mRNA_P-littoralis_Contig118.76.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig118.76.3
Unique NamemRNA_P-littoralis_Contig118.76.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig118.76.3 vs. uniprot
Match: A0A6H5KMR3_9PHAE (Ribosomal RNA-processing protein 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMR3_9PHAE)

HSP 1 Score: 534 bits (1375), Expect = 5.390e-184
Identity = 265/295 (89.83%), Postives = 288/295 (97.63%), Query Frame = 2 
Query:  533 MSVSDHMIVVPGQEITSVQGYLRGHGTYVEEGTDGGPPRLLACVAGVVERVNKLISVRPIKTRYIGEVGDLVVGRVSEVQSKRWSVEIGAHKSAVLLLSSVNLPGGQQRMKTYEDQLQMRSFFQEHDLISAEVQQVNADGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPNTGVDLILGTNGNVWISRTPPEEWKGKEEGDASGTGSMAPKAETLTRQRKQHAETETLGDARTNICRVRNAIVALRNVFHLVTPDSIMAVYLKSVSLGLTPKGMLSGEAVLELTSKE 1417
            MS + H+IVVPGQEITSVQGYLRGHGTYVEEGTDGGPP+LLACVAGVVERVNKLISVRPIK+RYIGEVGDLVVGRV+EVQSKRWSVE+GAH+SAVL+LSSVNLPGGQQR++TYEDQLQMRSFFQEHDLISAEVQQVN+DGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLP+TGVD+ILGTNGNVWISRTPPEEWKGKEEGDA+GTGS+APKAETLTRQRKQHAETET+G+ RTNICRVRNAIVALRNVFHLVTP+SIM+VY +SV++GL PK MLSGEAVL LT+KE
Sbjct:    1 MSAAGHIIVVPGQEITSVQGYLRGHGTYVEEGTDGGPPKLLACVAGVVERVNKLISVRPIKSRYIGEVGDLVVGRVAEVQSKRWSVEVGAHRSAVLMLSSVNLPGGQQRIRTYEDQLQMRSFFQEHDLISAEVQQVNSDGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPDTGVDVILGTNGNVWISRTPPEEWKGKEEGDAAGTGSVAPKAETLTRQRKQHAETETIGEVRTNICRVRNAIVALRNVFHLVTPESIMSVYRRSVTMGLQPKDMLSGEAVLALTAKE 295
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BLAST of mRNA_P-littoralis_Contig118.76.3 vs. uniprot
Match: D8LIC3_ECTSI (Ribosomal RNA-processing protein 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIC3_ECTSI)

HSP 1 Score: 437 bits (1123), Expect = 2.330e-146
Identity = 218/237 (91.98%), Postives = 232/237 (97.89%), Query Frame = 2 
Query:  533 MSVSDHMIVVPGQEITSVQGYLRGHGTYVEEGTDGGPPRLLACVAGVVERVNKLISVRPIKTRYIGEVGDLVVGRVSEVQSKRWSVEIGAHKSAVLLLSSVNLPGGQQRMKTYEDQLQMRSFFQEHDLISAEVQQVNADGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPNTGVDLILGTNGNVWISRTPPEEWKGKEEGDASGTGSMAPKAETLTRQRKQHAETETLG 1243
            MS + H+IVVPGQEITSVQGYLRGHGTYVEEGTDGGPP+LLACVAGVVERVNKLISVRPIK+RYIGEVGDLVVGRV+EVQSKRWSVE+GAH+SAVL+LSSVNLPGGQQRM+TYEDQLQMRSFFQEHDLISAEVQQVN+DGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLP+TGVD+ILGTNGNVWISRTPPEEWKGKEEGDA+GTGS+APKAETLTRQRKQHAET   G
Sbjct:    1 MSAAGHIIVVPGQEITSVQGYLRGHGTYVEEGTDGGPPKLLACVAGVVERVNKLISVRPIKSRYIGEVGDLVVGRVTEVQSKRWSVEVGAHRSAVLMLSSVNLPGGQQRMRTYEDQLQMRSFFQEHDLISAEVQQVNSDGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPDTGVDVILGTNGNVWISRTPPEEWKGKEEGDAAGTGSVAPKAETLTRQRKQHAETVKSG 237
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BLAST of mRNA_P-littoralis_Contig118.76.3 vs. uniprot
Match: A0A836CMW4_9STRA (Ribosomal RNA-processing protein 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMW4_9STRA)

HSP 1 Score: 368 bits (945), Expect = 2.930e-119
Identity = 186/289 (64.36%), Postives = 225/289 (77.85%), Query Frame = 2 
Query:  554 IVVPGQEITSVQGYLRGHGTYVEEGTDGGPPRLLACVAGVVERVNKLISVRPIKTRYIGEVGDLVVGRVSEVQSKRWSVEIGAHKSAVLLLSSVNLPGGQQRMKTYEDQLQMRSFFQEHDLISAEVQQVNADGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSL-PNTGVDLILGTNGNVWISRTPPEEWKG-KEEGDASGTGSMAPKAETLTRQRKQHAETETLGDARTNICRVRNAIVALRNVFHLVTPDSIMAVYLKSVSLGLTPKGMLSGEAVLELTSK 1414
            IVVPGQ IT+  G+LRGHGTY++E  DGG P+L+ACVAGVVERVNKLISVRP+K+RYIGEVGDLVVGRV+EV  KRW V++G H+ A+L+LSSVNLPGG QR +TYEDQLQMR+FF+E+DLISAEVQQ+  DG I LHTRSLKYGKLENGQL+ VP VL++RLKQH ++L P  GVD++LGTNG VWI+R  P EW G   EG    T  +  KAETL + R+ HAET  L D R  ICRVRNA+V L++ F L+TPD+I AVY +SV  G+  K ML  EA+  L  +
Sbjct:    4 IVVPGQVITAEGGFLRGHGTYIQESEDGGEPQLIACVAGVVERVNKLISVRPVKSRYIGEVGDLVVGRVTEVGGKRWKVDVGGHQDAILMLSSVNLPGGAQRKRTYEDQLQMRTFFKENDLISAEVQQIQQDGSIVLHTRSLKYGKLENGQLLRVPQVLVKRLKQHFITLAPPIGVDVVLGTNGRVWITRAMPAEWTGGTSEGADMDTNVLTSKAETLMQLRRLHAETPILRDERERICRVRNAVVTLQHAFALITPDAIAAVYARSVEAGMAAKDMLQAEALASLMPQ 292
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BLAST of mRNA_P-littoralis_Contig118.76.3 vs. uniprot
Match: A0A1V9YN11_9STRA (Ribosomal RNA-processing protein 4 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YN11_9STRA)

HSP 1 Score: 283 bits (724), Expect = 1.550e-86
Identity = 151/266 (56.77%), Postives = 193/266 (72.56%), Query Frame = 2 
Query:  542 SDHMIVVPGQEITSVQGYLRGHGTYVEEGTDGGPPRLLACVAGVVERVNKLISVRPIKTRYIGEVGDLVVGRVSEVQSKRWSVEIGAHKSAVLLLSSVNLPGGQQRMKTYEDQLQMRSFFQEHDLISAEVQQVNADGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPNTGVDLILGTNGNVWISRTPPEEWKGKEEGDASGTGSMAPKAETLTRQRKQHAETETLGDARTNICRVRNAIVALRNVFHLVTPDSIMAVY 1339
            + +++V PGQ ITS  G+LRGHGTYVE G       LLA VAGVVE+VN+L+SVRP+ +RYIGEVGD+VVGR+SEV SKRW V+I   + AVL+LSSVNLPGG QR +TYEDQLQMRSFF+E +LISAEVQ+V  DG + LHTRSL+YGKLENGQL++V P L++RLKQH++ LP  G+D+ILG NG +W+SR+         E DA    +   +A+  T ++  HA T T  + R  I +V NAI  L   F  +TP+SIMA+Y
Sbjct:   27 AQYVVVTPGQVITSEPGFLRGHGTYVENG------ELLASVAGVVEKVNQLVSVRPLVSRYIGEVGDIVVGRISEVGSKRWKVDINGQQDAVLMLSSVNLPGGAQRRRTYEDQLQMRSFFEESELISAEVQEVRYDGTMWLHTRSLRYGKLENGQLITVQPSLVKRLKQHMLQLP-IGIDVILGCNGYIWVSRS--------IEHDAESLTTNESRADVWTERKATHAATVTSAEDRKKIAKVTNAIAQLNTRFQTITPESIMALY 277
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BLAST of mRNA_P-littoralis_Contig118.76.3 vs. uniprot
Match: A0A5D6Y3M5_9STRA (Ribosomal RNA-processing protein 4 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3M5_9STRA)

HSP 1 Score: 280 bits (715), Expect = 3.760e-85
Identity = 151/275 (54.91%), Postives = 199/275 (72.36%), Query Frame = 2 
Query:  521 DWKSMSVSDHMIVV-PGQEITSVQG-YLRGHGTYVEEGTDGGPPRLLACVAGVVERVNKLISVRPIKTRYIGEVGDLVVGRVSEVQSKRWSVEIGAHKSAVLLLSSVNLPGGQQRMKTYEDQLQMRSFFQEHDLISAEVQQVNADGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPNTGVDLILGTNGNVWISRTPPEEWKGKEEGDASGTGSMAPKAETLTRQRKQHAETETLGDARTNICRVRNAIVALRNVFHLVTPDSIMAVY 1339
            D  +++ + H++VV PGQ I++  G +LRGHGTY+          L+A VAGVVE+VN+LISVRP+ +RYIGEVGD+VVGRV+EV SKRW V++   + A L+LSSV LPGG QR +TYEDQLQMR+FF E+DLISAE+Q+V  DG +ALHTRSL+YGKLENGQ V V P L++R+KQH+V+LP  GVDLILGTNG +W++R+      G ++      G+M  + E L  +R+QHA T+   D R  I RV  A++ L   F L+TP+SIMAVY
Sbjct:   15 DDDALADAQHVVVVTPGQVISTETGAFLRGHGTYMSNN------ELVASVAGVVEKVNQLISVRPLASRYIGEVGDIVVGRVTEVASKRWKVDVNGQQDASLMLSSVTLPGGAQRRRTYEDQLQMRNFFVENDLISAEIQEVRYDGSLALHTRSLRYGKLENGQFVRVAPSLVKRVKQHMVTLPGIGVDLILGTNGYLWVTRSLAA--LGGDDHALDDAGNMETRVEILMEKRQQHAATKMSVDDRRKIARVHRALLQLNERFRLITPESIMAVY 281
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BLAST of mRNA_P-littoralis_Contig118.76.3 vs. uniprot
Match: K3X3G6_GLOUD (Ribosomal RNA-processing protein 4 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3G6_GLOUD)

HSP 1 Score: 278 bits (712), Expect = 1.930e-84
Identity = 147/265 (55.47%), Postives = 195/265 (73.58%), Query Frame = 2 
Query:  551 MIVVPGQEITSVQG-YLRGHGTYVEEGTDGGPPRLLACVAGVVERVNKLISVRPIKTRYIGEVGDLVVGRVSEVQSKRWSVEIGAHKSAVLLLSSVNLPGGQQRMKTYEDQLQMRSFFQEHDLISAEVQQVNADGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPNTGVDLILGTNGNVWISRTPPEEWKGKEEG-DASGTGSMAPKAETLTRQRKQHAETETLGDARTNICRVRNAIVALRNVFHLVTPDSIMAVY 1339
            ++V PGQ I++  G +LRGHGTY++  T+     L+A V GVVE+VN+LI+VRP+ +RYIGEVGD+VVGR++EV +KRW V++   + A L+LSSV LPGG QR +TYEDQLQMR+FF E+DLISAE+Q+V  DG ++LHTRSL+YGKLENGQ V V P L++R+KQH+V+LP  GVDLILGTNG +W+SR+      G +   D   TG+M  + E L  +R+QHA T+   D R  I RV  A++ L   F L+TP+SIMAVY
Sbjct:   39 VVVTPGQVISTETGAFLRGHGTYLDHQTN----ELIASVTGVVEKVNQLITVRPLVSRYIGEVGDIVVGRITEVANKRWKVDVNGQQDASLMLSSVTLPGGAQRRRTYEDQLQMRNFFVENDLISAEIQEVRYDGSLSLHTRSLRYGKLENGQFVQVAPHLVKRMKQHMVTLPGIGVDLILGTNGYLWLSRSFTALNGGDDSSMDDLSTGNMETRVEILMEKRQQHANTKMSVDDRKKIARVYRALLHLNEQFRLITPESIMAVY 299
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BLAST of mRNA_P-littoralis_Contig118.76.3 vs. uniprot
Match: A0A067C1K3_SAPPC (Ribosomal RNA-processing protein 4 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C1K3_SAPPC)

HSP 1 Score: 275 bits (702), Expect = 1.400e-83
Identity = 148/266 (55.64%), Postives = 189/266 (71.05%), Query Frame = 2 
Query:  542 SDHMIVVPGQEITSVQGYLRGHGTYVEEGTDGGPPRLLACVAGVVERVNKLISVRPIKTRYIGEVGDLVVGRVSEVQSKRWSVEIGAHKSAVLLLSSVNLPGGQQRMKTYEDQLQMRSFFQEHDLISAEVQQVNADGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPNTGVDLILGTNGNVWISRTPPEEWKGKEEGDASGTGSMAPKAETLTRQRKQHAETETLGDARTNICRVRNAIVALRNVFHLVTPDSIMAVY 1339
            + +++V PGQ ITS  G+LRGHGTYVE G       LLA VAGVVE+VN+L+SVRP+ +RYIGEVGD+VVGR+SEV SKRW V+I   + AVL+LSSVNLPGG QR +TYEDQLQMRSFF+E +LISAEVQ+V  DG + LHTRSL+YGKLENGQL++V P L++RLKQH++ LP  G+D+ILG NG +WI+R        + E DA    +   +A+  T ++  HA T T    R  I  V N +  L   F  +TP+SIM +Y
Sbjct:    6 AQYVVVTPGQVITSEPGFLRGHGTYVENG------ELLASVAGVVEKVNQLVSVRPLVSRYIGEVGDIVVGRISEVGSKRWKVDINGQQDAVLMLSSVNLPGGAQRRRTYEDQLQMRSFFEESELISAEVQEVRYDGTMWLHTRSLRYGKLENGQLIAVQPALVKRLKQHMLQLP-IGIDVILGCNGYIWIAR--------RIEHDAESLTTNESRADVWTERKATHAATPTDAADRKKIAAVYNVLSTLNAQFKTITPESIMELY 256
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BLAST of mRNA_P-littoralis_Contig118.76.3 vs. uniprot
Match: A0A485LWE7_9STRA (Ribosomal RNA-processing protein 4 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LWE7_9STRA)

HSP 1 Score: 275 bits (703), Expect = 2.130e-83
Identity = 151/263 (57.41%), Postives = 192/263 (73.00%), Query Frame = 2 
Query:  542 SDHMIVVPGQEITSVQGYLRGHGTYVEEGTDGGPPRLLACVAGVVERVNKLISVRPIKTRYIGEVGDLVVGRVSEVQSKRWSVEIGAHKSAVLLLSSVNLPGGQQRMKTYEDQLQMRSFFQEHDLISAEVQQVNADGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPNTGVDLILGTNGNVWISRTPPEEWKGKEEGDASGTGSMAPKAETLTRQRKQHAETETLGDARTNICRVRNAIVALRNVFHLVTPDSIM 1330
            + +++V PGQ ITS  G+LRGHGTYVE+G       LLA VAG+VE+VN+L+SVRP+ +RYIGEVGD+VVGR+SEV +KRW V+I   + AVL+LSSVNLP G QR +T EDQLQMRSFFQE +LISAEVQ+V  DG + LHTRSL+YGKLENGQL+ V P L++RLKQH+VSLPN GVD+ILG NG +WI R+  E     E  D +    +   A+  T +++ HA T T    R NI RV NA+  L + F L++P+SIM
Sbjct:   27 AQYVVVTPGQVITSEPGFLRGHGTYVEDG------ELLASVAGIVEKVNQLVSVRPLVSRYIGEVGDIVVGRISEVGNKRWKVDINGQQDAVLMLSSVNLPSGAQRRRTTEDQLQMRSFFQEGELISAEVQEVRYDGTMWLHTRSLRYGKLENGQLIQVQPSLVKRLKQHMVSLPNLGVDVILGCNGYLWIMRS-METTTTAETAD-NAVNELT--ADAWTARKQAHATTATDVVDRQNIARVYNALAKLNSDFRLISPESIM 279
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BLAST of mRNA_P-littoralis_Contig118.76.3 vs. uniprot
Match: A0A2D4BZY9_PYTIN (Ribosomal RNA-processing protein 4 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZY9_PYTIN)

HSP 1 Score: 274 bits (701), Expect = 6.000e-83
Identity = 146/267 (54.68%), Postives = 197/267 (73.78%), Query Frame = 2 
Query:  551 MIVVPGQEITSVQG-YLRGHGTYVEEGTDGGPPRLLACVAGVVERVNKLISVRPIKTRYIGEVGDLVVGRVSEVQSKRWSVEIGAHKSAVLLLSSVNLPGGQQRMKTYEDQLQMRSFFQEHDLISAEVQQVNADGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPNTGVDLILGTNGNVWISRTPPEEWKGKEE---GDASGTGSMAPKAETLTRQRKQHAETETLGDARTNICRVRNAIVALRNVFHLVTPDSIMAVY 1339
            ++V PG+ I++  G +LRGHGTY+          L+A VAGVVE+VN+LI+VRP+ +RYIGEVGD+VVGRV+EV +KRW V++   + A L+LSSV LPGG QR +TYEDQLQMRSFF E+DLISAE+Q+V  DG ++LHTRSL+YGKLENGQ V+V P L++R+KQH+V+LP  GVD+ILGTNG +WISR+      G ++    + +G GSM  + E LT +R++HA T+   + R  I RV  A++ L   F ++TPDSI+AVY
Sbjct:   29 VVVTPGEVISTETGAFLRGHGTYLSNN------ELVASVAGVVEKVNQLITVRPLVSRYIGEVGDIVVGRVTEVGNKRWKVDVNGQQDAGLMLSSVTLPGGAQRRRTYEDQLQMRSFFVENDLISAEIQEVRYDGSLSLHTRSLRYGKLENGQFVAVRPSLVKRMKQHMVTLPTLGVDVILGTNGYLWISRS-LSALDGVDDVASTEDTGPGSMETRVEVLTHKRQRHAATKMSHEDREKIARVYRAVLQLNEQFRVITPDSILAVY 288
[Close]
BLAST of mRNA_P-littoralis_Contig118.76.3 vs. uniprot
Match: A0A1V9YVZ5_9STRA (Ribosomal RNA-processing protein 4 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YVZ5_9STRA)

HSP 1 Score: 273 bits (699), Expect = 7.260e-83
Identity = 148/264 (56.06%), Postives = 189/264 (71.59%), Query Frame = 2 
Query:  548 HMIVVPGQEITSVQGYLRGHGTYVEEGTDGGPPRLLACVAGVVERVNKLISVRPIKTRYIGEVGDLVVGRVSEVQSKRWSVEIGAHKSAVLLLSSVNLPGGQQRMKTYEDQLQMRSFFQEHDLISAEVQQVNADGGIALHTRSLKYGKLENGQLVSVPPVLIRRLKQHVVSLPNTGVDLILGTNGNVWISRTPPEEWKGKEEGDASGTGSMAPKAETLTRQRKQHAETETLGDARTNICRVRNAIVALRNVFHLVTPDSIMAVY 1339
            +++V PGQ I+S  G+LRGHGTYVE G       LLA VAGVVE+VN+L+SVRP+ +RYIGEVGD+VVGR+SEV SKRW V+I   + AVL+LSSVNLPGG QR +TYEDQLQMRSFF+E +LISAEVQ+V  DG + LHTRSL+YGKLENGQL+ V P L++RLKQH++ LP  G+D+ILG NG +WISR+         E D+    +   +A+  T ++  HA+T T    R  I +V N I  L   F  +TP+SIM +Y
Sbjct:   29 YVVVTPGQVISSEPGFLRGHGTYVENG------ELLASVAGVVEKVNQLVSVRPLVSRYIGEVGDIVVGRISEVGSKRWKVDINGQQDAVLMLSSVNLPGGAQRRRTYEDQLQMRSFFEECELISAEVQEVRYDGTMWLHTRSLRYGKLENGQLIVVQPALVKRLKQHMLQLP-IGIDVILGCNGYIWISRS--------IEHDSESLTTNESRADVWTERKATHAQTPTSAIDRKTIAKVYNVISTLNANFKTITPESIMEMY 277
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig118.76.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KMR3_9PHAE5.390e-18489.83Ribosomal RNA-processing protein 4 n=1 Tax=Ectocar... [more]
D8LIC3_ECTSI2.330e-14691.98Ribosomal RNA-processing protein 4 n=1 Tax=Ectocar... [more]
A0A836CMW4_9STRA2.930e-11964.36Ribosomal RNA-processing protein 4 n=1 Tax=Tribone... [more]
A0A1V9YN11_9STRA1.550e-8656.77Ribosomal RNA-processing protein 4 n=1 Tax=Achlya ... [more]
A0A5D6Y3M5_9STRA3.760e-8554.91Ribosomal RNA-processing protein 4 n=1 Tax=Pythium... [more]
K3X3G6_GLOUD1.930e-8455.47Ribosomal RNA-processing protein 4 n=1 Tax=Globisp... [more]
A0A067C1K3_SAPPC1.400e-8355.64Ribosomal RNA-processing protein 4 n=2 Tax=Saprole... [more]
A0A485LWE7_9STRA2.130e-8357.41Ribosomal RNA-processing protein 4 n=1 Tax=Aphanom... [more]
A0A2D4BZY9_PYTIN6.000e-8354.68Ribosomal RNA-processing protein 4 n=1 Tax=Pythium... [more]
A0A1V9YVZ5_9STRA7.260e-8356.06Ribosomal RNA-processing protein 4 n=1 Tax=Thraust... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig118contigP-littoralis_Contig118:294759..301644 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LIC3
Preferred nameEXOSC2
PFAMsECR1_N,KH_6
Model size2173
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00078
KEGG koko:K03679,ko:K10572
KEGG ReactionR05202
KEGG Pathwayko00562,ko01100,ko03018,ko04070,map00562,map01100,map03018,map04070
KEGG ModuleM00132,M00390,M00391
Hectar predicted targeting categoryother localisation
GOsGO:0000175,GO:0000176,GO:0000177,GO:0000178,GO:0000184,GO:0000228,GO:0000288,GO:0000291,GO:0000459,GO:0000460,GO:0000466,GO:0000467,GO:0000469,GO:0000785,GO:0000790,GO:0000956,GO:0001558,GO:0002252,GO:0002376,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005652,GO:0005654,GO:0005694,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006401,GO:0006402,GO:0006403,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0008150,GO:0008152,GO:0008298,GO:0008312,GO:0008408,GO:0009056,GO:0009057,GO:0009605,GO:0009607,GO:0009615,GO:0009892,GO:0009893,GO:0009894,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0016070,GO:0016071,GO:0016072,GO:0016073,GO:0016074,GO:0016075,GO:0016078,GO:0016180,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0019219,GO:0019222,GO:0019439,GO:0022613,GO:0030307,GO:0031123,GO:0031125,GO:0031126,GO:0031323,GO:0031329,GO:0031974,GO:0031981,GO:0032991,GO:0033036,GO:0034399,GO:0034427,GO:0034470,GO:0034472,GO:0034475,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0040008,GO:0042254,GO:0043144,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043487,GO:0043488,GO:0043628,GO:0043632,GO:0043633,GO:0043634,GO:0043928,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0045927,GO:0046483,GO:0046700,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051179,GO:0051252,GO:0051607,GO:0051641,GO:0051704,GO:0051707,GO:0060147,GO:0060149,GO:0060255,GO:0060968,GO:0060969,GO:0061013,GO:0065007,GO:0065008,GO:0070013,GO:0070478,GO:0070481,GO:0070651,GO:0070727,GO:0071025,GO:0071027,GO:0071028,GO:0071029,GO:0071031,GO:0071033,GO:0071034,GO:0071035,GO:0071038,GO:0071042,GO:0071043,GO:0071046,GO:0071047,GO:0071049,GO:0071051,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0098542,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902494,GO:1903311,GO:1905354
Exons9
Evalue3.98e-153
EggNOG OGsCOG1097@1|root,KOG3013@2759|Eukaryota
Ec32 ortholog descriptionRrp4 is a component of the exosome 3'->5' exoribonuclease complex, a complex that degrades mRNAs.
Ec32 orthologEc-24_001630.1
EC2.7.1.158
Descriptionnuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription
Cds size888
COG categoryJ
BRITEko00000,ko00001,ko00002,ko01000,ko03019
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig118.76.3prot_P-littoralis_Contig118.76.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig118 295512..301112 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789494.597765-UTR-P-littoralis_Contig118:294758..2955111680789494.597765-UTR-P-littoralis_Contig118:294758..295511Pylaiella littoralis U1_48UTRP-littoralis_Contig118 294759..295511 -
1680789494.7357717-UTR-P-littoralis_Contig118:301112..3016441680789494.7357717-UTR-P-littoralis_Contig118:301112..301644Pylaiella littoralis U1_48UTRP-littoralis_Contig118 301113..301644 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789494.6144116-CDS-P-littoralis_Contig118:295511..2956381680789494.6144116-CDS-P-littoralis_Contig118:295511..295638Pylaiella littoralis U1_48CDSP-littoralis_Contig118 295512..295638 -
1680789494.624192-CDS-P-littoralis_Contig118:296071..2961331680789494.624192-CDS-P-littoralis_Contig118:296071..296133Pylaiella littoralis U1_48CDSP-littoralis_Contig118 296072..296133 -
1680789494.6405377-CDS-P-littoralis_Contig118:296547..2966601680789494.6405377-CDS-P-littoralis_Contig118:296547..296660Pylaiella littoralis U1_48CDSP-littoralis_Contig118 296548..296660 -
1680789494.6549103-CDS-P-littoralis_Contig118:297450..2975771680789494.6549103-CDS-P-littoralis_Contig118:297450..297577Pylaiella littoralis U1_48CDSP-littoralis_Contig118 297451..297577 -
1680789494.6708207-CDS-P-littoralis_Contig118:298244..2983131680789494.6708207-CDS-P-littoralis_Contig118:298244..298313Pylaiella littoralis U1_48CDSP-littoralis_Contig118 298245..298313 -
1680789494.6832335-CDS-P-littoralis_Contig118:298631..2987601680789494.6832335-CDS-P-littoralis_Contig118:298631..298760Pylaiella littoralis U1_48CDSP-littoralis_Contig118 298632..298760 -
1680789494.694362-CDS-P-littoralis_Contig118:299368..2994411680789494.694362-CDS-P-littoralis_Contig118:299368..299441Pylaiella littoralis U1_48CDSP-littoralis_Contig118 299369..299441 -
1680789494.7146266-CDS-P-littoralis_Contig118:300069..3002181680789494.7146266-CDS-P-littoralis_Contig118:300069..300218Pylaiella littoralis U1_48CDSP-littoralis_Contig118 300070..300218 -
1680789494.7256937-CDS-P-littoralis_Contig118:301073..3011121680789494.7256937-CDS-P-littoralis_Contig118:301073..301112Pylaiella littoralis U1_48CDSP-littoralis_Contig118 301074..301112 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig118.76.3

>prot_P-littoralis_Contig118.76.3 ID=prot_P-littoralis_Contig118.76.3|Name=mRNA_P-littoralis_Contig118.76.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=296bp
MSVSDHMIVVPGQEITSVQGYLRGHGTYVEEGTDGGPPRLLACVAGVVER
VNKLISVRPIKTRYIGEVGDLVVGRVSEVQSKRWSVEIGAHKSAVLLLSS
VNLPGGQQRMKTYEDQLQMRSFFQEHDLISAEVQQVNADGGIALHTRSLK
YGKLENGQLVSVPPVLIRRLKQHVVSLPNTGVDLILGTNGNVWISRTPPE
EWKGKEEGDASGTGSMAPKAETLTRQRKQHAETETLGDARTNICRVRNAI
VALRNVFHLVTPDSIMAVYLKSVSLGLTPKGMLSGEAVLELTSKE*
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mRNA from alignment at P-littoralis_Contig118:294759..301644-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig118.76.3 ID=mRNA_P-littoralis_Contig118.76.3|Name=mRNA_P-littoralis_Contig118.76.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=6886bp|location=Sequence derived from alignment at P-littoralis_Contig118:294759..301644- (Pylaiella littoralis U1_48)
GATGGATGCTACCTGCTGCCTCTGCCGGCTTGTGTACCGCGGTGTGCACC
ACATCCCAGGCAGCCGTGGCCTTCCTGATAAATTCAGAAGTATCAAGATT
CAGAGCTTCGTGGAGTGCAGCAGACGGTTTGTGCAGCTACCCGTGTTTGC
GAATTTAAACGGGAAAGGTGCGAGTTCCTCGTGAGGATTTACAGGGTGTG
GCACTTCCGTGCTGATAGGGACAGCAGAAGCAGCGGCAGCAGCAGCGACC
CAGACCGAAGAAGAAGCACCCAGATATCCATCACTGGGGTGTGGCTTGGC
TTGACTTGGCTTGGCTTGGCTCAGCGTGGCGACCATTCGGCGCTCGGTCG
ATCTCGGTTTCGACTGCGCCGGCCAGCTGCTGCTGTCGGCTGATCTGTAG
GGGGGAGTTTTAGTTTTTCAAACTCACGGGACTGTGAAAACGGGAGCATC
CCCAGCGGTGGCACTGGAGAGACGAAGCCGGAGAGAGGGAGGCAGGCAGA
GAGAGAGGGAGAGAGGGAGAGACTGGAAGAGTATGAGTGTCTCCGACCAC
ATGATCGTTGTCCCTGGACAGGTGAGGGACAAACACGAAAGCACGCCTGT
ATGTACGCACACGCACGTATACATGTGTTTTCTGTGATATCTCGAACGTA
TATCGCATTCCCCAAGTATCATACCGACGCGATCTGGTACACATACGAAA
GGCAAAGTGCATTCATATATTTGTACACCACGGTATTCCACTACCTTTTA
CTCACGCCTCTGAAGAACCAAGTCATAATAATACCAGATTTTATGATTTT
GAACAAGCACTTTTGTACACAGTGCCATTGATCCCATCACTTTGTGCGAG
GTACATGGCACTCCGGAGTACAGCAGTACATGCTGTATCATACCAGTATG
ATAGAAGCACCGACAAAATTGCATCGTGGGCTTGGCACCACTTCTATGGA
CCCCTGATCGGATTGGTTTTGCAGATTGTTTCTCGGATTGGATTGATGTC
TACCAGACGAATAGCAGGACAGCAGATGCTGCTCTAATAGTCTTCCATGC
CATGCTGTCTCGGACTGAATGGAGCCAATCGACGAGGGTGCGCACCGCCC
GTCAAACCGATGGTGCTTATCGACCGAGTCATAAGTTTAGTTTCGTCGGG
GGCGGGGGGCGGGGGGCGTGACGTTCGCTTCTTTGCTCTGCGAAAAGCAG
GCACTTTTTTCGTCGGGGCATTGGCCCACACTTACACACCGATCGTGCCT
GCCCTCCACAGCTCTGGAGGTCCATTTCGGGCGTTCGATGGGATTATTTG
CTCAACGACGTCTCGCCTGCGATATTTACCAACGAAGAAGAGTCGCAACC
CATCTCTCGCTCATCCGGCGCAATATCATGTGGCCCATCTCTATCGTCTG
CTGGCCGCGTCTCTATTCCCGCGCAGGAAATAACCTCTGTCCAAGGATAC
CTCCGAGGTCACGGGACGTACGTAGAAGAGGGGACGGATGGCGGCCCTCC
CCGGCTCCTGGCATGCGTGGCAGGCGTCGTGGAGAGGGTGAACAAGCTAA
TTTCGGTCCGACCAATAAAAACCAGGTGAGCTACAGAAGTGGCCGCCTGC
AGGTCCCATGCCGCCCTAGAAGCCATCTGTCACACATGGCGGTACGGCAA
CGCTCACATTCCGCCTATGAGCCGCTTTCCCTGTTGCCATTTGGCGGGAT
CAACCAGAGGCTGCAGCTTTCGGTTCGGAGTTGGATGGAGTCCTTCCTCA
ATTGGGGACCGACCACGACTTGTCTTGACCCTGGAAAACCGTGTTTTCAA
CATTTTTTTTTCGCATTTCGCGTGTCATAACTACGTGATCGTTCCACCTC
GGAGGAAAATCCAAGCAACTACGAAAGTACGAAGCACATGTGTAATGCAG
TGAACAATAAGGCCGAAGAAGGTACGCCTTACATCGTGGTGTGTGTAGTC
TAGCTTCTTTGTGTGTCCTAAACCTTACACCCATGCCAACAACGTGTACA
TCGCATTGAGCCCTACCGAAAAAAGCTTTGTGAAAAAATAAAGCTGCTTT
CATACGTACGAGCATCTTAGCCTCGGCATCTCTCCTCCTTCTCTCTCACT
CACTTTGTCCGTCCGCTATTCAAGTATCACGAAGGTCGTCGTCTGCTTTT
TTTGCTGATTTCGTTTCTTTTGTATTTCTTTGCCTTTTCGTTTTGATTTC
TAGGTACATCGGCGAGGTGGGCGACCTTGTCGTCGGGAGGGTGTCGGAGG
TCCAGTCGAAGCGCTGGAGCGTGGAGGTATCTAAATGTCAACGTTCCCTT
TTTTTTTATTGCAGAGGGGGGTATCACAGGTAGGCCGGCACACAACAAGC
AGGAGAAGCTTTGGTTTGCTATTACATGGGAGGAGACGTGCGTAGGTGGA
TGGCGTGTGTGTGTTTGTGTTAGTCTTGGCGTAATTTTGATTTCCGCTGC
TTTTCCTTTTCGAGATCTCCCCCCGGTGCCGCCGTAAAAAGCTCTGCAAG
GACCCGCCCCCACTCACACACGCTGGTTCCCTCCATCTCTTCCTCCTCCC
GTGACACCCCTTCAACGGAAGTACCCGCCGTCTAGATCAAGACGCATACC
ATACGTACGGAAAGGAACCGTGATGATACTCAGCTCGGCAAGTCTCCTTG
CAAGTACTCCTCCCCTTTCACCCTTTCCTCCATCATTCCCTCCCTCCCTC
CTTCCCTCCCGCCCTTCCTCTCATATATTTCCTCCTCGTTTTGTGCAAAC
ATCGGGGTTCACAAGAGCGCCTGTTGTTGCTCAGCTCGGCGAAACTCTTT
GCAAGCACCTCCTCCCCCTACACCTTTCTCTTTTTTTTTCTCCCTCCCTC
CCTCCCTCCCTCCCCTCCTCGCTCCACGTTTCAGATCGGGGCCCACAAGA
GCGCCGTGTTGTTGCTCAGCTCGGTGAACCTCCCGGGCGGGCAGCAACGG
ATGAAGACGTACGAGGATCAGCTGCAGATGCGCTCGTTCTTCCAGGAGCA
CGATCTGATCAGCGTGAGTTTTTTTTTTTTTGTGTGTTTTCGCGTCGGTG
TCGGGAAGTGGTTTGTTGATTCCGGGGGTACGTCCATCGGAAGTTCTGCT
GTTCTCACCGGCTGGCTCAGGACGGAATATTGCAGAAGTACGTACTCAAA
GGTGAAACGAGTTTTTGGGTGTGAACGCCGCAGCAAGAGCAACAACAGCC
ACAACAACAACCCTAAGGTTGAGAGGATGTGCTGCTACCGCTGCTTCTTG
CGTAAGAATAACCTGTCGCCGTGGCCTCAATTGTGCCGTTCTTTCTTGCC
CGACGTCGGTTTCTATTTTTTTGGTCTACAGGCCGAAGTGCAACAGGTCA
ATGCAGACGGGGGGATCGCTCTACACACCAGAAGCCTCAAGTACGGCAAG
GTACGATTTGTTCCGTGCTTTTGTTGTTCCTCAAAAAAGCTTGTTTTTTA
CAGCTATCATAGCTCGTGGTCACAAAACCTGCACATAAAAGAATCAGATA
TGGAGAAAAGGCTCACTCCAGACTAGAAATATTGTGTGTACTACACACAC
GAGAAAGTACAGCGCCCGCAAGGAGATAAATGTACGTGTGGGCACGCGTG
TGTGCGTACGTGGCAAAATCGAGGACAGTTTGCCGCTGTCTGCTGGGAGC
CGAGGCTTACGTTCTTCTTTTTTCTCGCTTTGATATTTGTGAGAGGAGAC
CGGGTTGGTTCCGGCCGGCAGCAATGCCGTCAGTTTCATTTTGTCGGTTT
TTATCGCAAAGAGTCTTTTTACACAGCACTTGTGAAATAGTTTTTGAAGA
ATGCGGCTGACCCCCCGCGACTCGCGTTCTTTGTCCTTGTCGCTGGTAAT
GGTTGTCTCCACGCCGCACCCTGCCCCCCCCCACCCGCACTCCGAAAACG
CCCATGTTCAATGTCCGAAAAGTTGGTGAAGAGGGGGCAACCGGTCCCGC
CGGTCTGATGCAAACGCTGAATGAAGAAGAACAAATTATGCCTTACTGTT
GTAGCGCTTTCCACTCGTCTACCTCCCCCCTCCAAATAAAAAAACACGCG
TTTTCTTCGAAATCCAGCTTGAGAACGGGCAGCTTGTTTCTGTGCCGCCG
GTACTGATCCGACGGCTGAAGCAGCACGTGGTGTCCCTGCCGAACACGGG
CGTCGACCTTATCCTGGGGACCAACGGGAACGTTTGGATTTCGAGTGAGC
TGTCGAGTTTTTGTTTGGCGTGGTGTTTCAGGTGTTCGTGTGTGTGAATG
GTGTATGCCCGCGTTCGGGTGTGCGTGTGCGCGAGCGTGCGGGTGTGCGT
TACTACTTAAATCAAGCGAAACATCACAAACATACATGCAAACATACATA
CATACATACATACATACATACATACTCCGGAGTACATACTTCGAAGTACA
TACATTAATACATTTCGTATATACATACAGACGTTCATACCTTTGTTTAT
TTGGAATGCCGCGCGTGCAATTATCAGATCATACCGTAAATGCAGCGTGC
ACAATGGTCGTGCGATGGATAGGAGGGCGGAGAATATGATAGGCGAAAGG
TGCAAAACAACTGCAGTATGTGGTGGTACGGGAAGTTGGCTCGCGCTGTT
GGACATGCACATCAATGGTTCTCATGTGGGTGAAGCGCATGATTTACTTT
CAAGTACAGCAATACTGTAATTTTTTTTGTGATCACGGTGAAAAAACCGG
AACGTTTCCCGTGGAGAGTAAGGATGGACAAGGAAGGGGACGCGTAGGGG
TGAGGATGGGGTATGAGTCGGAAGGAAAGGAATGCAGGGAAACGATGGCT
ACTTGTTTCATGCTTCGAGTCGGGTGAACATGTCAGGGCGTTCGTTCCCG
CGTGTGAAAAGAGCTGGGGGTACGATATATGGTACGGCCGTTTCGCTCTC
ACGTGTTGTCTGTCGCCTATCATATGTACATTAAATGCTATTTTGACAAG
CTGTGTGTGTGTGTTTTATTGTGAACAACAACAGGAACGCCTCCCGAGGA
GTGGAAGGGAAAGGAGGAGGGAGACGCGTCGGGCACGGGGAGCATGGCGC
CGAAGGCCGAAACGCTCACGCGCCAGAGAAAACAGCACGCCGAAACGGTG
AGTTAGCGATGTGATGGACGTTGTTTGGATGGCCTGGTCTGGCTGGCTGT
GCACACACGCACACACACCTATAAAGGCACACAGACACACACACATGTGA
GTGTGGTTGGTTGTTTAGGAGAGACGCTTCGAGTTTTGTTATGTACACGC
ACGCACACAAACCCGCTTGCAAGGGTGGTTCGAGGTTTGTCCAAAGCGCC
ACCTATTTGCTCGCAGACGTCTCTTTCTTTCTTTTCAAGCCTCAAACATG
TTGTACCGCGTGTCAAGTCATCCTCCGACTCCAGTAGCAATACAAACTCA
AGAGGAAATCATTCATGAGGTGGACCACCCGGCGTGTTCCTCGTGCTGCC
TGCTTGGCACGGCGTCGACCACCTGAAACGAATATGGCTGTTCCTTTTTT
CACTGCGGCAGGAGACGCTGGGGGACGCTAGGACAAATATATGCCGAGTC
AGAAACGCCATCGTAGCACTGAGGTACGAGCAGCGTTTGGCGTCGCCGGA
CGCCCTTTAATGTTATTTTTTCATGCGAGGTTTTCCATCCTTTTCGCGAT
CGAAACCCCTCGTCGACATCGACCCCCCCCCCCCCCCCCCCCCGGCCGCC
CGACACAAAGTTTGCCAGGCATGATGAAAATTCTCTTCCCTCAACATCGA
ACTAATTTCCCCGATTTTTCATATCGTCCCCTGCCGTAGTTGACCAAACC
CCTCGGTGTGCTCTTCTGCTGTTTCGAATCTCCTTCCTTCCTCCTGGGCT
GGCATCGAAAGACTGATCAAACGATTCCCTGTAAAACATTTTGTTGATAG
ATTTTAATTTTGAGATCCCCTCCCAAACGTTTGATACCTCCCTCCGTGTC
AAAAAAAACTTGATTTGTTTTCTCCCTTTTTTTTTGTTTCTCTATGTCCG
GTGCAGAAATGTGTTCCATCTCGTGACGCCGGACTCTATCATGGCGGTCT
ACCTCAAGAGCGTATCCCTGGGTCTCACGCCGAAAGGCATGCTGTCTGGC
GAGGCCGTGCTAGAGCTCACCTCGAAGGAATAGTCGGCGTGATGATGATG
ATGATGATAACGATGGCGGTGGTGGCGGTGGTGGTGGCGTACCATGCGTA
GGTTTTGTCGTTTGTCGGTCGTACCTCGTACACGAAGAGGATTAAACAGC
AGCACAAGAAGCTGAAGCTGACATCGTTGCCGACAAATATGAAAGTGTCC
ATCATTCAGCCCCAGGGACGACGGCCAAGCCCAGTTTGAAGGCGATGAAT
AATCTTTGCCGCGTCTGAGAGAGCGAGGTTCAGGCAATGCTGAAATTTCT
CATGATGGGGCCGGTTCCACTGCTGTCTGTGCGGTGGTGCCAGCGTGTGG
TTCTCTCCATGGCCCGTGCGTGTCTTAATCCGCGTGCTTACTCGCAACGG
CTGATTAGTCCCCGCCGGGAGGGAGGCTGAAGGAGCCGGGAAGCTCGCGC
TCACGGGAGCGAAATGGCACCTCGGAGAATACCCTCCTCCCCGTAGGCAA
AATGTAGTCCTACTGAGGCAGTGAAACAGATAGCCCTCTAAAATTGGCGG
TATGGTCTCGAAAACGGCACCCTTATGTACGATTACACGATGAAACAGAT
AACCCCCACACGAAAATTGGCGGCAGGAACTAAAAACCGGCACGCGTGTA
TTCTTTTTTGCAGCACTTCCGAAGTGTAGCACTTCTGCTGCTGTAGAGTA
CAATGTCGTCCAGCAGAGCATTCCGTGAAGAGCGTGTGCGTCTGGTGTTT
GTGTGGAGCCTTCTTTGTTGCTGAGATACGTCTAAA
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Coding sequence (CDS) from alignment at P-littoralis_Contig118:294759..301644-

>mRNA_P-littoralis_Contig118.76.3 ID=mRNA_P-littoralis_Contig118.76.3|Name=mRNA_P-littoralis_Contig118.76.3|organism=Pylaiella littoralis U1_48|type=CDS|length=888bp|location=Sequence derived from alignment at P-littoralis_Contig118:294759..301644- (Pylaiella littoralis U1_48)
ATGAGTGTCTCCGACCACATGATCGTTGTCCCTGGACAGGAAATAACCTC
TGTCCAAGGATACCTCCGAGGTCACGGGACGTACGTAGAAGAGGGGACGG
ATGGCGGCCCTCCCCGGCTCCTGGCATGCGTGGCAGGCGTCGTGGAGAGG
GTGAACAAGCTAATTTCGGTCCGACCAATAAAAACCAGGTACATCGGCGA
GGTGGGCGACCTTGTCGTCGGGAGGGTGTCGGAGGTCCAGTCGAAGCGCT
GGAGCGTGGAGATCGGGGCCCACAAGAGCGCCGTGTTGTTGCTCAGCTCG
GTGAACCTCCCGGGCGGGCAGCAACGGATGAAGACGTACGAGGATCAGCT
GCAGATGCGCTCGTTCTTCCAGGAGCACGATCTGATCAGCGCCGAAGTGC
AACAGGTCAATGCAGACGGGGGGATCGCTCTACACACCAGAAGCCTCAAG
TACGGCAAGCTTGAGAACGGGCAGCTTGTTTCTGTGCCGCCGGTACTGAT
CCGACGGCTGAAGCAGCACGTGGTGTCCCTGCCGAACACGGGCGTCGACC
TTATCCTGGGGACCAACGGGAACGTTTGGATTTCGAGAACGCCTCCCGAG
GAGTGGAAGGGAAAGGAGGAGGGAGACGCGTCGGGCACGGGGAGCATGGC
GCCGAAGGCCGAAACGCTCACGCGCCAGAGAAAACAGCACGCCGAAACGG
AGACGCTGGGGGACGCTAGGACAAATATATGCCGAGTCAGAAACGCCATC
GTAGCACTGAGAAATGTGTTCCATCTCGTGACGCCGGACTCTATCATGGC
GGTCTACCTCAAGAGCGTATCCCTGGGTCTCACGCCGAAAGGCATGCTGT
CTGGCGAGGCCGTGCTAGAGCTCACCTCGAAGGAATAG
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