mRNA_P-littoralis_Contig118.5.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig118.5.1
Unique Name	mRNA_P-littoralis_Contig118.5.1
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig118.5.1 vs. uniprot
Match: A0A6H5KGV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGV9_9PHAE)

HSP 1 Score: 216 bits (551), Expect = 9.680e-60
Identity = 110/227 (48.46%), Postives = 142/227 (62.56%), Query Frame = 3

Query: 1575 KEVFWVDGLQPSGAEERTRAATAVRAGIGLGRGIYSIKELELALAVGRAPHESTKESKVPGYGVTWHDTTYDNWSLQVEGEGPNPHPYTGLSGGMHVGPDAIHETNHNEQCRLDYSGISTCAHISGVCATVAEQHNSKKPVYFRSVNTMGFANFAYTLRVINEVQNEQYNKKTLGTFLGAIDGHPRHNLSICVEALWDSGRCFCAKPVMRVFDRFGRVDFVFLTAML 2255
            K  F VDG+QP G +ER  A +A+R GIG G G++SI  L++ALAV   PHES K  KV GY   WHDTT+D+ S +          Y     GM VGPD  HE NH+++C+  YSG +TC  ++G+     EQ +SKK +  RS+NTM F+NF + LRVINE QN+ +N+KTL T L ++   P+ +   C  ALW  GRCFC K VMRVFD  GRVD V L  +L
Sbjct:   90 KTKFIVDGVQPIGEKERKIAESAIRCGIGCGDGVHSIMALQIALAVDVPPHESAKNFKVAGYDCVWHDTTFDDKSSEHA-------KYKMWQSGMFVGPDGPHEKNHSKECQRQYSGFTTCDELAGINLNPHEQDHSKKALCLRSLNTMTFSNFTFALRVINERQNQGFNRKTLRTLLASVTELPKDSFDGCEAALWRCGRCFCGKSVMRVFDCLGRVDIVMLATVL 309

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BLAST of mRNA_P-littoralis_Contig118.5.1 vs. uniprot
Match: A0A6H5KPQ6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPQ6_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 1.120e-54
Identity = 100/206 (48.54%), Postives = 130/206 (63.11%), Query Frame = 3

Query: 1638 TAVRAGIGLGRGIYSIKELELALAVGRAPHESTKESKVPGYGVTWHDTTYDNWSLQVEGEGPNPHPYTGLSGGMHVGPDAIHETNHNEQCRLDYSGISTCAHISGVCATVAEQHNSKKPVYFRSVNTMGFANFAYTLRVINEVQNEQYNKKTLGTFLGAIDGHPRHNLSICVEALWDSGRCFCAKPVMRVFDRFGRVDFVFLTAML 2255
            +A R GIG G G++SI  L++ALAV   PHES K  KV GY   WHDTT+D+ S +          Y     GM VGPD  HE NH+++C+  YSG +TC  ++G+     EQ +SKK +Y RS+NTM  +NF + LRVINE QN+ +N+KTL T L ++  HP+ + + C  ALW  GR FC KPVMRVFD  GRVD V L  +L
Sbjct:   24 SATRCGIGGGDGVHSIMALQIALAVDVPPHESAKNFKVAGYDCVWHDTTFDDKSSEHA-------KYKMWQSGMFVGPDGPHEKNHSKECQRQYSGFTTCDELAGINLNPHEQDHSKKALYLRSLNTMTSSNFTFALRVINERQNQGFNRKTLRTLLASVTEHPKDSFAGCEAALWRCGRRFCGKPVMRVFDCLGRVDIVMLATVL 222

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BLAST of mRNA_P-littoralis_Contig118.5.1 vs. uniprot
Match: A0A6H5KPP3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPP3_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 6.280e-52
Identity = 113/234 (48.29%), Postives = 144/234 (61.54%), Query Frame = 3

Query: 1557 RRVCQDKEVFWVDGLQPSGAEERTRAATAVRAGIGLGRGIYSIKELELALAVGRAPHEST-KESKVPGYGVTWHDTTYDNWSLQVEGEGPNPHPYTGLSGGMHVGPDAIHETNHNEQCRLDYSGISTCAHISGVCATVAEQHNSKKPVYFRSVNTMGFANFAYTLRVINEVQNEQYNKKTLGTFLGAIDGHPRHNLSICVEALWDSGRCFCAKPVMRVFDRFGRVDFVFLTAML 2255
            RR  + K  F VD L+P  AE R RAA AVR GIG GR +Y++KELEL+LA   APH +T +E KV GY   +HDT Y N+    EG+         +   M +GPD  HE NH   CR  YSG++TC  I GV  T  E  +  K +Y RS+N M F NF Y+L VINE+QN +YN++ L   L  +DGH   ++S C  ALW  GRCFC KP++RVFD FGR+D V L+ +L
Sbjct:  927 RRYAKAKVDFVVDCLKPLTAEVRERAAIAVRGGIGFGRDVYALKELELSLARNAAPHATTTEEGKVVGYDAIFHDTRYKNF----EGDP--------IKREMRIGPDGHHENNHGPDCRKLYSGLTTCKDIGGVNLTRHESDHGVKVMYLRSINNMTFPNFTYSLSVINELQNRKYNRQLLDALLSRVDGHASPSMSGCQAALWTCGRCFCDKPLVRVFDCFGRLDLVCLSFVL 1148

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BLAST of mRNA_P-littoralis_Contig118.5.1 vs. uniprot
Match: A0A6H5KXC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXC8_9PHAE)

HSP 1 Score: 199 bits (505), Expect = 1.460e-51
Identity = 104/228 (45.61%), Postives = 136/228 (59.65%), Query Frame = 3

Query: 1575 KEVFWVDGLQPSGAEERTRAATAVRAGIGL-GRGIYSIKELELALAVGRAPHESTKESKVPGYGVTWHDTTYDNWSLQVEGEGPNPHPYTGLSGGMHVGPDAIHETNHNEQCRLDYSGISTCAHISGVCATVAEQHNSKKPVYFRSVNTMGFANFAYTLRVINEVQNEQYNKKTLGTFLGAIDGHPRHNLSICVEALWDSGRCFCAKPVMRVFDRFGRVDFVFLTAML 2255
            K  F  DG+QP G +ER  A +A+  G GL G G+YSI  L++ALAV   PHES +  KV GY   W D T+D+ S +          Y     G+ VGPD  H  N +++C+  YSG +TC  ++G+     EQ +SKK +Y RS+NTM F+ F + LRV+NE QN+  N+KTL T L ++  H +   + C  ALW  GRCFC KPVMRVFD  GRVD V L  ML
Sbjct:  256 KTKFMADGVQPIGEKERKIAESAICCGTGLCGDGVYSIMALQIALAVDVPPHESAENFKVAGYDCVWQDNTFDDMSSEHV-------KYKMWQSGIFVGPDGPHAKNRSKECQRQYSGFTTCDELAGINLNPPEQDHSKKALYLRSLNTMTFSGFTFALRVLNERQNQGCNRKTLRTHLPSVTEHAKDIFASCEVALWRYGRCFCRKPVMRVFDCLGRVDIVMLATML 476

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BLAST of mRNA_P-littoralis_Contig118.5.1 vs. uniprot
Match: A0A6H5KCW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCW5_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 1.890e-45
Identity = 100/227 (44.05%), Postives = 131/227 (57.71%), Query Frame = 3

Query: 1575 KEVFWVDGLQPSGAEERTRAATAVRAGIGLGRGIYSIKELELALAVGRAPHESTKESKVPGYGVTWHDTTYDNWSLQVEGEGPNPHPYTGLSGGMHVGPDAIHETNHNEQCRLDYSGISTCAHISGVCATVAEQHNSKKPVYFRSVNTMGFANFAYTLRVINEVQNEQYNKKTLGTFLGAIDGHPRHNLSICVEALWDSGRCFCAKPVMRVFDRFGRVDFVFLTAML 2255
            K  F VDG+QP G +ER  A +A+R GIG G G++SI  L++ALAV   P ES K  +V GY   WHDTT+D+ S +          Y     G+       H T          SG +TC  ++G+     EQ +SKK +  RS+NTM F+NF + LRVINE Q++ +N+KTL T L +I  HP+ + + C   LW  GRCFC KPVMRVFD  GRVD V L  +L
Sbjct:  271 KTKFIVDGVQPIGEKERNIAESAIRCGIGCGDGMHSIMVLQIALAVDVPPRESAKNFEVAGYDCVWHDTTFDDKSSEHA-------KYKMWQSGILWAQ--THLTRRTTARSASNSGFTTCDELAGINLNPHEQDHSKKALCLRSLNTMTFSNFTFALRVINERQDQGFNRKTLRTLLASITEHPKDSFAGCEATLWRCGRCFCRKPVMRVFDCLGRVDIVMLATVL 488

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BLAST of mRNA_P-littoralis_Contig118.5.1 vs. uniprot
Match: A0A6H5L3W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3W5_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 8.900e-34
Identity = 75/219 (34.25%), Postives = 121/219 (55.25%), Query Frame = 3

Query: 1596 GLQPSGAEERTRAATAVRAGIGLGRGIYSIKELELALAVGRAPHESTKESKVPGYGVTWH---DTTYDNWSLQVEGEGPNPHPYTGLSGGMHVGPDAIHETNHNEQCRLDYSGISTCAHISGVCATVAEQHNSKKPVYFRSVNTMGFANFAYTLRVINEVQNEQYNKKTLGTFLGAIDGHPRHNLSICVEALWDSGRCFCAKPVMRVFDRFGRVDFVFL 2243
            G +P G +   RA   +R+G+G G   +S+K L++AL+         ++ K+PGY + ++     +YDN+           H Y G   G+ +GPD  HE NH   C+  + G++ C  I+G      EQ++SKK  +  SV  MGF  F + + +INE++N + N+KT    + +  GHPRH L  C + +W  GRCFC+KP+MR FD+ G++   ++
Sbjct:  359 GAEPDG-DASERAYRLIRSGVGFGVAEHSVKALQIALSSDCVGGGVGEDGKLPGYSIDFNFKRTPSYDNYG----------HFYGGKRVGLWLGPDGPHEGNHQGSCQAKFGGLTRCRQITGTNCNPHEQNHSKKIKFLPSVTGMGFDTFTFNVTLINELENVKINRKTCTLAVSSASGHPRHRLPACRKEVWSCGRCFCSKPLMRSFDKLGKLCISYM 566

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BLAST of mRNA_P-littoralis_Contig118.5.1 vs. uniprot
Match: A0A6H5JJS4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJS4_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 1.720e-26
Identity = 69/183 (37.70%), Postives = 103/183 (56.28%), Query Frame = 3

Query:  225 CSFEKVFGSVRGMLPATA-PGRNTPNLPRLDRYATALIPERLRHIWEAWFVETDGNCLWRALAKALWDCDQFWPHLKVVVLGWTAVNAGALVEDGGVLF-RCKKFYSQPVVEKYSCPADSSGLTCDAVDNALMMVLESILEFCPNKKWGGDLTALWTSEALGITVKLVVPTDMQARKKNEATG 767
            C++ KVFG+  G++P  A PG+        D  AT ++   LR  + A +VE DGNC WR++AKALW  D++W  LK+ VL W+AVN  ALV +GG LF R    +    +          G     +D+   M+LESI +F  N++WGG L  +  +E  G+ +K+  P DM+AR + + +G
Sbjct:   60 CTWPKVFGTPEGVVPTVARPGKGQE---MYDPKATMILTPELRKTFVALWVEGDGNCFWRSMAKALWGTDEYWRQLKLAVLAWSAVNVEALVGEGGALFGRAGIIHYDDEIHAKHIYRGPDGKVDHRLDDDASMLLESIAKFSANRQWGGCLAGVLFTERTGLVLKMPHPFDMRARIRADTSG 239

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BLAST of mRNA_P-littoralis_Contig118.5.1 vs. uniprot
Match: A0A6H5K454_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K454_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 4.140e-22
Identity = 68/167 (40.72%), Postives = 92/167 (55.09%), Query Frame = 3

Query:  357 WEAWFVETDGNCLWRALAKALWDCDQFWPHLKVVVLGWTAVNAGALVEDGGVLFRCKKFYSQPVVEK--YSCPADSSGLTCDAVDNALMMVLESILEFCPNKKWGGDLTALWTSEALGITVKLVVPTDMQARKKNEATGGQPGG--GTGRNGGNRDISRSSRCFRPD 845
            W A +V  DGNC WR+LAK LW+ D++W  LK+VVL W A +A  LV +G VL      +S  +     Y+  A   G    +V     M+L S+   C +  WGGD T L  S+AL ITVKL+ P D+  RK++E++   PG   G GR G   D +R S+ F  D
Sbjct:    6 WVALWVRGDGNCCWRSLAKCLWESDEYWSQLKLVVLAWAAAHAEELVSEGRVLSDFSLHFSDDIHAGLGYAYSATCVG-AAPSVAQTSRMLLASVAYDCEDTVWGGDFTLLLASQALKITVKLLSPNDVMVRKRDESSA-TPGTIRGAGRKGDKVDDTRLSQTFLAD 170

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig118.5.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig118.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8


Match Name	E-value	Identity	Description
A0A6H5KGV9_9PHAE	9.680e-60	48.46	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KPQ6_9PHAE	1.120e-54	48.54	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KPP3_9PHAE	6.280e-52	48.29	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KXC8_9PHAE	1.460e-51	45.61	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KCW5_9PHAE	1.890e-45	44.05	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L3W5_9PHAE	8.900e-34	34.25	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JJS4_9PHAE	1.720e-26	37.70	SWIM-type domain-containing protein n=1 Tax=Ectoca...	[more]
A0A6H5K454_9PHAE	4.140e-22	40.72	SWIM-type domain-containing protein n=1 Tax=Ectoca...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig118	contig	P-littoralis_Contig118:27690..32625 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Model size	2882
Hectar predicted targeting category	other localisation
Exons	4
Cds size	852

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig118.5.1	prot_P-littoralis_Contig118.5.1	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig118 30073..32566 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789493.269331-UTR-P-littoralis_Contig118:27689..28936	1680789493.269331-UTR-P-littoralis_Contig118:27689..28936	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig118 27690..28936 -
1680789493.2780666-UTR-P-littoralis_Contig118:29348..30072	1680789493.2780666-UTR-P-littoralis_Contig118:29348..30072	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig118 29349..30072 -
1680789493.3176003-UTR-P-littoralis_Contig118:32566..32625	1680789493.3176003-UTR-P-littoralis_Contig118:32566..32625	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig118 32567..32625 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789493.2868266-CDS-P-littoralis_Contig118:30072..30687	1680789493.2868266-CDS-P-littoralis_Contig118:30072..30687	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig118 30073..30687 -
1680789493.2986598-CDS-P-littoralis_Contig118:31214..31428	1680789493.2986598-CDS-P-littoralis_Contig118:31214..31428	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig118 31215..31428 -
1680789493.3073735-CDS-P-littoralis_Contig118:32543..32566	1680789493.3073735-CDS-P-littoralis_Contig118:32543..32566	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig118 32544..32566 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig118:27690..32625-
coding sequence from alignment at P-littoralis_Contig118:27690..32625-

protein sequence of mRNA_P-littoralis_Contig118.5.1

>prot_P-littoralis_Contig118.5.1 ID=prot_P-littoralis_Contig118.5.1|Name=mRNA_P-littoralis_Contig118.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=284bp
MSRKRTCRVLDEMTVEFRLSQLNDILQRTVETMRGDDVIQGKKAMAILQN
WCGENCSFEKVFGSVRGMLPATAPGRNTPNLPRLDRYATALIPERLRHIW
EAWFVETDGNCLWRALAKALWDCDQFWPHLKVVVLGWTAVNAGALVEDGG
VLFRCKKFYSQPVVEKYSCPADSSGLTCDAVDNALMMVLESILEFCPNKK
WGGDLTALWTSEALGITVKLVVPTDMQARKKNEATGGQPGGGTGRNGGNR
DISRSSRCFRPDKGQSGAYMGKKIVLWTRSLSL*

mRNA from alignment at P-littoralis_Contig118:27690..32625-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig118.5.1 ID=mRNA_P-littoralis_Contig118.5.1|Name=mRNA_P-littoralis_Contig118.5.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4936bp|location=Sequence derived from alignment at P-littoralis_Contig118:27690..32625- (Pylaiella littoralis U1_48)
GCTTGTTGGAGCATGGCGTGAGCAGCTGCTGCCGGTCCGTGGAACGAACA
ACAACAACAATGTCGCGCAAGAGGACTTGTAGGTGAGAACACGTTTTGAC
AACTGCTGTTCCACCCCGTATATAAGTATCAGTATGGACTATACTAAATA
ATAGTACTGCTTATACCATGTTGTATCAGTTGTATACATATATACTTACG
TATACTGGTGTGTATACATATATATATACGCTGGTCCTCCGCTGCTGTCG
TTGCGAGTTGCTGCTGGCTGCTGCTGCTCTATGCCAGGGTATATGCGATA
ATACTACTTGATCGAGCTGTAGAATAGTGGTAGTATACAACAGCAGCAAC
GACAGCAGTTTTTTGTACCGCTGCTGAGCTGCTGTAATCCGCGTACTGCG
TACTTATTCCTATATTAGGCCTTGCGTCACTTGCTCCCTTGTCTCCGTGT
TCTGTGCTGTAAGAAGGACAGGGTTTTTTCCGCACGACGGCGGTGGTAAT
GGTTGTACAGGAGAATGGACTGCCTCTTGCAAGAAATATATGGGATACAA
TATAGTGCCTGATGTAAACGAAAACCCGAGATTGTCTGAGATTGTCTGGG
TCGTGTACAGATAACAACGCGAGAAATTCTATGCAAGGTCGTCACCGGCG
TCCTGGAAGGCACGGCGTTGTGTGCGCATAAAATCTTGGTGAAAATGCGT
GATAAAGCATGAAAAAAAAAATCCTAAACGTCCGTATTTTGTTGTTTTTA
CAACCCACTAATTTCAAGTCAAACGGCAGACTACGATTTTCTGTAAATAT
AGTAAAGTATGACGGCAGGTACAGCTGGGTGACATGTAGACCGATCAGAG
ACCCCCCACACAGCCGGTCAGCGAGAGTTGTTGTGCCTGTCACAAGATCA
GTGCTTAACCATGCAGTGCTTGGATATGCCGAGGCCGTGTACCCTCTCTG
TCAATGAGACGATCGTACGAAGTACGAAGTGCCGGGGTATGGCACAGCAG
CACTCATGTTTGCTGGCACTCTACACTTTGATACATAGGAGAGTAACGTA
AAATCCAGGTGTCATGATACTGGTCCGAGGTCAACCGAAGTCTGCTTGCC
CTCTCCGTCTCTGTCTCACTGTCTATAACATTCAGGCTCATAGCTCATAA
TGATCAGGAAATGTGCCCTCGCGTGTGATTTGTACTCCTTCTTGTAGGGT
TTTGGATGAAATGACCGTAGAATTCAGGCTGAGCCAGCTCAATGACATAC
TGCAACGTACGGTGGAAACGATGAGAGGGGATGATGTCATACAGGGAAAG
AAGGCGATGGCGATACTGCAGAATTGGTGCGGCGAGAACTGTTCGTTTGA
GAAGGTCTTCGGCTCTGTCCGTGGGATGCTACCGGCCACCGCACCCGGCA
GGAATACGCCGGTAAGCCAATCGTTGCAACTGTGCTATCGTAAACTCTGT
TGGTGTATTTTTACGATTCCGCTCGTTTAAAGGCCACGAGGCTGGATTTG
GTTGGTTGATTGAGCTGGGTTGATTTGGTTGAGTTGGTTAGAGGGTTAAA
TGAAATTGGGTTTGTACAGGAGTGGCGTTGCGCCAAATACGAAACGGCTT
GAATATGTTACGTTAGATTGAGTCAAGCGTGTAAATATCACGGAGCGGGC
GCCCTTCCCAGCGTGGCCATCAGACATTGTGTTCGCTGTTGCCAAGGTGC
TAGTAACTTAAAATGAACCCCACCGCGTAGCGCGAATAAGAACGGTGTCA
GCGGCAACTGTTGTAATTCGTGGCTTTGTGTAGACCGCCTACCTGTTCGA
TAGAATCAATTTATTGGGAATGATTATTCCATGTTCTGGGAGGCATATTC
GTACAACAGGATTTTGTCGCGAGGCAGAGCGTTTCGCTGAACCTTTTCTG
CCCCTGCCTCCGAACCCCTGCCTCAGAACTGGATCCAGAATCTACCACGG
TTGGACCGGTACGCAACGGCGCTTATCCCAGAACGGCTGCGCCACATTTG
GGAAGCGTGGTTTGTCGAAACCGACGGAAACTGCTTGTGGCGTGCCCTCG
CCAAGGCCTTGTGGGATTGCGACCAGTTTTGGCCCCATTTGAAGGTTGTG
GTTTTAGGATGGACTGCTGTGAACGCGGGAGCCCTTGTAGAAGATGGTGG
AGTCCTTTTTCGCTGCAAGAAATTCTATTCGCAACCCGTCGTCGAGAAGT
ATTCGTGCCCCGCTGACTCAAGTGGGCTTACTTGTGATGCGGTCGACAAC
GCCCTCATGATGGTCCTGGAGTCCATCCTGGAATTTTGCCCAAATAAAAA
GTGGGGCGGAGACCTTACCGCGCTCTGGACATCTGAAGCGCTAGGCATCA
CGGTGAAATTGGTTGTTCCCACTGACATGCAGGCGCGGAAGAAGAACGAG
GCAACGGGGGGGCAACCGGGTGGAGGAACTGGTAGGAACGGGGGCAACCG
CGATATCAGTCGCAGCTCTCGTTGTTTCCGACCCGATAAGGGACAGAGTG
GCGCGTACATGGGCAAGAAGATCGTGTTGTGGACGAGGTCGCTATCGCTT
TGACGGGGGGTTGCACACGCGCGAGTTCATTCGACGTCGTACACATCCCC
GAAGTAGAGGCGGACACAGACTGCACGGGATTGTGTCACTTTGCCGCAAT
CATGACGAAGGACAAGAGCACCCGCCCGTTTCCACTCGCCGCGGCCGCGC
CCTCATTGTTCCCGGTCCACGTGAGTGTCGAATGGCGCTGGTTTTGGGGC
TGGTTTTGTTGTCGTAGGTGGTTGCTCCGTGATGTAGGGAAAGGATGGCG
TCGACCCATTATGAAGTCGTTTTATTTTGTGAATGTTATATTGTTTGGTG
AGCACTAGCGATTATTTTTGTCCGCGTAGCTTTTGAGTATTCAATGCACG
AAGAAGGCCCAAATAAGCACGACAAGGTAATCAGACCTTTCGTCGCCCCC
CTGACTTCCCATACGTGCAGGATGTGGATATGGAGGCGGCGGACGCTTCC
GAACTAGCTGGAAAAATGGTTTGTTGGCTTTTTTGCAACAGCCGTTATCA
TGGGAGATAACCATAATCTATCTTCACCAACACGTCCGTATTGACGGTCC
AGCTCGTATTGGATGAGAAATATATTATAACAATATGTAGCATGTTCGAC
GGAGGGCGATTTTGACGGCAAGTCTGCACAGTTAACCCTGTCATTTACCG
TCGTGTGTGTCAGGACAAGGAAGTCTTCTGGGTCGACGGCCTGCAGCCCA
GTGGCGCTGAAGAGAGAACACGAGCAGGTGCGCACATGTTGCGGTCCGTC
TTCATATGCAGACGGGTGTCCTGTGACTGGGGACGTGGAAATTCGTTGCG
TTGTTTTTGTCCTAGACAGACTGGCTATTTGGTTGATATGTTATGGCGGC
GCCCACGGCACCAAACGCACCATTTGTGAACTCCAACGGGGGTTGCGTGT
AGAGCAACATTTGCAGATCGATTTTGGAACTCCGCGTTAAACAAATGTTT
GTGTCGTGCTGTAGAGGTCGCACATCCAGTCCCGAGAAACAAACTACACG
AGCAATGTCACTATCTCGGCGCAGGACGGGTCAGACCGGACACGGTCAAT
ATTTTCTACCTTCGCTGCCCGCGCTCACGTCCTTGTATATATGTCTTTTA
CCTGTGACGTTTTTTGCGTTCACGTTTGCGCGATTGCAGCAACAGCGGTC
CGCGCCGGGATTGGACTCGGTCGCGGCATCTACTCGATCAAGGAGCTAGA
ACTCGCGCTGGCGGTCGGGCGAGCGCCGCACGAGAGTACTAAGGAATCCA
AGGTTCCTGGGTACGGTGTGACCTGGCACGATACGACGTACGACAACTGG
TCGCTGCAAGTTGAAGGGGAAGGGCCAAATCCCCACCCGTACACAGGTCT
ATCGGGCGGAATGCATGTAGGACCGGATGCCATCCATGAGACCAACCACA
ACGAGCAGTGTAGGCTTGACTATAGCGGCATATCGACATGTGCACACATT
AGCGGTGTTTGTGCCACCGTGGCAGAGCAGCACAACTCAAAGAAACCGGT
GTATTTCCGGTCGGTCAACACCATGGGCTTTGCTAATTTTGCCTACACGC
TTCGTGTAATCAACGAAGTCCAGAACGAACAGTACAACAAGAAAACCCTT
GGCACGTTCCTGGGGGCTATTGACGGCCACCCACGACACAACCTCTCCAT
CTGCGTGGAAGCCCTTTGGGACAGTGGGAGATGCTTTTGCGCGAAGCCTG
TCATGCGTGTGTTTGACCGCTTCGGAAGGGTGGACTTTGTCTTTCTTACC
GCTATGCTCCTGGCCTGAGTGAAAGCGGTCTCCGATAGAAGATTTGTTGA
CATTTTGATGGGTGACAGGGTTGGTAGAGTGCGACAGCACTGCACTACGT
TGAGTCGTTGACACTGGTGTGTGTGCACACAGTTTGGTGCTGAGGCACGT
TTGGGGGGAACGACATCTTCACGGTCGACGCAGAAGAATCTAGGTGGCGT
AAGCGAAAGAGAACGTACTCCGGCAGTCCATGGTAGTAACGAATGGAATC
AAATGAAAATCCATGTTGTGCACACGCGCTCGTCGAGTTTTGATTTGTGT
TACAGAGGGCCTTGGCTAGGATAACACGTATCGGTTTTGACACGTTTCAA
CGATCGATGGGCGTGAGTTTTTTTTCTCAGCTCTATGCATTCCATGCACA
CCTGCCTAAGGGGCGTGCCTCAGGATAAGAAATATCGCATGACGATCAAG
GGGTAAAACAGATTTTTTCTCCTGTAAACAATGCCAATGCGTGTCTTTGT
TTTGTCACAGCTAGATTACACATTCCACGACCCTGGTGGCTCATCAGACG
TGATGTGGAAAGTTTTGGTACCAAGTTCGATTTTATTTTTTCCACTAGGC
AATGTTTTTGCGTCGATTGAACCCGACGGTTTGGCA

Coding sequence (CDS) from alignment at P-littoralis_Contig118:27690..32625-

>mRNA_P-littoralis_Contig118.5.1 ID=mRNA_P-littoralis_Contig118.5.1|Name=mRNA_P-littoralis_Contig118.5.1|organism=Pylaiella littoralis U1_48|type=CDS|length=852bp|location=Sequence derived from alignment at P-littoralis_Contig118:27690..32625- (Pylaiella littoralis U1_48)
ATGTCGCGCAAGAGGACTTGTAGGGTTTTGGATGAAATGACCGTAGAATT
CAGGCTGAGCCAGCTCAATGACATACTGCAACGTACGGTGGAAACGATGA
GAGGGGATGATGTCATACAGGGAAAGAAGGCGATGGCGATACTGCAGAAT
TGGTGCGGCGAGAACTGTTCGTTTGAGAAGGTCTTCGGCTCTGTCCGTGG
GATGCTACCGGCCACCGCACCCGGCAGGAATACGCCGAATCTACCACGGT
TGGACCGGTACGCAACGGCGCTTATCCCAGAACGGCTGCGCCACATTTGG
GAAGCGTGGTTTGTCGAAACCGACGGAAACTGCTTGTGGCGTGCCCTCGC
CAAGGCCTTGTGGGATTGCGACCAGTTTTGGCCCCATTTGAAGGTTGTGG
TTTTAGGATGGACTGCTGTGAACGCGGGAGCCCTTGTAGAAGATGGTGGA
GTCCTTTTTCGCTGCAAGAAATTCTATTCGCAACCCGTCGTCGAGAAGTA
TTCGTGCCCCGCTGACTCAAGTGGGCTTACTTGTGATGCGGTCGACAACG
CCCTCATGATGGTCCTGGAGTCCATCCTGGAATTTTGCCCAAATAAAAAG
TGGGGCGGAGACCTTACCGCGCTCTGGACATCTGAAGCGCTAGGCATCAC
GGTGAAATTGGTTGTTCCCACTGACATGCAGGCGCGGAAGAAGAACGAGG
CAACGGGGGGGCAACCGGGTGGAGGAACTGGTAGGAACGGGGGCAACCGC
GATATCAGTCGCAGCTCTCGTTGTTTCCGACCCGATAAGGGACAGAGTGG
CGCGTACATGGGCAAGAAGATCGTGTTGTGGACGAGGTCGCTATCGCTTT
GA