prot_P-littoralis_Contig707.14.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig707.14.1
Unique Nameprot_P-littoralis_Contig707.14.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length173
Homology
BLAST of mRNA_P-littoralis_Contig707.14.1 vs. uniprot
Match: D8LST0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LST0_ECTSI)

HSP 1 Score: 322 bits (824), Expect = 6.740e-111
Identity = 150/172 (87.21%), Postives = 163/172 (94.77%), Query Frame = 0
Query:    1 MATTLNRIINHKAKWHLIDARGQVVGRLAAQIAPIIRGKHKPTFCPNDDCGDIVVVVNANAVEFSGDKWKQKLYRWHTGFPGGLKERPAADQIVRKPEEILRRAVMGMLPKNGLRKRMVTKLLIYPGPSHPHDDQLPADSAQSLLERSDRTLTDRRPADIRQSQDTNYIEWP 172
            MATTLNRIINHKAKWHLIDA GQ+VGRLAAQIAPIIRGKHKPTFCPNDDCGD+VVVVNANAVEF+G+KW++K+YRWH+GFPGGLKERPA DQ+VRKPEEILRRAVMGMLPKN LRKRMVTKLLIYPGPSHPHDD+LP DSAQSLLE+SDR L DRRP DI++ QD NYIEWP
Sbjct:    1 MATTLNRIINHKAKWHLIDASGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKVYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVTKLLIYPGPSHPHDDRLPTDSAQSLLEKSDRKLIDRRPTDIKKYQDDNYIEWP 172          
BLAST of mRNA_P-littoralis_Contig707.14.1 vs. uniprot
Match: A0A835ZK23_9STRA (Ribosomal protein L13 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK23_9STRA)

HSP 1 Score: 186 bits (471), Expect = 1.800e-57
Identity = 82/127 (64.57%), Postives = 102/127 (80.31%), Query Frame = 0
Query:   10 NHKAKWHLIDARGQVVGRLAAQIAPIIRGKHKPTFCPNDDCGDIVVVVNANAVEFSGDKWKQKLYRWHTGFPGGLKERPAADQIVRKPEEILRRAVMGMLPKNGLRKRMVTKLLIYPGPSHPHDDQL 136
            +H+  WHL+DA+ Q+VGRLA QIAP++ GKHKPT+ PN  CGDIVVV+NA  V+F+G KW  K+YRWH+G+PGGLKER    Q+ R+PEEILRRAVMGMLPKN LR RM+ +L IY GP+HPH+  L
Sbjct:   11 SHRPMWHLVDAKDQIVGRLATQIAPLLVGKHKPTYSPNVACGDIVVVINAADVQFTGKKWTDKVYRWHSGYPGGLKERTPKQQLERRPEEILRRAVMGMLPKNKLRSRMILQLKIYEGPAHPHEGDL 137          
BLAST of mRNA_P-littoralis_Contig707.14.1 vs. uniprot
Match: A0A7S2R604_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R604_9STRA)

HSP 1 Score: 176 bits (445), Expect = 1.710e-53
Identity = 87/140 (62.14%), Postives = 103/140 (73.57%), Query Frame = 0
Query:    7 RIINHKAKWHLIDARGQVVGRLAAQIAPIIRGKHKPTFCPNDDCGDIVVVVNANAVEFSGDKWKQKLYRWHTGFPGGLKERPAADQIVRKPEEILRRAVMGMLPKNGLRKRMVTKLLIYPGPSHPHDDQLPADSAQSLLE 146
            RI    ++WHL+DAR QVVGRLA QI  I+RGKHKPT+ PN D GD VVV+NA+ V  +G KW+QK YRWH+G+PGGLK R A D   RKPEEILR AV GMLPKN LRKR + +L IY GP H  + +L A  A+SLLE
Sbjct:   13 RIRGTASRWHLVDAREQVVGRLAVQIGGILRGKHKPTYLPNADIGDTVVVINASEVCLTGSKWRQKQYRWHSGYPGGLKARSARDMAARKPEEILRHAVAGMLPKNKLRKRCLARLRIYAGPKHEFEAELGA-GAKSLLE 151          
BLAST of mRNA_P-littoralis_Contig707.14.1 vs. uniprot
Match: B8BX67_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BX67_THAPS)

HSP 1 Score: 173 bits (438), Expect = 1.400e-52
Identity = 79/124 (63.71%), Postives = 96/124 (77.42%), Query Frame = 0
Query:   15 WHLIDARGQVVGRLAAQIAPIIRGKHKPTFCPNDDCGDIVVVVNANAVEFSGDKWKQKLYRWHTGFPGGLKERPAADQIVRKPEEILRRAVMGMLPKNGLRKR-MVTKLLIYPGPSHPHDDQLP 137
            WHL+DA  Q VGRLA  IAPI++GKHKPT+ PN DCGD VV+VNA+ V  SG+KW  K+YRWHTG+PGGLKERPA D + RKPE ILR+A++GML +N LR+  M  +L IY G  HPH+ QLP
Sbjct:   12 WHLVDATSQTVGRLATTIAPILKGKHKPTYRPNGDCGDYVVIVNADKVHLSGNKWDDKIYRWHTGYPGGLKERPAKDMLERKPEFILRKAILGMLYRNNLRESYMEPRLKIYAGSEHPHEAQLP 135          
BLAST of mRNA_P-littoralis_Contig707.14.1 vs. uniprot
Match: F0WMW5_9STRA (50S ribosomal protein L13 putative n=2 Tax=Albugo TaxID=65356 RepID=F0WMW5_9STRA)

HSP 1 Score: 171 bits (434), Expect = 6.030e-52
Identity = 77/125 (61.60%), Postives = 96/125 (76.80%), Query Frame = 0
Query:   12 KAKWHLIDARGQVVGRLAAQIAPIIRGKHKPTFCPNDDCGDIVVVVNANAVEFSGDKWKQKLYRWHTGFPGGLKERPAADQIVRKPEEILRRAVMGMLPKNGLRKRMVTKLLIYPGPSHPHDDQL 136
            K  WH++DA+GQ+VGRLA+Q+API+ GKHKPT+ PN DCGD +VV+NA  + F+GDKW QKLYRWHTG PGGLKER A +   RKPEEILR+AV GMLPKN +RK  + KL I+    H   D++
Sbjct:   11 KVCWHVVDAKGQIVGRLASQLAPILCGKHKPTYAPNVDCGDHLVVINAKDLVFTGDKWNQKLYRWHTGHPGGLKERTAKEMFARKPEEILRKAVYGMLPKNKMRKLQIQKLKIFLDEEHDFQDKV 135          
BLAST of mRNA_P-littoralis_Contig707.14.1 vs. uniprot
Match: A0A448Z8K8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z8K8_9STRA)

HSP 1 Score: 172 bits (437), Expect = 6.990e-52
Identity = 80/131 (61.07%), Postives = 98/131 (74.81%), Query Frame = 0
Query:   15 WHLIDARGQVVGRLAAQIAPIIRGKHKPTFCPNDDCGDIVVVVNANAVEFSGDKWKQKLYRWHTGFPGGLKERPAADQIVRKPEEILRRAVMGMLPKNGLRKRMVT-KLLIYPGPSHPHDDQLPADSAQSL 144
            WHL+DA+ Q VGRLA QI+ I++GKHKPTF PN D GD VVV+NA  V+FSG KW  KLYRWH+G+PGGLKER A D + RKPEEIL++AV+GML +N LR + +  +L IY GP HPH  QLP  +   L
Sbjct:   12 WHLVDAKNQTVGRLAGQISQILKGKHKPTFRPNKDMGDHVVVINAEKVQFSGKKWNDKLYRWHSGYPGGLKERSARDMMARKPEEILKKAVLGMLKRNNLRHQSIEPRLRIYSGPDHPHTAQLPPGTTTPL 142          
BLAST of mRNA_P-littoralis_Contig707.14.1 vs. uniprot
Match: A0A7S2UNE7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UNE7_9STRA)

HSP 1 Score: 172 bits (437), Expect = 7.680e-52
Identity = 76/124 (61.29%), Postives = 97/124 (78.23%), Query Frame = 0
Query:   15 WHLIDARGQVVGRLAAQIAPIIRGKHKPTFCPNDDCGDIVVVVNANAVEFSGDKWKQKLYRWHTGFPGGLKERPAADQIVRKPEEILRRAVMGMLPKNGLRKRMVT-KLLIYPGPSHPHDDQLP 137
            WHL+DA+ Q VGRLA Q+API++GKHKPT+ P+ DCGDIVV++NA  V FSG KW  KLYRWHTGFPGGLK+R A + + RKPE+IL++A++GML +  LR + +  +L IY GP HPH  QLP
Sbjct:   20 WHLVDAQSQTVGRLATQLAPILKGKHKPTYKPHTDCGDIVVIINAEKVHFSGKKWNDKLYRWHTGFPGGLKQRTAKEMLQRKPEDILKKAILGMLSRTKLRHKYIEPRLKIYTGPIHPHSAQLP 143          
BLAST of mRNA_P-littoralis_Contig707.14.1 vs. uniprot
Match: A0A2D4BZ50_PYTIN (Mitochondrial/chloroplast ribosomal protein L13 n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BZ50_PYTIN)

HSP 1 Score: 171 bits (433), Expect = 8.550e-52
Identity = 77/125 (61.60%), Postives = 95/125 (76.00%), Query Frame = 0
Query:   12 KAKWHLIDARGQVVGRLAAQIAPIIRGKHKPTFCPNDDCGDIVVVVNANAVEFSGDKWKQKLYRWHTGFPGGLKERPAADQIVRKPEEILRRAVMGMLPKNGLRKRMVTKLLIYPGPSHPHDDQL 136
            K  WH++DA+GQV+GRLA+Q+API+RGKHKPT+ PN DCGD VVV+NA  +  +GDKW QKLYRWHTG PGGLK+R A +   RKPEE+LRRAV GMLPKN +RK    KL I+    H   +Q+
Sbjct:   11 KVMWHVVDAKGQVLGRLASQLAPILRGKHKPTYAPNVDCGDYVVVINAKDIVLTGDKWDQKLYRWHTGHPGGLKQRTAREMFERKPEEVLRRAVFGMLPKNKMRKLQDQKLKIFLDEEHDFKEQV 135          
BLAST of mRNA_P-littoralis_Contig707.14.1 vs. uniprot
Match: A0A7S4HN68_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HN68_9STRA)

HSP 1 Score: 170 bits (431), Expect = 4.860e-51
Identity = 77/123 (62.60%), Postives = 94/123 (76.42%), Query Frame = 0
Query:   15 WHLIDARGQVVGRLAAQIAPIIRGKHKPTFCPNDDCGDIVVVVNANAVEFSGDKWKQKLYRWHTGFPGGLKERPAADQIVRKPEEILRRAVMGMLPKNGLRKRMVT-KLLIYPGPSHPHDDQL 136
            WHLIDA  Q VGRLAA +API+RGKHKPT+ PN DCGD VV+VNA  V FSG+KWK KLYRWHTG+PGGLKERPA   + RKPE +L++A++GM+ K  L+   +  +L +Y GP HPH  QL
Sbjct:   12 WHLIDAADQTVGRLAATVAPILRGKHKPTYRPNADCGDFVVIVNAEKVHFSGNKWKDKLYRWHTGYPGGLKERPADMMLERKPESVLQKAILGMVHKGNLKHGYIEPRLKVYAGPYHPHKSQL 134          
BLAST of mRNA_P-littoralis_Contig707.14.1 vs. uniprot
Match: A0A7S3Q0X2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0X2_9STRA)

HSP 1 Score: 170 bits (430), Expect = 6.090e-51
Identity = 74/124 (59.68%), Postives = 97/124 (78.23%), Query Frame = 0
Query:   15 WHLIDARGQVVGRLAAQIAPIIRGKHKPTFCPNDDCGDIVVVVNANAVEFSGDKWKQKLYRWHTGFPGGLKERPAADQIVRKPEEILRRAVMGMLPKNGLRKRMVT-KLLIYPGPSHPHDDQLP 137
            WH++DA  Q VGRLAA IAP+++GKHKPT+ PN DCGD VV+VNA  V F+G KW  KLYRWHTGFPGGLK+R A + + R+PE+IL++A++GM+ +N LR + +  +L IY GP+HPH  QLP
Sbjct:   12 WHIVDASTQTVGRLAANIAPLLKGKHKPTYRPNGDCGDYVVIVNAEKVNFTGKKWNDKLYRWHTGFPGGLKQRRAKEMLERQPEKILKKAILGMIHRNNLRHKYIEPRLKIYSGPNHPHTGQLP 135          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig707.14.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LST0_ECTSI6.740e-11187.21Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZK23_9STRA1.800e-5764.57Ribosomal protein L13 n=1 Tax=Tribonema minus TaxI... [more]
A0A7S2R604_9STRA1.710e-5362.14Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
B8BX67_THAPS1.400e-5263.71Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
F0WMW5_9STRA6.030e-5261.6050S ribosomal protein L13 putative n=2 Tax=Albugo ... [more]
A0A448Z8K8_9STRA6.990e-5261.07Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S2UNE7_9STRA7.680e-5261.29Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A2D4BZ50_PYTIN8.550e-5261.60Mitochondrial/chloroplast ribosomal protein L13 n=... [more]
A0A7S4HN68_9STRA4.860e-5162.60Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S3Q0X2_9STRA6.090e-5159.68Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036899Ribosomal protein L13 superfamilyGENE3D3.90.1180.10Ribosomal protein L13coord: 1..166
e-value: 2.9E-58
score: 198.4
IPR036899Ribosomal protein L13 superfamilySUPERFAMILY52161Ribosomal protein L13coord: 2..137
IPR005822Ribosomal protein L13PFAMPF00572Ribosomal_L13coord: 14..131
e-value: 3.3E-47
score: 159.5
IPR005822Ribosomal protein L13PANTHERPTHR11545RIBOSOMAL PROTEIN L13coord: 9..141
IPR005822Ribosomal protein L13HAMAPMF_01366Ribosomal_L13coord: 15..153
score: 28.267916
IPR005822Ribosomal protein L13CDDcd00392Ribosomal_L13coord: 15..128
e-value: 2.80199E-49
score: 153.044
IPR005823Ribosomal protein L13, bacterial-typeTIGRFAMTIGR01066TIGR01066coord: 11..138
e-value: 6.8E-50
score: 166.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..172
NoneNo IPR availablePANTHERPTHR11545:SF239S RIBOSOMAL PROTEIN L13, MITOCHONDRIALcoord: 9..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig707contigP-littoralis_Contig707:64599..70854 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig707.14.1mRNA_P-littoralis_Contig707.14.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig707 64567..72066 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig707.14.1 ID=prot_P-littoralis_Contig707.14.1|Name=mRNA_P-littoralis_Contig707.14.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=173bp
MATTLNRIINHKAKWHLIDARGQVVGRLAAQIAPIIRGKHKPTFCPNDDC
GDIVVVVNANAVEFSGDKWKQKLYRWHTGFPGGLKERPAADQIVRKPEEI
LRRAVMGMLPKNGLRKRMVTKLLIYPGPSHPHDDQLPADSAQSLLERSDR
TLTDRRPADIRQSQDTNYIEWP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036899Ribosomal_L13_sf
IPR005822Ribosomal_L13
IPR005823Ribosomal_L13_bac-type