mRNA_P-littoralis_Contig702.30.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig702.30.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 174 bits (441), Expect = 3.080e-43 Identity = 174/442 (39.37%), Postives = 230/442 (52.04%), Query Frame = 1
Query: 124 MPRVRPSQTTNPGPKTDLHRYTFLAHYQYTAELLASGSVDIDGGDPDGYTALMYAAQQGEVVIAKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLEAPLYNAGLTALYIAVHGGGHKSLEMVRALIEGGA---NPNNRTFGGSTPLFAAAVMGRLEAVKMLLHAGASASLAN--ETTXXXXXXXXXXXXXXXXXXXXELIQHAGIENCGGTSGGIDALEYATHNHHVEIMATLTAAGVADTGEILNGAAKRGQETWVRNLLQQKR--NTTSRSAYVNNTCDSLGRTALLFACGFEGFPNPRIARMLVDAGADTTSPVLLRAEEGRVAYNDTPLTYTTRLLRWKIVFTEEDELGDATEEQLHRLEAIRRLLLRVEAVRSVCWLWPRDVHSSIAQAVASRSKTEMTSAPLISTSPICRKKAERHDELMARVL 1428
MPRV Q GP LH ++ TA +LASG+ DID G+ G+TALM A++ G I ++ XXXXXXXXXXXXXXXXXXXXXXXXXXX +EA T ++ N N+R G+TPL+ AA G ++A ++LL A A L + + ELI+ GI+ CGG+SGG+ AL+ A ++ IM LT AGV DTG L AA G ET ++ LL+Q R T +AYVN T D G T LL+ G + + PR+ R+LV+AGADTTSPV +R + G + TPL T +R K+ G A+ EQLH+LEAIRRLLLRVEAV +V WLWP D+ + A +T S + + R++A +A +L
Sbjct: 1 MPRVPRPQQRPRGPSNRLHAAAECGSFEATATVLASGAFDIDQGNEYGWTALMLASRGGYARIVGMILNKGAQVSITXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVEAT------TTQHLCXXXXXXXXXXXXXXXXXXXXXXXNLNSRRSDGATPLYTAAWKGNVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVN-TRDRGGVTPLLW--GIQHY-RPRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGR---GPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALL 429
BLAST of mRNA_P-littoralis_Contig702.30.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 171 bits (432), Expect = 2.810e-41 Identity = 150/435 (34.48%), Postives = 197/435 (45.29%), Query Frame = 1
Query: 154 NPGPKTDLHRYTFLAHYQYTAELLASGSVDIDGGDPDGYTALMYAAQQGEVVIAKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-ADLEAPLYNAGLTALYIAVHGGGHKSLEMVRALIEGGANPNNRTFGGSTPLFAAAVMGRLEAVKMLLHAGASASL------ANETTXXXXXXXXXXXXXXXXXXXXELIQHAGIENCGGTSGGIDALEYATHNHHVEIMATLTAAGVADTGEILNGAAKRGQETWVRNLLQQKRNTTS---RSAYVNNTCDSLGRTALLFACGFEGFPNPRIARMLVDAGADTTSPVLLRAEEGRVAYNDTPLTYTTRLLRWKIVFTEEDELGDATEEQLHRLEAIRRLLLRVEAVRSVCWLWPRDVHSSIAQAVASRSKTEMTSAPLISTSPICRKKAERHDELMARVL 1428
NP LHR + + T +LA G+V+ID + G T LM A G IAK+L ADL+A + G L+ A H H+ NP+ + GST L AA G++ ++ LL A+ L N TT ELIQ GIE C TS G AL +A N H++IMA LT AGV DTG+ L AA G E V+ LL+ + AY+N D G T L+ PRI RMLVDAGADTTSPV + +G V +NDTPL +T LR KIV + AT+E L RLEAI RLLLRV+AV +V WLWP I +A + + + + L+ PI +++ +R L+A +L
Sbjct: 102 NPHELNQLHRAVLVGSAELTQAVLAGGTVEIDQRNSYGATPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDAIIPGEGSAPLHRATH---HEXXXXXXXXXXXXXNPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVR----ELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNAR-DVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKP----ATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGA-PFIGRATETDPEPPLPALKLM--LPILKRRTKRRCGLVATLL 521
BLAST of mRNA_P-littoralis_Contig702.30.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 165 bits (417), Expect = 6.130e-40 Identity = 166/404 (41.09%), Postives = 217/404 (53.71%), Query Frame = 1
Query: 160 GPKTDLHRYTFLAHYQYTAELLASGSVDIDGGDPDGYTALMYAAQQGEVVIAKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLEAPLYNAGLTALYIAVHGGGHKSLEMVRALIEGGANPNNRTFGGSTPLFAAAVMGRLEAVKMLLHAGASASL--ANETTXXXXXXXXXXXXXXXXXXXXELIQHAGIENCGGTSGGIDALEYATHNHHVEIMATLTAAGVADTGEILNGAAKRGQETWVRNLLQQKRN--TTSRSAYVNNTCDSLGRTALLFACGFEGFPN--PRIARMLVDAGADTTSPVLLRAEEGRVAYNDTPLTYTTRLLRWKIVFTEEDELGDATEEQLHRLEAIRRLLLRVEAVRSVCWLWPRDVHSSIAQAVASRSKTEMTS 1353
GP L ++ A LLASG+ DID G+ G+T LM A++ G I ++L XXXXXXXXXXXXXXXXXXXXXXXXXXA L+A T L A G S V AL++ G+N N R G+TPL+ AA G + AV +LL A A L A+++ ELI+ GI+ CGG+SGG +AL A ++IMA LT AGV DTG L AA G E ++ LL+Q R +T R+AY+N T + +G T+LL +G PR+ ++LV+AGADTTSPVL+ + G ++ TPL T LL + T E+ ++LE IRRLLLR EAV +V WLWP D + +T TS
Sbjct: 13 GPSNPLQAAADCGSFKTAANLLASGAFDIDQGNEVGWTPLMMASRGGYPRIVRMLLNKGAQVWVTDXXXXXXXXXXXXXXXXXXXXXXXXXXALLDAATKQNHCTPLDCAAETGCAAS---VTALLKAGSNINTRRSDGATPLYTAAWNGNVVAVWLLLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMN-TLNGVGLTSLL-----DGIQRCRPRVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLTMCLLGGR-------SAKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATS 400
BLAST of mRNA_P-littoralis_Contig702.30.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI) HSP 1 Score: 150 bits (378), Expect = 5.040e-37 Identity = 100/208 (48.08%), Postives = 125/208 (60.10%), Query Frame = 1
Query: 814 NHHVEIMATLTAAGVADT-GEILNGAAKRGQETWVRNLLQQKRNTTSRS--AYVNNTCDSLGRTALLFACGFEGFPNPRIARMLVDAGADTTSPVLLRAEEGRVAYNDTPLTYTTRLLRWKIVFTEEDELGDATEEQLHRLEAIRRLLLRVEAVRSVCWLWPRDVHSSIAQAVASRSKTEMTSAPLISTSPICRKKAERHDELMARVL 1428
N H++IMA LT AGV D G +L G A G+E V+ LL+Q+R + S AY N++ D G T L + + NPRI R+LVDAGADTTS V + G V YNDTPL TT LLR K+V + ATEEQLHRL+AIRRLLLRV+AV +V WLWP D SI AV E PL T PI +++A+ +A +L
Sbjct: 2 NQHMDIMAILTGAGVRDAMGYVLLGTAGLGREASVQFLLRQRRKESEMSVHAYANSS-DGSGMTPLSCSIEWCSSGNPRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSLLREKVV-----DGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDA-PSIVHAVERSCGPEPRRPPLSLTLPILKRRAKTCHVFVATLL 202
BLAST of mRNA_P-littoralis_Contig702.30.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 139 bits (351), Expect = 1.440e-31 Identity = 121/355 (34.08%), Postives = 152/355 (42.82%), Query Frame = 1
Query: 574 GSTPLFAAAVMGRLEAVKMLLHAGASASLANETTXXXXXXXXXXXXXXXXXXXXELIQHAGIENCGGTSGGIDALEYATHNHHVEIMATLTAAGVADTGEILNGAAKRGQETWVRNLLQQKRNTTSRSAYVNNTCDSLGRTALL---FACGFEGFPN-PRIARMLVDAGADTTSPVLLRAEEGRVAYNDTPLTYTTRLLRWKIVFTEEDELGDAT---EEQLHRLEAIRRLLLRVEAVRSVCWLWPRDVHSSIAQAVASRSKTEMTSAPLISTSPICRKKAERHDELMARVLGWVMYFVSWLWLRNGLSIAQDAESKSKTKVISTPLGSMSPISRRRTRRRGVIWAAVLRYSHKP 1617
G TPLF A G+LEA + LL A A+ L ELIQ GIE CGG S G AL A V MA LT AGV DTG+ L +A G+E V+ LLQ AYVN D G T LL + CG + + PR+AR+LV+AGADTT+ + G V ++ TPL T +L +D+ D T +++L RLE IRRLLL+VEAV + WLWP R D AE + T + LG + PI RRR RR GV+W A+ R+ KP
Sbjct: 134 GETPLFRAMTEGQLEATRELLRANAN-PLITRAPLPTLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHAKHYGPGAYVN-VRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHIL--------QDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDG----------------------------GRRPDNA--------------------------AEVTTATNAAAPKLGRVLPILRRRARRPGVVWTALCRHQRKP 424
BLAST of mRNA_P-littoralis_Contig702.30.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI) HSP 1 Score: 140 bits (352), Expect = 1.490e-31 Identity = 95/227 (41.85%), Postives = 126/227 (55.51%), Query Frame = 1
Query: 736 ELIQHAGIENCGGTSGGIDALEYATHNHHVEIMATLTAAGVADTGEILNGAAKRGQETWVRNLLQQKRNTTS-RSAYVNNTCDSLGRTALL--FACGFEGFPNPRIARMLVDAGADTTSPVLLRAEEGRVAYNDTPLTYTTRLLRWKIVFTEEDELGDATEEQLHRLEAIRRLLLRVEAVRSVCWLWPRDVHSSIAQA---VASRSKTEMTSAPLISTS-PICRKKA 1395
EL+Q GI CGG +GG+ AL+ A H+++M LT AGV DTG L A G V+ LLQQ+ T S +SAYV+ D GRT L+ G +P++ R+LVDAGADTTS V + G + TPL+ T LR KI + + +E L RLE IRRLLLRVEAV + WLW V A A+ +++ T+AP + T PI R++A
Sbjct: 201 ELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQNGTPSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKA-----IPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRA 422
BLAST of mRNA_P-littoralis_Contig702.30.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE) HSP 1 Score: 138 bits (348), Expect = 2.990e-31 Identity = 90/217 (41.47%), Postives = 117/217 (53.92%), Query Frame = 1
Query: 736 ELIQHAGIENCGGTSGGIDALEYATHNHHVEIMATLTAAGVADTGEILNGAAKRGQETWVRNLLQQKRNTTSRSAYVNNTCDSLGRTALLFACGFEGFPNPRIARMLVDAGADTTSPVLLRAEEGRVAYNDTPLTYTTRLLRWKIVFTEEDELG--DATEEQLHRLEAIRRLLLRVEAVRSVCWLW-PRDVHSSIAQAVASRSKTEMTSAPLISTSP 1377
EL G+ CGG SGG+++L AT V+IM LT GV DTG L AA+ +E V+ LLQ + + YVNNT D GRT L+ G +PRIAR L+DA ADT S VL+ DTPL + T LR ++++G +ATEEQL L+AI RLL +V+AV +V WLW D +S A AS + PL+ P
Sbjct: 188 ELTHQLGVRGCGGVSGGVESLRLATTEQDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQ--AGGGAWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDAEADTKSTVLVTKSGQWTTSRDTPLGFATHSLR-------QNKVGRKNATEEQLRSLKAIHRLLSQVDAVHAVSWLWRSSDTRNSYAVGAASSRMKPTIAGPLLKRMP 395
BLAST of mRNA_P-littoralis_Contig702.30.1 vs. uniprot
Match: D7FXY7_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY7_ECTSI) HSP 1 Score: 135 bits (341), Expect = 4.430e-31 Identity = 120/338 (35.50%), Postives = 154/338 (45.56%), Query Frame = 1
Query: 436 ADLEAPLYNAGLTALYIAVHGGGHKSLEMVRALIEGGANPNNRTFGGSTPLFAAAVMGRLEAVKMLLHAGASASLANE--TTXXXXXXXXXXXXXXXXXXXXELIQHAGIENCGGTSGGIDALEYATHNHHVEIMATLTAAGVADTGEILNGAAKRGQETWVRNLLQQKRNTTSRSAYVNNTCDSLGRTALLF---ACGFEGFPNPRIARMLVDAGADTTSPVLLRAEEGRVAYNDTPLTYTTRLLRWKIVFTEEDELGDA--TEEQLHRLEAIRRLLLRVEAVRSVCWLWPRDVHS---SIAQAVASRSKTEMTSAPLISTSPICRKKAERHDELMA 1419
A LE T L IA G S+ L+E GAN N+R F G+TPLF AA G ++AV++LL A L T+ ELI+ GI CGG+SGG+ AL+ A N H++++ LT AGV DTG RG+ W R L+ TC F AC + PR+ R+LV+AGADTTS V + G N TP+ T LL +LG TEEQL+ LEAI RLLLRVEA+ +V WLW D+ + S AQ + PL+ T + ER L A
Sbjct: 7 APLEVATKQQLCTPLQIAAVNGCAASMT---TLLEAGANLNSRRFDGATPLFLAAWEGNVDAVRLLLLAKVDPLLTPHLGTSERASLPLDVAAGLGHLEVVNELIRQVGIGGCGGSSGGVRALQQAARNKHLDMLTVLTNAGVVDTG------LARGRRIWRRGPLEVSVGAGKGEENHGWTCVCEHPQRCRFDAIACWHQRC-RPRVVRLLVEAGADTTSTVPIDGLPG--TDNITPMGLTMLLLH---------DLGTEPLTEEQLNALEAIHRLLLRVEALHAVSWLWSSDICNCTYSTAQGTDRTTSKSTAGTPLVLTMRQRARSKEREVPLAA 323
BLAST of mRNA_P-littoralis_Contig702.30.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI) HSP 1 Score: 138 bits (348), Expect = 4.590e-31 Identity = 91/210 (43.33%), Postives = 121/210 (57.62%), Query Frame = 1
Query: 736 ELIQHAGIENCGGTSGGIDALEYATHNHHVEIMATLTAAGVADTGEILNGAAKRGQETWVRNLLQQKRNTTSRSAYVNNTCDSLGRTALLFACGFEGFPNPRIARMLVDAGADTTSPVLLRAEEGRVAYNDTPLTYTTRLLRWKIVFTEEDELG--DATEEQLHRLEAIRRLLLRVEAVRSVCWLWPRDVHSSIAQAV-ASRSKTEMTSA 1356
ELIQ G+ CGG S G+++L A +V+IM LT GV DTG L AA+ +E V+ LLQ + + YVNNT D GRT L+ G +PRIAR L+D GADT S VL+ DTPL + TR LR ++++G +ATEEQL L+AI RLL ++EAV +V WLW R + I AV A+ S+ + T+A
Sbjct: 198 ELIQQLGVRGCGGVSAGVESLRLAATEQYVDIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQ--AGGGTWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDDGADTKSTVLVTRSGEWTTSRDTPLGFATRSLR-------QNKVGGKNATEEQLRSLKAIHRLLSQIEAVHAVSWLW-RSSDTPIGHAVGAASSRMKPTTA 397
BLAST of mRNA_P-littoralis_Contig702.30.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI) HSP 1 Score: 136 bits (342), Expect = 1.530e-30 Identity = 100/225 (44.44%), Postives = 125/225 (55.56%), Query Frame = 1
Query: 736 ELIQHAGIENCGGTSGGIDALEYATHNHHVEIMATLTAAGVAD-TGEILNGAAKRGQETWVRNLLQQKRNTTSRSAYVNNTCDSLGRTALLFAC-GFEGFP-NPRIARMLVDAGADTTSPVLLRAEEGRVAYNDTPLTYTTRLLRWKIVFTEEDELGDATEEQLHRLEAIRRLLLRVEAVRSVCWLWPRDVHSSIAQAVASRSKTEMTSAPLISTSPICRKKAER 1401
EL++ GI CGG SGG+DAL A V+IM+ L AGV D G L A G+E V LL+Q+ S YVN D G TALL++ G + P NPRI R LVDAGADTTS V LRA+ R N TPL Y W + T D AT+EQL RLEA RR+LLRV AV +V W+WP D +A+ S + + L + P+ R++A R
Sbjct: 174 ELLREFGIRCCGGPSGGLDALRVAAVYGQVDIMSMLMDAGVVDPVGLALLAAVGSGKEAAVGFLLRQQEERWQTS-YVNIARDDDGLTALLWSFRGNKNKPCNPRITRRLVDAGADTTSAVQLRAKRSRTCVNVTPLEYVND---WALRETNGDH--PATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDA-PLLARPANSPRTAKHSPTQLTTVLPVLRRRAGR 391 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig702.30.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig702.30.1 >prot_P-littoralis_Contig702.30.1 ID=prot_P-littoralis_Contig702.30.1|Name=mRNA_P-littoralis_Contig702.30.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=499bp MPRVRPSQTTNPGPKTDLHRYTFLAHYQYTAELLASGSVDIDGGDPDGYTback to top mRNA from alignment at P-littoralis_Contig702:78617..90872+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig702.30.1 ID=mRNA_P-littoralis_Contig702.30.1|Name=mRNA_P-littoralis_Contig702.30.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=12256bp|location=Sequence derived from alignment at P-littoralis_Contig702:78617..90872+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig702:78617..90872+ >mRNA_P-littoralis_Contig702.30.1 ID=mRNA_P-littoralis_Contig702.30.1|Name=mRNA_P-littoralis_Contig702.30.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1497bp|location=Sequence derived from alignment at P-littoralis_Contig702:78617..90872+ (Pylaiella littoralis U1_48)back to top |