prot_P-littoralis_Contig700.21.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig700.21.1
Unique Nameprot_P-littoralis_Contig700.21.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length267
Homology
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BLAST of mRNA_P-littoralis_Contig700.21.1 vs. uniprot
Match: D8LIR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIR8_ECTSI)

HSP 1 Score: 291 bits (746), Expect = 2.530e-96
Identity = 181/246 (73.58%), Postives = 203/246 (82.52%), Query Frame = 0 
Query:   21 MGVDLPEDTPSKIRARNALECAGIRRRQQEEVVKAELDTGLDLHQQMKEDRARRAGNAKADAALRRDLAARQTAHRNGIREQEAERERMEKAREQDERRATDALKELRRLELEAEKREIRQSRVERVLHSKETKSSEEALERSTVKKEYQEGLAERRRKEELEKAAKKADVEARKAAILEARDLKIKERALAASVLRAEIEHAREVAKANEAANKRTAEEHRQALRARADQYRKDKELAKTSAFSR 266
            MGVDLPEDTPSKIRAR A +CA IRRRQQEE  KAEL+TG DLHQQMK+DR RR  +AK D ALRRDL ARQ AH+ G  E EAERER  KARE+ ++RA+DALKELRR ELEAEKRE RQSR E VLHSK  K SE+A ERS  KK+Y+ GLAERR KEE  KAA+KA+ EARK A+LEARDLKIKERALAAS+LRAEIEH+RE AKA E   K+ A++HRQALRARA QYR+DKELAKTSAF+R
Sbjct:    1 MGVDLPEDTPSKIRARGAADCASIRRRQQEETAKAELETGRDLHQQMKDDRERRNAHAKGDTALRRDLLARQAAHKKGTLEIEAERERELKAREKADQRASDALKELRRQELEAEKREARQSRAETVLHSKAAKDSEQARERSLAKKDYEAGLAERRLKEEEAKAARKAEAEARKTAMLEARDLKIKERALAASLLRAEIEHSREKAKAKEVEEKKAADDHRQALRARAGQYRQDKELAKTSAFAR 246
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig700.21.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIR8_ECTSI2.530e-9673.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 179..199
NoneNo IPR availableCOILSCoilCoilcoord: 99..140
NoneNo IPR availableCOILSCoilCoilcoord: 235..262
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig700contigP-littoralis_Contig700:111392..122103 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig700.21.1mRNA_P-littoralis_Contig700.21.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig700 109686..122687 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig700.21.1 ID=prot_P-littoralis_Contig700.21.1|Name=mRNA_P-littoralis_Contig700.21.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=267bp
MSAMCTPRGKGRALLRPVTPMGVDLPEDTPSKIRARNALECAGIRRRQQE
EVVKAELDTGLDLHQQMKEDRARRAGNAKADAALRRDLAARQTAHRNGIR
EQEAERERMEKAREQDERRATDALKELRRLELEAEKREIRQSRVERVLHS
KETKSSEEALERSTVKKEYQEGLAERRRKEELEKAAKKADVEARKAAILE
ARDLKIKERALAASVLRAEIEHAREVAKANEAANKRTAEEHRQALRARAD
QYRKDKELAKTSAFSR*
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