mRNA_P-littoralis_Contig70.102.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig70.102.3 vs. uniprot
Match: A0A6H5K0Z5_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0Z5_9PHAE) HSP 1 Score: 826 bits (2134), Expect = 1.110e-282 Identity = 462/681 (67.84%), Postives = 509/681 (74.74%), Query Frame = 3
Query: 483 MDRSRMSTDAFERVSRLASSPDDPASIAVSLGATELDITLVDNEVRKVLAALHGSRENTYAGRTNDTPEGGEFLKKQLERLMKEKAQFKEKKLALLQLQAALNPRQKAVVAAYSEPSARGGRTAAAXXXXXXXXXXXXXXXKAQGSGPAGDRSQAVAAAVWRFVVSAFFVRLWRGLVERWLHTSPAALLDDADPAAILKYGSPRAGFLSTLKNMIISPASTFPAP-----TLEQDLKAVAETTMIWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGPDGHTVEKRARFSFTFRRDKPGSPHPWTIVEHHSSSMPTAPKGLKHVGPAGKPKKVVKEITPDQKAVADTTAVWKETVTLGTDDAPRKTADLYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLTEYTPAPVRVYGQFAVQAGTYTFAWEGDDGDTVHKRARFSFTFRRDKPGGPQQWTIVEHHSSSMPDAPAELKRVEQEEE-IDYVAQAVAEMASTAPPSVTSTVSSTLPPSPPKQRAAXATASAAPSPDMVNTHEVKAMVQVGESGLGLVLGKEKEGSRWVVNGFRPMPNGAANPAEEAGIEPGDTLQQVDGVQLGSYKEGVEIFKKLRGPVVLTVLRQNDEVMI 2507
MDRSRMST+AFERVSR+AS D SIAVSLGAT+LDI LVDNEVR+ LAA+HG+++ TYAGRTN+T G +LKKQLERLMKEKAQFKEKKLAL QLQ L R A Y+E R +A PA + GFLS+LKNMIISPA P+P T E+D +AVA+TT++WKETVTSGTYDAPKKTAALYAED VLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGPDG TVEKRARFSFTFRR +PGSP PWTIVEHHSSSMPTAP GLK VG PKK+VKEITPDQKAVA+TT VWK+TVTLGTDDAP+KTA LYA DAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRL EYTPAPVRVYG+FAVQAGTYTFAWEGDDGDTV KRARFSFTFRR KPG P+ WTIVEHHSSSMPDAPAELK VE E++ IDYVAQAVA++++T+ S SSTLPPSPP ++ A AA + D VN H V VG GLGLVLGKE++G+RWVVNGFR MP+G NPAE AGIE GDTLQ+V GV LG+YKEG+E+FKKLRGPVVLTV RQNDE++I
Sbjct: 1 MDRSRMSTNAFERVSRVASGAKDAESIAVSLGATDLDIELVDNEVRRALAAIHGTKKETYAGRTNETAAGVSYLKKQLERLMKEKAQFKEKKLALQQLQQELPKR----AAKYAE------------------------------------RREA-----------------------------PAXXXXXXXXXXXXXXPAATGGFLSSLKNMIISPAPAEPSPAATVPTPEEDRQAVADTTLVWKETVTSGTYDAPKKTAALYAEDAVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGPDGVTVEKRARFSFTFRRGRPGSPRPWTIVEHHSSSMPTAPAGLKRVGQDAMPKKIVKEITPDQKAVAETTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGEFAVQAGTYTFAWEGDDGDTVEKRARFSFTFRRGKPGSPRPWTIVEHHSSSMPDAPAELKHVEPEDDGIDYVAQAVADLSATS-----SVSSSTLPPSPPPRKGQ---AMAAFTED-VNHHSVDVTANVGSCGLGLVLGKEEQGTRWVVNGFRSMPDGKPNPAEAAGIEVGDTLQRVGGVPLGTYKEGIELFKKLRGPVVLTVCRQNDEILI 603
BLAST of mRNA_P-littoralis_Contig70.102.3 vs. uniprot
Match: D7FUF8_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF8_ECTSI) HSP 1 Score: 698 bits (1801), Expect = 3.090e-233 Identity = 408/690 (59.13%), Postives = 457/690 (66.23%), Query Frame = 3
Query: 483 MDRSRMSTDAFERVSRLASSPDDPASIAVSLGATELDITLVDNEVRKVLAALHGSRENTYAGRTNDTPEGGEFLKKQLERLMKEKAQFKEKKLALLQLQAALNPRQKAVVAAYSEPSARGGRTAAAXXXXXXXXXXXXXXXKAQGSGPAGDRSQAVAAAVWRFVVSAFFVRLWRGLVERWLHTSPAALLDDADPAAILKYGSPRAGFLSTLKNMIISPASTFPAPTLEQDLKAVAETTMIWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGPDGHTVEKRARFSFTFRRDKPGSPHPWTIVEHHSSSMPTAPKGLKHVGPAGK-----PKKVVKEITPDQKAVADTTAVWKETVTLGTDDAPRKTADLYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLTEYTPAPVRVYGQFAVQAGTYTFAWEGDDGDTVHKRARFSFTFRRDKPGGPQQWTIVEHHSSSMPDAPAELKRVEQEEEIDYVAQAVAEMASTAPPSVTSTVSSTLPPSPPKQRAAXATA-------SAAPSPDMV---NTHEVKAMVQVGESGLGLVLGKEKEGSRWVVNGFRPMPNGAANPAEEAGIEPGDTLQQVDGVQLGSYKEGVEIFKKLRGPVVLTVLRQNDEVMI 2507
M+R RM T +RVSRLAS+ D ASI+VSLG + DI LVD +VRK+LAA+ G+ + TYAG +N+T +G FL+KQL+ LMKEKAQ+KEK+LALLQLQ L G+ E +++PA S A T +D KAVA+TT++WKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFA+QAGTYTFAFQG DG TVEKRARFSFTFRRD+PGSP PWTIVEHHSSSMPTAP GLK VGP PKKV EITPDQKAVA TT VWK+TVTLGTDDAP+KTA LYA DAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRL EYTPAPVRVYGQFAV+AGTYTFAW+GDDG TV KRARFSFTFRRDKPG PQ WTIVEHHSSSMP APAELK VE E ++D + QAV+E++ P X SA PS +TH V V +G+ GLGLVLGKE+ GSRW V GFR MP+G NPA GIE GDTLQ++DGV LGSYK+G+E+FKK G VV+TVLRQ DE+ I
Sbjct: 1 MERGRMDTTTLDRVSRLASNVGDAASISVSLGQIDWDIKLVDQDVRKLLAAVQGTSKQTYAGTSNETEQGRAFLQKQLDGLMKEKAQYKEKRLALLQLQDELP-----------------------------------------------------------------------GIPEDGEYSAPAG-------------------------------KSPGVATTEAEDQKAVADTTLVWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGSPQPWTIVEHHSSSMPTAPAGLKRVGPNADLVKVTPKKV--EITPDQKAVAATTIVWKDTVTLGTDDAPKKTAALYAADAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKPVEPEVDMDTIVQAVSEVSVADKPXXXXXXXXXXXXXXXXXXXXXXXXXXEASGDSAKPSEGQTFKPDTHAVDVTVSLGQHGLGLVLGKEEAGSRWAVKGFRDMPDGQPNPASAGGIEVGDTLQKLDGVTLGSYKDGMEMFKKQSGSVVITVLRQ-DEITI 585
BLAST of mRNA_P-littoralis_Contig70.102.3 vs. uniprot
Match: D7FN21_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN21_ECTSI) HSP 1 Score: 645 bits (1665), Expect = 7.410e-213 Identity = 388/698 (55.59%), Postives = 444/698 (63.61%), Query Frame = 3
Query: 483 MDRSRMSTDAFERVSRLASSPDDPASIAVSLGATELDITLVDNEVRKVLAALHGSR-ENTYAGRTNDTPEGGEFLKKQLERLMKEKAQFKEKKLALLQLQAALNPRQKAVVAAYSEPSARGGRTAAAXXXXXXXXXXXXXXXKAQGSGPAGDRSQAVAAAVWRFVVSAFFVRLWRGLVERWLHTSPAALLDDADPAAILKYGSPRAGFLSTLKNMIISPASTFPAPTLEQDLKAVAETTMIWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGPDGHTVEKRARFSFTFRRDKPGSPHPWTIVEHHSSSMPTAPKGLKHVGPAGKPKKVVK---EITPDQKAVADTTAVWKETVTLGTDDAPRKTADLYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLTEYTPAPVRVYGQFAVQAGTYTFAWEGDDGDTVHKRARFSFTFRRDKPGGPQQWTIVEHHSSSMPDAPAELKRVEQE-----EEIDYVAQAVAEMASTAPPSVTSTVSSTLPPS----------PPKQRAAXATASAAPSPD----MVNTHEVKAMVQVGESGLGLVLGKEKEGSRWVVNGFRPMPNGAANPAEEAGIEPGDTLQQVDGVQLGSYKEGVEIFKKLRGPVVLTVLRQNDEVMI 2507
M+R+RM T +RVSRLAS+ D SI VSLGA E DI LVD +VRK+L+ L G TYAG +N+T +G FLKKQL+ LM EKAQ+KEK+LALLQLQ L P + + AA P A A PAA PT E+D AVA TT++WK+TVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELR+VEYTPVAVRVYGDFAVQAGTYTFAFQG DG TVEKRARFSFTFRRD P SP PWTIVEHHSSSMP AP GLK VGP + KV E+TP+ KA ++TT VWK+TVTLGT+DAP+KT+ LY EDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRL EY+PAP RVYGQFAVQAGTYTFAW+G+D +TV KRARFSFTFRRD P P WTIVEHHSSSMP APA LKRVE + +E+ V A A +A+ P + P P A + PD + TH V + VG +GLG++LG+EKEG+RW V GFR MP+G PAE AG+E GDTLQ+++GV LGSYKEG+ +FKK G LT+LRQ DE+ I
Sbjct: 1 MERTRMDTSTLDRVSRLASNVGDATSIQVSLGALEWDIKLVDGDVRKLLSCLQGKPGAQTYAGTSNETEQGRAFLKKQLDGLMAEKAQYKEKRLALLQLQQEL---------------------------------------------PNLEEDEEYAAGA----------------------PEPEA---PAPPAA----------------------------PTEEEDKAAVAATTVVWKDTVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRLVEYTPVAVRVYGDFAVQAGTYTFAFQGADGATVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPNAPAGLKRVGPNAELVKVTPKELEVTPEMKAGSETTIVWKDTVTLGTEDAPKKTSALYPEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYSPAPARVYGQFAVQAGTYTFAWQGNDDETVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPSAPAGLKRVENDPAAVMDEV-VVEDAPAVVAAEEPXXXXXXXXAEAEPDVVXXXXXAAEEPASEEAEEVPDFSVVPDEEPFVPPTHPVDVTITVGSNGLGVILGEEKEGTRWTVKGFRNMPDGDKGPAEVAGVEVGDTLQKLEGVILGSYKEGMAMFKKQTGSFSLTILRQ-DEITI 598
BLAST of mRNA_P-littoralis_Contig70.102.3 vs. uniprot
Match: A0A6H5LB09_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB09_9PHAE) HSP 1 Score: 651 bits (1680), Expect = 2.100e-201 Identity = 394/702 (56.13%), Postives = 434/702 (61.82%), Query Frame = 3
Query: 483 MDRSRMSTDAFERVSRLASSPDDPASIAVSLGATELDITLVDNEVRKVLAALHGSR-ENTYAGRTNDTPEGGEFLKKQLERLMKEKAQFKEKKLALLQLQAALNPRQKAVVAAYSEPSARGGRTAAAXXXXXXXXXXXXXXXKAQGSGPAGDRSQAVAAAVWRFVVSAFFVRLWRGLVERWLHTSPAALLDDADPAAILKYGSPRAGFLSTLKNMIISPASTFPAPTLEQDLKAVAETTMIWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGPDGHTVEKRARFSFTFRRDKPGSPHPWTIVEHHSSSMPTAPKGLKHVGPAGK-----PKKVVKEITPDQKAVADTTAVWKETVTLGTDDAPRKTADLYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLTEYTPAPVRVYGQFAVQAGTYTFAWEGDDGDTVHKRARFSFTFRRDKPGGPQQWTIVEHHSSSMPDAPAELKRVEQE-------------------EEIDYVAQAVAEMASTAPPSVTSTVSSTLPPSPPKQRAAXATASAAPS--PDMVNTHEVKAMVQVGESGLGLVLGKEKEGSRWVVNGFRPMPNGAANPAEEAGIEPGDTLQQVDGVQLGSYKEGVEIFKKLRGPVVLTVLRQNDEVMI 2507
M+R+RM T +RVSRLAS+ D SI VSLGA E DI LVD +VRK+L+ L G TYAG +N+T +G FLKKQL+ LM EKAQ+KEK+LALLQLQ L L +D + AA D AVA TT+IWK+TVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQG DG TVEKRARFSFTFRRD PGSP PWTIVEHHSSSMP AP GLK VGP + PKK+ EITPD KAV++TT VWK TVTLGT+DAP+KTA LYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRL EYTPAP RVYGQFAVQAGTYTFAW+G+DG+TV KRARFSFTFRRD P P WTIVEHHSSSMP AP LKRVE + EE + A E A+ A P V S P P + TH V V VG GLGLVLG+EKEG+RW V GFR MP+G PAE AG+E GDTLQ+++GV LGSYKEG+ +FKK G LTVLRQ DE+ I
Sbjct: 1144 MERTRMDTSTLDRVSRLASNVGDATSIQVSLGALEWDIKLVDGDVRKLLSCLQGKPGAQTYAGTSNETEQGRAFLKKQLDGLMAEKAQYKEKRLALLQLQQEL-----------------------------------------------------------------------------------PKLQEDEEYAA---------------------------------DKAAVAATTIIWKDTVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGADGETVEKRARFSFTFRRDHPGSPTPWTIVEHHSSSMPNAPAGLKRVGPNAELVKVTPKKL--EITPDMKAVSETTIVWKNTVTLGTEDAPKKTAALYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPARVYGQFAVQAGTYTFAWQGNDGETVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPSAPDGLKRVENDPAAVMDDVVVEEAPAVVAAEEPEEPAVVADEPAAEAEPDVVXXXXXXXXXXXXXXXXEVPDFSVVPDEEPFVPTTHPVDVTVTVGSHGLGLVLGEEKEGTRWTVKGFRNMPDGDKGPAEVAGVEVGDTLQKLEGVVLGSYKEGMAMFKKQTGSFSLTVLRQ-DEITI 1726
BLAST of mRNA_P-littoralis_Contig70.102.3 vs. uniprot
Match: A0A6H5JT29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT29_9PHAE) HSP 1 Score: 565 bits (1457), Expect = 2.290e-184 Identity = 324/552 (58.70%), Postives = 353/552 (63.95%), Query Frame = 3
Query: 483 MDRSRMSTDAFERVSRLASSPDDPASIAVSLGATELDITLVDNEVRKVLAALHGSRENTYAGRTNDTPEGGEFLKKQLERLMKEKAQFKEKKLALLQLQAALNPRQKAVVAAYSEPSARGGRTAAAXXXXXXXXXXXXXXXKAQGSGPAGDRSQAVAAAVWRFVVSAFFVRLWRGLVERWLHTSPAALLDDADPAAILKYGSPRAGFLSTLKNMIISPASTFPAPTLEQDLKAVAETTMIWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGPDGHTVEKRARFSFTFRRDKPGSPHPWTIVEHHSSSMPTAPKGLKHVGPAGK--------------------------PKKVVKEITPDQKAVADTTAVWKETVTLGTDDAPRKTADLYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLTEYTPAPVRVYGQFAVQAGTYTFAWEGDDGDTVHKRARFSFTFRRDKPGGPQQWTIVEHHSSSMPDAPAELKRV 2060
M+R RM T +RVSRLAS+ D ASI+VSLG + DI LVD +VRK+LAA+ G+ + TYAG +N+T +G FL+KQL+ LMKEKAQ+KEK+LALLQLQ D P P D KAVA+TT++WKETVTSGTYDAPKKTAALYAED VLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFA+QAGTYTFAFQG DG TVEKRARFSFTFRRD+PGSP PWTIVEHHSSSMPTAP GLK VG PKKV EITPDQKAVA TT VWK+TVTLGTDDAP+KTA LYA DAVLWGTVSEEVRETPEQIYDYFDFFARLPKLR+ EYTPAPVRVYG+FAV+AGTYTFAW+G+DG TV KRARFSFTFRR KPG PQ WTIVEHHSSSMP APAELK V
Sbjct: 1 MERGRMDTTTLDRVSRLASNVGDAASISVSLGQIDWDIKLVDQDVRKLLAAVQGTSKQTYAGTSNETEQGRAFLQKQLDGLMKEKAQYKEKRLALLQLQ-------------------------------------------------------------------------------------------DELPG--------------------------IPEDAAYSDQKAVADTTLVWKETVTSGTYDAPKKTAALYAEDAVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGSPQPWTIVEHHSSSMPTAPAGLKRVGKLYSVRVFLPVVVGCEFFKVGPNADLVKVTPKKV--EITPDQKAVAATTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRVVEYTPAPVRVYGEFAVEAGTYTFAWQGEDGKTVEKRARFSFTFRRGKPGSPQPWTIVEHHSSSMPIAPAELKPV 433
BLAST of mRNA_P-littoralis_Contig70.102.3 vs. uniprot
Match: D7FUF9_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF9_ECTSI) HSP 1 Score: 518 bits (1333), Expect = 2.380e-163 Identity = 302/518 (58.30%), Postives = 344/518 (66.41%), Query Frame = 3
Query: 528 RLASSPDDPASIAVSLGATELDITLVDNEVRKVLAALH--GSRENTYAGRTNDTPEGGEFLKKQLERLMKEKAQFKEKKLALLQ----LQAALNPRQKAVVAAYSEPSARGGRTAAAXXXXXXXXXXXXXXXKAQGSGPAGDRSQAVAAAVWRFVVSAFFVRLWRGLVERWLHTSPAALLDDADPAAILKYGSPRAGFLSTLKNMIISPASTFPAPTLEQDLKAVAETTMIWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGPDGHTVEKRARFSFTFRRDKPGSPHPWTIVEHHSSSMPTAPKGLKHVGPA-GKPK--KVVKEITPDQKAVADTTAVWKETVTLGTDDAPRKTADLYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLTEYTPAPVRVYGQFAVQAGTYTFAWEGDDGDTVHKRARFSFTFRRDKPGGPQQWTIVEHHSSSMPDAPAELK 2054
R +S D+ AS AVSL A + D+ LVD +VR++L L G+ TYAGR+N TP+G FL+ Q++ LM+EKAQ+KEK++ L+Q + + S+ + +GS P G R SPA GS RA SPA + T +D +AVAETT++WK+TVTSGTYDAPKKTAALYA DG LWGTVSEEVRDTP+QIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTF++Q DG VEKRARFSFTFRRD PG+ PWTIVEHHSSSMPTAP GLK VG G P+ KVVKE TPDQKAVA T VWK+TVT+GTDD PRKTADLYA+DA LWGTVSEEVR+TPEQIY YFD+FARLP LRL EYTP VRVYG FAVQAGTYTF+W+ +DGDTV KRARFSFTFRRD P PQQW IVEHHSSSMP APA LK
Sbjct: 8 RQSSVSDEAASTAVSLAAIDWDVALVDKDVRRLLEVLQDDGAEGKTYAGRSNSTPQGKAFLQNQVDGLMREKAQYKEKRMVLMQRXXXXXXXXXXXXXXXXXSVANSSSELPKATPPSLPQTPTNDNSTHSTSRRGSFPLGPRP------------------------------SPAP-------------GSLRAP----------SPAKS---ATEAEDRRAVAETTVLWKDTVTSGTYDAPKKTAALYAPDGTLWGTVSEEVRDTPQQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFSWQADDGAIVEKRARFSFTFRRDNPGTERPWTIVEHHSSSMPTAPAGLKAVGVGPGIPRGPKVVKETTPDQKAVAATAVVWKDTVTMGTDDTPRKTADLYAQDATLWGTVSEEVRDTPEQIYAYFDYFARLPALRLVEYTPVAVRVYGDFAVQAGTYTFSWQDNDGDTVEKRARFSFTFRRD-PNKPQQWAIVEHHSSSMPTAPAGLK 468
BLAST of mRNA_P-littoralis_Contig70.102.3 vs. uniprot
Match: A0A6H5JX02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX02_9PHAE) HSP 1 Score: 479 bits (1232), Expect = 7.860e-151 Identity = 245/311 (78.78%), Postives = 265/311 (85.21%), Query Frame = 3
Query: 1131 SPASTFPAPTLEQDLKAVAETTMIWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGPDGHTVEKRARFSFTFRRDKPGSPHPWTIVEHHSSSMPTAPKGLKHVGPA-GKPK--KVVKEITPDQKAVADTTAVWKETVTLGTDDAPRKTADLYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLTEYTPAPVRVYGQFAVQAGTYTFAWEGDDGDTVHKRARFSFTFRRDKPGGPQQWTIVEHHSSSMPDAPAELK 2054
+P T +P L D +AVAETT++WK+TVTSGTYDAPKKTAALYA DG LWGTVSEEVRDTP+QIYAYFDYFARLPEL+VVEYTPVAVRVYGDFAVQAGTYTF++Q DG VEKRARFSFTFRRD PG+ PWTIVEHHSSSMPTAP GLK VG G P+ KVVKE TPDQKAVA T VWK+TVT+GTDD PRKTADLYA+DA LWGTVSEEVR+TPEQIY YFD+FARLP LRL EYTP VRVYG FAVQAGTYTF+W+ +DG TV KRARFSFTFRRD P PQQW IVEHHSSSMP APA LK
Sbjct: 16 TPDRTALSPKL--DRRAVAETTVLWKDTVTSGTYDAPKKTAALYAPDGTLWGTVSEEVRDTPQQIYAYFDYFARLPELKVVEYTPVAVRVYGDFAVQAGTYTFSWQADDGTIVEKRARFSFTFRRDNPGTDRPWTIVEHHSSSMPTAPAGLKAVGVGPGIPRGPKVVKETTPDQKAVAATAVVWKDTVTMGTDDTPRKTADLYAQDATLWGTVSEEVRDTPEQIYAYFDYFARLPALRLVEYTPVAVRVYGDFAVQAGTYTFSWQDNDGTTVEKRARFSFTFRRD-PSKPQQWAIVEHHSSSMPTAPAGLK 323
BLAST of mRNA_P-littoralis_Contig70.102.3 vs. uniprot
Match: D7FY20_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY20_ECTSI) HSP 1 Score: 366 bits (939), Expect = 3.100e-105 Identity = 205/392 (52.30%), Postives = 259/392 (66.07%), Query Frame = 3
Query: 1062 PAAILKYGSPRAGFLS---------TLKNMIISPASTFPAPTL----EQDLKAVAETTMIWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGPDGHTVEKRARFSFTFRRDKP-GSPHPWTIVEHHSSSMPTAP----------------KGLKHVGPAGKPKKVVKEITPDQKAVADTTAVWKETVTLGTDDAPRKTADLYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLTEYTPAPVRVYGQFAVQAGTYTFAWEGDDGDTVHKRARFSFTFRRD-KPGGPQQWTIVEHHSSSMPDAPAELKRVEQEEEIDYVAQAVAEMAS---TAPPSVT 2135
P + K SPR L ++++ PA P P E+D KAV+ + W VTSG DAP++TAALYAEDG LW TVSEEV +TP+QI AYF+ FARLP+LR+VEYTPVA RVYG+FAV AGTYTFA++G DG VEKRARFSFTFRRD+ G+P PW IVEHHSSSMPTAP + + P K K+ + DQ+AVA T +W V LGTD+APRKTA LYA+DA LWG+VS+ +R+TP+ IY YFD F+RLP+LRL ++ P VRVYG FAVQAGTYTF+W G+ G +V ++ARF+FTFRRD PG P W+IVEHH+ P L RV ++ +++++A++ S TAPPS T
Sbjct: 305 PPTVSKTASPRRATLPLSASSPSPVASRSVVRPPALRTPTPPRISAEERDKKAVSAAAIAWTNAVTSGARDAPRRTAALYAEDGSLWETVSEEVCNTPQQITAYFERFARLPQLRMVEYTPVAARVYGEFAVLAGTYTFAWRGEDGGPVEKRARFSFTFRRDRTRGAPRPWLIVEHHSSSMPTAPXXXXXXXXXXXXXXXXEPVDPTPPRTKAAKIGNDPNADQRAVAAATVMWTRAVALGTDEAPRKTAALYAKDATLWGSVSDAIRDTPDLIYKYFDKFSRLPELRLVDFAPVTVRVYGDFAVQAGTYTFSWRGEGGASVERQARFTFTFRRDGNPGNPYGWSIVEHHA-----VPVGLSRVSSGVDLADLSKSLADVRSATATAPPSTT 691
BLAST of mRNA_P-littoralis_Contig70.102.3 vs. uniprot
Match: A0A6H5JTS4_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTS4_9PHAE) HSP 1 Score: 316 bits (810), Expect = 2.050e-89 Identity = 261/717 (36.40%), Postives = 328/717 (45.75%), Query Frame = 3
Query: 549 DPASIAVSLGATELDITLVDNEVRKVLAALHGSREN-TYAGRTNDTPEGGEFLKKQLERLMKEKAQFKEKKLALLQLQAALNPRQKAVVAAYSEPSARGGRTAAAXXXXXXXXXXXXXXXKAQGSGPAGDRSQAVAAAVWRFVVSAFFVRLWR-GLVERWLHTSPAALLDDADPAAILKYGSPRAGFLSTLKNMIISPASTFPAPTLEQDLKAVAETTMIWKETVTSGTYDAPKKTAALYAEDGVLWGT------------VSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGPDGHTVEKRARFSFTFRRDKPGSPHPWTIVEHHSSSMPTAPKGLK--HVG-----------------------------------------------------PAGKPKKVVKEITPDQKAVADTTAVWKETVTLGTDDAPRKTADLYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLTEYTPAPVRVYGQFAVQAGTYTFAWEGDDGDTVHKRARFSFTFRRDKPGGPQQWTIVEHHSSSMPDAPAELKRVEQEEEIDYVAQAVAEMASTAPPSVTSTVSSTLPPSPPKQRAAXATASAAPSPDMVNTHEVKAMVQVGESGLGLVLGKEKEGSRWVVNGFRPMPNGAANPAEEAGIEPGDTLQQVDGVQLGSYKEGVEIFKKLRGPVVLTVLRQN 2492
D AS+AVS+ A +LDI LVD +VR++LA L E +YAG ++ TPEG FL+++L+ LM KA++KEKKLA LQLQ L VVA E + G K++GS AG + + + + R L+E A D AD + + G + + I SP+ +F E++ ++V+ETT+ W ETVT GTYDAPK+TA LYA D +LWGT VSE VRDTPEQIYAYFDYFARLPEL+VVEYTP VRVYGDFA QAG+YTF++QG DG TVE RARFSFTFRR P SP PWTIVEHHSSSMPT+P L+ VG A + +W T A + A + + E+ D R E A + A + K G SS + PA E EE+ + AV+ A S T + D H++ A V G GLGL+LG+EKEG+RWVV GFR MP+G NPAE AGIE GDTLQ++ GV LGSYK+G+EIFKK RGPVVLT+ RQN
Sbjct: 20 DSASVAVSVAAIDLDIALVDKDVREILACLQEGGEGLSYAGNSSATPEGRAFLERELDGLMVVKARYKEKKLARLQLQRGLP-----VVAVDWEIARVDGEV---------REVLGALQGKSEGSPYAGKSKDVLEKTLDDLMREKTEYKEKRLALLELQDDQLKAPGSDAADKP---QQPQEKTGSGAVAEVAIASPSGSFA----EEETRSVSETTLAWTETVTRGTYDAPKRTAELYAPDAILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAGSYTFSWQGTDGSTVEMRARFSFTFRRAGPSSPQPWTIVEHHSSSMPTSPLELELNRVGLNTNLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKASRSPIWSGLFRAFTSSAASAASSDQPAAASVASAPEAKTMTAEEEAED----------ARAAEQARAEIXXXXXXXXXARERSXXXXXXXXXXXXXXXXXXXXXAETKGGRAS--------SSGLQTPPA--PESEHHEEVRASSSAVSSSAVARELSFDGTGA---------------------GKDKAKIHDITATV--GPLGLGLMLGEEKEGTRWVVKGFRVMPDGKPNPAEAAGIEVGDTLQKLGGVPLGSYKDGIEIFKKQRGPVVLTISRQN 672
BLAST of mRNA_P-littoralis_Contig70.102.3 vs. uniprot
Match: A0A6H5JSB2_9PHAE (DUF4440 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JSB2_9PHAE) HSP 1 Score: 211 bits (536), Expect = 4.880e-58 Identity = 107/147 (72.79%), Postives = 118/147 (80.27%), Query Frame = 3
Query: 1152 APTLEQDLKAVAETTMIWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGPDGHTVEKRARFSFTFRRDKPGSPHPWTIVEHHSSSMPTAPKGLKHV 1592
A E D K V +TT+ WKE VT GT DAP+KTA LYA DGVLWGTVSEEVRDTPE+IY YFDYFARLP LR+ E+TPV++RVYGDFA +AGTYTF +QG DG EKRARFSFTFR D P SP WTIVEHHSSSMPT+P LKHV
Sbjct: 97 AAVTEGDRKGVEQTTIRWKEMVTLGTPDAPRKTADLYAVDGVLWGTVSEEVRDTPEEIYDYFDYFARLPNLRLSEFTPVSLRVYGDFATEAGTYTFKWQGEDGVPKEKRARFSFTFRSD-PESPTSWTIVEHHSSSMPTSPLQLKHV 242 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig70.102.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig70.102.3 >prot_P-littoralis_Contig70.102.3 ID=prot_P-littoralis_Contig70.102.3|Name=mRNA_P-littoralis_Contig70.102.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=676bp MDRSRMSTDAFERVSRLASSPDDPASIAVSLGATELDITLVDNEVRKVLAback to top mRNA from alignment at P-littoralis_Contig70:482723..493931+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig70.102.3 ID=mRNA_P-littoralis_Contig70.102.3|Name=mRNA_P-littoralis_Contig70.102.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=11209bp|location=Sequence derived from alignment at P-littoralis_Contig70:482723..493931+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig70:482723..493931+ >mRNA_P-littoralis_Contig70.102.3 ID=mRNA_P-littoralis_Contig70.102.3|Name=mRNA_P-littoralis_Contig70.102.3|organism=Pylaiella littoralis U1_48|type=CDS|length=2028bp|location=Sequence derived from alignment at P-littoralis_Contig70:482723..493931+ (Pylaiella littoralis U1_48)back to top |