prot_P-littoralis_Contig71.92.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig71.92.1
Unique Nameprot_P-littoralis_Contig71.92.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length473
Homology
BLAST of mRNA_P-littoralis_Contig71.92.1 vs. uniprot
Match: D8LH71_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH71_ECTSI)

HSP 1 Score: 611 bits (1575), Expect = 2.000e-215
Identity = 343/477 (71.91%), Postives = 382/477 (80.08%), Query Frame = 0
Query:    1 MLGELGDGESAVEGVPQELAQDLIHLMAHQKMIVETRHILSRCHSEDAIVVVGSDVKLRLDILAIDEELENALRNHDPDDPSKYFERLLERLDILRKSLAKANNSIITEKWPEMRAALVRQAALSCFLAQQRDYAGPDPYDWSSVCTKTYINVADRLIPQVDVDLDALDDEEQMSASKERRNLIDVFMEKRRGVSSLKLRTLLKENKLSTFEKDMKAFTRALDQALLPKPKLLELYGSSRLLDGSVDMDVLRVADVGRAGLQGSPSKSSMGSPGRRSTKR----KAETPTPAVGEAPPIAQALAKANESLQRELK-RGPGTVADALAIGESIPPPRSPAAKRAAVETTSGRPTSKRSAQTTARSSERSLTRRESRGEQVDFDDSQSVDEPQDARPTLRHRSTPEKAAALRPPARTVNPKKCK-PRARHPWTEEEVKHLNAAVMALGKGNWTLALAQYKFQDCRTAVDLKDKWRNLMK 471
            M+GELGDGESA +G+PQ+LA DLIHLMAHQKM+VET+HILSRCHS+DAIVVVGSDVKLRLDILAIDEELENAL NHD  DPSK FERLLER DIL KSLA  +++IITE+WP+MRAALVRQAALSCFLAQQR++A P+P+DW SVCTK YI V DRLIPQVD DLDALDDEEQMSASKERRNL DVF EK   VSS+KLRTLLKENK+ TFEKDMKAFTRALDQALLP+PKLL +Y +    DGS DM+V+ + D  + GLQGS SK  M S            KA +P PA  E PP AQALAKANE LQ+EL    PGTV++ALAI E +PPP SPAAKRAAVE  SG P  KR  +  +R S +S+TRRESRGEQVDFDDSQSVDEPQ+AR  L  R +P KAAAL   +  V  KK   PR RHPWTEEEVKHL AAVMALG+G W+LALAQYKFQDCRTAVDLKDKWRNL K
Sbjct:    1 MVGELGDGESATDGIPQQLAHDLIHLMAHQKMVVETQHILSRCHSDDAIVVVGSDVKLRLDILAIDEELENALLNHDQKDPSKPFERLLERFDILHKSLANTDSAIITERWPQMRAALVRQAALSCFLAQQRNHARPEPFDWGSVCTKAYIKVVDRLIPQVDFDLDALDDEEQMSASKERRNLTDVFKEKHCSVSSIKLRTLLKENKVGTFEKDMKAFTRALDQALLPRPKLLTMYSN----DGS-DMNVVDMTDGRQVGLQGSTSKPPMRSXXXXXXXXXXXXKAVSPMPATEETPPTAQALAKANEGLQQELNDHRPGTVSEALAISERLPPPSSPAAKRAAVEDNSGGPADKRPGRAPSRRSGKSVTRRESRGEQVDFDDSQSVDEPQEARAALGDRPSPAKAAALPSASGKVKAKKRSGPRTRHPWTEEEVKHLKAAVMALGRGKWSLALAQYKFQDCRTAVDLKDKWRNLTK 472          
BLAST of mRNA_P-littoralis_Contig71.92.1 vs. uniprot
Match: A0A3L6ES65_MAIZE (Single myb histone 6 n=1 Tax=Zea mays TaxID=4577 RepID=A0A3L6ES65_MAIZE)

HSP 1 Score: 56.6 bits (135), Expect = 1.280e-5
Identity = 25/49 (51.02%), Postives = 31/49 (63.27%), Query Frame = 0
Query:  424 WTEEEVKHLNAAVMALGKGNWTLALAQYKFQDCRTAVDLKDKWRNLMKG 472
            WT +EV+ L   V   G G WTL   ++     RTAV+LKDKWRNL+KG
Sbjct:  117 WTSKEVERLARGVSRFGVGQWTLLKQEFFKSSIRTAVNLKDKWRNLLKG 165          
BLAST of mRNA_P-littoralis_Contig71.92.1 vs. uniprot
Match: C0P3U2_MAIZE (MYB-related transcription factor n=1 Tax=Zea mays TaxID=4577 RepID=C0P3U2_MAIZE)

HSP 1 Score: 56.6 bits (135), Expect = 1.350e-5
Identity = 25/49 (51.02%), Postives = 31/49 (63.27%), Query Frame = 0
Query:  424 WTEEEVKHLNAAVMALGKGNWTLALAQYKFQDCRTAVDLKDKWRNLMKG 472
            WT +EV+ L   V   G G WTL   ++     RTAV+LKDKWRNL+KG
Sbjct:  121 WTSKEVERLARGVSRFGVGQWTLLKQEFFKSSIRTAVNLKDKWRNLLKG 169          
BLAST of mRNA_P-littoralis_Contig71.92.1 vs. uniprot
Match: A0A804PB24_MAIZE (Uncharacterized protein n=2 Tax=Zea mays TaxID=4577 RepID=A0A804PB24_MAIZE)

HSP 1 Score: 56.6 bits (135), Expect = 1.620e-5
Identity = 25/49 (51.02%), Postives = 31/49 (63.27%), Query Frame = 0
Query:  424 WTEEEVKHLNAAVMALGKGNWTLALAQYKFQDCRTAVDLKDKWRNLMKG 472
            WT +EV+ L   V   G G WTL   ++     RTAV+LKDKWRNL+KG
Sbjct:  121 WTSKEVERLARGVSRFGVGQWTLLKQEFFKSSIRTAVNLKDKWRNLLKG 169          
BLAST of mRNA_P-littoralis_Contig71.92.1 vs. uniprot
Match: A0A103XNP9_CYNCS (Homeodomain-like protein n=2 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A103XNP9_CYNCS)

HSP 1 Score: 57.8 bits (138), Expect = 2.810e-5
Identity = 44/113 (38.94%), Postives = 60/113 (53.10%), Query Frame = 0
Query:  363 SLTRRESRGEQVDFDDSQSVDEP-QDARPTLRHRSTPEKAAALRPPARTVNPKK-CKPRARHPWTEEEVKHLNAAVMALGKGNWTLALAQYK--FQDCRTAVDLKDKWRNLMK 471
            SL  R S    +++ D  S+D   +D  P   H  +P+K A    P R    +K  + R +  WT  E   L   ++  GKGNW L L+ Y+  F+D RT VDLKDKWRNLM+
Sbjct:  386 SLMERNSTAHTLEWSD--SIDSSSKDGSPARPHLPSPKKRAVS--PLRIYKMEKLARKRKKKRWTTIEEDTLRTGILKYGKGNWKLILSTYRDIFED-RTEVDLKDKWRNLMR 493          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig71.92.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LH71_ECTSI2.000e-21571.91Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A3L6ES65_MAIZE1.280e-551.02Single myb histone 6 n=1 Tax=Zea mays TaxID=4577 R... [more]
C0P3U2_MAIZE1.350e-551.02MYB-related transcription factor n=1 Tax=Zea mays ... [more]
A0A804PB24_MAIZE1.620e-551.02Uncharacterized protein n=2 Tax=Zea mays TaxID=457... [more]
A0A103XNP9_CYNCS2.810e-538.94Homeodomain-like protein n=2 Tax=Cynara cardunculu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 85..105
NoneNo IPR availableGENE3D1.10.246.220coord: 410..472
e-value: 6.2E-14
score: 53.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 342..360
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 361..400
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..420
NoneNo IPR availablePANTHERPTHR46993MYB TRANSCRIPTION FACTORcoord: 178..471
NoneNo IPR availableCDDcd11660SANT_TRFcoord: 422..471
e-value: 6.52715E-16
score: 69.5183
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 422..469
e-value: 1.3E-5
score: 25.3
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 421..472
score: 11.433112
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 421..470
score: 7.328832
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 419..471

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig71contigP-littoralis_Contig71:350184..379191 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig71.92.1mRNA_P-littoralis_Contig71.92.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig71 350184..380542 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig71.92.1 ID=prot_P-littoralis_Contig71.92.1|Name=mRNA_P-littoralis_Contig71.92.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=473bp
MLGELGDGESAVEGVPQELAQDLIHLMAHQKMIVETRHILSRCHSEDAIV
VVGSDVKLRLDILAIDEELENALRNHDPDDPSKYFERLLERLDILRKSLA
KANNSIITEKWPEMRAALVRQAALSCFLAQQRDYAGPDPYDWSSVCTKTY
INVADRLIPQVDVDLDALDDEEQMSASKERRNLIDVFMEKRRGVSSLKLR
TLLKENKLSTFEKDMKAFTRALDQALLPKPKLLELYGSSRLLDGSVDMDV
LRVADVGRAGLQGSPSKSSMGSPGRRSTKRKAETPTPAVGEAPPIAQALA
KANESLQRELKRGPGTVADALAIGESIPPPRSPAAKRAAVETTSGRPTSK
RSAQTTARSSERSLTRRESRGEQVDFDDSQSVDEPQDARPTLRHRSTPEK
AAALRPPARTVNPKKCKPRARHPWTEEEVKHLNAAVMALGKGNWTLALAQ
YKFQDCRTAVDLKDKWRNLMKG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017930Myb_dom
IPR001005SANT/Myb
IPR009057Homeobox-like_sf