prot_P-littoralis_Contig71.166.5 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig71.166.5
Unique Nameprot_P-littoralis_Contig71.166.5
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length702
Homology
BLAST of mRNA_P-littoralis_Contig71.166.5 vs. uniprot
Match: D8LH88_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH88_ECTSI)

HSP 1 Score: 300 bits (767), Expect = 4.970e-88
Identity = 318/730 (43.56%), Postives = 391/730 (53.56%), Query Frame = 0
Query:   16 SCRTPVLSFLRPQTCSISPRSRSPTMAKTCIVKRQAATAVPGGGVPNEKSEMKSAEQNKMAPSISAESKTTQQQR--SQPLPPGDRNTSKKVVPGAVSAAAAAKATAPXXXXXXKGASPS-ETQIGGGAVTKPFGQRGKEAEVSNTAAGAKAAAVATAVRGAD------------------------ISAAAGKPVGSTDASVEQEETXXXXXXXXXXXXXXXXXXXXPETTAAEKVLTLLDIGLVDKEEVAAYYEALSELERTTQEAKAATAAAATAASLNPQSASSSAPFTPQDGPLSLVPFPAVCAALGAAGTHSLHLTGGLGTALSVFGAMAGAALGSLVVIGDDATGRAARAAGSAVSRXXXXXXXXXXXXVSESVEEAVVKAPANFVAGLARSISNAVSAAVGP-----------VVALPGELAAKAVNGAKGALQDTSEAVVKIPGELARNVVNLXXXXXXXXXXXXXXXXXXXXETAFNAVKESPKEAAKRLTEAVSAPGVILTDFVKGVSVGRAGKREQGEKEQPAAASVSPPSENRESKMAASSKEDESEPEGIPVEELEAKMLSVQEALKRFDAVKNRIEEAQTSDTLLETVGMTRSTNVSAENEKSEKARAATKEAKDIPVE--KKEVTGSRRSSTPASKPRVTPSDRKP--IDQNRRKHVAERLLEKASQRATEAKAGLKAAAASARGEAEMADVAHLTAA---GAEQKAPQETVAS 700
            SC    LSFLRP   S+   S++P+ AKT + +RQAA  +PGG VP+ K E       + AP+    SKT+ Q    +Q  PP   +    V P   +  +             KGAS + +T   G A     G       V  +A   KAA  A   +G+                         +SA   + V +TD   E ++                     PETTAAEKVLTL++IGLVDKEE + YYEALS+LERTTQEAKA                S+S PF+PQ+GPLSLVPFPAVCAALGAAGTHSLHL G LGTA SVFGA+AG ALG LVVIGDD  GRAARAAG A++R      XXXXXX                                             V ALPG +A KA +GA+GALQDTSEA               XXXXXXXXXXXXXXXXXXXX                 L +AVS+PG  LT    G S   A + E  +K+   AA  +   +  ++  AA+S E++ EPEGIP++ELEAKM SV++AL+RFD VK+RIEEA TSDT+ +TV MTR  ++SAE EK+E+ARAA +   +  V   KK  +       P+     T    KP  +DQ+RRK VAE+LLEKASQRATEAKAGLKAAAAS+R EAE    A  TA    GA++K PQETVA+
Sbjct:   15 SCSESGLSFLRPHVSSLPHLSQAPS-AKTSVTRRQAAATIPGG-VPSGKLE-------RGAPT----SKTSDQSPFPNQSPPPXXXS----VNPTEATPGSXXXXXXXATQVKGKGASGTPKTAAAGKAAAASKGT------VGPSAVSPKAAVAAGTTQGSXXXXXXXXXXXXXXXXXXXXXXXXAVSAKEREEVTATDKPTEDKKKGLKAG---------------PETTAAEKVLTLVEIGLVDKEEASTYYEALSDLERTTQEAKAXXXXXXXXXXXXXXXXSAS-PFSPQEGPLSLVPFPAVCAALGAAGTHSLHLAGALGTAFSVFGAVAGVALGGLVVIGDDPLGRAARAAGLALARSAGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTALPGAVATKAADGARGALQDTSEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------LNDAVSSPGKTLTALASGASSLVAQQIESSKKKARPAAPAASTKKAPQASTAAASVEEKQEPEGIPIDELEAKMSSVRKALERFDTVKSRIEEANTSDTMRKTVSMTRGMDMSAEREKNEEARAAAERPNEARVNGNKKSTSARPGGEMPSVASTTTTRAPKPKTMDQDRRKQVAEKLLEKASQRATEAKAGLKAAAASSRREAENTQAASPTATPIGGADKKTPQETVAT 694          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig71.166.5 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LH88_ECTSI4.970e-8843.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 543..573
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 199..213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 499..545
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 589..701
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 632..656
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 590..618
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 187..214
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..17
score: 6.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig71contigP-littoralis_Contig71:631949..637416 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig71.166.5mRNA_P-littoralis_Contig71.166.5Pylaiella littoralis U1_48mRNAP-littoralis_Contig71 631234..637556 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig71.166.5 ID=prot_P-littoralis_Contig71.166.5|Name=mRNA_P-littoralis_Contig71.166.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=702bp
MVSIRRILAFAAVLCSCRTPVLSFLRPQTCSISPRSRSPTMAKTCIVKRQ
AATAVPGGGVPNEKSEMKSAEQNKMAPSISAESKTTQQQRSQPLPPGDRN
TSKKVVPGAVSAAAAAKATAPAAPAAGKGASPSETQIGGGAVTKPFGQRG
KEAEVSNTAAGAKAAAVATAVRGADISAAAGKPVGSTDASVEQEETTATA
GDKSTKKKKKGGLSAAPETTAAEKVLTLLDIGLVDKEEVAAYYEALSELE
RTTQEAKAATAAAATAASLNPQSASSSAPFTPQDGPLSLVPFPAVCAALG
AAGTHSLHLTGGLGTALSVFGAMAGAALGSLVVIGDDATGRAARAAGSAV
SRSASTAGGMAARSVSESVEEAVVKAPANFVAGLARSISNAVSAAVGPVV
ALPGELAAKAVNGAKGALQDTSEAVVKIPGELARNVVNLPVEVARQTAQA
AGGALQSTTETAFNAVKESPKEAAKRLTEAVSAPGVILTDFVKGVSVGRA
GKREQGEKEQPAAASVSPPSENRESKMAASSKEDESEPEGIPVEELEAKM
LSVQEALKRFDAVKNRIEEAQTSDTLLETVGMTRSTNVSAENEKSEKARA
ATKEAKDIPVEKKEVTGSRRSSTPASKPRVTPSDRKPIDQNRRKHVAERL
LEKASQRATEAKAGLKAAAASARGEAEMADVAHLTAAGAEQKAPQETVAS
P*
back to top