mRNA_P-littoralis_Contig702.7.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig702.7.2 vs. uniprot
Match: D7FPW9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPW9_ECTSI) HSP 1 Score: 604 bits (1558), Expect = 2.660e-205 Identity = 347/453 (76.60%), Postives = 366/453 (80.79%), Query Frame = 1
Query: 82 MRWRISLLAAEVLLIVGATGWF-CNPNVLAFTSCNTDSPPSRLLL-----HSSSXXXXXXXXXXXXXQHQDKHVEFKGLRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDNLPSKNYNKDAWQRRASRAMKYVSMPIVRKAGQPREQLMIEMPFPAANTTVHFTFDTLRRTTLITPTAKDSLGVIEGPSVGGQPDFGACVELPAARIGDKHGDHYLLVMDAVVANKEQVKVLGPNTGGVLGLDFLGRYDLDFNFETNEARFYVAGAVDQGLVDTSSLEGLKCGILPGGKLAITMELNGGGPFTGVLDLASTSTVGNWLAARDLDVTSMASGQTSSYPEETGRSRPLMCAHFDTIQLGHVLLASVVDAKNASEGRLAVYVGHLPEFESIARDISSRTPKCRQLALVGQDLITHTRVVLSCRSKRLYFAPLEANDVWAGQVV 1422
MRW +SLLAAE LL VGATGW CNP LAF SPP +S XXXXXXX + VEFKG RR XXXXXXXXXXX GD P+KNYNKDAWQRRASRAMKYVSMPIV+ AGQPREQ+MI MPFPAAN TVHF+FDTLRRTTLITPTAKD+LGV+EGP +GGQPDFGACVELPAARIG +HGDHYLLVMDAVVAN EQVKVLGPNTGGVLGLDFL RYDLD NFETNEARFYVAGAVDQGLVDTS LEGLKCG LPGGKLAI MELNGGGPFTGVLDLAS++TVGNWLAARDLDVTSMASGQ+SSYP+ETGRS PLMCA FDTIQLGHVLLASVVDAK ASEGRLAVYVGHLP F+SIARDIS R P+ RQLALVGQDLI HTR+VLSCRSKRLYFAPLEAND+WAGQVV
Sbjct: 1 MRWNVSLLAAEGLL-VGATGWSSCNP--LAF------SPPCEACASFRRPRASRHQAERKXXXXXXXXXXXRRVEFKGFRRRRVLHTXXXXXXXXXXXGDC--------------------GDR-PNKNYNKDAWQRRASRAMKYVSMPIVKMAGQPREQIMIAMPFPAANATVHFSFDTLRRTTLITPTAKDALGVLEGPGIGGQPDFGACVELPAARIGHEHGDHYLLVMDAVVANSEQVKVLGPNTGGVLGLDFLNRYDLDLNFETNEARFYVAGAVDQGLVDTSLLEGLKCGSLPGGKLAIKMELNGGGPFTGVLDLASSTTVGNWLAARDLDVTSMASGQSSSYPQETGRSLPLMCAQFDTIQLGHVLLASVVDAKTASEGRLAVYVGHLPVFDSIARDISIREPRSRQLALVGQDLIGHTRIVLSCRSKRLYFAPLEANDIWAGQVV 423
BLAST of mRNA_P-littoralis_Contig702.7.2 vs. uniprot
Match: A0A835ZPQ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPQ0_9STRA) HSP 1 Score: 295 bits (756), Expect = 2.180e-87 Identity = 159/332 (47.89%), Postives = 218/332 (65.66%), Query Frame = 1
Query: 454 NKDAWQRR---ASRAMKYVSMPIVRKAGQPREQLMIEMPFPAANTTVHFTFDTLRRTTLITPTAKDSLGVIEGPSVGGQPDFGAC-------VELPAARIGDKHGDHYLLVMDAVVANKEQVKVLGPNTGGVLGLDFLGRYDLDFNFETNEARFYVAGAVDQGLVDTSSLEGLKCGILPGGKLAITMELNGGGPFTGVLDLASTSTVGNWLAARDLDVTSMASGQTSSYPEETGRSRPLMCAHFDTIQLGHVLLASVVDAKNASEGRLAVYVGHLPEFESIARDISSRTPKCRQLALVGQDLITHTRVVLSCRSKRLYFAPLEANDVWAGQV 1419
N+ ++RR + +A+ S+P+ + A QP+EQL++ + FPAAN T++F DT+ + TLI+P A+D LG+ G G + G V LPAARIG H+ + DAVV + E+++ GVL L FL YDLD + Y+ GAVD G+++T LE ++C LPGGKL + MELNGGG FTGVLD+ S S+VGNW AARDLDV+ + S YP+ETGR RPL A FDT+Q+GHVLL++V DA+ ++GRL++YVG+LPEF+ + DI RQLALVG DL+ +TR+V+S +SKR++F E NDVWAGQV
Sbjct: 41 NEPGFRRRPTPSEKAISCASVPLRKHANQPKEQLVMPLDFPAANVTLNFIIDTVSQDTLISPRARDLLGI--GADEGAEVRVGLFHATRGRQVTLPAARIGRADRPHFFTICDAVVVDTERMQ-FSSAVDGVLALAFLANYDLDIQMNAGKVDVYLQGAVDSGMLNTEGLEEVRCNTLPGGKLGVKMELNGGGVFTGVLDMGSNSSVGNWAAARDLDVSELFLQDASRYPQETGRLRPLFKACFDTVQVGHVLLSNVPDAQTDAQGRLSMYVGYLPEFDLLQEDIRGTRDPARQLALVGLDLLGNTRIVISVKSKRIFFKAKELNDVWAGQV 369
BLAST of mRNA_P-littoralis_Contig702.7.2 vs. uniprot
Match: A0A7R9TXH2_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TXH2_MICPS) HSP 1 Score: 111 bits (278), Expect = 8.730e-23 Identity = 94/324 (29.01%), Postives = 148/324 (45.68%), Query Frame = 1
Query: 460 DAWQRRASRAMKYVSMPIVRKAGQPRE-QLMIEMPFPAANTTVHFTFDTLRRTTLITPTAKDSLGV--IEGPSVGGQPDFGACVELPAARIGDKHGDHYLLVMDAVVANKEQVKVLGPNTGGVLGLDFLGRYDLDFNFETNEARFYVAGAVDQGLVDTSSLEGLKCGILPGGKLAITMELNGGGPFTGVLDLASTSTVGNWLAARDLDVTSMASGQTSSYPEETG---RSRPLMCAHFDTIQLGHVLLASVVDAKNASEGRLAVYVGHLPEFESIARDISSRTPKCRQLALVGQDLITHTRVVLSCRSKRLYFAPLEA-NDVWA 1410
DAW + S+ + IV G PR +++ + P V F D+ T +++P ++ LG +G ++ G G V G G + +DAVV + + L GG+LGL+FL +++ +F+F RF+ G+V G VD S L + G P G + LNGG PF G++D+ S +V NW+AA V+ + G S + G R+ + A F LG A + SE + VG LP F S+ + S+ C VG D+I R +L ++ R+Y P +A +W+
Sbjct: 34 DAWIEKRSKTVNLPLRQIVGMPGNPRAGYVVVTLDLPGDAGFVDFLVDSGATTAIVSPRLREMLGASATDGAAIRGLGAMGETVRQKVTIDGVGVGSVRIGALDAVVTDLD-ASGLPAVVGGLLGLEFLSKFECEFDFTDKALRFHPPGSVACGAVDASDLVAIPLGTHPTGLRTVQCALNGGAPFPGIVDMGSFFSVVNWIAANSGGVSPDSPGVAESAMKAVGIDGRAMNMATAAFTLDVLG----AEGEETSLKSEYKGQCCVGDLPAFASLGAETSA----CMS---VGLDVIGRGRTILDVKNDRVYLTPGDAPGGMWS 345
BLAST of mRNA_P-littoralis_Contig702.7.2 vs. uniprot
Match: A0A7S0KJS2_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0KJS2_9CHLO) HSP 1 Score: 97.1 bits (240), Expect = 1.890e-17 Identity = 84/278 (30.22%), Postives = 125/278 (44.96%), Query Frame = 1
Query: 589 FTFDTLRRTTLITPTAKDSL---GVIEGPSVGGQPDFGACVELPAARIGDKHGDH-YLLVMDAVVANKEQVKVLGPNTGGVLGLDFLGRYDLDFNFETNEARFYVAGAVDQGLVDTSSLEGLKCGILPGGKLAITMELNGGGPFTGVLDLASTSTVGNWLAAR------DLDVTSMASGQTSSYPEETGRSRPLMCAHFDTIQLGHVLLASVVDAKNASEGRLAVYVGHLPEFESIARDISSRTPKCRQLALVGQDLITHTRVVLSCRSKRLYFAPLE 1392
F DT L+TP A +S+ VIEG ++ G G + G + G H ++ +DAVV + V L P GG+LGLDFLG++ ++F+F +++ F+ GAV+ G VD L + P G + + LNG PF+ ++D+ S +V NW+A+ D D Q S G+S + A FD LG D + +G V G LP F ++ +S +G D+I R V LY A E
Sbjct: 157 FVIDTGATAALVTPKAIESMDKENVIEGAAIRGLTGTGETLRQKVTLKGVRMGAHEFVDGLDAVVTDLTAVG-LPPVIGGLLGLDFLGKFVVEFDFSSSKLSFWPLGAVENGAVDVDDLVKIPMTTHPVGLKTVQVSLNGAAPFSAIVDMGSFFSVANWIASASAGIGPDSDKVKRGGLQVSGVD---GQSMNMAMAPFDLRVLGE---PGGDDLSSVYKGMCCV--GDLPAFNALGASVSP-------FMAMGLDVIGRGRCVFDASKNVLYLAKGE 418
BLAST of mRNA_P-littoralis_Contig702.7.2 vs. uniprot
Match: A0A1Y5IC47_OSTTA (Uncharacterized protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5IC47_OSTTA) HSP 1 Score: 93.6 bits (231), Expect = 2.240e-16 Identity = 83/282 (29.43%), Postives = 122/282 (43.26%), Query Frame = 1
Query: 589 FTFDTLRRTTLITPTAKDSL---GVIEGPSVGGQPDFGAC----VELPAARIGDKHGDHYLLVMDAVVANKEQVKVLGPNTGGVLGLDFLGRYDLDFNFETNEARFYVAGAVDQGLVDTSSLEGLKCGILPGGKLAITMELNGGGPFTGVLDLASTSTVGNWLAARDLDVTSMASGQTSSYPEET----------GRSRPLMCAHFDTIQLGHVLLASVVDAKNASEGRLAVYVGHLPEFESIARDISSRTPKCRQLALVGQDLITHTRVVLSCRSKRLYFA 1383
F DT T LITP A + L V EG +V G G V + R+G K L V+DAVV + V L P GG+LGLDFL +++++FNF + +F+ G++ G VDT L + + P G + LN PF ++D+ S +V NW+A S +G PE G S + A FD +G D + G V G LP F ++ +S + +G D+I R+V + +Y +
Sbjct: 145 FVIDTGATTALITPKALEMLDKENVTEGAAVRGLTGTGETLRQKVSVSDVRLGSK-----LFVLDAVVTDLSAVG-LPPQIGGLLGLDFLSKFEIEFNFTDSALKFWPKGSIANGAVDTDDLVKIPLHLHPVGLRTVKCSLNNSAPFDAIVDMGSFFSVANWMA-------STTAGIGPDSPEVKRGGLQVSGVDGGSMQMAMAPFDLRVIGEA-----EDLSSTYRGMCCV--GDLPAFNALGASVSP-------MMALGLDVIGRGRMVFNASDNCMYLS 399
BLAST of mRNA_P-littoralis_Contig702.7.2 vs. uniprot
Match: C1FGK3_MICCC (Uncharacterized protein n=2 Tax=Micromonas TaxID=38832 RepID=C1FGK3_MICCC) HSP 1 Score: 87.0 bits (214), Expect = 3.630e-14 Identity = 88/325 (27.08%), Postives = 131/325 (40.31%), Query Frame = 1
Query: 460 DAWQRRASRAMKYVSMPIVRKAGQPREQLMIEMPFPAANTTVHFTFDTLRRTTLITPTAKDSLGV--IEGPSVGGQPDFGACVELPAARIGDKHGDHYLLVMDAVVANKEQVKVLGPNTGGVLGLDFLGRYDLDFNFETNEARFYVAGAVDQGLVDTSSLEGLKCGILPGGKLAITMELNGGGPFTGVLDLASTSTVGNWLAARDLDV---TSMASGQTSSYPEETGRSRPLMCAHFDTIQLGHVLLASVVDAKNASEGRLAVYVGHLPEFESIARDISSRTPKCRQLALVGQDLITHTRVVLSCRSKRLYFAPLEA-NDVWAGQ 1416
+AW + + +V G PR ++ V F D+ T LI+P ++ LG I+G + G G V G G L +DAVV + L GG+LGLDFL R++L+ +F RF+ G+V G +D SL + P G ++ LNG F G+LD+ S +V NW+AA V + + GR + A FD G ++ +G V G LP F S+ S VG D++ R VLS + +Y P +A +W +
Sbjct: 107 NAWGEKLKGTVTLPLRQLVGMPGNPRAGYVVVTLDVGEAGFVDFLIDSGATTALISPQLREMLGASAIDGAPIRGLGAGGETVRQKVTIAGASVGALELGALDAVVTDLA-ASGLPSVVGGMLGLDFLSRFELELDFADKAMRFHPIGSVATGALDVDSLVHIPLARHPTGLRTVSCRLNGCERFPGILDMGSFFSVCNWMAAARAGVGPDNPVVKNAAMTAVGVDGRPMAMSTAPFDLEVCGDGTDEGGQGLRSEYKGECCV--GDLPAFASLGATASP-------FMTVGLDVLGRGRSVLSVGADAVYLTPGDAPGGMWDSE 421
BLAST of mRNA_P-littoralis_Contig702.7.2 vs. uniprot
Match: A4S210_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S210_OSTLU) HSP 1 Score: 78.2 bits (191), Expect = 2.450e-11 Identity = 82/288 (28.47%), Postives = 122/288 (42.36%), Query Frame = 1
Query: 589 FTFDTLRRTTLITPTAKDSLG---VIEGPSVGGQPDFGAC----VELPAARIGDKHGDHYLLVMDAVVANKEQVKVLGPNTGGVLGLDFLGRYDLDFNFETNEARFYVAGAVDQGLVDTSSLEGLKCGILPGGKLAITMELNGGGPFTGVLDLASTSTVGNWLAAR------DLDVTSMASGQTSSYPEETGRSRPLMCAHFDTIQLGHVLLASVVDAKNASEGRLAVYVGHLPEFESIARDISSRTPKCRQLALVGQDLITHTRVVLSCRSKRLYFAPLEANDVWAG 1413
F DT T LITP A D L V EG +V G G V + R+G K V+DAVV + V L GG+LGLD+LG ++++F+FE + F+ G+V G V L ++ P G + LNG ++D+ S +V NW+A+ D D Q + G+S + A +D LG D + +G + G LP F ++ +S +G D+I R+V + + +Y L DV G
Sbjct: 154 FVIDTGATTALITPKALDMLDKDQVKEGAAVRGLTGTGETLRQKVSISEVRLGSKE-----FVLDAVVTDLTAVG-LPATIGGLLGLDWLGNFEVEFDFEQSVITFWPPGSVKNGAVAVEDLVRVRLNQHPVGLKTVRCSLNGA-ELDAIVDMGSFFSVVNWMASTTAGIGPDSDKVKRGGLQVTGVD---GKSMAMAMAPYDLRVLGD----GEEDLTSTYQGMCCI--GDLPAFAALGASVSP-------FMALGLDVIGRGRMVFNAKDNAMY---LSKGDVTYG 415
BLAST of mRNA_P-littoralis_Contig702.7.2 vs. uniprot
Match: A0A7S2KXI8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KXI8_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 1.280e-8 Identity = 90/324 (27.78%), Postives = 135/324 (41.67%), Query Frame = 1
Query: 520 KAGQPREQLMIEMPFPAANTTVHFTFDTLRRTTLITPTAKDSLGV------IEGPSVGGQPDFGACVELPAARI------GDKHGDHYLLVMDAVVAN--KEQVKVLGPNTGGVLGLDFLGRYDLDFNFETNEARFYVAGAVDQ-GLVDTSSLEGLKCGILPGGKLAITMELNGGGPFTGVLDLASTSTVGNWLAARDLDVTSMASGQTSSYPEETG------------RSRPL-MCAHFDTI---QLGHVLLASVVDAKNASEGRLAVYVGHLPEFESIARDISSRTPKCRQLALVGQDLITHTRVVLSC----RSKRLYFAP 1386
K G RE ++I++ F D+ T LITP ++ LG+ + G + GG + G V+L A + + L + AVV++ E + L G++G++ L +D+DF+F R + G D GLV+ + G+L G A++ P G++D S ++ NW AA L + S S PE G RS PL C D + Q G V N V VG L F S+ D RTP L+G D+++ +VVL R++RLY AP
Sbjct: 106 KGGFGREYVVIQLMIQGKGP-FDFMVDSGLTTELITPHLQNMLGIKSSGQKLNGLAAGGS-NVGDVVDLIGASLCCGEFANPGQTEFRLPTLTAVVSDFPMEHIDPLHDPVEGMIGMELLQYFDVDFDFPKGRLRLWKPGTADHHGLVEVPGAVLNESGLL--GIRALSPNQPSNQPVVGIIDCGSAFSIVNWKAAELLGMPSRDSDAYRGSPEIIGLGLDGSQIRMPTRSVPLTFCG--DAVRDPQSGRVSFEP--PPNNWKPWESVVAVGDLAVFSSLLGD--GRTPYNGPAVLIGLDILSQRQVVLEAGGRNRARRLYIAP 419
BLAST of mRNA_P-littoralis_Contig702.7.2 vs. uniprot
Match: A0A1E7FHD0_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FHD0_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 2.790e-8 Identity = 87/313 (27.80%), Postives = 128/313 (40.89%), Query Frame = 1
Query: 520 KAGQPREQLMIEMPFPAANTTVHFTFDTLRRTTLITPTAKDSLGVIEGPSV------GGQPDFGACVELPAARI--GDKHGDHYLLVMDAVVAN--KEQVKVLGPNTGGVLGLDFLGRYDLDFNFETNEARFYVAGAVD-QGLVDTSSL---EGLKCGILPGGKLAITMELNGGGPFTGVLDLASTSTVGNWLAARDLDVTSMASGQTSSYPEETGRS---RPLMCAHFDTIQLGHVLLAS-VVDAKNASE-------------GRLAVYVGHLPEFESIARDISSRTPKCRQLALVGQDLITHTRVVLSCRS 1365
K+G RE + ++M F D+ T LITP + LG+ EG + GG+ + VEL A I GD L + AV+ N +E + G+LG++ L +D+DF+F N R Y G D GLV+ ++ E L GI T + + P G LD S T NW AA+ L + + P T RPL TI+ + ++D K+ + + VG LP F +I D TP AL+G D + R++L +S
Sbjct: 8 KSGFGREYIALKMKIEGKGP-FDFMVDSGLTTELITPHLQGILGINEGSNKLTALASGGKTIANSLVELKGASIDIGDGSSGLALPKLTAVITNFPQEHIDPTHDPVEGMLGMELLQLFDVDFDFPKNRIRLYEPGGTDTSGLVEIPAVVINESLLIGIR-----VTTPDQSNSQPILGFLDCGSAFTCINWKAAQALGLPPKNDPVYRNGPTITALGIDGRPLT---LPTIKKRLSYAGNPIIDPKSGRPIGFESPPASWKPWDSVQIAVGDLPVFSNILGD--GVTPYDGPAALIGLDFLAQRRIILEAKS 309
BLAST of mRNA_P-littoralis_Contig702.7.2 vs. uniprot
Match: K8EXN0_9CHLO (Uncharacterized protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EXN0_9CHLO) HSP 1 Score: 68.6 bits (166), Expect = 2.970e-8 Identity = 62/209 (29.67%), Postives = 95/209 (45.45%), Query Frame = 1
Query: 652 VIEGPSVGGQPDFGACVELPAARIGDKHGDHYLLVMDAVVANKEQVKVLGPNTGGVLGLDFLGRYDLDFNFETNEARFYVAGAVDQGLVDTSSLEGLKCGILPGGKLAITMELNGGGPFTGVLDLASTSTVGNWLAARDLDVTSMASGQTSS---YPEETGRSRPLMCAHFDTIQLGHVLLASVV-DAKNASEGRLAVYVGHLPEFESI 1266
VI+ PS+G VE+P +DAVV + L P GG+LGLDFL R++++F+F+ F+ G+ G+ D S L ++ P G + LN PF ++D+ S +V NW A+ VT + SS + TG L F+ LG + + D ++ +G A VG LP FE++
Sbjct: 221 VIKNPSLG-------AVEIPE--------------LDAVVTDLRSTG-LPPVVGGLLGLDFLKRFEVEFDFDKEIIAFHPKGSAITGVCDVSELIKIRLKTHPTGLQLAPISLNNCAPFDAIIDMGSLFSVINWKASERAGVTKDSPDLDSSGVISNDVTGAQMGLAIGKFNLRVLGEGGNSDLAHDLESTYKG--AACVGDLPAFETL 405 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig702.7.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig702.7.2 >prot_P-littoralis_Contig702.7.2 ID=prot_P-littoralis_Contig702.7.2|Name=mRNA_P-littoralis_Contig702.7.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=448bp MRWRISLLAAEVLLIVGATGWFCNPNVLAFTSCNTDSPPSRLLLHSSSSRback to top mRNA from alignment at P-littoralis_Contig702:16197..24189+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig702.7.2 ID=mRNA_P-littoralis_Contig702.7.2|Name=mRNA_P-littoralis_Contig702.7.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=7993bp|location=Sequence derived from alignment at P-littoralis_Contig702:16197..24189+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig702:16197..24189+ >mRNA_P-littoralis_Contig702.7.2 ID=mRNA_P-littoralis_Contig702.7.2|Name=mRNA_P-littoralis_Contig702.7.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1344bp|location=Sequence derived from alignment at P-littoralis_Contig702:16197..24189+ (Pylaiella littoralis U1_48)back to top |