prot_P-littoralis_Contig709.4.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig709.4.3
Unique Nameprot_P-littoralis_Contig709.4.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length161
Homology
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BLAST of mRNA_P-littoralis_Contig709.4.3 vs. uniprot
Match: D7FWE6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWE6_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 1.060e-6
Identity = 25/32 (78.12%), Postives = 27/32 (84.38%), Query Frame = 0 
Query:  130 GVLEERAKGDADNMELRDFRARLMSKGLDGWG 161
            GV E  A G A++MELRDFRARLMSKGLDGWG
Sbjct:   53 GVSESGAAGGAESMELRDFRARLMSKGLDGWG 84
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BLAST of mRNA_P-littoralis_Contig709.4.3 vs. uniprot
Match: A0A6H5JA69_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA69_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 4.340e-5
Identity = 24/32 (75.00%), Postives = 26/32 (81.25%), Query Frame = 0 
Query:  130 GVLEERAKGDADNMELRDFRARLMSKGLDGWG 161
            GV E  A   A++MELRDFRARLMSKGLDGWG
Sbjct:  103 GVSESGAAEGAESMELRDFRARLMSKGLDGWG 134
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig709.4.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FWE6_ECTSI1.060e-678.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JA69_9PHAE4.340e-575.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..129
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig709contigP-littoralis_Contig709:39097..43450 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig709.4.3mRNA_P-littoralis_Contig709.4.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig709 39095..43450 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig709.4.3 ID=prot_P-littoralis_Contig709.4.3|Name=mRNA_P-littoralis_Contig709.4.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=161bp
CFSSGGSGGRSSSGSQGASSTNDVFMTAGHRWRKDRRRSSFGVTILRAEA
APAPAPAGGGGGGGGGGEEGLPDAERDGASGDSDQTSPEGSVSSAGRNDE
PVGEESFTDDNGDDGDGDGGGDGDDDDDGGVLEERAKGDADNMELRDFRA
RLMSKGLDGWG
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