prot_P-littoralis_Contig118.5.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig118.5.1
Unique Nameprot_P-littoralis_Contig118.5.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length284
Homology
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BLAST of mRNA_P-littoralis_Contig118.5.1 vs. uniprot
Match: A0A6H5JJS4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJS4_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 1.050e-29
Identity = 69/183 (37.70%), Postives = 103/183 (56.28%), Query Frame = 0 
Query:   56 CSFEKVFGSVRGMLPATA-PGRNTPNLPRLDRYATALIPERLRHIWEAWFVETDGNCLWRALAKALWDCDQFWPHLKVVVLGWTAVNAGALVEDGGVLF-RCKKFYSQPVVEKYSCPADSSGLTCDAVDNALMMVLESILEFCPNKKWGGDLTALWTSEALGITVKLVVPTDMQARKKNEATG 236
            C++ KVFG+  G++P  A PG+        D  AT ++   LR  + A +VE DGNC WR++AKALW  D++W  LK+ VL W+AVN  ALV +GG LF R    +    +          G     +D+   M+LESI +F  N++WGG L  +  +E  G+ +K+  P DM+AR + + +G
Sbjct:   60 CTWPKVFGTPEGVVPTVARPGKGQE---MYDPKATMILTPELRKTFVALWVEGDGNCFWRSMAKALWGTDEYWRQLKLAVLAWSAVNVEALVGEGGALFGRAGIIHYDDEIHAKHIYRGPDGKVDHRLDDDASMLLESIAKFSANRQWGGCLAGVLFTERTGLVLKMPHPFDMRARIRADTSG 239
[Close]
BLAST of mRNA_P-littoralis_Contig118.5.1 vs. uniprot
Match: A0A6H5K454_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K454_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 6.520e-25
Identity = 68/167 (40.72%), Postives = 92/167 (55.09%), Query Frame = 0 
Query:  100 WEAWFVETDGNCLWRALAKALWDCDQFWPHLKVVVLGWTAVNAGALVEDGGVLFRCKKFYSQPVVEK--YSCPADSSGLTCDAVDNALMMVLESILEFCPNKKWGGDLTALWTSEALGITVKLVVPTDMQARKKNEATGGQPGG--GTGRNGGNRDISRSSRCFRPD 262
            W A +V  DGNC WR+LAK LW+ D++W  LK+VVL W A +A  LV +G VL      +S  +     Y+  A   G    +V     M+L S+   C +  WGGD T L  S+AL ITVKL+ P D+  RK++E++   PG   G GR G   D +R S+ F  D
Sbjct:    6 WVALWVRGDGNCCWRSLAKCLWESDEYWSQLKLVVLAWAAAHAEELVSEGRVLSDFSLHFSDDIHAGLGYAYSATCVG-AAPSVAQTSRMLLASVAYDCEDTVWGGDFTLLLASQALKITVKLLSPNDVMVRKRDESSA-TPGTIRGAGRKGDKVDDTRLSQTFLAD 170
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig118.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JJS4_9PHAE1.050e-2937.70SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K454_9PHAE6.520e-2540.72SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..257

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig118contigP-littoralis_Contig118:30073..32566 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig118.5.1mRNA_P-littoralis_Contig118.5.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig118 27690..32625 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig118.5.1 ID=prot_P-littoralis_Contig118.5.1|Name=mRNA_P-littoralis_Contig118.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=284bp
MSRKRTCRVLDEMTVEFRLSQLNDILQRTVETMRGDDVIQGKKAMAILQN
WCGENCSFEKVFGSVRGMLPATAPGRNTPNLPRLDRYATALIPERLRHIW
EAWFVETDGNCLWRALAKALWDCDQFWPHLKVVVLGWTAVNAGALVEDGG
VLFRCKKFYSQPVVEKYSCPADSSGLTCDAVDNALMMVLESILEFCPNKK
WGGDLTALWTSEALGITVKLVVPTDMQARKKNEATGGQPGGGTGRNGGNR
DISRSSRCFRPDKGQSGAYMGKKIVLWTRSLSL*
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