mRNA_P-littoralis_Contig705.5.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig705.5.1 vs. uniprot
Match: D8LKF8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF8_ECTSI) HSP 1 Score: 203 bits (517), Expect = 1.760e-58 Identity = 94/114 (82.46%), Postives = 101/114 (88.60%), Query Frame = 1
Query: 1 RWKKVLQPGLNKGHWTAQEDEVVRSAVTKAEAAGS--WSRVAGLLPGRLGKQCRERWCNHLDPSVKKTKWTTHEDEVLFNAQRFFGTRWCEIAKFLPGRTENAVKNRYNSSARQ 336
RWKKVLQPGLNK HWT +EDE+VR AV A+A G+ WS VA LLPGRLGKQCRERW NHLDP+VKKT+WT HEDEVLFNAQ FFGTRWCEI+KFLPGRTENAVKNRYNSSARQ
Sbjct: 293 RWKKVLQPGLNKRHWTPEEDEIVRGAVLSAQAIGAVKWSLVAVLLPGRLGKQCRERWFNHLDPTVKKTEWTPHEDEVLFNAQAFFGTRWCEISKFLPGRTENAVKNRYNSSARQ 406
BLAST of mRNA_P-littoralis_Contig705.5.1 vs. uniprot
Match: A0A6H5LA90_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA90_9PHAE) HSP 1 Score: 202 bits (513), Expect = 6.020e-58 Identity = 93/114 (81.58%), Postives = 100/114 (87.72%), Query Frame = 1
Query: 1 RWKKVLQPGLNKGHWTAQEDEVVRSAVTKAEAAGS--WSRVAGLLPGRLGKQCRERWCNHLDPSVKKTKWTTHEDEVLFNAQRFFGTRWCEIAKFLPGRTENAVKNRYNSSARQ 336
RWKKVLQPGLNK HWT +EDE+VR V A+A G+ WS VA LLPGRLGKQCRERW NHLDP+VKKT+WT HEDEVLFNAQ FFGTRWCEI+KFLPGRTENAVKNRYNSSARQ
Sbjct: 293 RWKKVLQPGLNKRHWTPEEDEIVRGTVLSAQAIGAVKWSLVAMLLPGRLGKQCRERWFNHLDPTVKKTEWTPHEDEVLFNAQAFFGTRWCEISKFLPGRTENAVKNRYNSSARQ 406
BLAST of mRNA_P-littoralis_Contig705.5.1 vs. uniprot
Match: F0Y9B4_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9B4_AURAN) HSP 1 Score: 159 bits (402), Expect = 6.140e-48 Identity = 72/113 (63.72%), Postives = 84/113 (74.34%), Query Frame = 1
Query: 1 RWKKVLQPGLNKGHWTAQEDEVVRSAVTKAEAAG-SWSRVAGLLPGRLGKQCRERWCNHLDPSVKKTKWTTHEDEVLFNAQRFFGTRWCEIAKFLPGRTENAVKNRYNSSARQ 336
RW KVL+PGL+KG WTA ED++V+ V + A WS +A LPGR+GKQCRERW NHLDP +KK WT ED +LF QR G RW EIAK LPGRTENAVKNR+NSSAR+
Sbjct: 41 RWNKVLRPGLSKGPWTADEDKIVKDMVLRHGAGNIKWSVIAAQLPGRIGKQCRERWFNHLDPEIKKGDWTPEEDNILFETQRVHGNRWSEIAKLLPGRTENAVKNRWNSSARK 153
BLAST of mRNA_P-littoralis_Contig705.5.1 vs. uniprot
Match: A0A836C844_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C844_9STRA) HSP 1 Score: 159 bits (402), Expect = 6.530e-48 Identity = 75/116 (64.66%), Postives = 87/116 (75.00%), Query Frame = 1
Query: 1 RWKKVLQPGLNKGHWTAQEDEVVRSAVTKAEAAG----SWSRVAGLLPGRLGKQCRERWCNHLDPSVKKTKWTTHEDEVLFNAQRFFGTRWCEIAKFLPGRTENAVKNRYNSSARQ 336
RW KVL+PGL+KG WT ED VVR +V EA G WS VA LPGR+GKQCRERW NHLDP++K++ WT ED V+F AQ G RWCEIAK LPGRTENAVKNR+NSSA++
Sbjct: 43 RWNKVLRPGLHKGPWTETEDRVVRESV---EAVGIAKVKWSAVAAKLPGRIGKQCRERWFNHLDPAIKRSPWTPEEDTVVFEAQLRLGNRWCEIAKLLPGRTENAVKNRFNSSAQK 155
BLAST of mRNA_P-littoralis_Contig705.5.1 vs. uniprot
Match: F0Y5J6_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5J6_AURAN) HSP 1 Score: 158 bits (400), Expect = 2.670e-47 Identity = 69/115 (60.00%), Postives = 90/115 (78.26%), Query Frame = 1
Query: 1 RWKKVLQPGLNKGHWTAQEDEVVRSAVTKAEAAGS-----WSRVAGLLPGRLGKQCRERWCNHLDPSVKKTKWTTHEDEVLFNAQRFFGTRWCEIAKFLPGRTENAVKNRYNSSA 330
RW KV++PGLNKG W+A+EDEVV+S V K ++ + W+ +A +L GRLGKQCRERW NHLDP++KK +W HE+ LF+ Q+ +G RWCEIAK LPGR+ENA+KNR+NSSA
Sbjct: 62 RWTKVIKPGLNKGPWSAEEDEVVKSNVMKMQSESNEGVVKWAEIAKILKGRLGKQCRERWFNHLDPTIKKGEWEPHENRTLFDLQQQYGNRWCEIAKALPGRSENAIKNRWNSSA 176
BLAST of mRNA_P-littoralis_Contig705.5.1 vs. uniprot
Match: A0A835YLN0_9STRA (Homeodomain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLN0_9STRA) HSP 1 Score: 159 bits (403), Expect = 2.530e-46 Identity = 72/113 (63.72%), Postives = 86/113 (76.11%), Query Frame = 1
Query: 1 RWKKVLQPGLNKGHWTAQEDEVVRSAVTKAEAAG-SWSRVAGLLPGRLGKQCRERWCNHLDPSVKKTKWTTHEDEVLFNAQRFFGTRWCEIAKFLPGRTENAVKNRYNSSARQ 336
RWKK L+PGL+KG WT ED VVR +V + A WS +A LPGR+GKQCRERW NHLDP++K++ WT ED V+F AQ G RWCEIAK LPGRTENAVKNR+NSSA++
Sbjct: 82 RWKKTLRPGLHKGAWTEAEDRVVRESVEECGIAKVKWSTIAARLPGRIGKQCRERWFNHLDPALKRSTWTPEEDTVIFEAQARLGNRWCEIAKLLPGRTENAVKNRFNSSAQK 194
BLAST of mRNA_P-littoralis_Contig705.5.1 vs. uniprot
Match: A0A6U4HUA2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4HUA2_9STRA) HSP 1 Score: 164 bits (415), Expect = 2.250e-45 Identity = 74/113 (65.49%), Postives = 85/113 (75.22%), Query Frame = 1
Query: 1 RWKKVLQPGLNKGHWTAQEDEVVRSAVTKAEAAG-SWSRVAGLLPGRLGKQCRERWCNHLDPSVKKTKWTTHEDEVLFNAQRFFGTRWCEIAKFLPGRTENAVKNRYNSSARQ 336
RW KVL+PGL+KG W A EDEVVR V + WS +A LLPGR+GKQCRERW NHLDPS+ K WT ED ++F AQ+ FG RWCEIAK LPGRTEN VKNR+NSSAR+
Sbjct: 283 RWNKVLKPGLHKGPWQAAEDEVVRDMVIRHGVGKVKWSDIAALLPGRIGKQCRERWFNHLDPSISKAPWTEEEDTIIFEAQQIFGNRWCEIAKLLPGRTENMVKNRWNSSARK 395
BLAST of mRNA_P-littoralis_Contig705.5.1 vs. uniprot
Match: D7FRA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRA0_ECTSI) HSP 1 Score: 163 bits (413), Expect = 1.460e-44 Identity = 73/113 (64.60%), Postives = 87/113 (76.99%), Query Frame = 1
Query: 1 RWKKVLQPGLNKGHWTAQEDEVVRSAVTKAEAAG-SWSRVAGLLPGRLGKQCRERWCNHLDPSVKKTKWTTHEDEVLFNAQRFFGTRWCEIAKFLPGRTENAVKNRYNSSARQ 336
RW KVL+PGL+KG WT +ED +VR V + A WS VA LPGR+GKQCRERW NHLDPS+KK +W+ ED ++F AQ + G RWCEIAK LPGRTENAVKNR+NSSAR+
Sbjct: 136 RWNKVLRPGLHKGPWTEEEDSIVRECVEHSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARK 248
BLAST of mRNA_P-littoralis_Contig705.5.1 vs. uniprot
Match: A0A7S2BQG7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BQG7_9STRA) HSP 1 Score: 150 bits (380), Expect = 1.850e-44 Identity = 68/113 (60.18%), Postives = 83/113 (73.45%), Query Frame = 1
Query: 1 RWKKVLQPGLNKGHWTAQEDEVVRSAVTKAEAAG-SWSRVAGLLPGRLGKQCRERWCNHLDPSVKKTKWTTHEDEVLFNAQRFFGTRWCEIAKFLPGRTENAVKNRYNSSARQ 336
RW KVL+PGL+KG WT +ED +VR V A WS +A L GR+GKQCRERW NHLDP++ K +WT ED ++F AQ FG RW +IAK LPGRTEN+VKNR+NSSAR+
Sbjct: 48 RWNKVLRPGLHKGPWTEEEDGIVRDMVLMYGAGKVKWSAIAAKLHGRIGKQCRERWFNHLDPNINKGEWTPEEDRIVFEAQNQFGNRWSDIAKLLPGRTENSVKNRWNSSARK 160
BLAST of mRNA_P-littoralis_Contig705.5.1 vs. uniprot
Match: A0A7S1GEG8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GEG8_9STRA) HSP 1 Score: 152 bits (383), Expect = 2.270e-44 Identity = 70/113 (61.95%), Postives = 83/113 (73.45%), Query Frame = 1
Query: 1 RWKKVLQPGLNKGHWTAQEDEVVRSAVTKAEAAG-SWSRVAGLLPGRLGKQCRERWCNHLDPSVKKTKWTTHEDEVLFNAQRFFGTRWCEIAKFLPGRTENAVKNRYNSSARQ 336
RW KVL+PGL KG W +ED+VVR V K WS +A LPGR+GKQCRERW NHLDP++KK W ED ++F AQR G +WCEIA+ LPGRTENAVKNR+NSSAR+
Sbjct: 53 RWNKVLKPGLVKGPWLKEEDDVVRDMVMKYGVGQVRWSVIASKLPGRIGKQCRERWFNHLDPAIKKGGWMEEEDLLIFQAQREVGNKWCEIARMLPGRTENAVKNRWNSSARR 165 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig705.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig705.5.1 >prot_P-littoralis_Contig705.5.1 ID=prot_P-littoralis_Contig705.5.1|Name=mRNA_P-littoralis_Contig705.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=112bp RWKKVLQPGLNKGHWTAQEDEVVRSAVTKAEAAGSWSRVAGLLPGRLGKQback to top mRNA from alignment at P-littoralis_Contig705:40924..42350+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig705.5.1 ID=mRNA_P-littoralis_Contig705.5.1|Name=mRNA_P-littoralis_Contig705.5.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1427bp|location=Sequence derived from alignment at P-littoralis_Contig705:40924..42350+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig705:40924..42350+ >mRNA_P-littoralis_Contig705.5.1 ID=mRNA_P-littoralis_Contig705.5.1|Name=mRNA_P-littoralis_Contig705.5.1|organism=Pylaiella littoralis U1_48|type=CDS|length=336bp|location=Sequence derived from alignment at P-littoralis_Contig705:40924..42350+ (Pylaiella littoralis U1_48)back to top |