mRNA_P-littoralis_Contig709.18.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig709.18.1
Unique NamemRNA_P-littoralis_Contig709.18.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig709.18.1 vs. uniprot
Match: D7FWE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWE0_ECTSI)

HSP 1 Score: 253 bits (645), Expect = 4.410e-80
Identity = 139/247 (56.28%), Postives = 173/247 (70.04%), Query Frame = 2 
Query:   23 RPGAEAAQRLLESGTRQEWDSAAHSYTRIVERLSQEKGKGDLVELDRWWREDLPKTLRARGAGGGKPFLVKDELVDVVRWKLLVGQMRATLLPFAKSTNPATVKAKSREAFEHLSGYYPRSSPSXXXXXXXXXXSLCHAATSASMRVPEETVKLAVKTLEKDLKGVGPATASAVLAALCGGCPFLADEVIEAVKGLGNRDYTIKTYLQVHDALAEKAKTLGTPWDAERVRKALWSRAMHARFDLPLP 763
            R G+E A RL++S  + EW++   SY+  V+RLSQEKGK +LVELD+WWR +LP  L +RGA    P+L+KDELV VV+WKL +GQMR +LL  AK T+P+TVKAKS  AF+ L    PR S                ++ +A+ R   E V  AV  L KDL GVGPATASAVLAA CGGCPF ADEVI+AVK  G R Y++K YL+VH+AL +KA +LGTPWDAERVRKALWS AMH+RF + +P
Sbjct:    4 RKGSEEAIRLMDSDNKVEWEATFQSYSASVKRLSQEKGKSELVELDQWWRTELPAALVSRGA---TPYLLKDELVKVVQWKLWIGQMRPSLLQRAKETSPSTVKAKSTLAFQQL----PRPS--------------LPSSPTAAARASPEAVSRAVNALTKDLYGVGPATASAVLAAGCGGCPFDADEVIDAVKRSGKRQYSLKEYLEVHEALDQKAVSLGTPWDAERVRKALWSCAMHSRFGMTVP 229
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BLAST of mRNA_P-littoralis_Contig709.18.1 vs. uniprot
Match: A0A6H5L062_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L062_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 1.420e-38
Identity = 83/146 (56.85%), Postives = 98/146 (67.12%), Query Frame = 2 
Query:  329 VKAKSREAFEHLSGYYPR-SSPSXXXXXXXXXXSLCHAATSASMRVPEETVKLAVKTLEKDLKGVGPATASAVLAALCGGCPFLADEVIEAVKGLGNRDYTIKTYLQVHDALAEKAKTLGTPWDAERVRKALWSRAMHARFDLPLP 763
            VKAKS  AF+ L    PR SSP+                 +A+ R   E V  AV  L KDL GVGPATASAVLAA CGGCPF ADEVI+AVK  G R Y++K YL+VH+AL +KA +LGTPWDAERVRKA+WS AMH+RF + +P
Sbjct:    8 VKAKSTLAFQQL----PRPSSPT---------------TATAAARASPEAVSRAVNALTKDLYGVGPATASAVLAAECGGCPFDADEVIDAVKRSGKRQYSLKEYLEVHEALDQKAASLGTPWDAERVRKAIWSCAMHSRFGMTVP 134
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BLAST of mRNA_P-littoralis_Contig709.18.1 vs. uniprot
Match: A0A7S2UUL7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUL7_9STRA)

HSP 1 Score: 125 bits (315), Expect = 2.500e-31
Identity = 88/227 (38.77%), Postives = 114/227 (50.22%), Query Frame = 2 
Query:   71 QEWDSAAHSYTRIVERLSQEK----GKGDLVELDRWWREDLPKTLRARGAGGGKPFLVKDELVDVVRWKLLVGQMRATLLPFAKSTNPATVKAKSREAFEHLSGYYPRSSPSXXXXXXXXXXSLCHAATSASMRVPEETVKLAVKTLEKDLKGVGPATASAVLAALCGG-CPFLADEVIEAVKGLGNRDYTIKTYLQVHDALAEKAKTLGTPWDAERVRKALWSRAM 736
            +EW      Y   V+ LS  K    G   L ELD WW   LP+ +RAR      P+L  DEL +V+ WKL  G+ R  L+   +    + V++ S+ AF  L                           S +   PE  V  AVK L K L+GVGPATASAVLAA C   CPF++DE +EAV G   R+YT+  Y+ + D L EKA  LG  W AE+V KA+W  A+
Sbjct:   14 EEWTETLEKYQMCVQALSATKKYKSGDQSLSELDHWWTTVLPQAIRARNPA---PYLTLDELSNVMAWKLRKGKFRP-LMRLIRQNTESQVQSCSQAAFLKL------------------------LPASGTKHKPE--VAEAVKELSK-LRGVGPATASAVLAAYCPEECPFMSDEALEAVNG--KREYTLSAYISLRDGLCEKATNLGPSWTAEKVGKAMWVDAV 207
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BLAST of mRNA_P-littoralis_Contig709.18.1 vs. uniprot
Match: A0A151QX49_CAJCA (Uncharacterized protein n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151QX49_CAJCA)

HSP 1 Score: 111 bits (278), Expect = 5.410e-26
Identity = 87/227 (38.33%), Postives = 109/227 (48.02%), Query Frame = 2 
Query:   77 WDSAAHSYTRIVERLSQEKGKGDLVELDRWWREDLPKTLRARGAGGGKPFLVKDELVDVVRWKLLVGQMRATLLPFAKSTNPATVKAKSREAFEHLSGYYPRSSPSXXXXXXXXXXSLCHAATSASMRVPEETVKLAVKTLEKDLKGVGPATASAVLAALCGGC-PFLADEVIEAVKGLGNRDYTIKTYLQVHDALAEKAKTLG------TPWDAERVRKALWSRAM 736
            W  A  +Y   +  LS EK K DLV LD ++R  LP  L  R      PF+   EL D++RWKL  G+ R  LL F  S + A VK  S++AF+ L                             S  V E TV          LKGVGPATASAVLAA      PF++D+ +EA  G  ++DY++K YL+  + L  KAK L       TP D ER   ALWS AM
Sbjct:   11 WKEALSAYPSRLHSLSLEKNKPDLVSLDDFYRNHLPPLLHRRNPN---PFITTRELSDLMRWKLTRGKWRPRLLDFVSSLDDAVVKFASQKAFQSL--------------------------PDVSKAVSELTV----------LKGVGPATASAVLAAFAPHLIPFMSDQAMEAALG-NSKDYSLKQYLKFTEKLQMKAKELSSEGESFTPSDVER---ALWSSAM 194
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BLAST of mRNA_P-littoralis_Contig709.18.1 vs. uniprot
Match: A0A0D9ZCL0_9ORYZ (Uncharacterized protein n=1 Tax=Oryza glumipatula TaxID=40148 RepID=A0A0D9ZCL0_9ORYZ)

HSP 1 Score: 110 bits (275), Expect = 2.270e-25
Identity = 86/234 (36.75%), Postives = 117/234 (50.00%), Query Frame = 2 
Query:   59 SGTRQEWDSAAHSYTRIVERLSQEKGKGDLVELDRWWREDLPKTLRARGAGGGKPFLVKDELVDVVRWKLLVGQMRATLLPFAKSTNPATVKAKSREAFEHLSGYYPRSSPSXXXXXXXXXXSLCHAATSASMRVPEETVKLAVKTLEKDLKGVGPATASAVLAALCGG-CPFLADEVIEAVKGLGN-RDYTIKTYLQVHDALAEKAKTLGTP---WDAERVRKALWSRAMHAR 745
            SG   EW +A  +Y R +  L    GK DLVE+D ++R DLP  LR R     +PFL K ELV +++WKL  G+ R  L+ F K    A V++ SR+AF  L                     LC A T  ++                 LKGVGPATASAVLAA      PF++DE +  V  LGN ++YT+K YL   + L  K+K L +    +    V +ALWS A+ ++
Sbjct:    9 SGDAAEWRAALAAYDRRLAAL----GKPDLVEVDSFYRRDLPDLLRRRDP---EPFLAKPELVRLLQWKLSRGKWRPRLMDFVKGLEDAVVESASRKAFAAL-------------------PDLCKAITELTV-----------------LKGVGPATASAVLAAYAPDVAPFMSDEAM--VAALGNAKEYTLKQYLAFAEKLQTKSKELSSGEEVFTTSDVERALWSSAVASK 197
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BLAST of mRNA_P-littoralis_Contig709.18.1 vs. uniprot
Match: A0A6H5KYU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYU6_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 3.270e-25
Identity = 57/102 (55.88%), Postives = 74/102 (72.55%), Query Frame = 2 
Query:   23 RPGAEAAQRLLESGTRQEWDSAAHSYTRIVERLSQEKGKGDLVELDRWWREDLPKTLRARGAGGGKPFLVKDELVDVVRWKLLVGQMRATLLPFAKSTNPAT 328
            R G+E A RLL+S  + EW++A  SY   ++RLSQEKGK +LVELD+WWR +LP  L +RGA    P+L+KDELV VV+WKL +GQMR +LL  AK T+  T
Sbjct:    4 RKGSEEAIRLLDSDNKVEWEAAFQSYAASIKRLSQEKGKSELVELDQWWRTELPAALVSRGA---TPYLLKDELVKVVQWKLWIGQMRPSLLQRAKETSANT 102
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BLAST of mRNA_P-littoralis_Contig709.18.1 vs. uniprot
Match: UPI0019D4F529 (uncharacterized protein LOC120687286 n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D4F529)

HSP 1 Score: 108 bits (269), Expect = 1.280e-24
Identity = 93/237 (39.24%), Postives = 124/237 (52.32%), Query Frame = 2 
Query:   59 SGTRQEWDSAAHSYTRIVERLSQEKGKGDLVELDRWWREDLPKTLRARGAGGGKPFLVKDELVDVVRWKLLVGQMRATLLPFAKSTNPATVKAKSREAFEHLSGYYPRSSPSXXXXXXXXXXSLCHAATSASMRVPEETVKLAVKTLEKDLKGVGPATASAVLAALCGG-CPFLADEVIEAVKGLGN-RDYTIKTYLQVHDALAEKAK--TLG----TPWDAERVRKALWSRAMHAR 745
            SG    W +A  +Y R +E L     K DLV +D ++R DLP  LR R      PF+ K EL  +++WKL  G+ R  L+ F K  + A V++ SR+AF  L    P  S              C++  S ++R  E   +L V      LKGVGPATASAVLAA      PF++DE +  V  LGN ++YT+K YL   D L  KAK  T+G    TP D ER   ALWS A+ ++
Sbjct:    9 SGDAAAWRAALAAYDRRLEALD----KPDLVAVDFFYRNDLPALLRGRDPD---PFIAKPELARLLQWKLSRGKWRPRLMDFVKGLDDAMVESASRKAFAAL----PDLS--------------CNSPLSRTVR--EAITELTV------LKGVGPATASAVLAAYAPDVAPFMSDEAM--VAALGNAKEYTLKQYLAFADKLQAKAKELTIGEESFTPSDVER---ALWSSAIGSK 207
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BLAST of mRNA_P-littoralis_Contig709.18.1 vs. uniprot
Match: A0A0S3RPQ4_PHAAN (Uncharacterized protein n=7 Tax=Phaseoleae TaxID=163735 RepID=A0A0S3RPQ4_PHAAN)

HSP 1 Score: 107 bits (266), Expect = 3.050e-24
Identity = 84/227 (37.00%), Postives = 108/227 (47.58%), Query Frame = 2 
Query:   77 WDSAAHSYTRIVERLSQEKGKGDLVELDRWWREDLPKTLRARGAGGGKPFLVKDELVDVVRWKLLVGQMRATLLPFAKSTNPATVKAKSREAFEHLSGYYPRSSPSXXXXXXXXXXSLCHAATSASMRVPEETVKLAVKTLEKDLKGVGPATASAVLAALCGGC-PFLADEVIEAVKGLGNRDYTIKTYLQVHDALAEKAKTLG------TPWDAERVRKALWSRAM 736
            W  A  +Y   ++ LS  K K +L+ LD ++   LP  LR R      PFL   EL  +++WKL  G+ R  LL F  S + A VK+ S +AF+ L                             S  V E TV          LKGVGPATASAVLAA      PF++DE +EA  G  ++DY++K YL+  D L  KAK L       TP D ER   ALWS A+
Sbjct:   11 WKEALSAYQSRIQTLSLTKNKPNLISLDEFYCNQLPSILRQRNPN---PFLTTSELSSLMQWKLTRGKWRPRLLDFVSSLDDAVVKSASEKAFQSL--------------------------PDVSEAVAELTV----------LKGVGPATASAVLAAFSPHLTPFMSDEAMEAALG-NSKDYSLKQYLKFVDKLQMKAKELSSESDSFTPSDVER---ALWSYAV 194
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BLAST of mRNA_P-littoralis_Contig709.18.1 vs. uniprot
Match: UPI0010FB5BBC (uncharacterized protein LOC109791858 isoform X2 n=1 Tax=Cajanus cajan TaxID=3821 RepID=UPI0010FB5BBC)

HSP 1 Score: 104 bits (260), Expect = 7.450e-24
Identity = 77/204 (37.75%), Postives = 99/204 (48.53%), Query Frame = 2 
Query:   77 WDSAAHSYTRIVERLSQEKGKGDLVELDRWWREDLPKTLRARGAGGGKPFLVKDELVDVVRWKLLVGQMRATLLPFAKSTNPATVKAKSREAFEHLSGYYPRSSPSXXXXXXXXXXSLCHAATSASMRVPEETVKLAVKTLEKDLKGVGPATASAVLAALCGGC-PFLADEVIEAVKGLGNRDYTIKTYLQVHDALAEKAKTLG 685
            W  A  +Y   +  LS EK K DLV LD ++R  LP  L  R      PF+   EL D++RWKL  G+ R  LL F  S + A VK  S++AF+ L                             S  V E TV          LKGVGPATASAVLAA      PF++D+ +EA  G  ++DY++K YL+  + L  KAK LG
Sbjct:   11 WKEALSAYPSRLHSLSLEKNKPDLVSLDDFYRNHLPPLLHRRNPN---PFITTRELSDLMRWKLTRGKWRPRLLDFVSSLDDAVVKFASQKAFQSL--------------------------PDVSKAVSELTV----------LKGVGPATASAVLAAFAPHLIPFMSDQAMEAALG-NSKDYSLKQYLKFTEKLQMKAKVLG 174
[Close]
BLAST of mRNA_P-littoralis_Contig709.18.1 vs. uniprot
Match: A0A6P5GAG0_ANACO (uncharacterized protein LOC109721803 n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5GAG0_ANACO)

HSP 1 Score: 105 bits (263), Expect = 8.520e-24
Identity = 87/239 (36.40%), Postives = 116/239 (48.54%), Query Frame = 2 
Query:   53 LESGTRQEWDSAAHSYTRIVERLS-QEKGKGDLVELDRWWREDLPKTLRARGAGGGKPFLVKDELVDVVRWKLLVGQMRATLLPFAKSTNPATVKAKSREAFEHLSGYYPRSSPSXXXXXXXXXXSLCHAATSASMRVPEETVKLAVKTLEKDLKGVGPATASAVLAALCGG-CPFLADEVIEAVKGLGNRDYTIKTYLQVHDALAEKAKTLG------TPWDAERVRKALWSRAMHAR 745
             E G    W +A  +Y   VE L+     K +L+ LD ++R DLP  LR RG    KPFL K EL+ VV+WKL  GQ R  L+ +A++   A V+A SR AF                           A    +  V E T           LKGVGPATASA+LAA      PF++DE +  +  +GN++YT+K YL   + L +KAK L       TP D ER   ALWS  + ++
Sbjct:    3 FECGDAGAWRAALGAYAARVETLAGAAASKRELLPLDSFYRGDLPLLLRRRGP---KPFLSKSELLRVVQWKLSRGQWRPRLMGYAEALGEAEVEAASRAAFA--------------------------AIPDLARAVSELTA----------LKGVGPATASAILAAFAPEIAPFMSDEAM--MVAMGNKEYTLKHYLAFAEKLQKKAKELSVDGESFTPTDIER---ALWSSVVGSK 197
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig709.18.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWE0_ECTSI4.410e-8056.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L062_9PHAE1.420e-3856.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2UUL7_9STRA2.500e-3138.77Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A151QX49_CAJCA5.410e-2638.33Uncharacterized protein n=1 Tax=Cajanus cajan TaxI... [more]
A0A0D9ZCL0_9ORYZ2.270e-2536.75Uncharacterized protein n=1 Tax=Oryza glumipatula ... [more]
A0A6H5KYU6_9PHAE3.270e-2555.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0019D4F5291.280e-2439.24uncharacterized protein LOC120687286 n=1 Tax=Panic... [more]
A0A0S3RPQ4_PHAAN3.050e-2437.00Uncharacterized protein n=7 Tax=Phaseoleae TaxID=1... [more]
UPI0010FB5BBC7.450e-2437.75uncharacterized protein LOC109791858 isoform X2 n=... [more]
A0A6P5GAG0_ANACO8.520e-2436.40uncharacterized protein LOC109721803 n=3 Tax=Anana... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig709contigP-littoralis_Contig709:73349..82025 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog227086.JGI_V11_82284
PFAMsDUF1479
Model size874
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0001654,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0007275,GO:0007423,GO:0007444,GO:0008150,GO:0009888,GO:0022416,GO:0032501,GO:0032502,GO:0035220,GO:0035295,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0048513,GO:0048731,GO:0048749,GO:0048856,GO:0060429
Exons6
Evalue1.16e-26
EggNOG OGs28ITR@1|root,2QR55@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-09_004040.1
Cds size864
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig709.18.1prot_P-littoralis_Contig709.18.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig709 73359..82025 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791477.5808856-UTR-P-littoralis_Contig709:73348..733581680791477.5808856-UTR-P-littoralis_Contig709:73348..73358Pylaiella littoralis U1_48UTRP-littoralis_Contig709 73349..73358 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791477.5970411-CDS-P-littoralis_Contig709:73358..734441680791477.5970411-CDS-P-littoralis_Contig709:73358..73444Pylaiella littoralis U1_48CDSP-littoralis_Contig709 73359..73444 +
1680791477.6072156-CDS-P-littoralis_Contig709:75237..753161680791477.6072156-CDS-P-littoralis_Contig709:75237..75316Pylaiella littoralis U1_48CDSP-littoralis_Contig709 75238..75316 +
1680791477.6163242-CDS-P-littoralis_Contig709:76663..768161680791477.6163242-CDS-P-littoralis_Contig709:76663..76816Pylaiella littoralis U1_48CDSP-littoralis_Contig709 76664..76816 +
1680791477.6312027-CDS-P-littoralis_Contig709:79156..794141680791477.6312027-CDS-P-littoralis_Contig709:79156..79414Pylaiella littoralis U1_48CDSP-littoralis_Contig709 79157..79414 +
1680791477.6413548-CDS-P-littoralis_Contig709:81240..813001680791477.6413548-CDS-P-littoralis_Contig709:81240..81300Pylaiella littoralis U1_48CDSP-littoralis_Contig709 81241..81300 +
1680791477.6524155-CDS-P-littoralis_Contig709:81797..820251680791477.6524155-CDS-P-littoralis_Contig709:81797..82025Pylaiella littoralis U1_48CDSP-littoralis_Contig709 81798..82025 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig709.18.1

>prot_P-littoralis_Contig709.18.1 ID=prot_P-littoralis_Contig709.18.1|Name=mRNA_P-littoralis_Contig709.18.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=288bp
MGKPRPGAEAAQRLLESGTRQEWDSAAHSYTRIVERLSQEKGKGDLVELD
RWWREDLPKTLRARGAGGGKPFLVKDELVDVVRWKLLVGQMRATLLPFAK
STNPATVKAKSREAFEHLSGYYPRSSPSSPSAPSSPSSSLCHAATSASMR
VPEETVKLAVKTLEKDLKGVGPATASAVLAALCGGCPFLADEVIEAVKGL
GNRDYTIKTYLQVHDALAEKAKTLGTPWDAERVRKALWSRAMHARFDLPL
PLPPPPPPPPAAAAAAAAAGKSLLSPTTPPPPPASPAP
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mRNA from alignment at P-littoralis_Contig709:73349..82025+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig709.18.1 ID=mRNA_P-littoralis_Contig709.18.1|Name=mRNA_P-littoralis_Contig709.18.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8677bp|location=Sequence derived from alignment at P-littoralis_Contig709:73349..82025+ (Pylaiella littoralis U1_48)
AAAAGGAAGCATGGGGAAACCAAGACCGGGGGCCGAGGCCGCGCAGCGTC
TCCTGGAATCCGGCACTAGGCAAGAATGGGACAGCGCTGCCCACAGGTCA
GTTCCAGTTAGCCAAACAGTTGGCCAGACAGCAGTCGGTCGGGTCGGTCG
AGCGGCCTGTGTGTCTGCCTTTGTTTCGGCGCTCTGCCGGCATCTCTCTT
CTTCTGCCTCCTTGAGATAAGACGTACAGCAGTAGAGTACCCGCGGTTGG
TTGTCACTTTTGCTCGCGACAAGAACCTGGCGGTCTTTTTTTTATTCTCG
AACTGATGGTAAAAAAGAAAAGGGAGAACGACGTTTTCGCATCAAGGCTT
GATCTTGATTGTTCGCAGTATTTCCTACAGTAGTAGTAGTAGTAGTAGTA
GTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTATAGTGCTGCCTATTTGT
CAGTCTGGTCCTAACTGGCCCAAAACAGAGGTAACAACTTCCATTTATCA
AGCCGCACAGAAGTGCCCGCAGTATTTCCTACAGAGGTACCGACTGGTTC
ATGATAGAGATGACAGCTCACATTCGTCGCAAGTGCCAGCAGCATTTCCT
TTGCCTAGTGTGATGGACCTTTTTCTTTTATGTCTGCTCAGTCCCGACTA
GTCCAAGAAAGAGAGAGAGCGGCTTTTATGTGAGGTGCCCGCGTTATCTC
CTAGTGATTAATCTGTTTGTCTCTTGGACTCCGACTGGTCCAAAAACGAG
GGAAAGGGCTTTGTCTCATCATTCGGGTGCTGCTCGCATTTCATTTCACC
TGCTAGTCGACTCAGTGTGCGGTGTGTTTCTGTTGTTCGGGTCTTGAATC
ACACTCGTACGTCCCGAACAATAGAGGCAACAAACAAACGTTCATCACGA
GCGAGATACTGCTGTTGTTACGTTCCGGTAATTTGTTTTCCGTCGAAAAA
TACTACTTCAGACTACTTCGTACTGTATTATTACTATTATTATTGTTATT
ATTATTATTACTCCGTATTATTTACTCCGTATTTTTTTTTGTGTTGGTGG
TTAAATCGTACTCTACCAGTCAGACACAGGCACCGCACAAGGAAGGTGAA
GAAAAAACGAAAAAACGAAGATAAAAAAAAAAATCCTGCCTTGACTTCCT
CCCTTCATTCCTGTCTGTTGTGACCCCCCCCCACCCGGCTGATGTGTGAC
GCGCCCACGTAACAAAAGTTCAAAACGGGAGCGTGGCGATTTGTTTTCAG
TATTTGTTTTTTTGGTACAATCGTACTTCGTATGTGATATATTTCGAAGT
ACAAGACAAGCACCGCAGAAGGAAGGTGGAGAAAAAACGAAAAAACAAAA
GAAAAACTCGATCATATCATACCAGGTATGTATGTTGATCTGACCCCGGC
TGATGCGCCCACGCACATATTTTACCTGTATCTACCGGAAGGTCTACGCT
GTAGACCGCTGCCGTCCAGAATATACGGGACGGCAGCACACGCCCCGCCC
CCACTTTTTTCGTGTGCATTATTATGCATGCGTCGAAGCAGAGCAACGCC
TCTTCCCGCATTTGTAGCTATTTGTTGGAATGATTTGTCTGTTCGTTGAT
TTGATTTGATTTGATTTGATTCGATTTGATTTGGTTTGACTTGGTTTGAC
TGGCTGCTGCTGCTTTTGACGCTGTTGTGGGCCTCCCAGGTGTTCTGTCC
CCTTCCTAGATCACACCGCGCACATGCTGAGCCCAAGGCAATGCCAGGGC
CCTTTCGGTACGGTCGAAAGATATCTCCCTCCCCCCACCCCACTCTTTTC
TCAACTATGAAAAAAAAATCTCTCGCTCGCACCCCCCCCCCCCCCCTTCT
CCCCCTTTTTTTCTTTTTTCGCCTCGGTTACACCGACAGCTACACCCGCA
TCGTTGAGCGCTTGTCGCAGGAGAAGGGCAAGGGCGATCTGGTTGAGCTG
GACCGCTGGTGGCGCGAGGTGAGCGCGACCACGGGGATTCGTATCTACCT
GTTTCTCTTTTGTTTTGCTCTGTAAGGTTTCCCCGCTCACATCATACCAA
GAAACTCTTGCTGTAATGGTAAAATACCAGAGAAAGCTTGTCTTGTCCTT
CTAGGACAGCAGAGGTGGGGAGATCCCCAACATCAGCTTGATGCGTGGTT
GATTGACTGTCGGGAAGCGAGGGCGCGGGAAAGTGGTTTGGTGTCAAGGC
CCGCCGTCTTAGTCGACCGCCACTCACTGCTGTACGGAGCAGAGACTGCC
TTTCGTGTGCATCGTTTCATGCGCATGATGACGCCGAGGAATCGTTGGTC
GACGGGATTAAGAAGGAAGGATGTATGATGTGATAACTCTGAGAGGGTTT
TCATATCAGTTTTTTCAACGTTTCGGACAACAGAAAGAAATTTAACGCCA
CCACCAGCCACGAATCACACCTTAACACACCCTCTAGCACAATATACTCG
TACAAAAAAAAACGGTCGTACTCTCTTCTACCCACAAACTTTAACATTAT
TTTGCAGCGGCATTGTTTGTTGCACGTGGTTTCGAGGCGACCTTTGCTAC
AGAGTGAGACAGCCGACGACGTGCGGCGGGCTGCCATGTCCGGGGCTGAA
TCGAACCACTCCGCGAAACGAGTTTTTTTCTGCCGTGTCGTTGCCGTGAC
AGCAGAGCTTTCCGGACCCGTAGAAATCATTGCTTGGTGTTTGTTGGCTG
GCTGGCGCCCTGTTCCCTGGATGTATTTGGAGTACTGCTGCACCGTACCG
TAACCGAGCTCTCAATATCGTTCCCGGCTAGGATCCCGTGGCATCTTGAG
CAGTGAGTGGTATGGTTCCGCGCGCGGTGTTGCACAGGAAAAACAAGGCT
TGCGCCACAGGTACGGTATAACATCGTACAAATATATATAATGTGCTTCG
TATATCTATTTTTGTGTCGAACTTGGTTGGTTTGTTTCGGCCAGATACGG
CAAGACGCGCGGAGCCACCGTTCCCCTTAGGCCCTATCAGCCACGACGTG
AATGGTTGAAACCCTCTACCTCACGAACAGCAATCGATCGGGGTATCATA
GCCGACTCTCGTTCGCCTGCTCACCCTTGTCCCCCGGTTCCACTCCCTGT
CGTTCGTACGCGTCGCTCGATCTACAAGTACGACGAGGACTTGCCGGAAG
AAAAACCCTTCCTGCGTGTTGCTGACGGAACGATATGTGTATGATACTCA
CGAATGAAAAAAAAATGAGGGACGAATTCTTCCGCTAAATTTTGACCTCT
TCCGCACCCTCTTTCTCCCCCTTCTGCCACTCTGCCCGTATCGGCGTCTT
GTTTGTTCCTTCAAGGACTTACCGAAGACCCTTCGCGCCAGAGGAGCAGG
CGGGGGCAAGCCCTTCCTCGTGAAAGACGAGCTCGTCGATGTCGTACGGT
GGAAGCTGTTGGTAGGGCAGATGCGGGCCACCCTCCTGCCGTTCGCGAAG
TCGACCAATCCCGCCACGGTAAGCGCGTGTGTATGGCGTGTCTGTTGTTG
TTGTTGTTGTTGTTGTCGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTT
GAAAAGTGCTGTGGCTACAATAACGAAAGTAGCACAAAACAACCGCATCT
CACACACGAAAGGGGGCAGGCACTGCATGTGTGTGCATGTGTGTGTGTGT
GTGCATGTTTCTGTTTGTGTTCCTCTGTGTGTTTCTCTGTGTGTTTCTGT
GTGTACGTTTTTTTTCTGTGTGTGCGTCTGTTTCTCTGCGTGCTTCTTCG
TATGTGTATTTCTATGTTTGCGTGTGTGATACAAATGTGTGCGAGTATGG
CCCAAATATCGTAGTGAACGCCCCGGCTGACTCTCGTCGACGCTTTTCGC
GTCAACTACTTCGAGTACGAGGGTATGCGTAGCACACGAAAATCCATGGT
GATGACAGTCCTGTCCAACAAACTCTATCTCTCGTCGTCACTCGGGGGAG
AAGTATGTATGACTGAATGGATTTACTTAATGATAAAAATACGGATGATG
TCGTGTGAGCCAAGGAATGATGACGTGTGAATGGTGCCGTGTGAGCCATG
TGGATGGGAATGCATGAACGGACGTGGTGGGTACGGTCGAATGAATGTAT
GAGCTAGTGGAATAGGATTTATCGTTTGAACCAGTTGGTGGTTGAATGCA
TGAATGGACTGAATGGGCAAGTGAATAGATGAACCGATGAATGAATTGGA
TGGACAGATGAATAGAAATTATGTAATGAATCAAAGGCTGAAATCAATGG
ATTGATTCGACGAAGGAAAACACGAAGTTAATGAATAGGTCCTATAATAT
TACGGGAAGAAAGTGTCGGATGGATGACCAACTTGAGTGAATTAATGTTG
TGAGTAAGCCGAATGATTCATTTATTTATTCATTTAAGCCATATTCCTTT
CGCATCGTTCAACTCAGTTGCCCGTTCTTGGCTCAATTGAAAAAGCCTCT
CTCAATTCATTCGCTCATTGTAGCAATTCATTCATGCCTTTTATTTCATT
TTGTCTCTATTTCATTCTTCACTTCACTTTACTTTAAACTAATCAATACA
CTTTCACGAAAATTGACGAACGAAAGAACGGAGTTAATGAATGGATGCGT
TAAAATAAATGGAAGAAAATAACGGATTGAATGAATCGAAGGAAACCTGT
CGCAACACTCCATTCATTTTTCCATTCAAGCCGTAGTTTTGTCATTCCAT
TCAACTCGTTTGTCTATTACCGGAGTATTACCTTTATCTCCATAAGTCTC
TCTCCGTTTATCCGCTCATTTAAGGCTTGCATTCATCCATTCCTTTCATC
CATTCACTATAAACCATTTCATCCCTCAGTCCACAAACTAAGTCGTCCAT
TCAACGCATTTATCCACTGCGTTGATTTCCGAACTCGAGAAATCCAAGTC
CTTCGATTTGTTTAACTCGTAGTTTCACTCATTTTCATAGTCACCTTCAA
ACTCATTTATCGATTCGTATCATTCATGCATTTCGTCATTCATCTATTCA
TCCACCCATTTAATTCTTATCACTTAATCCTACCTATTCCGTTCACTCAT
CCATCCGTTCCGTTCACTCACTCATTGTTTATTCACTCATTTTATTCCAA
TGATATCTTCTCTTTGACCCACCAGTTCACCCATTCCATTCTATTTGTGT
ATTCTTCTATTCATTAGTCCATTCACCCATTTTGTTCCAATGGTTAATCC
CTTCATATCCATTCCGTTCACCCATTCGTCGATTCTATTTCACTCATTCA
TTTCTTTATTAATTCGGCCATTTTGTTCCCTTCCCTAATGCTATCCACCC
CATTCACCAACCCATTGCATTCGTCCCTACGTTTACCCCGCCTCATCATT
GCGCTCATTCTGTTTTCAGCCATCTCTGGAGTGTGCCAATTCATCCCTTC
ATCGATTTGTTTTATTTCTCCTTCTGTCACATTTTGTTGTTGTTTTCATT
GACTTATTTTCAAGAACAAAAGTTTTCTTTCATCCTCTCAAGACCGATAA
CGTCGAACCTGGGGGGGAGGTGATGGTGGTCGGCGCACTGATTCATCATT
CGCCGGGACGCCTGGTCGTCGTCAGCGGTGCTTTGACTTCCGGCGTGCTG
TTTTTATTTTGTTGGAGTTGTCGACGAAACAACCCTGTACACCTTGCGGG
GTACGAGCGCAGACATGAAGAAGGTAGAAGTGACGAAACTGTCCGAAGCA
ACTGGTATCGTGCATTATAGATGCGCACGTGAAAGGTCAAAGCGACGAAA
CGATCTAATCCAGCTGGGCACATCCCACATATATGACACACAAAACATAC
ACGCGAAGGTGAAAGCCAAGAGCAGAGAGGCGTTCGAGCACCTCTCCGGG
TACTATCCTCGTTCCTCGCCCTCGTCCCCGTCAGCACCGTCATCGCCATC
GTCATCGTTATGCCATGCCGCTACATCGGCGTCGATGCGAGTGCCCGAAG
AGACGGTGAAGCTGGCGGTGAAGACCCTGGAGAAGGACCTCAAGGGGGTG
GGGCCCGCGACGGCCTCGGCTGTGTTGGCGGCTCTGTGCGGGGGGTGCCC
CTTCCTCGCCGACGAGGTGATTTCACGAGCATGTCCATTTCATTCCAACT
TGTTCGCAGTTGTGCCTGGTTTCCCCGTATGATATTATACTTCGTATGAA
TTTAGAGTTTTCGTCTGGTTTATTTGACAAAGTTGGAACCATGTTTTGGT
AAGATATACTCCGTATATCGTTCTCGGAGAGTTTGTCTGGTTTGGTTTGG
CAGCTAATTGTGTCAGTATGGTTTCGGAGGTTTGTCTGGTTTGTTTGACT
GACTTATCTATATCGTTTTCGTCTGGTTGTTGGGCGGGTGAATGCATGTA
TCGGTATGATTATGATGCGTGGGCCAGACAGTATTTAGTCCGTTGGCACA
CAGAGGAACTACGCCGCTGTTCGACGGTTCTCTGCCCTAACGTAGACCAA
GAGAAACGATGGAGGTTCAAGATGGAGAGGGTCGAGAGACTCGGCGGACC
CTTCAAGTGAAAGGCGTGTGAGAAGATGGATACCGTAGGTCTGTAGGGGA
GTCCGGCGGGGGAGCGACAGACGGGAACGAAGACCACGAGGGGAGGGGTT
TCCATCTGACATGTCGGGAAGAAACACACACGATGAAGGGCGGTACAACG
CCGGGGGTACAGTAGTATTCCGACCTACAGCAAGAACACTGAACTGAAAG
CGCACGGCGAATAGCGGTACAAAGCCGGGGGGATTTATATGATAGTCCAA
CCTGCAGCTATACTGGAATACCACTGCAGAGTATCCTACAGGAGGACATT
TGGTAGTCCGGTTGTGTCGTTTTCTCTATGGTCCTATCGCACGTGCGGTG
ATCCGATGACTCGCTCGCCTATGATACGGGACGGAGACTTTTTTTGCTGT
ACGGGTACAGAACAGTACCAAGAACATACGACGATTGAGTATCACAACCA
ACACAACAAAGTAGTTTAGCCGCACAGTTTCAGGTACCAGATCTGTTCTG
CTTGAAGTTTTGTGTGTCATATCATACGTGAAAGCAACTTGAAGTATGCA
CATGCGGTGGGATGACACAGGATGGAAATGTCTACGTTCTCATCGGCGGA
AAATTGTGAGTGAAAGCCGCACGTATCACACCTGGGGCTGAACACAAACC
GCTTTGAACGTAGTGCGGCAGACAAACGTGAAAACTTGGCTTTCTTATTG
TTGAATTTCCTCTATTCATACGTGAAATTTCGGTTTCCTTTCTGTTGAAA
GTTCCTCTATTCATGCGTGAAAACTTGGCTTCCTTTCTGTTGAAGTTCCT
CTAATCATGCGTTCGAGGTGGGTCGAAAGCGCGTTGCGTGTGACTGAATG
AAACCAACTTGAAACGTAGCCTACAGCACACCATACGGGAAACGAGAGCC
AGAATTCGAGCTGTCGCCACCCACAGCGGCAGCTCCGGCAAACTGTTGAG
CCCTGCTGCTGCTCGTTCTGCCTCTCTTTCGTTCTTTTTCTGCAGGAGGA
ACAACGTTCGTGGCTCCCCTTTGTTGTTGTTGCTGTTGTTGTTGTTTTCG
TCAAAATTCGTATTTTTGATTAAAAAAATCTCTGCGCCCGCGGCAATCGC
GTATACGCACTTGCACGTCATTCGCCTGCCTTGGCTCTCTTTATTGCACC
AGTCATGGCGTCTCACCATTTGTGACCACGGGCTAGACTGCGGCGGTAGT
GAACTAATGTGAGAATCAACAACAACAACAACCATGTCATTTTTTTTTTT
CTCCACCCGCGGCAACCGCGTGTGCATATAATACTTACACGGCATTCGCC
TGCCTTGGCTTCCTCTTTCGCGCTAGTCATGACGTCACACCACACCACAT
CACATCAATGACGTTGTGTCGCATCGCGCCTCAACGTGGCAGGTCATCGA
AGCCGTCAAGGGCCTGGGAAACCGCGACTACACCATCAAGACGTATCTCC
AGGTACCGTGCGAGCACCTACCGCACGCGGAGAATGTATCGGGTAGTAAC
TGTACCGCACTCTGCATGAGTTGTGTCGCACCCCCCCCCCCCCCAAGTAT
ACACACTATTGTTTTGTGACAATTTCATTGACAGTTGCCATGACAGCAGT
GTCGTGACATGTCGTGGCATGCCACGGCACTGTCATGACACGGCTGTCGT
GACAGTGCGCAATAGTTTCAACCGAGCCCCCAGAAACTAGCACCTCCCCT
CCACAAAGTTTTTTTTTATTCGAAAAACGTCAAAAAATTTCATTCGCGTA
CCTGTATCATACGATGTATTTCTAAACCGCCCCTGAATCATGACTCAGCG
GTCAACCCAGGTACCAGGTTATACTAGTACTAGCAGTGATACCAGGCACC
AGTATACTAGTTCTAAAATGTGTGGGTGTACCGACTGCCGTCCCTCAAAT
CCCGCCCCCGCGTCGCTGCACATGCTGCATGGATGCATGACTATCATAGG
TTCACGACGCCCTGGCCGAAAAAGCCAAGACACTAGGAACTCCTTGGGAC
GCGGAGCGTGTCCGGAAGGCCCTGTGGTCCCGCGCGATGCACGCCCGCTT
CGACCTCCCGCTGCCGCTTCCACCACCACCACCACCACCACCAGCGGCGG
CGGCCGCCGCCGCCGCCGCAGGAAAATCCCTCCTCTCGCCAACAACTCCT
CCTCCTCCTCCTGCGTCGCCTGCACCA
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Coding sequence (CDS) from alignment at P-littoralis_Contig709:73349..82025+

>mRNA_P-littoralis_Contig709.18.1 ID=mRNA_P-littoralis_Contig709.18.1|Name=mRNA_P-littoralis_Contig709.18.1|organism=Pylaiella littoralis U1_48|type=CDS|length=864bp|location=Sequence derived from alignment at P-littoralis_Contig709:73349..82025+ (Pylaiella littoralis U1_48)
ATGGGGAAACCAAGACCGGGGGCCGAGGCCGCGCAGCGTCTCCTGGAATC
CGGCACTAGGCAAGAATGGGACAGCGCTGCCCACAGCTACACCCGCATCG
TTGAGCGCTTGTCGCAGGAGAAGGGCAAGGGCGATCTGGTTGAGCTGGAC
CGCTGGTGGCGCGAGGACTTACCGAAGACCCTTCGCGCCAGAGGAGCAGG
CGGGGGCAAGCCCTTCCTCGTGAAAGACGAGCTCGTCGATGTCGTACGGT
GGAAGCTGTTGGTAGGGCAGATGCGGGCCACCCTCCTGCCGTTCGCGAAG
TCGACCAATCCCGCCACGGTGAAAGCCAAGAGCAGAGAGGCGTTCGAGCA
CCTCTCCGGGTACTATCCTCGTTCCTCGCCCTCGTCCCCGTCAGCACCGT
CATCGCCATCGTCATCGTTATGCCATGCCGCTACATCGGCGTCGATGCGA
GTGCCCGAAGAGACGGTGAAGCTGGCGGTGAAGACCCTGGAGAAGGACCT
CAAGGGGGTGGGGCCCGCGACGGCCTCGGCTGTGTTGGCGGCTCTGTGCG
GGGGGTGCCCCTTCCTCGCCGACGAGGTCATCGAAGCCGTCAAGGGCCTG
GGAAACCGCGACTACACCATCAAGACGTATCTCCAGGTTCACGACGCCCT
GGCCGAAAAAGCCAAGACACTAGGAACTCCTTGGGACGCGGAGCGTGTCC
GGAAGGCCCTGTGGTCCCGCGCGATGCACGCCCGCTTCGACCTCCCGCTG
CCGCTTCCACCACCACCACCACCACCACCAGCGGCGGCGGCCGCCGCCGC
CGCCGCAGGAAAATCCCTCCTCTCGCCAACAACTCCTCCTCCTCCTCCTG
CGTCGCCTGCACCA
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