mRNA_P-littoralis_Contig71.124.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig71.124.2 vs. uniprot
Match: A0A6H5JUK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK3_9PHAE) HSP 1 Score: 402 bits (1032), Expect = 1.010e-138 Identity = 192/228 (84.21%), Postives = 206/228 (90.35%), Query Frame = 1
Query: 1 CKQSGCLLELYKKHESARSRERVARKASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASLLSFRDDFLKANSGKRPDWVVTSPPFKGAVGFVKAALAVATKGAALRLPLSFLEPCADRGGWLAETPPAMCVFLRRAKYTHAHHVKVGEFWGVWYIDGGSCDNSRGSRLVFCPE 684
CK++GCLLELY+K E ARSRERVARKA Q PRHSR WSAAPEPVTHDKRRRLDRYCT PEAV+ L++AVAI+GCVLDMCGGPEDAVAQ F TCEVLTNDVSSRLS TNLDASLLSFRD+F KAN GK+PDWVVTSPP+KGAVGFVKAALAVATKG AL+LPLSFLEPCADRGGWL + PPA+C+FLRRAKYTHAHHVKVGEFWGVWY DGG C S GSRLVFCPE
Sbjct: 75 CKRAGCLLELYQKQEWARSRERVARKAKQMPRHSRMWSAAPEPVTHDKRRRLDRYCTLPEAVEVLQNAVAIAGCVLDMCGGPEDAVAQGFRSTCEVLTNDVSSRLSAGTNLDASLLSFRDNFRKANPGKQPDWVVTSPPYKGAVGFVKAALAVATKGVALKLPLSFLEPCADRGGWLVDNPPAVCIFLRRAKYTHAHHVKVGEFWGVWYTDGGCCGKSGGSRLVFCPE 302
BLAST of mRNA_P-littoralis_Contig71.124.2 vs. uniprot
Match: D7G0Y0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y0_ECTSI) HSP 1 Score: 268 bits (684), Expect = 2.380e-87 Identity = 130/202 (64.36%), Postives = 153/202 (75.74%), Query Frame = 1
Query: 79 ASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASLLSFRDDFLKANSGKRPDWVVTSPPFKGAVGFVKAALAVATKGAALRLPLSFLEPCADRGGWLAETPPAMCVFLRRAKYTHAHHVKVGEFWGVWYIDGGSCDNSRGSRLVFCPE 684
A++TPRH++ APEP TH +RR LDRYCTSPEA+DA AV I+GCVLDMCGGP DAVA R TCE+LTNDVSS DTNLDASL SF +DFL A SGKRP+WV TSPP+ A+ FVKAA+++ATKG ++ + FLEPCAD GGWL PP++CVFLRRAKYT A++ K EFWGVWY SC N +RLVFCPE
Sbjct: 2 AARTPRHAKGQRTAPEPQTHLRRRWLDRYCTSPEAMDASLGAVDITGCVLDMCGGPTDAVATRLRSTCEILTNDVSSGRPADTNLDASLESFPEDFLAAYSGKRPEWVATSPPYSRALTFVKAAMSLATKGVTFKMHIFFLEPCADWGGWLQTNPPSLCVFLRRAKYTRANNAKTSEFWGVWYTQEMSCRNR--TRLVFCPE 201
BLAST of mRNA_P-littoralis_Contig71.124.2 vs. uniprot
Match: A0A6H5K049_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K049_9PHAE) HSP 1 Score: 268 bits (685), Expect = 4.170e-87 Identity = 132/212 (62.26%), Postives = 159/212 (75.00%), Query Frame = 1
Query: 1 CKQSGCLLELYKKHESARSRERVARKASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASLLSFRDDFLKANSGKRPDWVVTSPPFKGAVGFVKAALAVATKGAALRLPLSFLEPCADRGGWLAETPPAMCVFLRRAKYTHAHHVKVGEFWGVWYIDG 636
CK++GCLLEL+ ++ SR R+A + P +W+ APEPV KRR +DRYCTSP ++AL V+ISGCVLDMCGG +DAVA R TC+VLTNDV RLSP TNLDAS SF DDFL A+ G++PDW+VTSPP+KGA+ FVKAAL VA KG AL+LPLSFLEPCADR GWL PPA+C+ + RA+Y AH V+VGEFWGVWY G
Sbjct: 21 CKRAGCLLELFVLNQQRDSRAPTKRRAKRGP----KWTCAPEPVKQLKRRCVDRYCTSPATLEALLGVVSISGCVLDMCGGTDDAVAIRLRDTCQVLTNDVGPRLSPATNLDASSASFTDDFLAAHHGQQPDWIVTSPPYKGALAFVKAALTVAKKGVALKLPLSFLEPCADRAGWLQANPPALCMMMSRARYQPAH-VRVGEFWGVWYPPG 227
BLAST of mRNA_P-littoralis_Contig71.124.2 vs. uniprot
Match: D7FJU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJU4_ECTSI) HSP 1 Score: 243 bits (619), Expect = 3.340e-77 Identity = 119/193 (61.66%), Postives = 144/193 (74.61%), Query Frame = 1
Query: 1 CKQSGCLLELYKKHESARSRERVARKASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLSP-----DTNLDASLLSFRDDFLKANSGKRPDWVVTSPPFKGAVGFVKAALAVATKGAALRLPLSFLEPCADRGGWLAETPPAMCVFL 564
C + CLL+LY K +++ R +A Q RH +W+ PEP H KRR LDRYCTSPEAV+AL AV + GCVLDMCGGP DA+A R G TC+V+TND+S+RLSP DTNLDASL SF DFL A G+RPDWV+TSPP+KGA+ +VK+AL++A KG AL+LPLSFLEPCADRGGWL PPA+CVF
Sbjct: 29 CNRPDCLLQLYIKQLREKNKPRTKLRAQQLARHGAKWTGIPEPRKHIKRRCLDRYCTSPEAVEALLGAVELEGCVLDMCGGPGDAIATRLGATCKVVTNDISTRLSPGGLPPDTNLDASLASFAVDFLLAKPGQRPDWVLTSPPYKGALEYVKSALSLAAKGVALKLPLSFLEPCADRGGWLQANPPAVCVFF 221
BLAST of mRNA_P-littoralis_Contig71.124.2 vs. uniprot
Match: A0A6H5KZK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZK3_9PHAE) HSP 1 Score: 238 bits (608), Expect = 1.310e-76 Identity = 120/139 (86.33%), Postives = 124/139 (89.21%), Query Frame = 1
Query: 1 CKQSGCLLELYKKHESARSRERVARKASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASLLSFRDDFLKANSGKRPDWVVTSPP 417
CK+SG LLELYKKHE ARSRERVA KA QTPRHSR WSAAPEPVTHDKRRRLDRYCTSP AVDALRDAV I GCVLDMCGGPE AVA FGGTCEVLTNDV SRLSPD+NLDASLLSF DFLKA+ GK+PDWVVTSPP
Sbjct: 9 CKRSGYLLELYKKHERARSRERVAWKAEQTPRHSRTWSAAPEPVTHDKRRRLDRYCTSPGAVDALRDAVDIMGCVLDMCGGPEAAVALGFGGTCEVLTNDVGSRLSPDSNLDASLLSFPSDFLKAHPGKQPDWVVTSPP 147
BLAST of mRNA_P-littoralis_Contig71.124.2 vs. uniprot
Match: A0A6H5KHQ4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ4_9PHAE) HSP 1 Score: 243 bits (620), Expect = 2.630e-76 Identity = 128/231 (55.41%), Postives = 156/231 (67.53%), Query Frame = 1
Query: 1 CKQSGCLLELYKKHESARSRERVARKASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLS------PDTNLDASLLSFRDDFLKANSGKRPDWVVTSPPFKGAVGFVKAALAVATKGAALRLPLSFLEPCADRGGWLAETPPAMCVFLRRAKYTHAHHVKVGEFWGVWYIDGGSCDNSRGSRLVF 675
CK++ C+L+ KH S +R +K + + W++APEP H KRR LDRYCTS AV+AL DAV +SG VLDMCGGP+DAVA++ TCEV+TNDVSSRLS PDT+LDAS +F +FL ++P+ VV SPP+KGAV FVKAAL VA G AL+ LSFLEPC DR WL PP +CVFLRRA YT HV +GEFWGVWY GG G++LVF
Sbjct: 65 CKRAECVLKQNDKHMSDFCHDRARKKQKRNRSEAATWTSAPEPAVHVKRRHLDRYCTSIVAVEALLDAVNVSGRVLDMCGGPDDAVARKLRDTCEVVTNDVSSRLSSDARRAPDTSLDASKSTFAAEFLADGFQQQPERVVASPPYKGAVKFVKAALCVAKHGVALKRSLSFLEPCVDRADWLEANPPTVCVFLRRASYT-PEHVMMGEFWGVWYCTGGDRTAVGGTKLVF 294
BLAST of mRNA_P-littoralis_Contig71.124.2 vs. uniprot
Match: A0A6H5K929_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K929_9PHAE) HSP 1 Score: 230 bits (587), Expect = 1.270e-73 Identity = 112/151 (74.17%), Postives = 117/151 (77.48%), Query Frame = 1
Query: 232 MCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASLLSFRDDFLKANSGKRPDWVVTSPPFKGAVGFVKAALAVATKGAALRLPLSFLEPCADRGGWLAETPPAMCVFLRRAKYTHAHHVKVGEFWGVWYIDGGSCDNSRGSRLVFCPE 684
MCGGPEDAVA FGGTCEVLTNDVSSRLSP A+ GK+PDWVVTSPP+KGAVGFVKA LAVA KG ALRLPLSF +PCADRG WL + PP MC FLRRAKYTHAHHVKVGEFWGVWY DGG C S GSRLVFCPE
Sbjct: 1 MCGGPEDAVALGFGGTCEVLTNDVSSRLSP-----------------AHPGKQPDWVVTSPPYKGAVGFVKAVLAVAAKGVALRLPLSFRKPCADRGSWLVDNPPVMCGFLRRAKYTHAHHVKVGEFWGVWYTDGG-CGKSGGSRLVFCPE 133
BLAST of mRNA_P-littoralis_Contig71.124.2 vs. uniprot
Match: D8LSI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSI1_ECTSI) HSP 1 Score: 212 bits (539), Expect = 4.060e-66 Identity = 100/151 (66.23%), Postives = 117/151 (77.48%), Query Frame = 1
Query: 232 MCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASLLSFRDDFLKANSGKRPDWVVTSPPFKGAVGFVKAALAVATKGAALRLPLSFLEPCADRGGWLAETPPAMCVFLRRAKYTHAHHVKVGEFWGVWYIDGGSCDNSRGSRLVFCPE 684
MCGGP DAVA R TCE+LTNDVSS DTNL+ASL F +DFL A SGKRP+WVVTSPP+ A+ FVKAA+++ATKG A ++P+ FLEPCADRGGWL PP++CVFLRRAKYT A++ K GEFWGVWY SC N +RLVFCPE
Sbjct: 1 MCGGPTDAVATRLRSTCEILTNDVSSGRPADTNLNASLELFPEDFLAAYSGKRPEWVVTSPPYSRALTFVKAAMSLATKGVAFKMPIFFLEPCADRGGWLQTNPPSVCVFLRRAKYTRANNAKTGEFWGVWYPQEMSCRNR--TRLVFCPE 149
BLAST of mRNA_P-littoralis_Contig71.124.2 vs. uniprot
Match: A0A6H5KD58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD58_9PHAE) HSP 1 Score: 214 bits (544), Expect = 9.280e-66 Identity = 111/167 (66.47%), Postives = 130/167 (77.84%), Query Frame = 1
Query: 1 CKQSGCLLELYKKHESA----RSRERVARKASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASLLSFRDDFLKANSGKRPDWVVTSPPFKGAVGFVKAALAVATKGAALRLP 489
CK+SGCLL+LYKKHE RS++R ARKA+QTPRH+ PEP TH KRR LDRYCTSPEAV+AL AV+I+GC+LD+CGGP DAVA R G TCEVLTNDVSS DTNLDASL SF DDF A+SGKRPDWVVTSP +K A+ FVKAA+++AT+G + P
Sbjct: 38 CKRSGCLLQLYKKHEQRMSKERSKDRRARKAAQTPRHATGMWTVPEPQTHLKRRWLDRYCTSPEAVEALLGAVSITGCILDVCGGPTDAVATRLGPTCEVLTNDVSSGRPADTNLDASLESFPDDFFAASSGKRPDWVVTSPSYKSALTFVKAAMSLATRGVTVPAP 204
BLAST of mRNA_P-littoralis_Contig71.124.2 vs. uniprot
Match: A0A6H5L1N5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1N5_9PHAE) HSP 1 Score: 200 bits (508), Expect = 5.650e-61 Identity = 108/185 (58.38%), Postives = 119/185 (64.32%), Query Frame = 1
Query: 130 VTHDKRRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASLLSFRDDFLKANSGKRPDWVVTSPPFKGAVGFVKAALAVATKGAALRLPLSFLEPCADRGGWLAETPPAMCVFLRRAKYTHAHHVKVGEFWGVWYIDGGSCDNSRGSRLVFCPE 684
++ RRRLDRYCTSP AVDALR AVAI+GCVLDMCGGPEDAVAQ FGGTC TNLDASL+ F D+F+K N GK+PDWVVTSPP+KG+VGFV AALAVATKG AL+L L P P +VGEFWGVWY DG C NS SRLVFCPE
Sbjct: 37 LSRTTRRRLDRYCTSPAAVDALRAAVAITGCVLDMCGGPEDAVAQGFGGTC--------------TNLDASLVYFPDEFIKDNPGKKPDWVVTSPPYKGSVGFVHAALAVATKGVALKLSLYSWNP----------VPTG----------------EVGEFWGVWYTDGSYCGNSGVSRLVFCPE 181 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig71.124.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig71.124.2 >prot_P-littoralis_Contig71.124.2 ID=prot_P-littoralis_Contig71.124.2|Name=mRNA_P-littoralis_Contig71.124.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=152bp MCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASLLSFRDDFLKANSback to top mRNA from alignment at P-littoralis_Contig71:472367..473352- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig71.124.2 ID=mRNA_P-littoralis_Contig71.124.2|Name=mRNA_P-littoralis_Contig71.124.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=986bp|location=Sequence derived from alignment at P-littoralis_Contig71:472367..473352- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig71:472367..473352- >mRNA_P-littoralis_Contig71.124.2 ID=mRNA_P-littoralis_Contig71.124.2|Name=mRNA_P-littoralis_Contig71.124.2|organism=Pylaiella littoralis U1_48|type=CDS|length=456bp|location=Sequence derived from alignment at P-littoralis_Contig71:472367..473352- (Pylaiella littoralis U1_48)back to top |