRSAVLMLSSVNLPGGQQRIRTYEDQLQMRSFFQEHDLISAEVQQVNSDGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPDTGVDVILGTNGNVWISRTPPEEWKGKEEGDAAGTGSVAPKAETLTRQRKQHAETETIGEVRTNICRVRNAIVALRNVFHLVTPESIMSVYRRSVTMGLQPKDMLSGEAVLALTAKE 295
BLAST of mRNA_P-littoralis_Contig118.76.3 vs. uniprot
Match: D8LIC3_ECTSI (Ribosomal RNA-processing protein 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIC3_ECTSI) HSP 1 Score: 436 bits (1120), Expect = 2.430e-152 Identity = 218/237 (91.98%), Postives = 232/237 (97.89%), Query Frame = 0
Query: 1 MSVSDHMIVVPGQEITSVQGYLRGHGTYVEEGTDGGPPRLLACVAGVVERVNKLISVRPIKTRYIGEVGDLVVGRVSEVQSKRWSVEIGAHKSAVLLLSSVNLPGGQQRMKTYEDQLQMRSFFQEHDLISAEVQQVNADGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPNTGVDLILGTNGNVWISRTPPEEWKGKEEGDASGTGSMAPKAETLTRQRKQHAETETLG 237
MS + H+IVVPGQEITSVQGYLRGHGTYVEEGTDGGPP+LLACVAGVVERVNKLISVRPIK+RYIGEVGDLVVGRV+EVQSKRWSVE+GAH+SAVL+LSSVNLPGGQQRM+TYEDQLQMRSFFQEHDLISAEVQQVN+DGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLP+TGVD+ILGTNGNVWISRTPPEEWKGKEEGDA+GTGS+APKAETLTRQRKQHAET G
Sbjct: 1 MSAAGHIIVVPGQEITSVQGYLRGHGTYVEEGTDGGPPKLLACVAGVVERVNKLISVRPIKSRYIGEVGDLVVGRVTEVQSKRWSVEVGAHRSAVLMLSSVNLPGGQQRMRTYEDQLQMRSFFQEHDLISAEVQQVNSDGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPDTGVDVILGTNGNVWISRTPPEEWKGKEEGDAAGTGSVAPKAETLTRQRKQHAETVKSG 237
BLAST of mRNA_P-littoralis_Contig118.76.3 vs. uniprot
Match: A0A836CMW4_9STRA (Ribosomal RNA-processing protein 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMW4_9STRA) HSP 1 Score: 364 bits (935), Expect = 7.870e-124 Identity = 186/286 (65.03%), Postives = 224/286 (78.32%), Query Frame = 0
Query: 8 IVVPGQEITSVQGYLRGHGTYVEEGTDGGPPRLLACVAGVVERVNKLISVRPIKTRYIGEVGDLVVGRVSEVQSKRWSVEIGAHKSAVLLLSSVNLPGGQQRMKTYEDQLQMRSFFQEHDLISAEVQQVNADGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSL-PNTGVDLILGTNGNVWISRTPPEEWKG-KEEGDASGTGSMAPKAETLTRQRKQHAETETLGDARTNICRVRNAIVALRNVFHLVTPDSIMAVYLKSVSLGLTPKGMLSGEAVLEL 291
IVVPGQ IT+ G+LRGHGTY++E DGG P+L+ACVAGVVERVNKLISVRP+K+RYIGEVGDLVVGRV+EV KRW V++G H+ A+L+LSSVNLPGG QR +TYEDQLQMR+FF+E+DLISAEVQQ+ DG I LHTRSLKYGKLENGQL+ VP VL++RLKQH ++L P GVD++LGTNG VWI+R P EW G EG T + KAETL + R+ HAET L D R ICRVRNA+V L++ F L+TPD+I AVY +SV G+ K ML EA+ L
Sbjct: 4 IVVPGQVITAEGGFLRGHGTYIQESEDGGEPQLIACVAGVVERVNKLISVRPVKSRYIGEVGDLVVGRVTEVGGKRWKVDVGGHQDAILMLSSVNLPGGAQRKRTYEDQLQMRTFFKENDLISAEVQQIQQDGSIVLHTRSLKYGKLENGQLLRVPQVLVKRLKQHFITLAPPIGVDVVLGTNGRVWITRAMPAEWTGGTSEGADMDTNVLTSKAETLMQLRRLHAETPILRDERERICRVRNAVVTLQHAFALITPDAIAAVYARSVEAGMAAKDMLQAEALASL 289
BLAST of mRNA_P-littoralis_Contig118.76.3 vs. uniprot
Match: A0A1V9YN11_9STRA (Ribosomal RNA-processing protein 4 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YN11_9STRA) HSP 1 Score: 282 bits (722), Expect = 1.180e-91 Identity = 151/266 (56.77%), Postives = 193/266 (72.56%), Query Frame = 0
Query: 4 SDHMIVVPGQEITSVQGYLRGHGTYVEEGTDGGPPRLLACVAGVVERVNKLISVRPIKTRYIGEVGDLVVGRVSEVQSKRWSVEIGAHKSAVLLLSSVNLPGGQQRMKTYEDQLQMRSFFQEHDLISAEVQQVNADGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPNTGVDLILGTNGNVWISRTPPEEWKGKEEGDASGTGSMAPKAETLTRQRKQHAETETLGDARTNICRVRNAIVALRNVFHLVTPDSIMAVY 269
+ +++V PGQ ITS G+LRGHGTYVE G LLA VAGVVE+VN+L+SVRP+ +RYIGEVGD+VVGR+SEV SKRW V+I + AVL+LSSVNLPGG QR +TYEDQLQMRSFF+E +LISAEVQ+V DG + LHTRSL+YGKLENGQL++V P L++RLKQH++ LP G+D+ILG NG +W+SR+ E DA + +A+ T ++ HA T T + R I +V NAI L F +TP+SIMA+Y
Sbjct: 27 AQYVVVTPGQVITSEPGFLRGHGTYVENG------ELLASVAGVVEKVNQLVSVRPLVSRYIGEVGDIVVGRISEVGSKRWKVDINGQQDAVLMLSSVNLPGGAQRRRTYEDQLQMRSFFEESELISAEVQEVRYDGTMWLHTRSLRYGKLENGQLITVQPSLVKRLKQHMLQLP-IGIDVILGCNGYIWVSRS--------IEHDAESLTTNESRADVWTERKATHAATVTSAEDRKKIAKVTNAIAQLNTRFQTITPESIMALY 277
BLAST of mRNA_P-littoralis_Contig118.76.3 vs. uniprot
Match: A0A5D6Y3M5_9STRA (Ribosomal RNA-processing protein 4 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3M5_9STRA) HSP 1 Score: 278 bits (710), Expect = 8.800e-90 Identity = 150/268 (55.97%), Postives = 195/268 (72.76%), Query Frame = 0
Query: 4 SDHMIVV-PGQEITSVQG-YLRGHGTYVEEGTDGGPPRLLACVAGVVERVNKLISVRPIKTRYIGEVGDLVVGRVSEVQSKRWSVEIGAHKSAVLLLSSVNLPGGQQRMKTYEDQLQMRSFFQEHDLISAEVQQVNADGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPNTGVDLILGTNGNVWISRTPPEEWKGKEEGDASGTGSMAPKAETLTRQRKQHAETETLGDARTNICRVRNAIVALRNVFHLVTPDSIMAVY 269
+ H++VV PGQ I++ G +LRGHGTY+ L+A VAGVVE+VN+LISVRP+ +RYIGEVGD+VVGRV+EV SKRW V++ + A L+LSSV LPGG QR +TYEDQLQMR+FF E+DLISAE+Q+V DG +ALHTRSL+YGKLENGQ V V P L++R+KQH+V+LP GVDLILGTNG +W++R+ G ++ G+M + E L +R+QHA T+ D R I RV A++ L F L+TP+SIMAVY
Sbjct: 22 AQHVVVVTPGQVISTETGAFLRGHGTYMSNN------ELVASVAGVVEKVNQLISVRPLASRYIGEVGDIVVGRVTEVASKRWKVDVNGQQDASLMLSSVTLPGGAQRRRTYEDQLQMRNFFVENDLISAEIQEVRYDGSLALHTRSLRYGKLENGQFVRVAPSLVKRVKQHMVTLPGIGVDLILGTNGYLWVTRSLAA--LGGDDHALDDAGNMETRVEILMEKRQQHAATKMSVDDRRKIARVHRALLQLNERFRLITPESIMAVY 281
BLAST of mRNA_P-littoralis_Contig118.76.3 vs. uniprot
Match: K3X3G6_GLOUD (Ribosomal RNA-processing protein 4 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3G6_GLOUD) HSP 1 Score: 278 bits (710), Expect = 1.630e-89 Identity = 147/265 (55.47%), Postives = 195/265 (73.58%), Query Frame = 0
Query: 7 MIVVPGQEITSVQG-YLRGHGTYVEEGTDGGPPRLLACVAGVVERVNKLISVRPIKTRYIGEVGDLVVGRVSEVQSKRWSVEIGAHKSAVLLLSSVNLPGGQQRMKTYEDQLQMRSFFQEHDLISAEVQQVNADGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPNTGVDLILGTNGNVWISRTPPEEWKGKEEG-DASGTGSMAPKAETLTRQRKQHAETETLGDARTNICRVRNAIVALRNVFHLVTPDSIMAVY 269
++V PGQ I++ G +LRGHGTY++ T+ L+A V GVVE+VN+LI+VRP+ +RYIGEVGD+VVGR++EV +KRW V++ + A L+LSSV LPGG QR +TYEDQLQMR+FF E+DLISAE+Q+V DG ++LHTRSL+YGKLENGQ V V P L++R+KQH+V+LP GVDLILGTNG +W+SR+ G + D TG+M + E L +R+QHA T+ D R I RV A++ L F L+TP+SIMAVY
Sbjct: 39 VVVTPGQVISTETGAFLRGHGTYLDHQTN----ELIASVTGVVEKVNQLITVRPLVSRYIGEVGDIVVGRITEVANKRWKVDVNGQQDASLMLSSVTLPGGAQRRRTYEDQLQMRNFFVENDLISAEIQEVRYDGSLSLHTRSLRYGKLENGQFVQVAPHLVKRMKQHMVTLPGIGVDLILGTNGYLWLSRSFTALNGGDDSSMDDLSTGNMETRVEILMEKRQQHANTKMSVDDRKKIARVYRALLHLNEQFRLITPESIMAVY 299
BLAST of mRNA_P-littoralis_Contig118.76.3 vs. uniprot
Match: A0A067C1K3_SAPPC (Ribosomal RNA-processing protein 4 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C1K3_SAPPC) HSP 1 Score: 274 bits (700), Expect = 1.310e-88 Identity = 148/266 (55.64%), Postives = 189/266 (71.05%), Query Frame = 0
Query: 4 SDHMIVVPGQEITSVQGYLRGHGTYVEEGTDGGPPRLLACVAGVVERVNKLISVRPIKTRYIGEVGDLVVGRVSEVQSKRWSVEIGAHKSAVLLLSSVNLPGGQQRMKTYEDQLQMRSFFQEHDLISAEVQQVNADGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPNTGVDLILGTNGNVWISRTPPEEWKGKEEGDASGTGSMAPKAETLTRQRKQHAETETLGDARTNICRVRNAIVALRNVFHLVTPDSIMAVY 269
+ +++V PGQ ITS G+LRGHGTYVE G LLA VAGVVE+VN+L+SVRP+ +RYIGEVGD+VVGR+SEV SKRW V+I + AVL+LSSVNLPGG QR +TYEDQLQMRSFF+E +LISAEVQ+V DG + LHTRSL+YGKLENGQL++V P L++RLKQH++ LP G+D+ILG NG +WI+R + E DA + +A+ T ++ HA T T R I V N + L F +TP+SIM +Y
Sbjct: 6 AQYVVVTPGQVITSEPGFLRGHGTYVENG------ELLASVAGVVEKVNQLVSVRPLVSRYIGEVGDIVVGRISEVGSKRWKVDINGQQDAVLMLSSVNLPGGAQRRRTYEDQLQMRSFFEESELISAEVQEVRYDGTMWLHTRSLRYGKLENGQLIAVQPALVKRLKQHMLQLP-IGIDVILGCNGYIWIAR--------RIEHDAESLTTNESRADVWTERKATHAATPTDAADRKKIAAVYNVLSTLNAQFKTITPESIMELY 256
BLAST of mRNA_P-littoralis_Contig118.76.3 vs. uniprot
Match: A0A485LWE7_9STRA (Ribosomal RNA-processing protein 4 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LWE7_9STRA) HSP 1 Score: 274 bits (701), Expect = 1.960e-88 Identity = 151/263 (57.41%), Postives = 192/263 (73.00%), Query Frame = 0
Query: 4 SDHMIVVPGQEITSVQGYLRGHGTYVEEGTDGGPPRLLACVAGVVERVNKLISVRPIKTRYIGEVGDLVVGRVSEVQSKRWSVEIGAHKSAVLLLSSVNLPGGQQRMKTYEDQLQMRSFFQEHDLISAEVQQVNADGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPNTGVDLILGTNGNVWISRTPPEEWKGKEEGDASGTGSMAPKAETLTRQRKQHAETETLGDARTNICRVRNAIVALRNVFHLVTPDSIM 266
+ +++V PGQ ITS G+LRGHGTYVE+G LLA VAG+VE+VN+L+SVRP+ +RYIGEVGD+VVGR+SEV +KRW V+I + AVL+LSSVNLP G QR +T EDQLQMRSFFQE +LISAEVQ+V DG + LHTRSL+YGKLENGQL+ V P L++RLKQH+VSLPN GVD+ILG NG +WI R+ E E D + + A+ T +++ HA T T R NI RV NA+ L + F L++P+SIM
Sbjct: 27 AQYVVVTPGQVITSEPGFLRGHGTYVEDG------ELLASVAGIVEKVNQLVSVRPLVSRYIGEVGDIVVGRISEVGNKRWKVDINGQQDAVLMLSSVNLPSGAQRRRTTEDQLQMRSFFQEGELISAEVQEVRYDGTMWLHTRSLRYGKLENGQLIQVQPSLVKRLKQHMVSLPNLGVDVILGCNGYLWIMRS-METTTTAETAD-NAVNELT--ADAWTARKQAHATTATDVVDRQNIARVYNALAKLNSDFRLISPESIM 279
BLAST of mRNA_P-littoralis_Contig118.76.3 vs. uniprot
Match: A0A2D4BZY9_PYTIN (Ribosomal RNA-processing protein 4 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZY9_PYTIN) HSP 1 Score: 273 bits (699), Expect = 5.630e-88 Identity = 146/267 (54.68%), Postives = 197/267 (73.78%), Query Frame = 0
Query: 7 MIVVPGQEITSVQG-YLRGHGTYVEEGTDGGPPRLLACVAGVVERVNKLISVRPIKTRYIGEVGDLVVGRVSEVQSKRWSVEIGAHKSAVLLLSSVNLPGGQQRMKTYEDQLQMRSFFQEHDLISAEVQQVNADGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPNTGVDLILGTNGNVWISRTPPEEWKGKEE---GDASGTGSMAPKAETLTRQRKQHAETETLGDARTNICRVRNAIVALRNVFHLVTPDSIMAVY 269
++V PG+ I++ G +LRGHGTY+ L+A VAGVVE+VN+LI+VRP+ +RYIGEVGD+VVGRV+EV +KRW V++ + A L+LSSV LPGG QR +TYEDQLQMRSFF E+DLISAE+Q+V DG ++LHTRSL+YGKLENGQ V+V P L++R+KQH+V+LP GVD+ILGTNG +WISR+ G ++ + +G GSM + E LT +R++HA T+ + R I RV A++ L F ++TPDSI+AVY
Sbjct: 29 VVVTPGEVISTETGAFLRGHGTYLSNN------ELVASVAGVVEKVNQLITVRPLVSRYIGEVGDIVVGRVTEVGNKRWKVDVNGQQDAGLMLSSVTLPGGAQRRRTYEDQLQMRSFFVENDLISAEIQEVRYDGSLSLHTRSLRYGKLENGQFVAVRPSLVKRMKQHMVTLPTLGVDVILGTNGYLWISRS-LSALDGVDDVASTEDTGPGSMETRVEVLTHKRQRHAATKMSHEDREKIARVYRAVLQLNEQFRVITPDSILAVY 288
BLAST of mRNA_P-littoralis_Contig118.76.3 vs. uniprot
Match: A0A1V9YVZ5_9STRA (Ribosomal RNA-processing protein 4 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YVZ5_9STRA) HSP 1 Score: 273 bits (697), Expect = 6.940e-88 Identity = 148/264 (56.06%), Postives = 189/264 (71.59%), Query Frame = 0
Query: 6 HMIVVPGQEITSVQGYLRGHGTYVEEGTDGGPPRLLACVAGVVERVNKLISVRPIKTRYIGEVGDLVVGRVSEVQSKRWSVEIGAHKSAVLLLSSVNLPGGQQRMKTYEDQLQMRSFFQEHDLISAEVQQVNADGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPNTGVDLILGTNGNVWISRTPPEEWKGKEEGDASGTGSMAPKAETLTRQRKQHAETETLGDARTNICRVRNAIVALRNVFHLVTPDSIMAVY 269
+++V PGQ I+S G+LRGHGTYVE G LLA VAGVVE+VN+L+SVRP+ +RYIGEVGD+VVGR+SEV SKRW V+I + AVL+LSSVNLPGG QR +TYEDQLQMRSFF+E +LISAEVQ+V DG + LHTRSL+YGKLENGQL+ V P L++RLKQH++ LP G+D+ILG NG +WISR+ E D+ + +A+ T ++ HA+T T R I +V N I L F +TP+SIM +Y
Sbjct: 29 YVVVTPGQVISSEPGFLRGHGTYVENG------ELLASVAGVVEKVNQLVSVRPLVSRYIGEVGDIVVGRISEVGSKRWKVDINGQQDAVLMLSSVNLPGGAQRRRTYEDQLQMRSFFEECELISAEVQEVRYDGTMWLHTRSLRYGKLENGQLIVVQPALVKRLKQHMLQLP-IGIDVILGCNGYIWISRS--------IEHDSESLTTNESRADVWTERKATHAQTPTSAIDRKTIAKVYNVISTLNANFKTITPESIMEMY 277 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig118.76.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig118.76.3 ID=prot_P-littoralis_Contig118.76.3|Name=mRNA_P-littoralis_Contig118.76.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=296bpback to top |