prot_P-littoralis_Contig70.88.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig70.88.1
Unique Nameprot_P-littoralis_Contig70.88.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1269
Homology
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BLAST of mRNA_P-littoralis_Contig70.88.1 vs. uniprot
Match: A0A6H5KHG8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG8_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 5.510e-18
Identity = 73/171 (42.69%), Postives = 86/171 (50.29%), Query Frame = 0 
Query: 1116 LEVVADRGLLCLYWTDVGGGRWVLDDDLRLSNGVVGVTKGPAPATADLAFPNQXXXXXXXXXXXSGAYAGIDSEAGGGC---QHAAXXXXXXXXXXXXXXXXXXXXQDGVASETEDEADL---------------APRWSWTEGHPTWLLDSSEIQGWVETNDLLVVCETD 1268
            L   AD G LCLYW++  GGRWVLDDDLRLSNGVVGVT+ PAP  ADLAF +Q             A A  D E G G    +            XXXXXX     + G ASE +   +                A   S    H  WLLDS  +QGWV+ +D++VVCETD
Sbjct:  467 LPEAADGGTLCLYWSEADGGRWVLDDDLRLSNGVVGVTEDPAPPEADLAFLDQRHRGRPPQ-----AGATSDGEGGAGDGDRERGTRSGFASEDEXXXXXXVAVEREGGDASEEKVSVESGGATVGGPEGAVGGRALESSMEAAHRAWLLDSPRLQGWVKADDMVVVCETD 632
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BLAST of mRNA_P-littoralis_Contig70.88.1 vs. uniprot
Match: D7FUF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF3_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 1.800e-14
Identity = 82/190 (43.16%), Postives = 99/190 (52.11%), Query Frame = 0 
Query: 1116 LEVVADRGLLCLYWTDVGGGRWVLDDDLRLSNGVVGVTKGPAPATADLAFPNQXXXXXXXXXXXSGAYAGIDSEA--------------------GGGCQHAAXXXXXXXXXXXXXXXXXXXXQDGVASETEDEADL-----------------APRWSWTEGHPTWLLDSSEIQGWVETNDLLVVCETD 1268
            L  VAD G LCLYW++  GGRWVLDDDLRLSNGV+GVT+ PAP  ADLAF +Q           +    G   +A                    GG  +   XXXXXXXXXXXXXXXXXXXX   V    E+E  +                 A   S    H  WLLDS  ++GWV+ +D++VVCET+
Sbjct:  464 LPQVADGGTLCLYWSEADGGRWVLDDDLRLSNGVLGVTEDPAPPEADLAFLDQRHRGSPPQAGAASEDEGGAGDADRGRGTRSXXXXXXXXXXXDGGAVEXXXXXXXXXXXXXXXXXXXXXXXXXXVGFACEEEVSVESGGTTVGGPEGAAGGRALESSMEAAHRAWLLDSPRLRGWVKADDMVVVCETE 653
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig70.88.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KHG8_9PHAE5.510e-1842.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUF3_ECTSI1.800e-1443.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 532..554
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 485..579
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1003..1026
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 834..862
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 174..224
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 887..920
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 597..722
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 489..504
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 612..626
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 894..913
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 648..682
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..242
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 505..522

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig70contigP-littoralis_Contig70:399316..405246 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig70.88.1mRNA_P-littoralis_Contig70.88.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig70 399261..407096 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig70.88.1 ID=prot_P-littoralis_Contig70.88.1|Name=mRNA_P-littoralis_Contig70.88.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1269bp
MEDIEQSPHLRSWHRSHATQERERQWIVGVMREFELRTPSRNRNSCAATS
SSSCPSTAAAAAAAAAAAAAASPATNGGGPAAQPPAAAPAPTPAPAAAAR
AHHRPRASVSPKLSRGRDPDSPSGTSWVQRHREGGDHCSSSPRLDTAGLA
AGKHSGLYWRGGNGSGGGGGAEDQDTAVSTSATATALDSVDSSQNSSAGT
TKNSTTSRGPAMRFSSSSFGVHDSPVDLRSTGRGRGEAALGLSSSPRLSG
MLLFHEEKREDISPPRPRAFWREEWHGATAAGGGVGEGLSVNQCVRTNRP
CSLVASDNAFSAVDDKGALEQRPGVGHCRCRRCCCRNYASSGHECLAGAV
GCRCRDDSEKDLQRRRCCCRGPSLFRDRRAAANRWQEKSDDADTDARADL
LASAKQRRVSSVVEREQTRRKGKGEWEEYAGIYYSGTDSSHISGGGEING
SGGEVHSSGNGSLSAVRFALLTAVTVAAFAAGTLAGPPHRHRSPPPPPPS
VSSSEYTQPLPSHPSYESTTRDVLHATRGGARRASRNNTVSQRTQPSASG
AAKDRRQASLTDGAGGDKQPGGAKNTAATSATISAARGVLNAPAAISSGR
EAAANTPGNRPVERQPKRRYRLASGGEHDEGTAVTIEAVDAEVNGGSGSH
EDGSTGTNLSPVPLGPSSRPSSPRSSSGHGGADAGSTVGDRKKLSEGRRR
PRRRYEGRSKTNPSGNHPVVFGADPAAFAQSLGSAANSLAGFPNARSDDA
TARRAAMSKSAARSACNLLVWSSKSDFTVGVDRNDDGGCDTDAAWEDVRD
GGDVRAPFFSLSTAKRGSPGGGYGGASLDSIESGAEAVPRVSTQRQSAAA
AHGAHSFPGAEEAGREAQLVVAGEVMLGASPSSLTLTSTTATALERERGE
REAPVDSLKGAKNGRGRRRNQAPVSSCRGLFLSGSDARASWVGRYAYVSV
ETPGDEGEFPETDAASAPPMSTPYYCLEKTSYFDSSAEAFVAADTAGGGI
HVSLEDVRGQQRDEQPQAGPPPWDEDEWVEREDVVLADQPKEAVAALVWE
ESATTAAMMTPCETDLSLPKKPAATIATAGVPALAAKGATLSLGLPSASA
ALAAEAKPGEDESVPLEVVADRGLLCLYWTDVGGGRWVLDDDLRLSNGVV
GVTKGPAPATADLAFPNQQQQQQQQGCSCSGAYAGIDSEAGGGCQHAAGV
DGGARRGCRYGNGVAGGGQDGVASETEDEADLAPRWSWTEGHPTWLLDSS
EIQGWVETNDLLVVCETD*
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