prot_P-littoralis_Contig705.18.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig705.18.1
Unique Nameprot_P-littoralis_Contig705.18.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length273
Homology
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BLAST of mRNA_P-littoralis_Contig705.18.1 vs. uniprot
Match: A0A6H5KJG0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJG0_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 1.370e-49
Identity = 125/195 (64.10%), Postives = 141/195 (72.31%), Query Frame = 0 
Query:   89 AASYDACFRGLLRSGLVAGLALLDAVGGHPLYENRIDERLLPRHRPXXXXXXXXXXXXXXXXXXXXXXXXXRQRDRPKDYRCCC--------DGLVSPSEGRQLVAAVKGLTDD--GLCRREA---LTCMGMPFRVFGGTPLGIYAVGVGRRTGLIARTLPLVGLLVVFYRRPHMPQQVVPCVENFVDRFWTDVQ 270
            +ASYDA F+GL+ SG +AGLALLDA  G PLYENR+D+RL    RP XXXXXXXXXXXXXXXXXXXXXX   + D  +              DGLVS SEG++LVAAVK LTDD   +CR++    LTCMG+PFRVFGGTPLGIYAVG GRR GL+ R LP VG LVV YRRPH+PQQVV  VE FVD FW   Q
Sbjct:   83 SASYDALFQGLVGSGCIAGLALLDASRGRPLYENRLDDRL---PRPPXXXXXXXXXXXXXXXXXXXXXXEDNKNDGKEVVGARGGGEGPGQRDGLVSSSEGQRLVAAVKSLTDDDDAICRKQEEQPLTCMGVPFRVFGGTPLGIYAVGPGRRVGLVVRALPRVGFLVVVYRRPHLPQQVVGEVEKFVDDFWAGTQ 274
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig705.18.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KJG0_9PHAE1.370e-4964.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..160
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig705contigP-littoralis_Contig705:115159..118309 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig705.18.1mRNA_P-littoralis_Contig705.18.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig705 115159..118310 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig705.18.1 ID=prot_P-littoralis_Contig705.18.1|Name=mRNA_P-littoralis_Contig705.18.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=273bp
CSHGQQQHSVVLGRGKRRCCDWKTQPTRTAEPPATGNQLTNRWIDWVLLT
NKIVYHRHQRHHHHHHHHHHHHHHTTMRVLQHNTGCTTAASYDACFRGLL
RSGLVAGLALLDAVGGHPLYENRIDERLLPRHRPPPPCCPPVTMRNRKEE
GEEEKEEEERQRDRPKDYRCCCDGLVSPSEGRQLVAAVKGLTDDGLCRRE
ALTCMGMPFRVFGGTPLGIYAVGVGRRTGLIARTLPLVGLLVVFYRRPHM
PQQVVPCVENFVDRFWTDVQDFG
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