prot_P-littoralis_Contig118.32.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig118.32.1
Unique Nameprot_P-littoralis_Contig118.32.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length287
Homology
BLAST of mRNA_P-littoralis_Contig118.32.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE)

HSP 1 Score: 345 bits (886), Expect = 1.590e-115
Identity = 177/230 (76.96%), Postives = 197/230 (85.65%), Query Frame = 0
Query:   53 IVVEAALAIPPGQVRIPKGALGPICERHGVSPQYPSRLSKSAKDQINANQEVDLSSKGRKGRPSLLTPSKVAALKKVNSQNRSFTLRQVSDQLTDLGLEFGKDTVRRWFKELGAAKKARRIKPSLSDAQKRRRIDYICDQVDETTGEYLDQYNVVHLDESWFYLVKEKEKVRVFPNEEVLGAPRVQHKSHLPKIMIIVANARPDPAHDFDGKIGIWRICVIKTAQRSSKR 282
            + VE A+ I PG  RIPKG L PICER+GV  +YPS L K  K QI+  QE+DLS++ R GRPSLLTPSK+AALK VNSQNRS TLRQVSDQLTDLGLEFGKDTVRRWF +LGAAKKA RIKPSLSDAQKR R+D+I D+VDE  GEYLDQ NVVHLDESWFYL++EKEKVRVF  E+V G PRV H+SHLPKIM+IVANARPDPAHDFDGKIGIWRICVI+TAQRSSK+
Sbjct:    1 MAVEIAMGIQPGFSRIPKGVLDPICERYGVGKKYPSELWKRVKTQIDNTQELDLSNEERSGRPSLLTPSKIAALKTVNSQNRSSTLRQVSDQLTDLGLEFGKDTVRRWFSKLGAAKKAGRIKPSLSDAQKRHRMDFISDRVDEPIGEYLDQGNVVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKK 230          
BLAST of mRNA_P-littoralis_Contig118.32.1 vs. uniprot
Match: A0A8J2WWN0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WWN0_9STRA)

HSP 1 Score: 105 bits (261), Expect = 8.140e-22
Identity = 84/273 (30.77%), Postives = 139/273 (50.92%), Query Frame = 0
Query:   31 QTMDTPPHRPKGG---ELSVGRRYAIVVEAALAIPPGQVRIPKGALGPICER---HGVSPQYPSRLSKSAK-------DQINANQEVDLSSKGRKGRPSLLTPSKVAALKKVNSQ-----NRSFTLRQVSDQLTDLGLEFGKDTVRRWFKELGAAKKARRIKPSLSDAQKRRRIDYICDQVDETTGEYLDQYNVVHLDESWFYLVKEKEKVRVFPNEE---VLGAPR-VQHKSHLPKIMIIVANARPDPAHDFDGKIGIWRICVIKTAQRSSK 281
            +T ++P  + + G   +L +  R A V E   A+ PG   +P GA   + E+   + +S Q  +R +++ +       D + + + +     GR    + LT      + ++N +     +    L +V  +L DL     ++++RRW K LGA K  + IKP L    K +R+ +  D++D   G   D  + VH+DE WF+ + +    RVFP+      L  PR + HKS  PK+M +VA ARP P ++FDGKIGIW   +++ A+RS K
Sbjct:   33 KTFESPLEKRRPGSHSDLDLEHRQAAVAEYRAALGPGGT-LPPGAKARLLEKFKPYNISYQSITRWNRTQRKAEAEGADPVKSRRSLASKRIGRAATNTKLTVPIAETILEINWKYWGKLSTKKLLGKVVKELPDLD-GTSEESMRRWCKALGAKKHRQYIKPLLRLRHKVQRLKWALDEIDGN-GMLSDHKDTVHVDEKWFFQMDDGAVCRVFPDAHGNYTLPPPRRLYHKSRTPKLMFLVAVARPRPEYNFDGKIGIWHFAIVRKAKRSHK 302          
BLAST of mRNA_P-littoralis_Contig118.32.1 vs. uniprot
Match: A0A6H5KX98_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX98_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 3.580e-18
Identity = 47/61 (77.05%), Postives = 47/61 (77.05%), Query Frame = 0
Query:   30 MQTMDTPP----HRPKGGELSVGRRYAIVVEAALAIPPGQVRIPKGALGPI-CERHGVSPQ 85
            MQTMDTPP    HRPKGGELSVGRR AIVVEAALAIPPGQVRIPKG  GP    RH   PQ
Sbjct:    1 MQTMDTPPSTPPHRPKGGELSVGRRIAIVVEAALAIPPGQVRIPKGCAGPTDTNRHFFCPQ 61          
BLAST of mRNA_P-littoralis_Contig118.32.1 vs. uniprot
Match: A0A6H5KAR4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAR4_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 2.070e-17
Identity = 43/50 (86.00%), Postives = 45/50 (90.00%), Query Frame = 0
Query:   30 MQTMDTPP----HRPKGGELSVGRRYAIVVEAALAIPPGQVRIPKGALGP 75
            MQTMDTPP    HRPKGGELSVGRR AIVVEAALAIPPGQV+IP+GALGP
Sbjct:    1 MQTMDTPPSTPPHRPKGGELSVGRRIAIVVEAALAIPPGQVQIPRGALGP 50          
BLAST of mRNA_P-littoralis_Contig118.32.1 vs. uniprot
Match: A0A6A3GHY1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GHY1_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 5.250e-17
Identity = 86/258 (33.33%), Postives = 124/258 (48.06%), Query Frame = 0
Query:   37 PHRPKGGELSVGRRYAIVVEAALAIPPGQVRIPKGALGPICERHGVSPQYPSRLSKSAKDQINANQE-VDLSSKGRKGRPSLLTPSKVAALKKVNSQNRSFTLRQVSDQLTDLGLEFGKDTVRRWFKELGAAK---KARRIKPSLSDAQKRRRIDYICDQVDETTGEYLDQYNVVHLDESWFYLVKEKEKVRVFPNEEVLGAPRVQHKSHLPKIMIIVANARP--DPAHD--FDGKIGIWRICVIKTAQRSSKRRKRG 286
            P RP+   LS  +R  +V  A L    G V +P+GA+  + E  GV  +  SR+ + A    + N      S   R GRP      ++  L+ V+ Q RS T R  +         F   T    F+EL   K        KP+L++  K +RI +  D VD  T  + +  +VVH+DE  FYL K K +  + P+E      R++ K H+PK+M++VA ARP  DP     FDGK+G W     + A+RSS  R  G
Sbjct:   14 PPRPRASNLSDDQRVRVVA-ALLHEATGGV-VPRGAVRAVAEAFGVHARTVSRVWRRAVSNFDRNGSYASPSQMHRAGRPRADRARELERLRGVDPQQRS-TTRSAAQAC------FLPPTT--LFRELRLGKLCVATSVAKPTLTEENKMKRISFSLDHVDPMTHLFDEMEDVVHVDEKLFYLSKVKRRCVLLPDEPK-PVIRLKSKRHIPKVMVLVAVARPRHDPVTGEFFDGKLGTWAFLKHEPAERSSCNRPAG 259          
BLAST of mRNA_P-littoralis_Contig118.32.1 vs. uniprot
Match: UPI000539F855 (uncharacterized protein LOC104753393 n=4 Tax=Camelina sativa TaxID=90675 RepID=UPI000539F855)

HSP 1 Score: 88.2 bits (217), Expect = 3.160e-16
Identity = 69/208 (33.17%), Postives = 110/208 (52.88%), Query Frame = 0
Query:   89 RLSKSAKDQINANQEVDLSSK--GRKGRPSLLTPSKVAALKKVNSQNRSFTLRQVSDQLTDLGLEFGKDTVRRWFKELGAAKKARRIKPSLSDAQKRRRIDYICDQVDETT----GEYLDQYNVVHLDESWFYLVKEKEKVRVFPNEEVLGAPRVQHKSHLPKIMIIVANARP----DPAHDFDGKIGIWRICVIKTAQRSSKRRKRG 286
            R+ K AKD  N  +EV++S K  GR GR  +     +  ++++    R+ TLR +S     +GL   + T+ R  KE    +    IKPSL D   + R+ +    +++ T     +++D YN+VH+DE WFY+ K+ EK  + P EEV      Q K+++ K+M + A ARP    +    F GKIG++    ++ A+R SK R  G
Sbjct:   60 RIWKQAKDTSNG-EEVNVSHKKSGRCGRKRITLD--LDQVQEIPFHKRT-TLRSLS-----MGLGIAQSTLHRHVKEGTIRRHTNAIKPSLKDENMKARLKFCVSMLEKDTLIHGPKFVDMYNIVHIDEKWFYMTKKTEKYYLLPEEEVPHRT-CQSKNYIGKVMFLAAMARPRFDEEGNETFSGKIGVFPFVTMEPAKRRSKNRDAG 257          
BLAST of mRNA_P-littoralis_Contig118.32.1 vs. uniprot
Match: UPI0019D69F99 (uncharacterized protein LOC120703634 n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D69F99)

HSP 1 Score: 87.0 bits (214), Expect = 1.170e-15
Identity = 73/242 (30.17%), Postives = 126/242 (52.07%), Query Frame = 0
Query:   55 VEAALAIPPGQVRIPKGALGPICERHGVSPQYPSRLSKSAKDQINANQEVDLSS--KGRKGRPSLLTPSKVAALKKVNSQNRSFTLRQVSDQLTDLGLEFGKDTVRRWFKELGAAKKARRIKPSLSDAQKRRRIDYICDQVDETT---GEYLDQYNVVHLDESWFYLVKEKEKVRVFPNEEVLGAPRV-QHKSHLPKIMIIVANARP---DPAHDFDGKIGIWRICVIKTAQRSSKRRKRGE 287
            V  AL +     R+ K     + E+ GV  +   R+ K  K+Q+  N  V + +  KGR GRP++  P  +  L+ +  Q R  TL  VS +L        K  + R+ K+      +  +KP L++A K+ R+ +  D +D++     ++ D +++V +DE WFY+ ++ E+  + P+E+     R+ ++K+++P+IM +   ARP   D    FDGKIG + +  I+ A R S  R RGE
Sbjct:   46 VYQALLMRSKNGRLGKHDTAIVSEQFGVKIRTVQRIWKRGKNQLAQNIPVKVPNLKKGRSGRPAI--PIDLENLRNIPLQQR-MTLEDVSSRLG-----ISKTKIHRYLKQGLLRHHSSSVKPYLTEANKKTRLKWCIDMIDQSLLDDPKFKDLFDIVFIDEKWFYIYQKSERYYLLPDED--EPHRICKNKNYIPRIMFLCVVARPRFRDGVCVFDGKIGCFPLVTIEHAIRDSPYRLRGE 277          
BLAST of mRNA_P-littoralis_Contig118.32.1 vs. uniprot
Match: UPI000CD8BE7B (uncharacterized protein LOC111908693 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD8BE7B)

HSP 1 Score: 82.8 bits (203), Expect = 2.680e-14
Identity = 69/233 (29.61%), Postives = 111/233 (47.64%), Query Frame = 0
Query:   67 RIPKGALGPICERHGVSPQYPSRLSKSAKDQINANQEVDLSSKGRKGRPSLLTPSKVAALKKVN---SQNRSFTLRQVSD-QLTDLGLEFGKDTVRRWFKELGAAKKARRIKPSLSDAQKRRRIDYICDQVDETT-----GEYLDQYNVVHLDESWFYLVKEKEKVRVFPNEEVLGAPRVQHKSHLPKIMIIVANARP--DPAHD--FDGKIGIWRICVIKTAQRSSKRRKRG 286
            R+ KG+   +     VS +  SR+ +  K+Q++    VDLS          L  S V   K++    +Q     LR+ S+ +     L   K T+ RW KE         IKP+L+   KR R+++   ++  ++       + D +NVVH+DE WFY+ K  ++  + P E+       + K  + K+M + A ARP  D + +  F GKIGI+    +  A+RSSK R  G
Sbjct:   33 RLKKGSASEVASLFSVSKRTVSRIWRQGKNQVDQGLPVDLS----------LNMSMVVGRKRIQINLNQVSEIPLRRRSNIRSLAKSLNVSKSTMHRWIKEGVLRPHTNAIKPTLTHENKRARLEFCLSKITLSSLFSPLPTFYDMFNVVHIDEKWFYMSKPSKRYYLVPGEDE-PLRTCKSKKFITKVMFLAAVARPRFDSSGNEVFSGKIGIYPFTTLVPAKRSSKNRVAG 254          
BLAST of mRNA_P-littoralis_Contig118.32.1 vs. uniprot
Match: UPI000B8AB67D (uncharacterized protein LOC110800636 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8AB67D)

HSP 1 Score: 82.4 bits (202), Expect = 5.410e-14
Identity = 76/258 (29.46%), Postives = 127/258 (49.22%), Query Frame = 0
Query:   38 HRPKGGELSVGRRYAIVVEAALAIPPGQVRIPKGALGPICERHGVSPQYPSRLSKSAKDQINANQ-EVDLSSKGRKGRPSLLTPSKVAALKKVNSQNRSFTLRQVSDQLTDLGLEFGKDTVRRWFKELGAAKKARRIKPSLSDAQKRRRIDYICDQVDETT----GEYLDQYNVVHLDESWFYLVKEKEKVRVFPNEEVLGAPRVQHKSHLPKIMIIVANARPDPAHD----FDGKIGIWRICVIKTAQRSSKRRKRG 286
            H  K  ELS  +R A++V   + +    + +P G    +   +GV      R+   AKDQ+  +  +V    KGR GR +     +V  +K V  ++R+ TLR  +     + L+    T+ R  K+         IKPS++ A K +RI +I  ++   T     ++   YNV+H+DE WFY+ ++ ++  +   EE       Q+ ++L K+M +   ARP   ++    FDGK+GI+       A+RSSK R+RG
Sbjct:  107 HGKKTFELSDNQR-AVMVAKLMLLANKDMTLPWGVAKKLANEYGVDKSTVHRIWGRAKDQMQQDVIDVRRQKKGRVGRKAREFTEEV--IKNVPKRHRT-TLRSFA-----IALQTSPSTIYRLLKKGILRPHTNSIKPSVTAAHKTQRIQWILSKIIPRTVHSGPKFSSLYNVIHIDEKWFYMSRKTQRYYLLAGEEE-PYRATQNSNYLVKVMFLCGIARPIIGYNGEVLFDGKLGIFPFTEEVPAKRSSKNRERG 354          
BLAST of mRNA_P-littoralis_Contig118.32.1 vs. uniprot
Match: UPI000CD873B3 (uncharacterized protein LOC111883545 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD873B3)

HSP 1 Score: 82.0 bits (201), Expect = 5.600e-14
Identity = 78/254 (30.71%), Postives = 122/254 (48.03%), Query Frame = 0
Query:   46 SVGRRYAIVVEAALAIPPGQVRIPKGALGPICERHGVSPQYPSRLSKSAKDQINANQEVDLSSKGRKGRPSLLTPSKVAALKKVN---SQNRSFTLRQVSD--QLTDLGLEFGKDTVRRWFKELGAAKKARRIKPSLSDAQKRRRIDYICDQVDETTGEYL----DQYNVVHLDESWFYLVKEKEKVRVFPNEEVLGAPRVQHKSHLPKIMIIVANARP--DPAHD--FDGKIGIWRICVIKTAQRSSKRRKRG 286
            +V +R+AI      A   G+++  +GA+  +  +  VS +  SR+   AK QIN    V LSS            +KV   K+V    +Q     LR+ S+   L +L L   K T+ R  KE         IKP+L+   KR R+++   ++  +    +    D +NV+H+DE WFY+ K   +  + P E+       Q K  + K+M + A ARP  D + +  F GKIGI+    ++ A+RSSK R  G
Sbjct:   14 TVEQRHAIYEALLQASFSGELQ--RGAISDVASQFSVSNRTVSRIWHQAKFQINHGLPVVLSS----------NMAKVVGRKRVQVDFNQVLDIPLRRRSNIRSLANL-LNVSKSTMHRRIKEGALRPHTNAIKPTLTHENKRARLEFCLSKISRSLSSNIPTFHDMFNVIHIDEKWFYMSKPSRRYYLVPGEDE-PLRTCQSKKFITKVMFLAAVARPRFDASGNEVFSGKIGIYPFTRLEPAKRSSKNRVAG 253          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig118.32.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIM0_9PHAE1.590e-11576.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8J2WWN0_9STRA8.140e-2230.77Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6H5KX98_9PHAE3.580e-1877.05Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAR4_9PHAE2.070e-1786.00Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6A3GHY1_9STRA5.250e-1733.33Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
UPI000539F8553.160e-1633.17uncharacterized protein LOC104753393 n=4 Tax=Camel... [more]
UPI0019D69F991.170e-1530.17uncharacterized protein LOC120703634 n=1 Tax=Panic... [more]
UPI000CD8BE7B2.680e-1429.61uncharacterized protein LOC111908693 n=1 Tax=Lactu... [more]
UPI000B8AB67D5.410e-1429.46uncharacterized protein LOC110800636 n=1 Tax=Spina... [more]
UPI000CD873B35.600e-1430.71uncharacterized protein LOC111883545 n=1 Tax=Lactu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 166..280
e-value: 3.7E-8
score: 35.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..106
NoneNo IPR availablePANTHERPTHR47169OS01G0541250 PROTEINcoord: 154..286

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig118contigP-littoralis_Contig118:142978..143838 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig118.32.1mRNA_P-littoralis_Contig118.32.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig118 142978..159705 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig118.32.1 ID=prot_P-littoralis_Contig118.32.1|Name=mRNA_P-littoralis_Contig118.32.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=287bp
MPILACFENFLRIFCRIREISRDYHPPHTMQTMDTPPHRPKGGELSVGRR
YAIVVEAALAIPPGQVRIPKGALGPICERHGVSPQYPSRLSKSAKDQINA
NQEVDLSSKGRKGRPSLLTPSKVAALKKVNSQNRSFTLRQVSDQLTDLGL
EFGKDTVRRWFKELGAAKKARRIKPSLSDAQKRRRIDYICDQVDETTGEY
LDQYNVVHLDESWFYLVKEKEKVRVFPNEEVLGAPRVQHKSHLPKIMIIV
ANARPDPAHDFDGKIGIWRICVIKTAQRSSKRRKRGE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf