prot_P-littoralis_Contig70.104.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig70.104.2
Unique Nameprot_P-littoralis_Contig70.104.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length778
Homology
BLAST of mRNA_P-littoralis_Contig70.104.2 vs. uniprot
Match: D8LKX6_ECTSI (Similar to ubiquitin specific protease 48 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKX6_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 5.200e-34
Identity = 80/135 (59.26%), Postives = 90/135 (66.67%), Query Frame = 0
Query:  265 ERGPSVSCLHPSLRGKG--AVTQERGNQPWCPICLDDNRAPGMFTMGSGSKRCPGCGFHAHAHCREEL-EVTP------------DGRWPCDECQRRPGGVVP--GDNPLWLRLKEARLSGGFKITS-TPL-PSS 380
            E GP  + LH SLRGKG  A +Q RGNQPWCP CL DNR PG  TMGS SKRCPGCG H HA CR +  E +P            DG W CDEC+RR  GVV   GD+P+WLRLK ARL GGFK++S +PL PSS
Sbjct:  525 EHGPDDTHLHESLRGKGGAAPSQPRGNQPWCPNCLGDNRLPGEKTMGSDSKRCPGCGLHTHARCRRKRPEASPGAAGATGGXXAADGSWACDECKRREDGVVVAGGDDPVWLRLKAARLDGGFKVSSLSPLQPSS 659          
BLAST of mRNA_P-littoralis_Contig70.104.2 vs. uniprot
Match: D7FUG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUG5_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 5.430e-31
Identity = 65/102 (63.73%), Postives = 73/102 (71.57%), Query Frame = 0
Query:  676 ISTVLNKTTTEACDALVEKLKDAVDKDDEGTWVHRTKLVDLCSSDEDLATYVIGRPTTQDMFKRVASKFKVLANLASRPGSRCQLESHDEDIEQGRYFALRE 777
            +ST LNKTT E CDA VEKL     KDDEG WVHRTKL+DLC +D DL  Y++G P  Q   +RVA KFKVLA+  S PGSRCQL SH ED+E  RYF LRE
Sbjct:    1 MSTKLNKTTKETCDASVEKLMAVAHKDDEGVWVHRTKLIDLCCTDGDLTNYLLG-PNAQCSPRRVAKKFKVLADFTSWPGSRCQLYSHTEDLEYSRYFILRE 101          
BLAST of mRNA_P-littoralis_Contig70.104.2 vs. uniprot
Match: D7FUG4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUG4_ECTSI)

HSP 1 Score: 129 bits (323), Expect = 2.390e-29
Identity = 71/109 (65.14%), Postives = 79/109 (72.48%), Query Frame = 0
Query:    1 MTTPWRVGAIGKGLLPWCIPLPDSSRVTDLTRAVEARQNKLCQEGKNEPKIAVGIRLRVGGELYAVDPDDLLLNLIPPGGQGGARFVATRAGS---GSASDTPDAAASA 106
            MTTPWRVGA G G+LPWCIPLP +S V DL RAVEARQNKL QE    PK A+GI+L+V GELYAVD DDLLLNLIP   +G A FVA RAG      ++D PD  A A
Sbjct:    1 MTTPWRVGARGDGVLPWCIPLPGASSVADLQRAVEARQNKLRQEDTESPKAAIGIQLKVDGELYAVDSDDLLLNLIPKDSKG-AMFVAYRAGGVPITPSADAPDVVAKA 108          
BLAST of mRNA_P-littoralis_Contig70.104.2 vs. uniprot
Match: D7FUF2_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF2_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 1.550e-25
Identity = 56/104 (53.85%), Postives = 63/104 (60.58%), Query Frame = 0
Query:  213 CAVCYGPLNIAHRPSFCCRTCHKLFHSACVGYDPRKRQCPPPDWVCPRCPNGERGPSVSCLHPSLRGKGAVTQERGNQPWCPICLDDNRAP-----GMFTMGSG 311
            C  C         PSF CR C KL+H +CVGY  R RQ PPPDW+CP CP GERGPS   +H S+ GKG V Q +GN PWCPICL D+R P     G    GSG
Sbjct:  122 CEACGKVFTRDVHPSFACRACRKLYHRSCVGYANRARQSPPPDWICPHCPGGERGPSPQ-VHLSVAGKGTVKQRKGNMPWCPICLRDDRLPNSKLVGRLNSGSG 224          
BLAST of mRNA_P-littoralis_Contig70.104.2 vs. uniprot
Match: A0A6H5L6A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6A7_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 2.920e-9
Identity = 37/84 (44.05%), Postives = 42/84 (50.00%), Query Frame = 0
Query:  308 MGSGSKRCPGCGFHAHAHCREELEVTPD---------------GRWPCDECQRRPGGVV--PGDNPLWLRLKEARLSGGFKITS 374
            MGS SKRCPGCG H                             G W CDEC+RR  GV     D+P+WLRLK ARL GGFK++S
Sbjct:    1 MGSDSKRCPGCGLHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSWACDECKRREDGVAVASADDPVWLRLKAARLDGGFKVSS 84          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig70.104.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LKX6_ECTSI5.200e-3459.26Similar to ubiquitin specific protease 48 n=1 Tax=... [more]
D7FUG5_ECTSI5.430e-3163.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FUG4_ECTSI2.390e-2965.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FUF2_ECTSI1.550e-2553.85PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5L6A7_9PHAE2.920e-944.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 422..472
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 519..533
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 383..491
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 172..186
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 604..627
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 517..627
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 438..465
NoneNo IPR availableCDDcd15489PHD_SFcoord: 213..261
e-value: 1.97205E-6
score: 43.4598
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 196..269
e-value: 3.0E-6
score: 28.8
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 213..261
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 210..264
score: 9.009399
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 207..267
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 288..349

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig70contigP-littoralis_Contig70:496279..515831 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig70.104.2mRNA_P-littoralis_Contig70.104.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig70 496112..516178 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig70.104.2 ID=prot_P-littoralis_Contig70.104.2|Name=mRNA_P-littoralis_Contig70.104.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=778bp
MTTPWRVGAIGKGLLPWCIPLPDSSRVTDLTRAVEARQNKLCQEGKNEPK
IAVGIRLRVGGELYAVDPDDLLLNLIPPGGQGGARFVATRAGSGSASDTP
DAAASAPWRKNKLTVPAAASSTKRRKVSAVQSRKESRPSKGTPSSKRTSS
GSGNRSGSSSSKIRPGRGRNRTKSCTSKSSGGSGSSGIGGIGGIGGSSSR
TAKSCLIGDTKPCAVCYGPLNIAHRPSFCCRTCHKLFHSACVGYDPRKRQ
CPPPDWVCPRCPNGERGPSVSCLHPSLRGKGAVTQERGNQPWCPICLDDN
RAPGMFTMGSGSKRCPGCGFHAHAHCREELEVTPDGRWPCDECQRRPGGV
VPGDNPLWLRLKEARLSGGFKITSTPLPSSGACITPATAGDDDSLDFLGW
TSASPDSTEPPPASPVGPPSIRDEKEDTAAVAAAAVAAAEEEEEEEAAVA
AAEEEEEEEEEAEEAAAATTTTTTAPAAPAEVTATEITAAGAASFLPAQC
LHRFSPSLAPSAAIMATPTTAVPPPPPPSSAFPSPSAAASAATVAAAAAA
TAAAAAARLPSRGAEEGISAKESSLPAALPPPSPASATATTIAPTIMTGP
ESRGGDDSVKDAADMDNTPRRYPKRTKMATTPDASQARGRAEFRHELDWQ
TAENTVLASIMLHGTPEEQNSARVLISTVLNKTTTEACDALVEKLKDAVD
KDDEGTWVHRTKLVDLCSSDEDLATYVIGRPTTQDMFKRVASKFKVLANL
ASRPGSRCQLESHDEDIEQGRYFALRE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR019786Zinc_finger_PHD-type_CS
IPR019787Znf_PHD-finger
IPR011011Znf_FYVE_PHD