mRNA_P-littoralis_Contig700.7.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig700.7.1
Unique NamemRNA_P-littoralis_Contig700.7.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig700.7.1 vs. uniprot
Match: D8LIS4_ECTSI (Nucleoside diphosphate kinase 7 isoform a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIS4_ECTSI)

HSP 1 Score: 478 bits (1230), Expect = 4.360e-166
Identity = 259/381 (67.98%), Postives = 297/381 (77.95%), Query Frame = 1
Query:   13 ATAPPALFPMPVGFSVEYFDPVANSLRTFVLTVFPDQRVQMVCSNNKTFLSKTYAKDLQTTDLYIGGTVSLFSRELSIVDYADKSTRKYFEVTQSKGFVMVLPSAMGSLGEVCGDDERKAGSIG--RAPSVITNAKMFRPNGKFCRPEEPPAALEDALPESGPVLALEIVAESRHGGFEGLLGVVNGLRQRYGGGVFASSTPAEASEHARYIFRQEPTGQNQQPNGGKNNSKNNEQECTLCVVKPHIVRGGRLGAVLSFVVQRGFEVADLQMLYLGEVGTEELLRPYRGVVPYHADAVRHLKSGPC------GGHDVVEEFREACGPSDPEVAKALYPDSLRALLGVQQATNAVHCTDMTEDGLLECNYMFGVVAKDRYGA 1131
            +T  PALFP PVGFSVEYFDPVA SLR+FVLTVFPD++VQMVC N KTFLSKTYAKDL TTDLYIGGTV LFSRELSIVDYAD+STRKY+E TQ++GFV+VLPS +  LG+V    +   G  G  R PSVI+NAKMFR  G+  R  E P    D +P+SG  +ALE++ +SR  GFEGLLGVV   R+R GG VFASSTPA+A+E AR +F+    G  QQP        N E+ CTLCVVKPHIVR G+LG +L+ V +RGFEV  +QM++LGEVG EELLRPYRGVV YHADAVRHLKSG C       G DVVEEFREACGP+DPEVA+ALYPD+LRALLGVQQATNAVHCTD+ EDGLLEC YMFGV+AKDR GA
Sbjct:    3 STNAPALFPKPVGFSVEYFDPVAKSLRSFVLTVFPDRKVQMVCGN-KTFLSKTYAKDLVTTDLYIGGTVVLFSRELSIVDYADESTRKYYESTQTRGFVVVLPSMVRYLGDVISCLQDGGGCEGNRRCPSVISNAKMFRLEGREKRRSELPVPDID-MPQSGAAVALEVILDSRDRGFEGLLGVVEKWREREGG-VFASSTPAQAAEDARQMFQSNGGGVEQQPA-----DDNGERACTLCVVKPHIVRDGKLGGLLALVSERGFEVTGMQMMHLGEVGAEELLRPYRGVVSYHADAVRHLKSGNCVALRLEKGEDVVEEFREACGPADPEVARALYPDTLRALLGVQQATNAVHCTDLPEDGLLECQYMFGVLAKDRQGA 375          
BLAST of mRNA_P-littoralis_Contig700.7.1 vs. uniprot
Match: A0A6P3DGA9_BOMTE (nucleoside diphosphate kinase 7 n=5 Tax=Bombus TaxID=28641 RepID=A0A6P3DGA9_BOMTE)

HSP 1 Score: 194 bits (494), Expect = 5.210e-55
Identity = 125/386 (32.38%), Postives = 193/386 (50.00%), Query Frame = 1
Query:   52 FSVEYFDPVANSLRTFVLTVFP-DQRVQMV-CSNNKTFLSKTYAKDLQTTDLYIGGTVSLFSRELSIVDYADKSTRKYFEVTQSKGFVMVLPSAMGSLGEVCGDDERKAGSIGRAPSVITNAKMFRPNGK-----FCRPEEPPAALEDALPESGPVLALEIVAESRHGGFEGLLG----------VVNGLRQRYG-----GGVFASSTPAEASEHARYIFRQEPTGQNQQPNGGKNNSKNNE--QECTLCVVKPHIVRGGRLGAVLSFVVQRGFEVADLQMLYLGEVGTEELLRPYRGVVPYHADAVRHLKSGPC---------GGHDVVEEFREACGPSDPEVAKALYPDSLRALLGVQQATNAVHCTDMTEDGLLECNYMFGVV 1110
            F  E++D +A  L+ F L  +P D  V++    N KTFL +T  + +Q  D Y+G TV++FSR + I DYAD +TR   +    K F MV P+ +  LGE+          I  +   I N KM R + +     +   EEP  A       SGP++ALE++ +     ++ ++G            + LR  YG       V+ S     A +  ++ F          P  GK    N    + CT C++KPH+V+   +G ++  V + G+ ++ +Q  ++     EE L  Y+GV+P +A  V  L+SGPC           HDV  EFR+ CGP DP++A+ + PD+LRA  G  +  NAVHC+D+ EDG+LE  Y F ++
Sbjct:   11 FEAEWYDKIACVLKKFYLYYYPFDNTVELFDIKNRKTFLRRTKCEGIQAKDFYVGATVTIFSRSIRITDYADCTTRIKLQTKMQKTFAMVKPTVVDKLGEILKH-------IIASQFHIANIKMVRLSQEEATDLYRDKEEPNIAYIVNYLTSGPIVALELLGDHAITRWQEVMGPEDPREAVAKAPSSLRACYGKDNIVNAVYGSDNEETAEKELQFFFPN--------PKSGKKGPVNTATLENCTCCIIKPHVVQAKLIGNIIDDVQKAGYTISAVQQFFVNLFDAEEFLEVYKGVLPDYAAMVGELQSGPCIVMEIKHKEEKHDVQGEFRKLCGPMDPDIARQVRPDTLRAKYGKTKVQNAVHCSDLPEDGILEVEYFFKIL 381          
BLAST of mRNA_P-littoralis_Contig700.7.1 vs. uniprot
Match: A0DYI7_PARTE (Nucleoside diphosphate kinase n=4 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0DYI7_PARTE)

HSP 1 Score: 192 bits (487), Expect = 4.600e-54
Identity = 123/385 (31.95%), Postives = 189/385 (49.09%), Query Frame = 1
Query:   52 FSVEYFDPVANSLRTFVLTVF-PDQRVQMV-CSNNKTFLSKTYAKDLQTTDLYIGGTVSLFSRELSIVDYADKSTRKYFEVTQSKGFVMVLPSAMGSLGEVCGDDERKAGSIGRAPSVITNAKMFRP---NGKFCRPEEPPAALEDALPE---SGPVLALEIVAESRHGGFEGLLGVV----------NGLRQRYG-----GGVFASSTPAEASEHARYIFRQEPTGQNQQPNGGKNNSKNNE--QECTLCVVKPHIVRGGRLGAVLSFVVQRGFEVADLQMLYLGEVGTEELLRPYRGVVPYHADAVRHLKSGPCGGHDV-----VEEFREACGPSDPEVAKALYPDSLRALLGVQQATNAVHCTDMTEDGLLECNYMFGVVAK 1116
            F VE+FD  A+ +R++ L  F  D+ ++M    N + FL +     +Q  DLY+G  V++FSR+L IVDYAD  TR  FEV + K F M+ P A   +G++    E+          VI N KM R    + +    E       D L +   S  ++ LE++A++    +  L+G            N +R  YG          S  P  A     + F              K+N K+      CT  ++KPH++  GR G ++  ++  GFE++ +QM YL    +EE    Y+GV+P       HL SGPC   ++     V+ FR+ CGP DPE+A+ L P ++RA  G+ +  NA+HCTD+ EDG+LE  Y F ++ +
Sbjct:   10 FIVEWFDTSASLIRSYNLIYFMADKTIEMFDLKNKRIFLKRCEYPSVQLKDLYVGSIVTVFSRQLKIVDYADVFTRSKFEVQRGKTFGMIKPDAYTHIGKIITAVEKNG-------FVIGNLKMTRMQIGDAQQFYGEHRGKPFFDELTQFICSDFIVGLELIADNSVKKWRDLIGPTKCQVARVEAPNSMRALYGTEGVRNACHGSDAPGSAQRELDFFF------------SDKSNLKSTAVFNNCTCAIIKPHVILEGRAGQIIDIILSEGFEISAMQMFYLDRATSEEFFEVYKGVLPEFQAMSEHLTSGPCIAMEIRQENAVKSFRDLCGPHDPEIARTLRPQTIRAKFGIDRVKNAIHCTDLQEDGILEVEYFFNILQQ 375          
BLAST of mRNA_P-littoralis_Contig700.7.1 vs. uniprot
Match: A0A6H5K1E0_9PHAE (NDK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1E0_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 4.830e-54
Identity = 87/112 (77.68%), Postives = 97/112 (86.61%), Query Frame = 1
Query:  814 LQMLYLGEVGTEELLRPYRGVVPYHADAVRHLKSGPC------GGHDVVEEFREACGPSDPEVAKALYPDSLRALLGVQQATNAVHCTDMTEDGLLECNYMFGVVAKDRYGA 1131
            +QM++LGEVG EELLRPYRGVVPYHADAVRH KSG C       G DVVEEFREACGP+DPEVA+ALYP +LRALLGVQQATNAVHCTD+ EDGLLEC YMFG++AK+R GA
Sbjct:    1 MQMVHLGEVGAEELLRPYRGVVPYHADAVRHFKSGNCMALRLEKGEDVVEEFREACGPADPEVARALYPHTLRALLGVQQATNAVHCTDLPEDGLLECQYMFGILAKERQGA 112          
BLAST of mRNA_P-littoralis_Contig700.7.1 vs. uniprot
Match: A0A1S3F4U5_DIPOR (Nucleoside diphosphate kinase 7 n=10 Tax=Heteromyidae TaxID=10015 RepID=A0A1S3F4U5_DIPOR)

HSP 1 Score: 188 bits (478), Expect = 9.790e-53
Identity = 130/378 (34.39%), Postives = 191/378 (50.53%), Query Frame = 1
Query:   52 FSVEYFDPVANSLRTFVLTVFP-DQRVQMV-CSNNKTFLSKTYAKDLQTTDLYIGGTVSLFSRELSIVDYADKSTRKYFEVTQSKGFVMVLPSAMGSLGEVCGDDERKAGSIGRAPSVITNAKMF---RPNGKFCRPEEPPAALEDALPE---SGPVLALEIVAESRHGGFEGLLGVVNG----------LRQRYGGGVF--ASSTPAEASEHARYIFRQEPTGQNQQPNGGKNNSKNNEQECTLCVVKPHIVRGGRLGAVLSFVVQRGFEVADLQMLYLGEVGTEELLRPYRGVVPYHADAVRHLKSGPCGGHDVVEE-----FREACGPSDPEVAKALYPDSLRALLGVQQATNAVHCTDMTEDGLLECNYMFGVV 1110
            F  E++DP A+ LR + L  +P D  V+M    N +TFL +T   DL   DL+IG  V++FSR+L +VDY D+ T +     + K   ++ P A+   GE+          I +A   IT  KM    R  G     +     L   L +   SGPV+A+E++ +     ++ LLG  N           +R  YG      A+  P   +  AR +    P+    +P    N +K     CT C+VKPH +  G LG +L  +   GFEV+ +QM  + +V  EE    Y+GVV  + + V  + SGPC   ++ +      FRE CGP+DPE+A+ L PD+LRA+ G  +  NAVHCTD+ EDGLLE  Y F ++
Sbjct:    9 FIAEWYDPNASLLRRYDLFFYPADGSVEMHDLKNRRTFLKRTKYDDLHVEDLFIGNKVNVFSRQLVLVDYGDQYTSRQLGSRKEKTLALIKPDAVPKAGEIIE-------MINKAGFTITKLKMMKLSRKEGSDFHVDHQGRPLYSELIQFITSGPVIAMEVLRDDAISEWKRLLGPANSEVARADAPGSIRALYGADSIRNAAHGPDSFASAAREMELFFPSSGGCRP---ANTAK--FTNCTCCIVKPHAISEGLLGKILMSIRDGGFEVSAMQMFNMDQVNVEEFYEVYKGVVTDYNEMVTEMYSGPCVALEIQQSNPAKTFREFCGPADPEIARHLRPDTLRAIFGKTKIRNAVHCTDLPEDGLLEVQYFFKIL 374          
BLAST of mRNA_P-littoralis_Contig700.7.1 vs. uniprot
Match: UPI0007719926 (nucleoside diphosphate kinase 7 isoform X1 n=2 Tax=Cephus cinctus TaxID=211228 RepID=UPI0007719926)

HSP 1 Score: 189 bits (479), Expect = 1.120e-52
Identity = 128/385 (33.25%), Postives = 193/385 (50.13%), Query Frame = 1
Query:   52 FSVEYFDPVANSLRTFVLTVFP-DQRVQMV-CSNNKTFLSKTYAKDLQTTDLYIGGTVSLFSRELSIVDYADKSTRKYFEVTQSKGFVMVLPSAMGSLGEVCGDDERKAGSIGRAPSV-ITNAKMFRPNGKFCRPEEPPAALEDALPESGPVLALEIVAESRHGGFEGLLG-------VVNG---LRQRYGGGVFASSTPAEASEHA-----RYIFRQEPTGQNQQPNGGKNNSKNNE--QECTLCVVKPHIVRGGRLGAVLSFVVQRGFEVADLQMLYLGEVGTEELLRPYRGVVPYHADAVRHLKSGPCGGHD---------VVEEFREACGPSDPEVAKALYPDSLRALLGVQQATNAVHCTDMTEDGLLECNYMFGVVAKD 1119
            F  E+FD VA+ LR F L  +P D  V++      KTFL ++  + L+  DLYIGG V +FSR + I D+ D +TR     T  +    + P+ +  +GE+          IG    V +TN +            E P  L+  +  SGP++ALE++ E+    +  L+G       V +G   LR RYG     +S     SE A      + F Q        P   +   KN    + CT CV+KPH V+   +G +++ + Q G++++ +Q  Y+     EE L  Y+GV+P +   V  L+SGPC   +         V+ EFR+ CGP DPE+A+ L P +LRA  G  +  NAVHC+D+ EDGLLE  Y F ++A++
Sbjct:   21 FEAEWFDNVASVLRKFYLYYYPADNTVELFDVKTKKTFLRRSKCEGLEAKDLYIGGVVKIFSRCMKITDFGDSATRSKLASTMQRTCATLKPNVIDKMGEILKYITNHDIHIGNIKMVALTNEEAADFYSHLRGHNELPFILDYMI--SGPIVALELIGENCIKKWRELIGAETSSVSVESGKTSLRARYGQDSIHNSLHGSDSEEAAEREINFFFSQ--------PKSRRKGPKNTAVYKNCTCCVIKPHAVQARLIGDIINDIQQEGYKISAVQQFYIDPTNAEEFLEVYKGVLPDYNAMVAELQSGPCVAMEITHADESINVLTEFRKLCGPMDPEIARQLRPHTLRAKYGKTKIQNAVHCSDIPEDGLLEVEYFFKILAEE 395          
BLAST of mRNA_P-littoralis_Contig700.7.1 vs. uniprot
Match: J9HLV5_9SPIT (Nucleoside diphosphate kinase n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9HLV5_9SPIT)

HSP 1 Score: 187 bits (475), Expect = 3.150e-52
Identity = 117/380 (30.79%), Postives = 196/380 (51.58%), Query Frame = 1
Query:   52 FSVEYFDPVANSLRTFVLTVFP-DQRVQMVCSNNKT-FLSKTYAKDLQTTDLYIGGTVSLFSRELSIVDYADKSTRKYFEVTQSKGFVMVLPSAMGSLGEVCGD---DERKAGSIGRAPSVITNAKMF--RPNGKFCRPEEPPAALEDALPESGPVLALEIVAESRHGGFEGLLGVVN----------GLRQRYG-----GGVFASSTPAEASEHARYIFRQEPTGQNQQPNGGKNNSKNNEQECTLCVVKPHIVRGGRLGAVLSFVVQRGFEVADLQMLYLGEVGTEELLRPYRGVVPYHADAVRHLKSGPCGG-----HDVVEEFREACGPSDPEVAKALYPDSLRALLGVQQATNAVHCTDMTEDGLLECNYMFGVV 1110
            F  E++D  A+ +R + +T +P DQ V+M    NK  FL ++    +   DL+IG  +++ +R+L IV+Y D +TRK FEV + + F M+ P A  ++G++      +  K   +  +      A +F     GK   P      L++ +  S  V+ +E++AE+    +  L+G  N           LR  +G       V  S +     +   + F  EP  +  +     +N       CTLC++KPHIV+ G+ G ++  ++Q GFE++ ++M +L +   +E    Y+GV+P +   + HL SGPC        +VV+ FR   GP DPE+AK L P+++RA  G  +  NA+HCTD+ EDG++EC Y F ++
Sbjct:   12 FETEWYDQQASLIRQYRVTYYPGDQTVEMYDIKNKRGFLKRSPQSGINMKDLHIGAIMTIQTRQLKIVEYGDVATRKRFEVDRQRTFAMIKPDAYTNMGKIIDAIYLNGFKIAKLKMSRFTPATASVFYGEHKGKPFFPN-----LQNFI-TSDVVVGMELIAENAIEKWRELIGPTNTLTAKQQAPESLRAFFGTDGTKNAVHGSDSNGSVKKETAFWFEGEPRDRAMKTTAQLSN-------CTLCIIKPHIVQAGQAGMLIDLILQEGFEISAMEMFHLNKAYVQEFYDVYKGVLPEYVPLIEHLSSGPCIALEIRQENVVQAFRALVGPHDPEIAKYLRPNTIRAKFGTDRVRNAIHCTDLAEDGVVECEYFFNIL 378          
BLAST of mRNA_P-littoralis_Contig700.7.1 vs. uniprot
Match: A0A6J2WTE4_CHACN (Nucleoside diphosphate kinase 7 n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2WTE4_CHACN)

HSP 1 Score: 186 bits (473), Expect = 5.090e-52
Identity = 121/381 (31.76%), Postives = 187/381 (49.08%), Query Frame = 1
Query:   52 FSVEYFDPVANSLRTFVLTVFP-DQRVQMV-CSNNKTFLSKTYAKDLQTTDLYIGGTVSLFSRELSIVDYADKSTRKYFEVTQSKGFVMVLPSAMGSLGEVCGDDERKAGSIGRAPSVITNAKMFRPNGK----FCRPEEPPAALEDALP--ESGPVLALEIVAESRHGGFEGLLGVVNG----------LRQRYG-----GGVFASSTPAEASEHARYIFRQEPTGQNQQPNGGKNNSKNNEQECTLCVVKPHIVRGGRLGAVLSFVVQRGFEVADLQMLYLGEVGTEELLRPYRGVVPYHADAVRHLKSGPC-----GGHDVVEEFREACGPSDPEVAKALYPDSLRALLGVQQATNAVHCTDMTEDGLLECNYMFGVV 1110
            F  E++DP A  LR + L  +P D  V+M    N +TFL +T   D++   L++G  V++FSR+LS+VDY D+ T       + +   M+ P A+  +G++          I  A  ++T AKM +   K    F    +  +   + +    SGPV+ +E++ +     +  +LG  +           LR R+G          S + A A+    ++F   P        G   ++     +CT CV+KPH V     G +L+ + + GFE++ LQM  +     EE L  Y+GVV  +   V  L +GPC      G D    FRE CGP+DPE+A+ L P +LRAL G  +  NAVHCTD+ EDG+LE  Y F ++
Sbjct:    7 FLAEWYDPSAALLRRYQLLYYPRDGSVEMFDVKNQRTFLRRTKYDDIKLEHLFVGNRVNVFSRQLSLVDYGDQYTANKLGSKKERTLAMIKPDAVTKIGDI-------VQMIYDADLIVTKAKMTKLTWKQAADFYAEHQSKSFFNNLVQFVTSGPVVTMELMGDEAVSAWRKILGPTDSGVARKEAPSSLRARFGTDGTKNAGHGSDSLASAARELEFLFPSTP--------GCSTSNTATFSDCTCCVIKPHAVAEALTGKILNSITEAGFEISALQMFNMDRANAEEFLEVYKGVVTEYTGMVTELCAGPCVALEIRGTDAPRTFREFCGPADPEIARHLRPSTLRALYGKTKVQNAVHCTDLPEDGILEVQYFFKIL 372          
BLAST of mRNA_P-littoralis_Contig700.7.1 vs. uniprot
Match: UPI00062662F5 (nucleoside diphosphate kinase 7 n=1 Tax=Orussus abietinus TaxID=222816 RepID=UPI00062662F5)

HSP 1 Score: 186 bits (472), Expect = 8.930e-52
Identity = 127/379 (33.51%), Postives = 187/379 (49.34%), Query Frame = 1
Query:   52 FSVEYFDPVANSLRTFVLTVFP-DQRVQMVCSN-NKTFLSKTYAKDLQTTDLYIGGTVSLFSRELSIVDYADKSTRKYFEVTQSKGFVMVLPSAMGSLGEVCGDDERKAGSIGRAPSVITNAKMFRPNGKFCRPEEPPAALEDALPESGPVLALEIVAESRHGGFEGLLGVVNGLRQR----------YGG----GVFASSTPAEASEHARYIFRQEPTGQNQQPNGGKNNSKNNEQECTLCVVKPHIVRGGRLGAVLSFVVQRGFEVADLQMLYLGEVGTEELLRPYRGVVPYHADAVRHLKSGPC---------GGHDVVEEFREACGPSDPEVAKALYPDSLRALLGVQQATNAVHCTDMTEDGLLECNYMFGVVA 1113
            F  E++D ++  L+TF L  +P D  V++      K FL ++    L+  D ++GG V++FSR L I+DYAD+ST+K    +  +   M+ P  M  +GE+          IG    V    +  R   K  R     + +++ +  SG VL LE++ E+    +  LLG  + L  R          YG       F  S  +EA+E     F  +P    Q P           Q+CT CV+KPH V+ G +G ++  + + GF+++ LQ  Y+     EE L  Y+GV+P +   V  L+SGPC            DV  EFR+ CGP D E+AK L P SLRA  G  +  NAVHC+D+ EDGLLE  Y F ++A
Sbjct:    9 FEAEWYDKMSCILKTFYLYFYPIDNSVELFDRKARKVFLRRSKCDGLEAKDFFVGGMVNIFSRNLKILDYADESTKKKLASSMQRTCAMLKPDVMDKMGEILKKITYHNFHIGNIKMVHLTREQARELYKD-RANYKASDIQNFM-ASGLVLVLELLGENAISKWVELLGPEDPLEAREKSPASFRACYGTDFIRNAFHGSANSEAAEKELNFFFPDPKKGQQGPQDTVT-----LQKCTCCVIKPHAVQAGHIGDIIEDIQKAGFKISALQQFYVDPTNAEEFLEVYKGVLPDYGAMVAELQSGPCIAMEITHKDQSVDVPIEFRQLCGPMDAEIAKQLRPQSLRAKYGKSKVQNAVHCSDLPEDGLLEVEYFFKILA 380          
BLAST of mRNA_P-littoralis_Contig700.7.1 vs. uniprot
Match: A0A7L1H180_9PICI (NDK7 kinase (Fragment) n=12 Tax=Neognathae TaxID=8825 RepID=A0A7L1H180_9PICI)

HSP 1 Score: 186 bits (471), Expect = 1.220e-51
Identity = 121/375 (32.27%), Postives = 188/375 (50.13%), Query Frame = 1
Query:   52 FSVEYFDPVANSLRTFVLTVFP-DQRVQMV-CSNNKTFLSKTYAKDLQTTDLYIGGTVSLFSRELSIVDYADKSTRKYFEVTQSKGFVMVLPSAMGSLGEVCGDDERKAGSIGRAPSVITNAKMFRPNGK----FCRPEEPPAALEDALP--ESGPVLALEIVAESRHGGFEGLLGVVNG----------LRQRYG-----GGVFASSTPAEASEHARYIFRQEPTGQNQQPNGGKNNSKNNEQ--ECTLCVVKPHIVRGGRLGAVLSFVVQRGFEVADLQMLYLGEVGTEELLRPYRGVVPYHADAVRHLKSGPCGGHDVVEE-----FREACGPSDPEVAKALYPDSLRALLGVQQATNAVHCTDMTEDGLLE 1086
            F+ E++DP A+  R + L  +P D+ V+M    N++TFL +T  + L   DL++G  +++FSR+L+I+DY D+ T +     + +   ++ P AM  LGE+          I  A   IT AKM   + K    F    +      + L    SGP++A+EI+ +     ++ LLG  N           +R  +G            T A A++     F          P+ G     N+ +   CT C++KPH V  G  G ++  ++  GF+++ LQM  +     EE    Y+GVVP + D V  L SGPC   ++++      FR+ CGPSDPE+A+ L P +LRA+ G  +  NAVHCTD+ EDGLLE
Sbjct:   10 FTAEWYDPNASLFRRYELLYYPKDRSVEMYDVKNHRTFLKRTKYESLHLEDLFVGNKITVFSRQLAILDYGDQYTARKLGSRKERTLALIKPDAMPKLGELID-------IIINAGFTITKAKMMMLSRKEAADFYVDHQSKPFYNELLQFITSGPIVAMEILGDDAVCKWKTLLGPANSAVAQADAPDNIRVNFGHNGLRNAAHGPDTVASAAQELELFF----------PSSGGCGPVNSAKFTNCTCCIIKPHAVNEGLAGKIIKAIINEGFQISALQMFNMERTNVEEFYEIYKGVVPEYVDMVTELCSGPCIAMEIIQPEPPKVFRDFCGPSDPEIARVLRPGTLRAVFGKNKIQNAVHCTDLPEDGLLE 367          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig700.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIS4_ECTSI4.360e-16667.98Nucleoside diphosphate kinase 7 isoform a n=1 Tax=... [more]
A0A6P3DGA9_BOMTE5.210e-5532.38nucleoside diphosphate kinase 7 n=5 Tax=Bombus Tax... [more]
A0DYI7_PARTE4.600e-5431.95Nucleoside diphosphate kinase n=4 Tax=Paramecium t... [more]
A0A6H5K1E0_9PHAE4.830e-5477.68NDK domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A1S3F4U5_DIPOR9.790e-5334.39Nucleoside diphosphate kinase 7 n=10 Tax=Heteromyi... [more]
UPI00077199261.120e-5233.25nucleoside diphosphate kinase 7 isoform X1 n=2 Tax... [more]
J9HLV5_9SPIT3.150e-5230.79Nucleoside diphosphate kinase n=1 Tax=Oxytricha tr... [more]
A0A6J2WTE4_CHACN5.090e-5231.76Nucleoside diphosphate kinase 7 n=1 Tax=Chanos cha... [more]
UPI00062662F58.930e-5233.51nucleoside diphosphate kinase 7 n=1 Tax=Orussus ab... [more]
A0A7L1H180_9PICI1.220e-5132.27NDK7 kinase (Fragment) n=12 Tax=Neognathae TaxID=8... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig700contigP-littoralis_Contig700:35134..48039 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LIS4
Preferred nameNME7
PFAMsDUF1126,NDK
Model size1134
Max annot lvl2759|Eukaryota
KEGG rclassRC00002
KEGG koko:K00940,ko:K02154
KEGG TC3.A.2.2
KEGG ReactionR00124,R00139,R00156,R00330,R00570,R00722,R01137,R01857,R02093,R02326,R02331,R03530,R11894,R11895
KEGG Pathwayko00190,ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,ko04142,ko04145,ko04721,ko04966,ko05110,ko05120,ko05152,ko05165,ko05323,map00190,map00230,map00240,map00983,map01100,map01110,map01130,map04016,map04142,map04145,map04721,map04966,map05110,map05120,map05152,map05165,map05323
KEGG ModuleM00049,M00050,M00052,M00053,M00160
Hectar predicted targeting categoryother localisation
GOsGO:0003002,GO:0003341,GO:0003351,GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005929,GO:0006139,GO:0006165,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006928,GO:0006996,GO:0007017,GO:0007018,GO:0007154,GO:0007165,GO:0007166,GO:0007224,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009132,GO:0009141,GO:0009142,GO:0009799,GO:0009855,GO:0009987,GO:0010033,GO:0010970,GO:0015630,GO:0015949,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0023052,GO:0030030,GO:0030705,GO:0031503,GO:0032501,GO:0032502,GO:0033036,GO:0034097,GO:0034613,GO:0034641,GO:0034654,GO:0036064,GO:0042073,GO:0042221,GO:0042995,GO:0043113,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044782,GO:0046483,GO:0046907,GO:0046939,GO:0048513,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051668,GO:0051716,GO:0055086,GO:0060322,GO:0060830,GO:0060972,GO:0065007,GO:0070727,GO:0070887,GO:0071310,GO:0071345,GO:0071704,GO:0071840,GO:0072657,GO:0090407,GO:0099111,GO:0120025,GO:0120036,GO:0120038,GO:1901293,GO:1901360,GO:1901362,GO:1901576,GO:1990823,GO:1990830
Exons9
Evalue7.15e-167
EggNOG OGsCOG0105@1|root,KOG0888@2759|Eukaryota
Ec32 ortholog descriptionNucleoside diphosphate kinase
Ec32 orthologEc-03_001380.1
EC2.7.4.6
DescriptionNucleoside diphosphate kinase
Cds size1134
COG categoryF
BRITEko00000,ko00001,ko00002,ko01000,ko04131,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig700.7.1prot_P-littoralis_Contig700.7.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig700 35134..48039 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791467.5459185-CDS-P-littoralis_Contig700:35133..352681680791467.5459185-CDS-P-littoralis_Contig700:35133..35268Pylaiella littoralis U1_48CDSP-littoralis_Contig700 35134..35268 +
1680791467.560618-CDS-P-littoralis_Contig700:35999..360881680791467.560618-CDS-P-littoralis_Contig700:35999..36088Pylaiella littoralis U1_48CDSP-littoralis_Contig700 36000..36088 +
1680791467.5747037-CDS-P-littoralis_Contig700:36833..369621680791467.5747037-CDS-P-littoralis_Contig700:36833..36962Pylaiella littoralis U1_48CDSP-littoralis_Contig700 36834..36962 +
1680791467.5855606-CDS-P-littoralis_Contig700:37508..376411680791467.5855606-CDS-P-littoralis_Contig700:37508..37641Pylaiella littoralis U1_48CDSP-littoralis_Contig700 37509..37641 +
1680791467.6020856-CDS-P-littoralis_Contig700:38207..383391680791467.6020856-CDS-P-littoralis_Contig700:38207..38339Pylaiella littoralis U1_48CDSP-littoralis_Contig700 38208..38339 +
1680791467.6134737-CDS-P-littoralis_Contig700:38775..389611680791467.6134737-CDS-P-littoralis_Contig700:38775..38961Pylaiella littoralis U1_48CDSP-littoralis_Contig700 38776..38961 +
1680791467.6310468-CDS-P-littoralis_Contig700:39380..395001680791467.6310468-CDS-P-littoralis_Contig700:39380..39500Pylaiella littoralis U1_48CDSP-littoralis_Contig700 39381..39500 +
1680791467.642778-CDS-P-littoralis_Contig700:47241..473521680791467.642778-CDS-P-littoralis_Contig700:47241..47352Pylaiella littoralis U1_48CDSP-littoralis_Contig700 47242..47352 +
1680791467.6535928-CDS-P-littoralis_Contig700:47940..480391680791467.6535928-CDS-P-littoralis_Contig700:47940..48039Pylaiella littoralis U1_48CDSP-littoralis_Contig700 47941..48039 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig700.7.1

>prot_P-littoralis_Contig700.7.1 ID=prot_P-littoralis_Contig700.7.1|Name=mRNA_P-littoralis_Contig700.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=378bp
MAKPATAPPALFPMPVGFSVEYFDPVANSLRTFVLTVFPDQRVQMVCSNN
KTFLSKTYAKDLQTTDLYIGGTVSLFSRELSIVDYADKSTRKYFEVTQSK
GFVMVLPSAMGSLGEVCGDDERKAGSIGRAPSVITNAKMFRPNGKFCRPE
EPPAALEDALPESGPVLALEIVAESRHGGFEGLLGVVNGLRQRYGGGVFA
SSTPAEASEHARYIFRQEPTGQNQQPNGGKNNSKNNEQECTLCVVKPHIV
RGGRLGAVLSFVVQRGFEVADLQMLYLGEVGTEELLRPYRGVVPYHADAV
RHLKSGPCGGHDVVEEFREACGPSDPEVAKALYPDSLRALLGVQQATNAV
HCTDMTEDGLLECNYMFGVVAKDRYGA*
back to top

mRNA from alignment at P-littoralis_Contig700:35134..48039+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig700.7.1 ID=mRNA_P-littoralis_Contig700.7.1|Name=mRNA_P-littoralis_Contig700.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=12906bp|location=Sequence derived from alignment at P-littoralis_Contig700:35134..48039+ (Pylaiella littoralis U1_48)
ATGGCCAAACCTGCCACTGCGCCGCCAGCGTTGTTCCCCATGCCGGTCGG TTTCTCGGTGGAGTACTTCGACCCTGTGGCGAATTCGCTACGGACCTTCG TGCTGACCGTCTTTCCCGACCAACGGGTTCAGATGGTGAGAGAGAGAAAG AGAGGGGGGATGAATACTGTAAGGGAAATACCCCCCCCCCCCAACAAAAA CGCTGTGGGGAGCACCTGCTCAATACAATGGGCAAAGTTTAGTGCCACGG GTAGTTGTTCGCCGCGCATGTTGTCACCCGGACAGATCATCACACCCTTA CAACAAACAGTAAGTTTCGCTGCAACGAATGATCTGCTGACTCGGCTGTA GTACCCCCCTCTTGTTCGAGAGGCCAGCCGTACAGCAGTGTTCGACTACT ACTACAGGTACATTATGGCGTTTGCTGCCCTTCCGCCAAAAGCGTCATTA TGCTGATTTTTGTCTCCCTGACTCAACTCTTCTACTCGTAATGGAGATGA AAGTCTACTTTTCGCTACACACAGCACAAAACAATGCAGCACGAACACGA GTTGCATAGATCAAACGTGATATGGCTGATATTTCGGCGCAAGCATGCCG TGTGCCTTTTCTCGAGTCATCTCGGCTGCTTCAGTACAGATAATCTGGCT GGATTTTGTATTTGTGTTTGCTTTCTCCCCTCGACCTCTTTCGTCTGTTC CCCCTTTGTGAAACCCATCATGTAATAGAACTACTGACTAAAACGCAGTG ACCATATGTAACTTGCAACACACTTGCTGTAGGTCACTTTTCATATCAGG CCCACTTACCTGTATGAGTGTCACTCATTCCCCTTCTCATTTCCTTTCCT CTTTACGAAAAAACAGGTTTGCAGCAACAACAAGACATTTCTTTCTAAGA CTTACGCTAAAGATCTCCAAACGACCGACCTCTACATTGGAGGCACCGTA TCCCTGTAAGGAAAAGCATACAAATTGAAATGTCCGCCACTCTCCTCGCT GCATGGGGACTTCATATTTAACCAAAAAGAACGGAGATTCTTGTTCCAAC ATGCGCCATATTTATTCCAAACTTTTCGTGAATAGCACACGCTGTGTTTA CCGCGCTCCCAAGCCAGCAGGCTGCCTGTTTTAGACAAACACGGTGGAAC CGTGAAAATGGCGGAGGTTTCATTACAATCAGCAACATTGAAGCTTTTTT TATTTTCCCTGTTTGGAGCCATCGATGTGGCCACTGCTGTTCTACTGCAG TTGGTGGAAATCGTGTCTGCATCTATCGACAAAAAAACAAGTTGTCAACC CATCAATCCGGTTCCACCAGCCGAACAGGAGATACTTTTTTTTCCGGGAG TTCTTTTCTCAACCACCTCTGGTGTCATGCGTTGACACAAAATATCGAGT GCTCCAAAAGGGCCTGTTGGAAACGTACAGAAGTCGTTCGAAAGGCCCCA AAAGAGTTTAGCCAAAAGGGAGAAATAGCAGCATGTCCAACCAACAAACG CAAACCGAAGCACACAGAAATACCACACATTCATCACCAATAGCACCAAT ATCAACACCGGTAACAACGTCTTTACATATTCTACAAATCAATACATCGA CAACTCAACAACTTTTGACCTGCTCCTGCGATAATAGCATCTCGCTCCCA TTTTCCATTCTATATTGTTCGAACAAAAACTGATAAAAAAAAACTGACAG CTTTTCTCGCGAGCTGAGCATCGTCGACTACGCGGACAAAAGCACCAGGA AATACTTCGAAGTCACCCAATCAAAAGGATTCGTCATGGTTCTGCCCTCT GCCATGGGAAGCCTCGGCGAGGTATGTGGGTACGTAACACATCCCCAACG CTTTTCCTGGGCTGCCGCTTGGGTGCAGCAGGCACTGTTTATGAGGGAGC GCGAGACATACCGTAGCTCCCCATGTACGCTGGCGGCTGTAGATCTAGGA TAGAGATCTGTATGTGGCGTAACGAGTACGGATCAGCCATCACTTTGTTC TGGGCTTCATCCTCTGGCTGTCTCCTTTCTGCTACGATAGTGGCTCTGGC AAGGTTTGTCTACCGGTAGGGCGTGTTTCGTTGAGGAAGTTTTGTTCGAA AAAATGTCGCCGTTGATACCCTGTTTGTTTGTTTGTTTTTTCCTACTCCT ACAACTTGCTTTGGGCAGCTCTTACTGACGCACAAGCATCGAATACATGG GCGTCATGCCAAGATAGGCTATAACTAAATGGTTAGAAACACGCGTTCTC ATTCCGTCCCGACCCGTCCCGTCCGCCCCCGCCCCCGCCGTTTACAACCC GACCCTTCTCCAACTTGAAATCCAAACGACACACAATGAAAACCTATGAA AGATCGTATCGTCGGTGCAAGGTAGAGACGACGAGAGAAAAGCCGGTTCG ATCGGTCGAGCTCCATCGGTGATCACCAACGCCAAGATGTTCCGGCCAAA CGGGAAATTTTGCCGGCCGGAAGAGCCGCCAGCAGCGCTGGAGGACGCGC TGCCTGAGGTACCCCCCCCCCGGCCTTCCTCTCCCCCCGTTCTGCAAACG CCGTTGTCAACGAATGAGTCCACGAAAATGAATGAGCTGGGAGTTGGGGT GGGTGGGGGCCGGGGAAGGGCGTTCTCTCCGCTCGGGTGGTCTCTCGCTA GAGAAGAACACCTGAAGAGCGGGTGGAACTCCCTCCCATCTCCCCCTCTT AGTTCATTTGGAAATATATCTCAACAACGGGGCAGCTATTACAGCAGCAG TAACAGCCATCAAGAAAAACATGGTGGTGTTTGTTTTTGCAAAAGGTGTC CACGAGATGCCCTCGTCGGGGAGAAAATGACGCGTTCGCGAACATTCGCC GGGAGGTGTTGGGGGGGGTCACACCCCGGCCTTCTAGCGGTTGAACTAAT AACACGTTTCTCCAAGGGCTGTCAGTCGTTGTCGTGCGCGCTGACGAAAC GTGTGGATAGGTTGCCGGTGTAACCCAAGACTCAAATTTGCGTGGATACC CAGTACTGAATGAGAACGTACCGTCTTTGTTTGCGGCGGCCTGTCTTTCT TCTATGTGGGTCATGGCACCCCAGTCGGGTCCCGTGCTGGCGTTGGAAAT TGTCGCAGAGTCTCGGCACGGGGGGTTCGAAGGCCTGTTAGGCGTTGTCA ATGGCCTCCGACAGCGGTACGGGGGCGGGGTGTTCGCATCCAGCACGCCT GCGGAGGTGAGGGAAGTTCTTTGTCGTTTTCCTCGAAAACGTCGCCGAAT GTGATACAACCTGCTAGCCGGAATGTAACTCTTGGTGTTGGTGTTGTTTT ACCTGCTTGATGATGTTTGTTTTCGCGTTGGCACTAGTCTGTTTTTTATT TTATTTTGGTGGGGGGCTCATTTTTTCCGATTTTTTCTCTCATCTCATTG ATGAGCGGTGGACGAGTCAAGTCGACACAGGGAATACCGATGGAGGTAGC AGAGGCAGAGCACGGGCCGGTATTTTCTTTGTCTGGAAGACCACAACAAC AACAGCAACGACGGCACATACAGGGGAGATAAAATCTTTACATCTCCCGT CCTGTTTTTACGTTTCGTACACAATATAAGCATGTCACATACGTGCATGT GTCCTTCTTGCATTGTGTCTAATGGTGTGTCTTTCGGCCCAGGCGTCGGA GCACGCTCGCTACATTTTCCGGCAAGAACCCACCGGCCAAAATCAGCAAC CCAACGGCGGCAAGAACAACAGCAAGAACAACGAGCAAGAGTGCACCCTG TGCGTCGTGAAACCACATATTGTGCGAGGCGGAAGGTTGGGCGCGGTGCT TTCTTTCGTAGTGCAGAGGGGATTCGAGGTGAGCCAACGGCGTGAGGCTC TAGAGGGGGGGGTGAGTTAGGGTTAGGGGGGGGGGGGTTGGTGAGTTGAG GTTAGGTGAGGGTGAGGGGGGTGGTTGATGAGTTAGGGCTTGGTGGGTCG GATGGGTTGGGTGCGTGTGGTGGTGGCGTGGCGGTGGAGGGCGTCTCGGT TGTTTATTGTCGTACGGAATTTGTCTGTGAGCTATTCAGTCATTGGCAAA AACACAAAGAGCGCCCAACCAACTGTTGGTGGTGGCTCTATTAGGAGTAA AAAGGTCACTCCGTCTCGGTATGGATGCTGCGTGGTCAGTAGGGTGGAGT TACTGGTCTATCAAGTCAAGAAACACTTGAGTATGCCCCTTCCCCCCCTC CCCCTCCCCTCCCACACGCCTCCATATGACGCCTCGCATGAGTCGAGGTG GCGGACCTGCAAATGCTATACCTCGGGGAAGTCGGCACGGAGGAGCTGCT TCGACCTTACCGGGGGGTGGTGCCATACCACGCCGACGCGGTGCGGCACC TCAAATCCGGGCCTTGCGTGGCGCTGAGAATCCAGGCGAGAAAAGACATG AGCAGATAGGTATGGCACACATATAGACACGCATTCAGCCGTAGTTATCT CTGTAAATCTGTAATTCTAACTTTGGCCATCACAGAAGGTGCTCCAACGG TACTTTCTCTAATTTTGTTTGGGCGTGACCATCGTTTATTTCCTTATTTT AGTTTACTTTCTCCAAGCACGATATGTGCCTGGCTTGTGACCACGGGCTA GACTTTGTGGTGGTGAGCTCAATGTGATAATCAACATCAACAACACAACA ATCGATATCTACCCCATTATCCTTTGAGAACGCCCCCCGCTCCAAGGGAA TGCGCTCTCCCCCCCAAAACAAATACCGCCGAAGCACCACAAGATGATTA GAGTGCCTTGGGGTTATTGTTTACTTTTCCGCCCCCTTACATAGAAGTTC GCCTCCGGGCGCTCTTGATTGTCGAATAAGTTTTGGGCGCCCCCCGCGCG ATAATTTGCAGGCAATCAACGGCATTCACTCGGGCAGCACTGCCGTTGCT GTGGTCGTTGGTATATGTTCGTAGTTCTAGATTGTTGTTGTCGGTGGTGG TGTGGTATTGTTTTTGTTAGATTTTTTTCGCATTAAAACCACTTTCACCG TCAGCGTTAATCTGAGCATCTCCTTGGGACTGCTTTAGACCTCTACCGGT ATCCGGGTGCCCCAAATGGAAATAGAAGGAGACAACTGTTTGGGGTACAC GGTACTCGATTCGTATTATGTGGGATTCTGGGGATGCATGTGGTGTACGG GTATATGGCGGGGCCCCTGGCTGGGCTGCACCGCTGTGTGCTCACTCGTT ATAATAAAGGTCTTGAGTCAACCTTCTTTCCTCCTTCGGCCTCTGACGAA GCTTTTGGCACCAAACACGATTATCGGGCCTATGTCGCGGCGGAGTATTG GCGTTGGAGTTGTCGTGGAACCGTGGTCCGGGCGGTGGAACGATATTTTT GGGTTGAAGCTGGGACGGCACTTCGAGAGGTCGGGACAGCGGTGGATTTG TAGCTAGGACGGCACTTCGAGAGGTCGGGACAGCAAGTGTATTATTTTAT AATGACGACGACAAGGAGTAGTGAGATTGAGGCGTTGAGAGCGGAGCTGG AAAGTTCGCAGCAAGCAATAGAGACAGCGCAGCAAGCAGCTGCTGATTCA GAGGCAGAAGTCGCGTGTCTGCTGGCGGCGGGCGAGTCTGTCAACAGGCC GGCAGCTGGTGAGGCAGCTGGTCATCAGGGTGGCACTACCACAGCAGTGC GCCCAACACGGGAGTCGTGCGACCTTGGGGTGCGGACTTCACAAGTGAGT CGTCTTCGAGGAATTTTCGACTTGCTCCTCCCCCGAAATTCCCGACGACC TACTCTACATCAGCGTACATCAATTGGGCACGCCGCGTGAAGAATTCCCT GATCACCGCCGGCATTGGTCACGCCATCGAACCGAATGCGCCAGCTATTC CTGTGATCAGTCGGGGCGACGATGAGTACCTTGCCCACCAGTATGGGGCA GCGGTGGTCAGGGACCACCGCCGAGCTTGGTCAGGGACCACCGCCGAGCG TGGTCAATTCTGTCGGAGACAACGTATGATGAACCTTTTGAGGACAGTCT TTACAGCTGTGACTCTGTGATGGGTGTGTGGGTTTTCATGGAGGAATGGT GTCTCCCGAAGATCAAGGCGGAGAAATTTCTGCCGTCTCAGCAGTTCGAA ACCTTCGAATTCAAGGAGGGCGAGGACCCCCGGATTGGTTTTGCGGCTTT TTCTCAACTCGAAGCCACCATGCGTGCTTGCGGCTGCGAGAAGAGCGAAG AGGACACCGTTCACGTTCTCCTCCGGCAGCTCCCCGATAGTTACGACATG GAAAAACGAGGCCAGCTGGCCACTCCGAATCTCACTCGCTCTGTCCTGGA GTCAGTCGTGCGATCCTCGTATGCGACCCGCAAGGCGAATGAGCTCCAAG AGGCGACTGGCGGCTGCGGCAATGGCACTTCGAACCCGCATGCTCTCGCT GTAGGACGTGCTTTTGGGAGCGGGGGACACGGAGGATGCTGGAAAGGCAG CGGTGGCCAGAGGCAGTACGCCGGCGGAGGTGGCGGCGGGCGCTACACCG CTGGTGGGGGGGGACAACAGCAGCAGCAGCAGCAGCAGTGGCAGCAAGGT GGTGGACGGCAGCAGCCGCAGCAGCAGCAGCAGTGGCAGCAAGGTGGCGG ACGGCAGCAGCCGCAGCAGCAGCAGCAGCCCCCGCAGCGCCCGCAGCAGC AGTTCCAGCAGCAGCGGCAGCAGCAGCCTTCCAACCAGTCAGGTGGGAGA TTCGGTGTTGGGGGCATCTACGACAACGGAAGCAACTCCGTGTATTTCCA GCCGAAGTCTCCAATTCCTCTAAATATTCCGCAGGGAGTAGAGTACCGTT GTGGTCTGTGTGGCAGGTTTGGGCACAAGCCCGAAATTTGTGCGGCTCCG CGGCGGTTCGAGGGACATTGCGGGGCGTGCACCCAGTTTGGGCACATGCG AAAAATTGCTCCATCAGCGGTCTCTCGGCATCGCCGGCCGCACCGCCGCA TGTCCATGCTATCGCTCCCGCCGGCGCTGCTGGTAGCGCTGCAGCGCACG AGTGGGGAGGCGGCGGCGGCGGCGCCTTGTCCTCCCGGCAGATCGTTGTG GATCAGGGCGGCGACGACATACCTCTACAGCCGGGCGGGGAGGCGTACGG CGGTGGGGTGGATGGCGGCGGGGTTTTCCCGCGAGCTCCGGCGGACGGGC AGATGTCCTCCGCTGTTGTAGCTCAAAGCAGTGGCGACGGTGTTGGCGAC GGATGGAACACAGAATTGGCGCCGCAGCAGCAGCTACCCGGGCGTGAGCA GCAGCAGCATGGCGACGTTGAGCAGGTTGATTCTTCCGCAGACGGGGACT CCGGTGGAGTGATTCGGGGCGGAATGTTCGCGCTTCAGCTATACGCTACG TATGCGCCTCCCTCTCAAGTTTTCCAGCCGCGACCGGGGGGCCTCTTTTT TTCTGGGAGACACGGACGCGGCAATTCATGCCGTTTCTAATGATGAACAC GTCTACAATGGGCGTGGGCCGCGCCGCGGAGAGACGCTTCTCATGGTGGG TGACGGGGAGTGTCTTCCTGTATCGTGCTTTGGGGATTTGGACCTGGTGC TTCATTGCCGTTAGGACGTGCGGGTGACTCTGCGCAACGTAGCGGTTGTC CCGAAATTGGTGTTGGATGTCATCTCGTTCAGCGTCATCCAGAAGGCAAA GATACCAATACTGCTGGATGAGAGGGGGACTACGCTGCTCGACGGCAAGG TGACCTTTGTCATGCACGAGAACGGTAGTTTTGTCGAGGGTACTCGTGTT CCCCCCAGCACCCGTTCTCCGCCGGCGCCGATGGTTGCGGCCGTAATGCG GCCGGGCCGGCCCAAGAGCATGAATGTGAACGACATGCACTCCTCTCTTG GGCACGCGAGCCGCAAAACTTTGGTGGAGACGGCGACGCAGATGAGCATC AAGCTCACCGGCATCCAGCAGTATTGCGACGGGTGCGCCGAAAGCAAGGC GATCAGGTGCGGCGTCCCCAAGGTCGTCGGCCCTTCGCGTATGGCGGCAC GGCCGTTCCAGCGGGTGGGGGCGGACATGGGGGGTCCTTTTCTCGCGGTC AACCGGCGGCTCCGCCTACATCATTTCTATCGTGGACCACTACAGCGGCT ACGGGTGGGCGTTGTTCGCCCCCGACAAGAGTGCAAGCACCGTTTCGATC GCGTTCAAGGGGTGGCATGCGTCGATCAAGCCCCTCGCCGACAAGCACGG CGGGGTGGAGTCGCTCCTTACCGAAAACGGATCTGAATGGGTCAACGAGG ACTTCAAGCGGCCGCTGGTGGATCTGGGCATCGGGCGGGAGCTGACGGCG GTTGACAGCCCCAAGAGCAACGGCCGGGTCGAGCGACAGATCGCGCTGAT CATGGAGGGGGCTAAAGCGGCGTTTCTGGACTTCCCGAATACCTTCCTCG ACGTGGAGTTCCCCGAGCGCGCACTGCACTTCCGCAACATGTGGCCGGAG GCGTGCACGTGGATGAACGACTGCATCAACATCAGCGTGGAGTGCAGCAA GGCGGGCATGCGATGCCCGGAAGAGAAACTGTTCGGCAAGCGCAAGACAC AACTGGCGCTGCCGTTCATGGTGCCCGGTTTCCGTCACCGCAACCGTGCG ACGAAGATGGACAACAAGGGAGAGCGGTGTTTCTATCACAACTCCGGCAG CGACCACTCCTCCAGCACCGTCAAGATCATCTTGCCGTCTGGTGCGGCGA CGTATTCTTCGGACGTCACTTTCGGGTACCGGCGGCAGGGGTTCGGGGGG CAGGTGGCTACATGGGGTGGAAGGTGCTGTGGTCTCCACGGCGCCTCTGG CGCCTCTGGCGGCCATGCCGTCCGGTGACGGAGCGGCGGCAGCAGCGGTG GCGGCGGCCGGGGCACCTATGGGGGCTTCGCGTGGGGGGGGTCTTCCTCC CGCGGCGAGCGCGGTGCCATCGGCGGCGGCGGCGGCGGCGGCGGCAAAGA CGGTGGCGGCTTCGCGTGGAGGGGGTCTTCCTCCCGCGGCGAGCACGGTG CCACCGGTAGCAGCGGCAACAACGGCGGTGACGGCGGAGTGGGCAGATTT CATGGAGGACCACGGCGGCGGCGTGCGGATTGCGCGGGCGGCGGGGGGTG ATGCAACGGTGAGTGCCGGCGCGTTGTCTGCTACTCTACCTGCCCCTCCC CGCCCTGCGGCCACGCCGCCAACGCCGATTGAGGATTAGGGCGAGATGGT TCATGCCGGAGCGGGCAGCGATCGGGCGCACGGGCGCCAGGAGTACCGGG TGATTCCCAGGGTGACCAGGGCGGGCGCGAAGCGGAGCGGGATGACGCCG GGGGCTTTTGCACTGATGGCGTCGCAGGATGATGTCGAGCGGTCTCTCGC CACCGAGCCTCTGCCGGGCACCGTTTCGCCGGGGCTACCATCTGCGCCGG CCTGCGACCTCGACACACCGGCGACGTACGCTGAGGCGATGGCAGGGGAG CACAGGGAGACCTGGCAAAGTGCGATGGACGCGGAGTTTGGGGGGCTTTC GGCGTCGGAGACTTTTCAGGAAGCGGCCGGATCCTAGCAACGAGGGGAGA ACACCATCACGGCCAAATGGGTGTACAATTGGAAGGTAGACGAGTTTGGA AATGTTGTACGTGCCAAAGCTAGATTAGTGGTTCGCGGGTTTGCGCAGCG CGAGGGTGTTGATTTCTCTGAGACCTTTTCCCCTTGCCCCTCTGTTGCGA GCATCCGTCTATTGGCTGCTATCGCGTGCCATTTAGGGTGGGACGTCTGT CACTTTGATGCCGAACAAGCTTTCGTTCAATCCAAACTCGCTGAAGGTGT ATTCATTCGTTTGCCCCCTGGTTGTGGTACGCTTCATGGTAAAGTGGTGA AGTTGGGACGAAGTCTTTACGGCTTGCGGCAAGCGTCACGCACGTGGCAT CAACATCTGATGCGTGGGATACACCTTCTAGGTTTCGAATCGTGTGCTGC TGATGCCTGTGAGATGCGCTTGGTGGAGAACGGATCGGTCTCTATGGTGG TGTGCACGTAGACGACATATTTTCAATCGGACGCAAGAGCAGATGTGACC AGTTTGGTGTGGACCTCAACCGGTATTTCCCCATTTCCAACCTCGGGGAA CTGCGCTGGTACGCTGGCTGCCGTTTTTCGCGTGATTCGGTGTTGGAGAC GGTGACGATTTCGCAGCAGACTGTAGCAGAGCAGATCGTGGCGAAGTGTG GTGTGACAGAGAGCAGAGAAACGCTGATGTTGGTTGGTTTGAATCTTGAG CAGTTCGATGAAGACGAGCCGGATGTGGACGAGCCTTTTCGGTCGTTGGT GGGGCACTTGATGTGGCTGGCGAATCAGACTCGTCCGGATATTCTCAACG CGGTGCGGGCCGTGGCGAGGTATTCTCACCCGCCGAAGCTGGTGCATTGG CGGGCGGCGTTGCATGTCTTGATGTATGTTCGGGGAACCACTGATTTCGG CATCACTTTTCAGAGAGGCGTACCAGGAGGAGAGTACATGGAGCTTGTTG TAGATTCGGATTCCGCCAGCAAGGCAACCGACCGGCGGTCTGCTTCTGGT GCGGTGGTGATGTTTGCTGGTGCATGTTTGATGTATTTGTCTAGGACGCA AAAGAGCGTCATACTCTCGTCGACGGAGGCGGAGTACGTAGCCCTAGCTG AAGGGATGAAGGAGGCGATTTTCTCGCTATGTCTCTTGAATTTTATCTTT CCGGACCGCGATGTAGGGTGCACTTTGGTCCACGAGGACAACTTCGGGGC CGTTAACCTGGCAAGCAATCCGGCCACAACCCCCAGCTCAAAGCACATCG ACATCAAGCACCATTTCATTCGCGAACGCGTGGCACGGGGGGAGTTCAGG GTAGTTCACGTACGTTCTGCGTAGCAGCGTGCTGATTTCTTGATCAAAGC ACTGCCCAAAGACGCTTTTTGCTCGGACCGTGACTTTGTGACGAACATCC GGTGATTTGTGGGTGTTGCGTTGTTCGCCCTGAGTTTCTAGCCGTTCTTC GGCTATCGTCTCTGTTTTTGGCACCGCAGCATGTATGTTGTTTTTCTCTA TTTTAAATCACTGGGGGGGGGGAATATTGTGCCATGATTTTATGTTTTTT GCAGAGTTCACAAGTGGATTTGTTTTATTGTTCTGAAGGGATGCCAAAGG AGGGGGGCTGTTGCGCACTGGTTTATGTGTAAGATATTGAAGTTGCAGTC GCATCTATGAAGGTTTTTGCTTGACGCCTGTTGTCATCGTACACGTTGAG ATTTCATTTCATTGGTTCACTGGTTTTGCTTTTGTGATGCATTTGAAGGA AGGATCTGACATGTTTTGATCAAGCACGGTTGGAGCCTTCGTGCTTCCGA AGCTTGTTTGAATTGGTCAAAAAGTTGAATACTAGTTTTCACATTTCTGG TATTTCGTTGGCTTGAGAAACTGTGGGAAAGCGGATTCGCAATTCGTGGA TGGTATTTTCTCGAGAGGGTCTTAATTGTCTGTTGACGGACCTTTCGTAG GGGTTTTATTCAATTTTATCTGAAGATATGAGAGGAGTTCTGCAAATCGT ATCGAGCACCGAGAAGCGGGGCTGTTTGGGGTACACGGTACTCGATTCGT ATTATATCATGTGAGTTCTGGGGATGCATGTGGTGTACGGGTATATGGCG GGGGCCCTGGCTGGGCTGCACCGCTGTGTGCTCACTCGTTAATTATAAAG GTCTTGAGTCAACCTTCTTTCCTCCTTCGGCCTCTGACGAAGCTTTTGGC ACCAAACAACAACGACCTAGGGACTTTTAGCGATGTTTTTTCTCCTTTAA TTTCGGAAAGATCGCCCCTTTGCCTTTCTTTGCGAAAACGCCCCCCGGGA TGTGTTCTTTTTCACCAAAATATTTACCCCTGAGGCGTTGTCAAAGGATA CTACGGTACCACCATCGCGTGCGGCGGCGGCGGCTTGCCCTGTAAGCAGG AAAACATCGACCACTAAATCAATTCTCCACTGATGATGCAAGGCGACGAT GAGGCTTTTCCAATCTTAATAAGAGGGGATATAGGGTAATGCCCGATGAA GCATAGCATATCAAACTGTCCACATGTGATGCGTGCACCGCCTCTACACA CCACGCAGGGAGGGCACGACGTGGTGGAGGAATTCAGGGAGGCGTGCGGG CCGTCGGACCCGGAAGTGGCCAAGGCACTGTATCCGGACAGTCTTCGGGC CCTCCTTGGTGTGCAGCAGGTAAATGTGTGTGTGTTCGTGTGTGCATTTG TGTCTGTGTGCGCGTGCGTGCGCAATCTGTACGCTCTCGCACACAGCAGC TTATTAAGTGCTCCCTAAATGAAATGCAGCAAAGTGCAGTAGTATTGCCT TGATCACACTTTTGCATAAACAGCCTGGTATAGCGCTTACCGTATTCTAC ACAAGATACCACACCCCGTGTTAGGTTTTTTGCATTCCGTATTGCTCCAC AACCAGGAGGGTGCGAACACCAAACAGCCCGTCATACGAAAGCTCTCGAC GAGATCTTTCCAAAACCACCCTTTTCGGCAGTGGCACCGTCCTGGTTGTG GAGCTATACGGAATGCAAAAAGCTTAACACGGGGTGTGGTATCTTGTGTA GAATACGGTATTCTCGTCAAATTGTGGGGCTGTAATTTGTCGACAACAGC GGCAGTACCAACCGACCGAGTACATATCACATACACTGTTTCAAACCTGG CGATGAAGACATTGGACTTTTTTGTCAAATAAGAATCGCCCTACGGATTC ATCACCAACCACATGGCATACGCAAACGAACGACGACGACACCGAACAAC AAACCAGGCAACGAACGCTGTTCACTGCACCGACATGACCGAAGACGGCC TGCTGGAGTGCAACTACATGTTCGGCGTTGTCGCCAAGGACCGATACGGG GCATGA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig700:35134..48039+

>mRNA_P-littoralis_Contig700.7.1 ID=mRNA_P-littoralis_Contig700.7.1|Name=mRNA_P-littoralis_Contig700.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1134bp|location=Sequence derived from alignment at P-littoralis_Contig700:35134..48039+ (Pylaiella littoralis U1_48)
ATGGCCAAACCTGCCACTGCGCCGCCAGCGTTGTTCCCCATGCCGGTCGG
TTTCTCGGTGGAGTACTTCGACCCTGTGGCGAATTCGCTACGGACCTTCG
TGCTGACCGTCTTTCCCGACCAACGGGTTCAGATGGTTTGCAGCAACAAC
AAGACATTTCTTTCTAAGACTTACGCTAAAGATCTCCAAACGACCGACCT
CTACATTGGAGGCACCGTATCCCTCTTTTCTCGCGAGCTGAGCATCGTCG
ACTACGCGGACAAAAGCACCAGGAAATACTTCGAAGTCACCCAATCAAAA
GGATTCGTCATGGTTCTGCCCTCTGCCATGGGAAGCCTCGGCGAGGTATG
TGGAGACGACGAGAGAAAAGCCGGTTCGATCGGTCGAGCTCCATCGGTGA
TCACCAACGCCAAGATGTTCCGGCCAAACGGGAAATTTTGCCGGCCGGAA
GAGCCGCCAGCAGCGCTGGAGGACGCGCTGCCTGAGTCGGGTCCCGTGCT
GGCGTTGGAAATTGTCGCAGAGTCTCGGCACGGGGGGTTCGAAGGCCTGT
TAGGCGTTGTCAATGGCCTCCGACAGCGGTACGGGGGCGGGGTGTTCGCA
TCCAGCACGCCTGCGGAGGCGTCGGAGCACGCTCGCTACATTTTCCGGCA
AGAACCCACCGGCCAAAATCAGCAACCCAACGGCGGCAAGAACAACAGCA
AGAACAACGAGCAAGAGTGCACCCTGTGCGTCGTGAAACCACATATTGTG
CGAGGCGGAAGGTTGGGCGCGGTGCTTTCTTTCGTAGTGCAGAGGGGATT
CGAGGTGGCGGACCTGCAAATGCTATACCTCGGGGAAGTCGGCACGGAGG
AGCTGCTTCGACCTTACCGGGGGGTGGTGCCATACCACGCCGACGCGGTG
CGGCACCTCAAATCCGGGCCTTGCGGAGGGCACGACGTGGTGGAGGAATT
CAGGGAGGCGTGCGGGCCGTCGGACCCGGAAGTGGCCAAGGCACTGTATC
CGGACAGTCTTCGGGCCCTCCTTGGTGTGCAGCAGGCAACGAACGCTGTT
CACTGCACCGACATGACCGAAGACGGCCTGCTGGAGTGCAACTACATGTT
CGGCGTTGTCGCCAAGGACCGATACGGGGCATGA
back to top