prot_P-littoralis_Contig118.42.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig118.42.1
Unique Nameprot_P-littoralis_Contig118.42.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length274
Homology
BLAST of mRNA_P-littoralis_Contig118.42.1 vs. uniprot
Match: A0A6H5K5I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5I6_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 1.400e-53
Identity = 95/157 (60.51%), Postives = 111/157 (70.70%), Query Frame = 0
Query:   64 GGEHAWKKHFITRESWFDLRLCILGFVSTCRFLFDRPAIFQVDSLSPNDRRFIGPRNLSQDLIEHRFSHYRGNNGTHRNPTAQEVKTRSQTGDVIRALNGKTRRNSNINANARVGQDF--HVADTSGEIVMAVTREETSRRIRAASRNTHKSVLWPR 218
            G +  WKKHFIT +SWFDLRL ILGFVS CR+LF+ P  FQ+DSLSPN RRF+ PRN SQD+ EHRFSH R   GTHRNPTA+E K RS  GD+ RA NGK RRN++ N NAR G DF  H       I++AVT+ ET + +RA  RNT   VL PR
Sbjct:  120 GDKLGWKKHFITHQSWFDLRLSILGFVSMCRYLFEDPERFQIDSLSPNCRRFLSPRNCSQDICEHRFSHIRAALGTHRNPTAREAKKRSAVGDLCRATNGKRRRNASRNPNARSGGDFEEHGDSEKKAIILAVTKVETGKEVRAWCRNTPAEVLCPR 276          
BLAST of mRNA_P-littoralis_Contig118.42.1 vs. uniprot
Match: A0A6H5JR14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR14_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 1.520e-32
Identity = 72/153 (47.06%), Postives = 97/153 (63.40%), Query Frame = 0
Query:   65 GEHAWKKHFITRESWFDLRLCILGFVSTCRFLFDRPAIFQVDSLSPNDRRFIGPRNLSQDLIEHRFSHYRGNNGTHRNPTAQEVKTRSQTGDVIRALNGKTRRNSNINANARVGQDFHVADTSGEIVMAVTREETSRRIRAASRNTHKSVLWP 217
            G+  WKKHFIT  SW D+R+CILGFVS CR+LF+  + F+V    P    FI  RN  QD+IEH F H R   G+HRNPTA + K R   GD++R L+G  R  +N N NAR G+DF  +    E+++ V   E S RIRA ++++ ++VL P
Sbjct:  602 GDETWKKHFITEFSWTDIRVCILGFVSMCRYLFEEDSRFKVSPRRPWPH-FINQRNCGQDVIEHCFGHMRQGLGSHRNPTAAQAKERGARGDILRGLHGPCR--ANYNRNARKGRDFVASGYRAEVMLPVGEGERSVRIRARTKDSDEAVLSP 751          
BLAST of mRNA_P-littoralis_Contig118.42.1 vs. uniprot
Match: A0A6H5JTX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX6_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 4.870e-21
Identity = 53/124 (42.74%), Postives = 78/124 (62.90%), Query Frame = 0
Query:   69 WKKHFITRESWFDLRLCILGFVSTCRFLFDRPAIFQVDSLSPNDRRFIGPRNLSQDLIEHRFSHYRGNNGTHRNPTAQEVKTRSQTGDVIRALNGKTRRNSNINANARVGQDFHVADTSGEIVM 192
            WK HFIT  SW D+R+CILG VS CR+LF++ + F++  LS +   FI  R + QD++EHR+ H     G+H NPTA + K R+   D+ R+L+G +R N     +AR G+DF  +   G I++
Sbjct:   91 WKAHFITDHSWTDIRVCILGTVSMCRYLFEKDSRFKIYPLS-DVPHFINLRCIGQDIVEHRYGHMCQCLGSHCNPTAAQAKERAAQEDLQRSLHGISRAN-----HARKGEDFIASGIRGRIML 208          
BLAST of mRNA_P-littoralis_Contig118.42.1 vs. uniprot
Match: A0A6H5JRH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH8_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 6.260e-7
Identity = 28/59 (47.46%), Postives = 39/59 (66.10%), Query Frame = 0
Query:   65 GEHAWKKHFITRESWFDLRLCILGFVSTCRFLFDRPAIFQVDSLSPNDRRFIGPRNLSQ 123
            G+ AWK HFIT  SW D+R+CILG VS CR++F+  + F++  LS +   FI  R + Q
Sbjct:  479 GDGAWKAHFITDHSWTDIRVCILGTVSMCRYVFEEDSTFKIPPLS-DVPHFINLRYIGQ 536          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig118.42.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5K5I6_9PHAE1.400e-5360.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JR14_9PHAE1.520e-3247.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTX6_9PHAE4.870e-2142.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRH8_9PHAE6.260e-747.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig118contigP-littoralis_Contig118:180593..182566 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig118.42.1mRNA_P-littoralis_Contig118.42.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig118 180592..182566 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig118.42.1 ID=prot_P-littoralis_Contig118.42.1|Name=mRNA_P-littoralis_Contig118.42.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=274bp
PHTSARGPRAEVKPLGSPEHCTSGASSPRFSNGRFAVGEDGHRHGGRALW
TPLAPVVFSLQLVGGEHAWKKHFITRESWFDLRLCILGFVSTCRFLFDRP
AIFQVDSLSPNDRRFIGPRNLSQDLIEHRFSHYRGNNGTHRNPTAQEVKT
RSQTGDVIRALNGKTRRNSNINANARVGQDFHVADTSGEIVMAVTREETS
RRIRAASRNTHKSVLWPRSASRPPSYASFRKRRPDHNPEMDHPNPYKYGF
WRDGPKRGKWGAPLFLHYVPLESA
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