mRNA_P-littoralis_Contig70.93.12 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig70.93.12 vs. uniprot
Match: D7FUF8_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF8_ECTSI) HSP 1 Score: 810 bits (2093), Expect = 1.570e-281 Identity = 441/624 (70.67%), Postives = 481/624 (77.08%), Query Frame = 1
Query: 1 MDRSRMNTSTLDRVSRLASTAGDASSIQISIDAIQWDISLVDKDVRKLVEVTQSKTAKTYAGTSNATEQGRAFLTKQLDILMKEKAQYKEKKQALLQLQDELPRIQEE---KAPARKSRLLQASRTHAADQKDVAATTLIWKDTVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAWQGADGETVQKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPTAPAGLKRVGPNADVVKVTPKKVEITPDQKAVAATTIAWKKTVTLGTKDAPRKTADLYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGQFAVQAGTYTFAWQGQDGATVEKRARFSFTFRRQKPGSPQPWIIVEHHSSSMPNAPSELKRVEAAVDVDTIVQGVSEVSVAAPPAASKGLYMLFLILFLKVKSIFRALF--GGGDSRDETTSASAPKAPEEVAEPEEDNTSSQGEKVVPEAEEPADASSQETPADTHQIEVKARIGARGLGLILGKEEDGTRWNVKGFSVMPDGEPNPAAVAGIEEGDKLYMLDGVKLGSYKEGMERFKSKNGTAVITVLRQGAIAI 1857
M+R RM+T+TLDRVSRLAS GDA+SI +S+ I WDI LVD+DVRKL+ Q + +TYAGTSN TEQGRAFL KQLD LMKEKAQYKEK+ ALLQLQDELP I E+ APA KS + + T A DQK VA TTL+WK+TVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFA+QAGTYTFA+QGADG TV+KRARFSFTFRRD+PGSPQPWTIVEHHSSSMPTAPAGLKRVGPNAD+VKVTPKKVEITPDQKAVAATTI WK TVTLGT DAP+KTA LYA DAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRL+EYTPAPVRVYGQFAV+AGTYTFAWQG DG TVEKRARFSFTFRR KPGSPQPW IVEHHSSSMP AP+ELK VE VD+DTIVQ VSEVSVA P GDS A+P S+G+ P DTH ++V +G GLGL+LGKEE G+RW VKGF MPDG+PNPA+ GIE GD L LDGV LGSYK+GME FK ++G+ VITVLRQ I I
Sbjct: 1 MERGRMDTTTLDRVSRLASNVGDAASISVSLGQIDWDIKLVDQDVRKLLAAVQGTSKQTYAGTSNETEQGRAFLQKQLDGLMKEKAQYKEKRLALLQLQDELPGIPEDGEYSAPAGKSPGV--ATTEAEDQKAVADTTLVWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGSPQPWTIVEHHSSSMPTAPAGLKRVGPNADLVKVTPKKVEITPDQKAVAATTIVWKDTVTLGTDDAPKKTAALYAADAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKPVEPEVDMDTIVQAVSEVSVADKPXXXXXXXXXXXXXXXXXXXXXXXXXXEASGDS----------------AKP------SEGQTFKP---------------DTHAVDVTVSLGQHGLGLVLGKEEAGSRWAVKGFRDMPDGQPNPASAGGIEVGDTLQKLDGVTLGSYKDGMEMFKKQSGSVVITVLRQDEITI 585
BLAST of mRNA_P-littoralis_Contig70.93.12 vs. uniprot
Match: D7FN21_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN21_ECTSI) HSP 1 Score: 744 bits (1922), Expect = 1.490e-255 Identity = 406/628 (64.65%), Postives = 470/628 (74.84%), Query Frame = 1
Query: 1 MDRSRMNTSTLDRVSRLASTAGDASSIQISIDAIQWDISLVDKDVRKLVEVTQSKT-AKTYAGTSNATEQGRAFLTKQLDILMKEKAQYKEKKQALLQLQDELPRIQEEK-----APARKSRLLQASRTHAADQKDVAATTLIWKDTVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAWQGADGETVQKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPTAPAGLKRVGPNADVVKVTPKKVEITPDQKAVAATTIAWKKTVTLGTKDAPRKTADLYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGQFAVQAGTYTFAWQGQDGATVEKRARFSFTFRRQKPGSPQPWIIVEHHSSSMPNAPSELKRVE---AAVDVDTIVQGVSEVSVAAPPAASKGLYMLFLILFLKVKSIFRALFGGGDSRDETTSASAPKAPEEVAEPEEDNTSSQGEKVVPEAEEPADASSQETPADTHQIEVKARIGARGLGLILGKEEDGTRWNVKGFSVMPDGEPNPAAVAGIEEGDKLYMLDGVKLGSYKEGMERFKSKNGTAVITVLRQGAIAI 1857
M+R+RM+TSTLDRVSRLAS GDA+SIQ+S+ A++WDI LVD DVRKL+ Q K A+TYAGTSN TEQGRAFL KQLD LM EKAQYKEK+ ALLQLQ ELP ++E++ AP ++ A+ T D+ VAATT++WKDTVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELR+VEYTPVAVRVYGDFAVQAGTYTFA+QGADG TV+KRARFSFTFRRD P SP PWTIVEHHSSSMP APAGLKRVGPNA++VKVTPK++E+TP+ KA + TTI WK TVTLGT+DAP+KT+ LY EDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRL+EY+PAP RVYGQFAVQAGTYTFAWQG D TVEKRARFSFTFRR P SP PW IVEHHSSSMP+AP+ LKRVE AAV + +V+ V A P ++ + + +E S A + P+ P+E E VP TH ++V +G+ GLG+ILG+E++GTRW VKGF MPDG+ PA VAG+E GD L L+GV LGSYKEGM FK + G+ +T+LRQ I I
Sbjct: 1 MERTRMDTSTLDRVSRLASNVGDATSIQVSLGALEWDIKLVDGDVRKLLSCLQGKPGAQTYAGTSNETEQGRAFLKKQLDGLMAEKAQYKEKRLALLQLQQELPNLEEDEEYAAGAPEPEAPAPPAAPTEEEDKAAVAATTVVWKDTVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRLVEYTPVAVRVYGDFAVQAGTYTFAFQGADGATVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPNAPAGLKRVGPNAELVKVTPKELEVTPEMKAGSETTIVWKDTVTLGTEDAPKKTSALYPEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYSPAPARVYGQFAVQAGTYTFAWQGNDDETVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPSAPAGLKRVENDPAAVMDEVVVEDAPAVVAAEEPXXXXX--------XXXAEAEPDVVXXXXXAAEEPASEEAEEVPDFSVVPDE-------EPFVP---------------PTHPVDVTITVGSNGLGVILGEEKEGTRWTVKGFRNMPDGDKGPAEVAGVEVGDTLQKLEGVILGSYKEGMAMFKKQTGSFSLTILRQDEITI 598
BLAST of mRNA_P-littoralis_Contig70.93.12 vs. uniprot
Match: A0A6H5LB09_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB09_9PHAE) HSP 1 Score: 758 bits (1957), Expect = 4.610e-246 Identity = 416/623 (66.77%), Postives = 467/623 (74.96%), Query Frame = 1
Query: 1 MDRSRMNTSTLDRVSRLASTAGDASSIQISIDAIQWDISLVDKDVRKLVEVTQSKT-AKTYAGTSNATEQGRAFLTKQLDILMKEKAQYKEKKQALLQLQDELPRIQEEKAPARKSRLLQASRTHAADQKDVAATTLIWKDTVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAWQGADGETVQKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPTAPAGLKRVGPNADVVKVTPKKVEITPDQKAVAATTIAWKKTVTLGTKDAPRKTADLYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGQFAVQAGTYTFAWQGQDGATVEKRARFSFTFRRQKPGSPQPWIIVEHHSSSMPNAPSELKRVE---AAVDVDTIVQGVSEVSVAAPPAASKGLYMLFLILFLKVKSIFRALFGGGDSRDETTSASAPKAPEEVAEPEEDNTSSQGEKVVPEAEEPADASSQETPADTHQIEVKARIGARGLGLILGKEEDGTRWNVKGFSVMPDGEPNPAAVAGIEEGDKLYMLDGVKLGSYKEGMERFKSKNGTAVITVLRQGAIAI 1857
M+R+RM+TSTLDRVSRLAS GDA+SIQ+S+ A++WDI LVD DVRKL+ Q K A+TYAGTSN TEQGRAFL KQLD LM EKAQYKEK+ ALLQLQ ELP++QE++ +AAD+ VAATT+IWKDTVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFA+QGADGETV+KRARFSFTFRRD PGSP PWTIVEHHSSSMP APAGLKRVGPNA++VKVTPKK+EITPD KAV+ TTI WK TVTLGT+DAP+KTA LYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRL+EYTPAP RVYGQFAVQAGTYTFAWQG DG TVEKRARFSFTFRR P SP PW IVEHHSSSMP+AP LKRVE AAV D +V+ V A P + ++ + + P+ P+E E VP TH ++V +G+ GLGL+LG+E++GTRW VKGF MPDG+ PA VAG+E GD L L+GV LGSYKEGM FK + G+ +TVLRQ I I
Sbjct: 1144 MERTRMDTSTLDRVSRLASNVGDATSIQVSLGALEWDIKLVDGDVRKLLSCLQGKPGAQTYAGTSNETEQGRAFLKKQLDGLMAEKAQYKEKRLALLQLQQELPKLQEDEE-------------YAADKAAVAATTIIWKDTVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGADGETVEKRARFSFTFRRDHPGSPTPWTIVEHHSSSMPNAPAGLKRVGPNAELVKVTPKKLEITPDMKAVSETTIVWKNTVTLGTEDAPKKTAALYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPARVYGQFAVQAGTYTFAWQGNDGETVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPSAPDGLKRVENDPAAVMDDVVVEEAPAVVAAEEPEEPA-----VVADEPAAEAEPDVVXXXXXXXXXXXXXXXXEVPDFSVVPDE-------EPFVP---------------TTHPVDVTVTVGSHGLGLVLGEEKEGTRWTVKGFRNMPDGDKGPAEVAGVEVGDTLQKLEGVVLGSYKEGMAMFKKQTGSFSLTVLRQDEITI 1726
BLAST of mRNA_P-littoralis_Contig70.93.12 vs. uniprot
Match: A0A6H5K0Z5_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0Z5_9PHAE) HSP 1 Score: 676 bits (1743), Expect = 1.420e-228 Identity = 386/656 (58.84%), Postives = 447/656 (68.14%), Query Frame = 1
Query: 1 MDRSRMNTSTLDRVSRLASTAGDASSIQISIDAIQWDISLVDKDVRKLVEVTQSKTAKTYAGTSNATEQGRAFLTKQLDILMKEKAQYKEKKQALLQLQDELPR-----IQEEKAPAR------------------------KSRLLQASR----------THAADQKDVAATTLIWKDTVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAWQGADGETVQKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPTAPAGLKRVGPNADVVKVTPKKV--EITPDQKAVAATTIAWKKTVTLGTKDAPRKTADLYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGQFAVQAGTYTFAWQGQDGATVEKRARFSFTFRRQKPGSPQPWIIVEHHSSSMPNAPSELKRVEAAVD-VDTIVQGVSEVSVAAPPAASKGLYMLFLILFLKVKSIFRALFGGGDSRDETTSASAPKAPEEVAEPEEDNTSSQGEKVVPEAEEPADASSQETPADTHQIEVKARIGARGLGLILGKEEDGTRWNVKGFSVMPDGEPNPAAVAGIEEGDKLYMLDGVKLGSYKEGMERFKSKNGTAVITVLRQ 1842
MDRSRM+T+ +RVSR+AS A DA SI +S+ A DI LVD +VR+ + +TYAG +N T G ++L KQL+ LMKEKAQ+KEKK AL QLQ ELP+ + +APA K+ ++ + T D++ VA TTL+WK+TVTSGTYDAPKKTAALYAED VLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFA+QG DG TV+KRARFSFTFRR +PGSP+PWTIVEHHSSSMPTAPAGLKRVG +A PKK+ EITPDQKAVA TTI WK TVTLGT DAP+KTA LYA DAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYG+FAVQAGTYTFAW+G DG TVEKRARFSFTFRR KPGSP+PW IVEHHSSSMP+AP+ELK VE D +D + Q V+++S + ++S T S P +G+ + E+ + H ++V A +G+ GLGL+LGKEE GTRW V GF MPDG+PNPA AGIE GD L + GV LG+YKEG+E FK G V+TV RQ
Sbjct: 1 MDRSRMSTNAFERVSRVASGAKDAESIAVSLGATDLDIELVDNEVRRALAAIHGTKKETYAGRTNETAAGVSYLKKQLERLMKEKAQFKEKKLALQQLQQELPKRAAKYAERREAPAXXXXXXXXXXXXXXPAATGGFLSSLKNMIISPAPAEPSPAATVPTPEEDRQAVADTTLVWKETVTSGTYDAPKKTAALYAEDAVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGPDGVTVEKRARFSFTFRRGRPGSPRPWTIVEHHSSSMPTAPAGLKRVGQDA-----MPKKIVKEITPDQKAVAETTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGEFAVQAGTYTFAWEGDDGDTVEKRARFSFTFRRGKPGSPRPWTIVEHHSSSMPDAPAELKHVEPEDDGIDYVAQAVADLSATSSVSSS------------------------------TLPPSPPPR--------------KGQAMAAFTED----------VNHHSVDVTANVGSCGLGLVLGKEEQGTRWVVNGFRSMPDGKPNPAEAAGIEVGDTLQRVGGVPLGTYKEGIELFKKLRGPVVLTVCRQ 597
BLAST of mRNA_P-littoralis_Contig70.93.12 vs. uniprot
Match: A0A6H5JT29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT29_9PHAE) HSP 1 Score: 666 bits (1719), Expect = 2.760e-227 Identity = 350/450 (77.78%), Postives = 377/450 (83.78%), Query Frame = 1
Query: 1 MDRSRMNTSTLDRVSRLASTAGDASSIQISIDAIQWDISLVDKDVRKLVEVTQSKTAKTYAGTSNATEQGRAFLTKQLDILMKEKAQYKEKKQALLQLQDELPRIQEEKAPARKSRLLQASRTHAADQKDVAATTLIWKDTVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAWQGADGETVQKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPTAPAGLKRVG---------------------PNADVVKVTPKKVEITPDQKAVAATTIAWKKTVTLGTKDAPRKTADLYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGQFAVQAGTYTFAWQGQDGATVEKRARFSFTFRRQKPGSPQPWIIVEHHSSSMPNAPSELKRVEAA 1287
M+R RM+T+TLDRVSRLAS GDA+SI +S+ I WDI LVD+DVRKL+ Q + +TYAGTSN TEQGRAFL KQLD LMKEKAQYKEK+ ALLQLQDELP I E+ A +DQK VA TTL+WK+TVTSGTYDAPKKTAALYAED VLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFA+QAGTYTFA+QGADG TV+KRARFSFTFRRD+PGSPQPWTIVEHHSSSMPTAPAGLKRVG PNAD+VKVTPKKVEITPDQKAVAATTI WK TVTLGT DAP+KTA LYA DAVLWGTVSEEVRETPEQIYDYFDFFARLPKLR++EYTPAPVRVYG+FAV+AGTYTFAWQG+DG TVEKRARFSFTFRR KPGSPQPW IVEHHSSSMP AP+ELK V A
Sbjct: 1 MERGRMDTTTLDRVSRLASNVGDAASISVSLGQIDWDIKLVDQDVRKLLAAVQGTSKQTYAGTSNETEQGRAFLQKQLDGLMKEKAQYKEKRLALLQLQDELPGIPEDAA--------------YSDQKAVADTTLVWKETVTSGTYDAPKKTAALYAEDAVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGSPQPWTIVEHHSSSMPTAPAGLKRVGKLYSVRVFLPVVVGCEFFKVGPNADLVKVTPKKVEITPDQKAVAATTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRVVEYTPAPVRVYGEFAVEAGTYTFAWQGEDGKTVEKRARFSFTFRRGKPGSPQPWTIVEHHSSSMPIAPAELKPVGVA 436
BLAST of mRNA_P-littoralis_Contig70.93.12 vs. uniprot
Match: D7FUF9_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF9_ECTSI) HSP 1 Score: 536 bits (1382), Expect = 5.500e-174 Identity = 295/494 (59.72%), Postives = 343/494 (69.43%), Query Frame = 1
Query: 28 TLDRVSRLASTAGDASSIQISIDAIQWDISLVDKDVRKLVEVTQSKTA--KTYAGTSNATEQGRAFLTKQLDILMKEKAQYKEKKQALLQL----------------------QDELPRIQEEKAP------------ARKSRL------------LQA-----SRTHAADQKDVAATTLIWKDTVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAWQGADGETVQKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPTAPAGLKRVGPNADVVKVTPKKVEITPDQKAVAATTIAWKKTVTLGTKDAPRKTADLYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGQFAVQAGTYTFAWQGQDGATVEKRARFSFTFRRQKPGSPQPWIIVEHHSSSMPNAPSELKRVEAAVDVDTIVQGVSEVSVAAPPAA 1350
TL +R +S + +A+S +S+ AI WD++LVDKDVR+L+EV Q A KTYAG SN+T QG+AFL Q+D LM+EKAQYKEK+ L+Q ELP+ P +R+ L+A S T A D++ VA TT++WKDTVTSGTYDAPKKTAALYA DG LWGTVSEEVRDTP+QIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTF+WQ DG V+KRARFSFTFRRD PG+ +PWTIVEHHSSSMPTAPAGLK VG + + E TPDQKAVAAT + WK TVT+GT D PRKTADLYA+DA LWGTVSEEVR+TPEQIY YFD+FARLP LRL+EYTP VRVYG FAVQAGTYTF+WQ DG TVEKRARFSFTFRR P PQ W IVEHHSSSMP AP+ LK + ++ + + + P++
Sbjct: 2 TLPARARQSSVSDEAASTAVSLAAIDWDVALVDKDVRRLLEVLQDDGAEGKTYAGRSNSTPQGKAFLQNQVDGLMREKAQYKEKRMVLMQRXXXXXXXXXXXXXXXXXSVANSSSELPKATPPSLPQTPTNDNSTHSTSRRGSFPLGPRPSPAPGSLRAPSPAKSATEAEDRRAVAETTVLWKDTVTSGTYDAPKKTAALYAPDGTLWGTVSEEVRDTPQQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFSWQADDGAIVEKRARFSFTFRRDNPGTERPWTIVEHHSSSMPTAPAGLKAVGVGPGIPRGPKVVKETTPDQKAVAATAVVWKDTVTMGTDDTPRKTADLYAQDATLWGTVSEEVRDTPEQIYAYFDYFARLPALRLVEYTPVAVRVYGDFAVQAGTYTFSWQDNDGDTVEKRARFSFTFRRD-PNKPQQWAIVEHHSSSMPTAPAGLKPAMSGTNLADLTHDTGKATATTAPSS 494
BLAST of mRNA_P-littoralis_Contig70.93.12 vs. uniprot
Match: A0A6H5JX02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX02_9PHAE) HSP 1 Score: 474 bits (1221), Expect = 2.720e-152 Identity = 234/323 (72.45%), Postives = 261/323 (80.80%), Query Frame = 1
Query: 379 DQKDVAATTLIWKDTVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAWQGADGETVQKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPTAPAGLKRVGPNADVVKVTPKKVEITPDQKAVAATTIAWKKTVTLGTKDAPRKTADLYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGQFAVQAGTYTFAWQGQDGATVEKRARFSFTFRRQKPGSPQPWIIVEHHSSSMPNAPSELKRVEAAVDVDTIVQGVSEVSVAAPPA 1347
D++ VA TT++WKDTVTSGTYDAPKKTAALYA DG LWGTVSEEVRDTP+QIYAYFDYFARLPEL+VVEYTPVAVRVYGDFAVQAGTYTF+WQ DG V+KRARFSFTFRRD PG+ +PWTIVEHHSSSMPTAPAGLK VG + + E TPDQKAVAAT + WK TVT+GT D PRKTADLYA+DA LWGTVSEEVR+TPEQIY YFD+FARLP LRL+EYTP VRVYG FAVQAGTYTF+WQ DG TVEKRARFSFTFRR P PQ W IVEHHSSSMP AP+ LK + ++ + + + P+
Sbjct: 27 DRRAVAETTVLWKDTVTSGTYDAPKKTAALYAPDGTLWGTVSEEVRDTPQQIYAYFDYFARLPELKVVEYTPVAVRVYGDFAVQAGTYTFSWQADDGTIVEKRARFSFTFRRDNPGTDRPWTIVEHHSSSMPTAPAGLKAVGVGPGIPRGPKVVKETTPDQKAVAATAVVWKDTVTMGTDDTPRKTADLYAQDATLWGTVSEEVRDTPEQIYAYFDYFARLPALRLVEYTPVAVRVYGDFAVQAGTYTFSWQDNDGTTVEKRARFSFTFRRD-PSKPQQWAIVEHHSSSMPTAPAGLKPAMSGTNLADLTHDTGKATATTAPS 348
BLAST of mRNA_P-littoralis_Contig70.93.12 vs. uniprot
Match: D7FY20_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY20_ECTSI) HSP 1 Score: 369 bits (948), Expect = 1.910e-108 Identity = 194/343 (56.56%), Postives = 246/343 (71.72%), Query Frame = 1
Query: 379 DQKDVAATTLIWKDTVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAWQGADGETVQKRARFSFTFRRDKP-GSPQPWTIVEHHSSSMPTAPAGL-------------KRVGPNADVVKVTPKKVEITPDQKAVAATTIAWKKTVTLGTKDAPRKTADLYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGQFAVQAGTYTFAWQGQDGATVEKRARFSFTFRRQ-KPGSPQPWIIVEHHSSSMPNAPSELKRVEAAVDVDTIVQGVSEVSVA---APPAAS 1353
D+K V+A + W + VTSG DAP++TAALYAEDG LW TVSEEV +TP+QI AYF+ FARLP+LR+VEYTPVA RVYG+FAV AGTYTFAW+G DG V+KRARFSFTFRRD+ G+P+PW IVEHHSSSMPTAP + V P K + DQ+AVAA T+ W + V LGT +APRKTA LYA+DA LWG+VS+ +R+TP+ IY YFD F+RLP+LRL+++ P VRVYG FAVQAGTYTF+W+G+ GA+VE++ARF+FTFRR PG+P W IVEHH+ P L RV + VD+ + + +++V A APP+ +
Sbjct: 354 DKKAVSAAAIAWTNAVTSGARDAPRRTAALYAEDGSLWETVSEEVCNTPQQITAYFERFARLPQLRMVEYTPVAARVYGEFAVLAGTYTFAWRGEDGGPVEKRARFSFTFRRDRTRGAPRPWLIVEHHSSSMPTAPXXXXXXXXXXXXXXXXEPVDPTPPRTKAAKIGNDPNADQRAVAAATVMWTRAVALGTDEAPRKTAALYAKDATLWGSVSDAIRDTPDLIYKYFDKFSRLPELRLVDFAPVTVRVYGDFAVQAGTYTFSWRGEGGASVERQARFTFTFRRDGNPGNPYGWSIVEHHA-----VPVGLSRVSSGVDLADLSKSLADVRSATATAPPSTT 691
BLAST of mRNA_P-littoralis_Contig70.93.12 vs. uniprot
Match: A0A6H5JTS4_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTS4_9PHAE) HSP 1 Score: 286 bits (733), Expect = 5.400e-80 Identity = 229/626 (36.58%), Postives = 292/626 (46.65%), Query Frame = 1
Query: 85 ISIDAIQWDISLVDKDVRKLVEVTQSKT-AKTYAGTSNATEQGRAFLTKQLDILMKEKAQYKEKKQALLQLQDEL-----------PRIQEEKAPA---RKSRLLQASRTHAADQ-KDVAATTLIWKDTVTSGTYDAPKKTAALYAEDGVLWGT------------VSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAWQGADGETVQKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPTAPAGLK--RVGPNADVVKVTPKKVEITPDQKAVAATTIAWKKTVTLGTKDAPRKTADLYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGQFAVQAGTYTFAWQGQDGATVEKRARFSFTFRRQKPGSPQPWIIVEHHSSSMPNAPSE--LKRVEAAVDVDTIVQGVSEVSV-------AAPPAASKGLYMLFLILFLKVKSIFRALFGGGDSRDETTSASAPKAPEEVAEPEEDNTSSQGEKVVPEAEEPADASSQ-ETPADTHQIEVKARIGARGLGLILGKEEDGTRWNVKGFSVMPDGEPNPAAVAGIEEGDKLYMLDGVKLGSYKEGMERFKSKNGTAVITVLRQ 1842
+ + A+ W+I+ VD +VR+++ Q K+ YAG S + L K LD LM+EK +YKEK+ ALL+LQD+ P+ +EK + + + S + A ++ + V+ TTL W +TVT GTYDAPK+TA LYA D +LWGT VSE VRDTPEQIYAYFDYFARLPEL+VVEYTP VRVYGDFA QAG+YTF+WQG DG TV+ RARFSFTFRR P SPQPWTIVEHHSSSMPT+P L+ RVG N + L + + W G A A + S QP ++S+ +AP + E A D Q +E+ A + A GG R ++ P APE E +SS E D + + A H I A +G GLGL+LG+E++GTRW VKGF VMPDG+PNPA AGIE GD L L GV LGSYK+G+E FK + G V+T+ RQ
Sbjct: 100 LPVVAVDWEIARVDGEVREVLGALQGKSEGSPYAGKS------KDVLEKTLDDLMREKTEYKEKRLALLELQDDQLKAPGSDAADKPQQPQEKTGSGAVAEVAIASPSGSFAEEETRSVSETTLAWTETVTRGTYDAPKRTAELYAPDAILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAGSYTFSWQGTDGSTVEMRARFSFTFRRAGPSSPQPWTIVEHHSSSMPTSPLELELNRVGLNTN------------------------------LAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKASRSPIWSGLFRAFTSSAASAA--------SSDQP------AAASVASAPEAKTMTAEEEAEDARAAEQARAEIXXXXXXXXXARERSXXXXXXXXXXXXXXXXXXXXXAETKGG--RASSSGLQTPPAPESEHHEEVRASSSAVSSSAVARELSFDGTGAGKDKAKIHDI--TATVGPLGLGLMLGEEKEGTRWVVKGFRVMPDGKPNPAEAAGIEVGDTLQKLGGVPLGSYKDGIEIFKKQRGPVVLTISRQ 671
BLAST of mRNA_P-littoralis_Contig70.93.12 vs. uniprot
Match: A0A6H5JSB2_9PHAE (DUF4440 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JSB2_9PHAE) HSP 1 Score: 209 bits (531), Expect = 1.560e-57 Identity = 103/141 (73.05%), Postives = 115/141 (81.56%), Query Frame = 1
Query: 379 DQKDVAATTLIWKDTVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAWQGADGETVQKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPTAPAGLKRV 801
D+K V TT+ WK+ VT GT DAP+KTA LYA DGVLWGTVSEEVRDTPE+IY YFDYFARLP LR+ E+TPV++RVYGDFA +AGTYTF WQG DG +KRARFSFTFR D P SP WTIVEHHSSSMPT+P LK V
Sbjct: 103 DRKGVEQTTIRWKEMVTLGTPDAPRKTADLYAVDGVLWGTVSEEVRDTPEEIYDYFDYFARLPNLRLSEFTPVSLRVYGDFATEAGTYTFKWQGEDGVPKEKRARFSFTFRSD-PESPTSWTIVEHHSSSMPTSPLQLKHV 242 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig70.93.12 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig70.93.12 >prot_P-littoralis_Contig70.93.12 ID=prot_P-littoralis_Contig70.93.12|Name=mRNA_P-littoralis_Contig70.93.12|organism=Pylaiella littoralis U1_48|type=polypeptide|length=620bp MDRSRMNTSTLDRVSRLASTAGDASSIQISIDAIQWDISLVDKDVRKLVEback to top mRNA from alignment at P-littoralis_Contig70:439835..451649- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig70.93.12 ID=mRNA_P-littoralis_Contig70.93.12|Name=mRNA_P-littoralis_Contig70.93.12|organism=Pylaiella littoralis U1_48|type=mRNA|length=11815bp|location=Sequence derived from alignment at P-littoralis_Contig70:439835..451649- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig70:439835..451649- >mRNA_P-littoralis_Contig70.93.12 ID=mRNA_P-littoralis_Contig70.93.12|Name=mRNA_P-littoralis_Contig70.93.12|organism=Pylaiella littoralis U1_48|type=CDS|length=1860bp|location=Sequence derived from alignment at P-littoralis_Contig70:439835..451649- (Pylaiella littoralis U1_48)back to top |