mRNA_P-littoralis_Contig707.11.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig707.11.1 vs. uniprot
Match: A0A6H5KRU1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRU1_9PHAE) HSP 1 Score: 259 bits (663), Expect = 1.860e-83 Identity = 118/152 (77.63%), Postives = 133/152 (87.50%), Query Frame = 3
Query: 285 KGKEEYTSVVFEAICDHAGRVIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGMSSWHTGGWLIVDGGYHRVPLLIRPYKTYASVEQQEWNKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNM 740
KGKE YT+VVFEAICDHAGR++ASTKGYPGAENDKTVV+RDLSV R++ EEPW SYKYE+Y G + HTGGWLI +GGYHRVPLLI P+K YA+V +Q+W+KR ESVRKDIEC FGRLKGRFRLFKTGILF R KID+AWFTACIIHNM
Sbjct: 72 KGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIAEGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNM 223
BLAST of mRNA_P-littoralis_Contig707.11.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE) HSP 1 Score: 261 bits (667), Expect = 2.870e-82 Identity = 118/152 (77.63%), Postives = 137/152 (90.13%), Query Frame = 3
Query: 285 KGKEEYTSVVFEAICDHAGRVIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGMSSWHTGGWLIVDGGYHRVPLLIRPYKTYASVEQQEWNKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNM 740
KGKE YT++V+EA CDH+GR+++STKG+PGAENDKTVVKRDLSV R++ EEPWASYK+ L+ L+G ++ HTGGWLIVDGGYHRVP LI P+K YAS QQEW+KRFES+RKDIEC FGRLKGRFRLFKTGILF +REKIDNAWFTACIIHNM
Sbjct: 206 KGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWASYKFVLFDLEGNTTEHTGGWLIVDGGYHRVPSLICPFKEYASEAQQEWSKRFESIRKDIECLFGRLKGRFRLFKTGILFGTREKIDNAWFTACIIHNM 357
BLAST of mRNA_P-littoralis_Contig707.11.1 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE) HSP 1 Score: 261 bits (667), Expect = 5.760e-81 Identity = 119/152 (78.29%), Postives = 133/152 (87.50%), Query Frame = 3
Query: 285 KGKEEYTSVVFEAICDHAGRVIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGMSSWHTGGWLIVDGGYHRVPLLIRPYKTYASVEQQEWNKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNM 740
KGKE YT+VVFEAICDHAGR++ASTKGYPGAENDKTVV+RDLSV R++ EEPW SYKYE+Y G + HTGGWLI DGGYHRVPLLI P+K YA+V +Q+W+KR ESVRKDIEC FGRLKGRFRLFKTGILF R KID+AWFTACIIHNM
Sbjct: 304 KGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNM 455
BLAST of mRNA_P-littoralis_Contig707.11.1 vs. uniprot
Match: A0A6H5K604_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K604_9PHAE) HSP 1 Score: 221 bits (562), Expect = 1.120e-68 Identity = 94/151 (62.25%), Postives = 123/151 (81.46%), Query Frame = 3
Query: 288 GKEEYTSVVFEAICDHAGRVIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGMSSWHTGGWLIVDGGYHRVPLLIRPYKTYASVEQQEWNKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNM 740
GKE Y +VV EA CDH GR+IA+TK YPG+ENDKT+++RD S+ RI+ EEPW+S KY+LY DG + + G WL+VDGGY ++PLLI P K +A+VE+ +W++R ES+RKDIEC +GR+KGRFRLFK GIL+ +R+ IDN WFTACI+HNM
Sbjct: 73 GKEGYPTVVVEATCDHTGRIIAATKSYPGSENDKTIIQRDKSIWRIRDEEPWSSLKYKLYNADGSETEYKGAWLVVDGGYQKIPLLIPPIKHHATVEEHDWSRRLESMRKDIECCYGRVKGRFRLFKAGILYKTRDSIDNPWFTACILHNM 223
BLAST of mRNA_P-littoralis_Contig707.11.1 vs. uniprot
Match: A0A6H5JY35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY35_9PHAE) HSP 1 Score: 215 bits (548), Expect = 1.140e-66 Identity = 105/152 (69.08%), Postives = 117/152 (76.97%), Query Frame = 3
Query: 285 KGKEEYTSVVFEAICDHAGRVIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGMSSWHTGGWLIVDGGYHRVPLLIRPYKTYASVEQQEWNKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNM 740
KGKE YT+VVFEAICDHAGR++ASTKGYPGAENDKTVV YKYE+Y G + HTGGWLI DGGYHRVPLLI P+K YA+V +Q+W+KR ESVRKD+EC FGRLKGRFRLFKTGILF R KID+A FTACIIH M
Sbjct: 99 KGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVV----------------IYKYEMYDETGDVTKHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDMECLFGRLKGRFRLFKTGILFGDRTKIDDARFTACIIHTM 234
BLAST of mRNA_P-littoralis_Contig707.11.1 vs. uniprot
Match: A0A6H5JU81_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU81_9PHAE) HSP 1 Score: 210 bits (534), Expect = 1.030e-63 Identity = 94/151 (62.25%), Postives = 119/151 (78.81%), Query Frame = 3
Query: 288 GKEEYTSVVFEAICDHAGRVIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGMSSWHTGGWLIVDGGYHRVPLLIRPYKTYASVEQQEWNKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNM 740
GKE YTS+V E CDH+GR+IA+TK YPGAENDKTV+ R + RI+ EEPW SYK++LY DG + TG W+IVDGGY ++PLLI P KT+ +VE+ W++R ES+RKDIEC FGR+KG +RLF ILF++R K+DNAWFTACI+HNM
Sbjct: 84 GKEGYTSLVVECTCDHSGRIIAATKTYPGAENDKTVIARGKFIWRIRDEEPWKSYKFKLYNADGTETECTGAWIIVDGGYPKIPLLIPPIKTHNTVEEHGWSRRLESMRKDIECCFGRVKGLWRLFGGDILFSTRPKVDNAWFTACILHNM 234
BLAST of mRNA_P-littoralis_Contig707.11.1 vs. uniprot
Match: A0A6H5KVL5_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVL5_9PHAE) HSP 1 Score: 184 bits (467), Expect = 7.990e-54 Identity = 93/189 (49.21%), Postives = 121/189 (64.02%), Query Frame = 3
Query: 270 GNEYPK----GKEEYTSVVFEAICDHAGRVIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGMSSWHTGGWLIVDGGYHR----------------------------VPLLIRPYKTYASVEQQEWNKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNM 740
G+E+ K GKE YTS+V E CDH+GR+IA+TK YPGAENDKTV+ RD S+ RI+ EEPW SY +T W+IVDGGY + +PLLI P KT+ +VE+ +W++R ES+RKDIEC FGR+KGR+RLF +LF++R+K+DNAWFTACI+HNM
Sbjct: 52 GDEFKKNTHTGKEGYTSLVVECTCDHSGRIIAATKTYPGAENDKTVIARDKSIWRIRDEEPWKSY-------------YTRAWIIVDGGYPKSLETDHVVSTQVRIKPTPDSHFRSAVSHIPLLIPPIKTHNTVEEHDWSRRLESMRKDIECCFGRVKGRWRLFGGDMLFSTRQKVDNAWFTACILHNM 227
BLAST of mRNA_P-littoralis_Contig707.11.1 vs. uniprot
Match: A0A6H5K7N8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7N8_9PHAE) HSP 1 Score: 187 bits (476), Expect = 2.180e-53 Identity = 89/151 (58.94%), Postives = 113/151 (74.83%), Query Frame = 3
Query: 288 GKEEYTSVVFEAICDHAGRVIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGMSSWHTGGWLIVDGGYHRVPLLIRPYKTYASVEQQEWNKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNM 740
GKE YTS+V E CDH+GR+IA+TK PGAENDKTV+ RD S+ RI+ EEPW SY +T W+IVDGGY ++PLLI P KT+ +VE+ +W++R ES+RKDIEC FGR+KGR+RLF ILF++R+K DNA FTACI+HNM
Sbjct: 149 GKEGYTSLVVECACDHSGRIIAATKTCPGAENDKTVIARDKSIWRIRDEEPWKSY-------------YTRAWIIVDGGYPKIPLLIPPIKTHNTVEEHDWSRRLESMRKDIECCFGRVKGRWRLFGGDILFSTRQKGDNACFTACILHNM 286
BLAST of mRNA_P-littoralis_Contig707.11.1 vs. uniprot
Match: A0A6H5K4F4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4F4_9PHAE) HSP 1 Score: 182 bits (463), Expect = 5.240e-53 Identity = 79/139 (56.83%), Postives = 107/139 (76.98%), Query Frame = 3
Query: 288 GKEEYTSVVFEAICDHAGRVIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGMSSWHTGGWLIVDGGYHRVPLLIRPYKTYASVEQQEWNKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKID 704
GKE YTS+V E CDH+GR+IA+TK YPGAENDK V+ RD S+ R++ E+PW SYK++LY DG + +TG W+IVDGGY ++PLLI P KT+ +VE+ W++R ES+RKDIEC FGR+KGR+ LF I FN ++++
Sbjct: 102 GKEGYTSLVVECTCDHSGRIIAATKTYPGAENDKKVIARDKSIWRVRDEDPWKSYKFKLYNADGTETEYTGAWIIVDGGYPKIPLLIPPIKTHNTVEEHNWSRRLESMRKDIECCFGRVKGRWMLFSGDIFFNRLDEME 240
BLAST of mRNA_P-littoralis_Contig707.11.1 vs. uniprot
Match: D7FV01_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV01_ECTSI) HSP 1 Score: 178 bits (452), Expect = 1.590e-51 Identity = 86/142 (60.56%), Postives = 105/142 (73.94%), Query Frame = 3
Query: 321 AICDHAGRVIA--STKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGMSSWHTGGWLIVDGGYHRVPLLIRPYKTYASVEQQEWNKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNM 740
A+ D AGR K YPGAENDKT++ RD SV RI+ EEPW S KY+L DG + +TG WLIVDGGY ++PLL+ P KT+ S+E+ ++R ESVRKDIEC FGR+KGR+RLF+ I F SREKIDNAW TACI+HNM
Sbjct: 78 AVRDVAGRRCPPLELKCYPGAENDKTIISRDKSVWRIRDEEPWKSMKYKLRNADGTETEYTGAWLIVDGGYPKIPLLMPPIKTHNSIERHSCSRRMESVRKDIECCFGRVKGRWRLFRGNIPFGSREKIDNAWLTACILHNM 219 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig707.11.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig707.11.1 >prot_P-littoralis_Contig707.11.1 ID=prot_P-littoralis_Contig707.11.1|Name=mRNA_P-littoralis_Contig707.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=137bp MSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVback to top mRNA from alignment at P-littoralis_Contig707:59056..60621- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig707.11.1 ID=mRNA_P-littoralis_Contig707.11.1|Name=mRNA_P-littoralis_Contig707.11.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1566bp|location=Sequence derived from alignment at P-littoralis_Contig707:59056..60621- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig707:59056..60621- >mRNA_P-littoralis_Contig707.11.1 ID=mRNA_P-littoralis_Contig707.11.1|Name=mRNA_P-littoralis_Contig707.11.1|organism=Pylaiella littoralis U1_48|type=CDS|length=411bp|location=Sequence derived from alignment at P-littoralis_Contig707:59056..60621- (Pylaiella littoralis U1_48)back to top |