prot_P-littoralis_Contig70.85.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig70.85.2
Unique Nameprot_P-littoralis_Contig70.85.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1408
Homology
BLAST of mRNA_P-littoralis_Contig70.85.2 vs. uniprot
Match: D7FUF2_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF2_ECTSI)

HSP 1 Score: 454 bits (1169), Expect = 1.340e-140
Identity = 299/724 (41.30%), Postives = 346/724 (47.79%), Query Frame = 0
Query:   33 CTACDKPVFQTTRPSFSCRGCRMLFHGKCAGYDPRKRQFPPPDWICPRCPDGERGPNEEVLHPSLRGLAAVKQPKGSMPWCPVCLRDNRGPSSDAERAMDIRCHDCGFRPHPACWRNLQIGPDGKRPCVECQRRRDGGIPCGNNPMWLRLKAARVQGGFGHNPLCRKRSSEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPPSTNCSYSANRKGRLLHRIGAAGDATDTAPNTPSPXXXRPYSNGGGTTPGSTHGKARPRKGAGAXXXXXXXXXXXXXXXXXXXXXXXXHTAATPATGTGSPTKVHSTNGKVRHRKGAAAAAPRISAPNAGGGSGXXXRSNKNGKRNLNYDGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDAAANVSHSGKGDAPEAAAXXXXXXXXXXXXXXAREQDPRTPRKRVSTGAGGNRTVCQNCKRPRSGGQKSSGVFCGSCGGWWHNSAHCAGANGCPESGKWVGGWRCRGCLSTWEKGLKDRAAKVVEAWAVHEARREQDSVGHRRAAAAAAAESEDAQRYGFAVNKIEVPPVTHPPAGILPFLDVESVKDRGFRLARLTREDCCFMGPDCVVAKVDLCWKHRIFAIIEGAFDPQIQPLMDFLGDRKGLPCKISGKAASGEASSTMGDYRSKLADHHLKDKPQ---KESPGTFFLDTASGQVEVLNWLPTDPLMGGLMPEAERGGLLHHLMGERCKFG 753
            C AC K   +   PSF+CR CR L+H  C GY  R RQ PPPDWICP CP GERGP+ +V H S+ G   VKQ KG+MPWCP+CLRD+R P+S     ++                                 +R             RL+     G                                                                +  + G A  T   T             G T GS +  A PR+                                               N   R ++     A +  A  A GG        +NG         XXXXXXXXXX                                                                            TVC  CK+ RSG  KSSG  CG+CG WWHNS HC GA GCPESG+WVGGWRCR CLS WEKGL+DRAAKVVEAW   EARRE+D+  HR  AAAAAAES+ A+R+GF+V  +E+PPV  PPAGILPFLDV+++KD GFRLAR +REDC FMGPDCVVAKVDLCWKHRIFAI+EGAFDPQIQPLMDFL +RK L CK+SGKAASGEASSTMGDYRSKLAD     K     K++PGTFFLDT +GQ +VLNWLPTDPLM GL+PEAERGGL  H+ GERCKFG
Sbjct:  122 CEACGKVFTRDVHPSFACRACRKLYHRSCVGYANRARQSPPPDWICPHCPGGERGPSPQV-HLSVAGKGTVKQRKGNMPWCPICLRDDRLPNSKLVGRLNSGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKR-------------RLEVVSATG--------------------------------------------QDXXXXXXXXXXXXXXXXRRKASSCGAADRTMGETAL----------SGVTSGSLNRGAAPRE---------------------------------------------EENPPARQQR-----ARQXXASTARGGG-------RNGXXXXXXXXXXXXXXXXXXXG---------------------------------------------------------------------------TVCFKCKKKRSGSNKSSGKTCGTCGRWWHNSVHCCGAYGCPESGEWVGGWRCRHCLSLWEKGLRDRAAKVVEAWNDQEARRERDAPLHRETAAAAAAESKAARRHGFSVAAVEIPPVCCPPAGILPFLDVDAIKDTGFRLARFSREDCSFMGPDCVVAKVDLCWKHRIFAIVEGAFDPQIQPLMDFLQERKSLACKLSGKAASGEASSTMGDYRSKLADRIRDGKESAKAKDNPGTFFLDTTTGQADVLNWLPTDPLMKGLIPEAERGGLAEHIHGERCKFG 645          
BLAST of mRNA_P-littoralis_Contig70.85.2 vs. uniprot
Match: D7FUF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF1_ECTSI)

HSP 1 Score: 380 bits (976), Expect = 3.020e-105
Identity = 203/281 (72.24%), Postives = 220/281 (78.29%), Query Frame = 0
Query:  788 MQGKRRDRIGGSTTHMDGMGSFTAIGGIKAGMKSVTAFESEDCGTALAVAKFKAFAKPGGSSYVVNDRIDDDDTLRNRLTNAGVRYRTFPIREGEAYLVPSGCLHEFMNVVPCLSVAWNIMPHPANCNVAMDMAEASAREAEAELGVNTDRSISAIEHAPPESMRERQAAWVIKTWLQRGTLLRRRWAAAGHGSGAPAIPVSARCGGRDRSSSVEARRVAGTMAAKHTLPRDMWKRFLFLRPRKHYYE-EVNPVYDGQVVRSVVKIAVATPAARGAAAVAV 1067
            MQGK RDRIGGSTTHMDGMGSFTAIGG+KAG KSVTAFESEDC TALAVAKFKAFAKPGGSSYVVNDRIDDD TLRNRL  AGVRYRTFPIREGEAYLVPSGCLHEFMNV+PCLSVAWNIMPHPANC VAM MAEASA EA+AELGVNTDRS SAIEHAPPESMRER AAWVIKT L+RG LLRRRWA+    +G+       R  G  R  + E+ + A   AA+H LP DMWK+FLF+RP +HYY+  V      +V       A A  AA G   VA+
Sbjct:    1 MQGKGRDRIGGSTTHMDGMGSFTAIGGLKAGEKSVTAFESEDCATALAVAKFKAFAKPGGSSYVVNDRIDDDATLRNRLHRAGVRYRTFPIREGEAYLVPSGCLHEFMNVIPCLSVAWNIMPHPANCEVAMRMAEASAEEAQAELGVNTDRSASAIEHAPPESMRERHAAWVIKTALERGILLRRRWASDPGSAGSSG---GGRVCGPSRPPTAESNKAAAEAAARHKLPADMWKKFLFMRPSEHYYDGHVGSAASQKVAPIPTAAAAAARAAPGGTRVAI 278          
BLAST of mRNA_P-littoralis_Contig70.85.2 vs. uniprot
Match: A0A6H5KVS1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVS1_9PHAE)

HSP 1 Score: 344 bits (882), Expect = 4.020e-93
Identity = 183/258 (70.93%), Postives = 198/258 (76.74%), Query Frame = 0
Query:  806 MGSFTAIGGIKAGMKSVTAFESEDCGTALAVAKFKAFAKPGGSSYVVNDRIDDDDTLRNRLTNAGVRYRTFPIREGEAYLVPSGCLHEFMNVVPCLSVAWNIMPHPANCNVAMDMAEASAREAEAELGVNTDRSISAIEHAPPESMRERQAAWVIKTWLQRGTLLRRRWAAAGHGSGAPAIPVSARCGGRDRSSSVEARRVAGTMAAKHTLPRDMWKRFLFLRPRKHYYEEVNPVYDGQVVRSVVKIAVATPAARGAA 1063
            MGSFTAIGG+KAG KSVTAFESEDC TALAVAKFKAFAKPGGSSYVVNDRIDDD TLRNR   AGVRYRTFPIREGEAYLVPSGCLHEFMNV+PCLSVAWNIMPHPANC VAM MAEAS  EA+AELGVNTDRS SAIEHAPPESMRER AAWVIKT L+RG LLRRRWA+        +      CG   R  + E+ + A   AA+H LP DMWK+FLF+RP +HYY       DG V  +  + A   PAA  AA
Sbjct:    1 MGSFTAIGGLKAGEKSVTAFESEDCATALAVAKFKAFAKPGGSSYVVNDRIDDDATLRNRFHRAGVRYRTFPIREGEAYLVPSGCLHEFMNVIPCLSVAWNIMPHPANCEVAMRMAEASVEEAQAELGVNTDRSASAIEHAPPESMRERHAAWVIKTALERGILLRRRWASDPDSRSGGSSGGGRECG-PSRPPTAESNKAAAETAARHKLPADMWKKFLFMRPSEHYY-------DGHVGSATSQKAAFVPAAAAAA 250          
BLAST of mRNA_P-littoralis_Contig70.85.2 vs. uniprot
Match: L1K4C4_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1K4C4_GUITC)

HSP 1 Score: 177 bits (449), Expect = 1.650e-41
Identity = 121/390 (31.03%), Postives = 195/390 (50.00%), Query Frame = 0
Query:  578 RYGFAVNKIEVPPVTHPPAGILPFLDVESVKDRGFRLARLTREDCCFMGPDCVVAKVDLCWKHRIFAIIEGAFDPQIQPLMDFLGDRKGLPCKISGKAASGEASSTMGDYRSKLADHHLK----DKPQKESPGTFFLDTASGQVEVLNWLPTDPLMGGLMPEAERGGLLHHLMGERC-KFGPFTFGGGRNFPFLESADACAGGNPHAA----KKSQRQYMQGKRRDRIGGSTTHMDGMGSFTAIGGIKAGMKSVTAFESEDCGTALAVAKFKAFAKPGGSSYVVNDRID-------DDDTLRNRLTNAGVRYRTFPIREGEAYLVPSGCLHEFMNVVPCLSVAWNIMPHPANCNVAMD----MAEASAREAEAELGVNTDRSISAIEHAP 947
            RY     ++E P +      + PFL V  +    F L R++ +    M    + + ++   +HR+F I+EGAF+     +  +L DR     ++SG+   GE  + +G Y S +  +       +     + GTF         + + +L T  +    +P      L   L  E+  ++GP+ FGG +     E+A   A  N           +R   +G ++D +GGST H+DGMGS  AIGG+K G K VTA E+ D   AL +A FK++AKPGGSS++ ND +D       +  +L++  T + VR+ TF I  G+AY++P+G  HEF+N  P LS+AWNI+P     + +      +   +  + E +   + DR +SAI+HAP
Sbjct:   49 RYRNPDQRVECPEI------LRPFL-VSPLAGSNFNLCRISFKQMMAMTSSELESAINAAMEHRVFLIMEGAFEVLKTNMDKWLSDRSSFVAQLSGRDRKGELCTELGSYLSAMRSYEKGLSNFECAWSGALGTFTCKNIMLYQDDMLFLNTHDVFSKFLPWGRASLLRDSLDSEQSMQYGPYLFGGDKMRGSCEAAAKDALSNQECQFEPLMSKRRVRYRGDKKDGLGGSTMHLDGMGSLVAIGGLKCGKKLVTAVEACDASLALKIAGFKSYAKPGGSSFLTNDPVDRSFSGEEESCSLKDLWTMSHVRWGTFEISAGDAYVIPAGMPHEFLNQEPSLSIAWNILPSCEQSSASEPWHFLLLLQALHDVETDFSGSPDRMMSAIDHAP 431          
BLAST of mRNA_P-littoralis_Contig70.85.2 vs. uniprot
Match: A0A7S3Y1V6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1V6_HETAK)

HSP 1 Score: 156 bits (395), Expect = 8.640e-38
Identity = 106/324 (32.72%), Postives = 162/324 (50.00%), Query Frame = 0
Query:  628 DCVVAKVDLCWKHRIFAIIEGAFDPQIQPLMDFLGDRKGLPCKISGKAASGEASSTMGDYRSKLADHHLKDKPQKESPGTFFLDTASGQVEVLNWLPTDP-LMGGLMPEAERGGLLHH--LMGERCKFGPFTFGGGRNFPFLESADACAGGNPHAAKKSQRQYMQGKRRDRIGGSTTHMDGMGSFTAIGGIKAGMKSVTAFESEDCGTALAVAKFKAFAKPGGSSYVVNDRIDDDDTLRNRLTNAGVRYRTFPIREGEAYLVPSGCLHEFMNVVPCLSVAWNIMPHPA-NCNVAMDMAEASAREAEAELGVNTDRSISAIEHAP 947
            D +V  +  C ++ +F +IEGAF      LM++L   KG+   +SG+   GE  +T+  + ++L+D    +  Q  + G F    A+ Q+E L  +  +  L    +P  +  GL     + G R ++GP TFGG ++                 A+KS+R         + GGST HMDGMG+  A GG+K G+K +TA   ED   AL  A F  +AKPGGS ++VN  I     +R      G+R+  F +++G+AY++P+G  HEF N+ P +SVAWN +P P      A  +   S  E    L     R   A++ AP
Sbjct:    8 DKLVHLIRECEQNGVFMVIEGAFLNHTVNLMEWLESNKGISTDVSGRDQRGERHATLEAFATRLSDADRANARQDGNVGNFSYFEANKQLEDLGNIAGEKWLFARFLPWGDLSGLAEFTAIDGHRTRYGPSTFGGDKS--------------REVAQKSKRGTGF-----QFGGSTMHMDGMGTTVACGGMKDGLKLITAVAPEDAPQALRAAGFTTYAKPGGSRHLVNPPIGP--AVRRLWARLGIRFACFELKKGDAYVIPAGVPHEFQNLEPSVSVAWNYLPSPGFQSAAACSLLAYSLAELRENLQRQPQRQQEALDFAP 310          
BLAST of mRNA_P-littoralis_Contig70.85.2 vs. uniprot
Match: D8LKX6_ECTSI (Similar to ubiquitin specific protease 48 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKX6_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 1.340e-16
Identity = 54/123 (43.90%), Postives = 66/123 (53.66%), Query Frame = 0
Query:   85 ERGPNEEVLHPSLRGL--AAVKQPKGSMPWCPVCLRDNRGPSSDAERAMDIRCHDCGFRPHPACWRNL-QIGP------------DGKRPCVECQRRRDGGIPCG-NNPMWLRLKAARVQGGF 191
            E GP++  LH SLRG   AA  QP+G+ PWCP CL DNR P      +   RC  CG   H  C R   +  P            DG   C EC+RR DG +  G ++P+WLRLKAAR+ GGF
Sbjct:  525 EHGPDDTHLHESLRGKGGAAPSQPRGNQPWCPNCLGDNRLPGEKTMGSDSKRCPGCGLHTHARCRRKRPEASPGAAGATGGXXAADGSWACDECKRREDGVVVAGGDDPVWLRLKAARLDGGF 647          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig70.85.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FUF2_ECTSI1.340e-14041.30PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
D7FUF1_ECTSI3.020e-10572.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVS1_9PHAE4.020e-9370.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
L1K4C4_GUITC1.650e-4131.03Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
A0A7S3Y1V6_HETAK8.640e-3832.72Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
D8LKX6_ECTSI1.340e-1643.90Similar to ubiquitin specific protease 48 n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 32..82
e-value: 1.3E-5
score: 34.6
coord: 476..530
e-value: 2.5
score: 13.0
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 2..87
e-value: 8.3E-8
score: 34.2
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 32..81
e-value: 5.9E-7
score: 29.3
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 30..84
score: 9.0272
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 205..246
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 315..342
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1129..1260
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 368..382
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..470
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1381..1408
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1178..1193
NoneNo IPR availableCDDcd15489PHD_SFcoord: 476..529
e-value: 8.68918E-4
score: 36.5262
NoneNo IPR availableCDDcd15489PHD_SFcoord: 32..81
e-value: 7.57187E-8
score: 48.0822
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 33..81
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 26..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig70contigP-littoralis_Contig70:386589..398582 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig70.85.2mRNA_P-littoralis_Contig70.85.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig70 386587..398582 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig70.85.2 ID=prot_P-littoralis_Contig70.85.2|Name=mRNA_P-littoralis_Contig70.85.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1408bp
RAAAGARARATVEDEDLEQQLSSPAAPRNAKYCTACDKPVFQTTRPSFSC
RGCRMLFHGKCAGYDPRKRQFPPPDWICPRCPDGERGPNEEVLHPSLRGL
AAVKQPKGSMPWCPVCLRDNRGPSSDAERAMDIRCHDCGFRPHPACWRNL
QIGPDGKRPCVECQRRRDGGIPCGNNPMWLRLKAARVQGGFGHNPLCRKR
SSEDTAAAGATTPDTTPPGVASSSRSAASAPAAGSPPSTNCSYSANRKGR
LLHRIGAAGDATDTAPNTPSPPPPRPYSNGGGTTPGSTHGKARPRKGAGA
AGAAGAPATGAAGVSSPPRSPSKPHTAATPATGTGSPTKVHSTNGKVRHR
KGAAAAAPRISAPNAGGGSGSGGRSNKNGKRNLNYDGGEEEEEEEYNPRS
NGVRRKRRKTTSAASTGGAGDAAANVSHSGKGDAPEAAAEAGAAAASAAA
AVAAREQDPRTPRKRVSTGAGGNRTVCQNCKRPRSGGQKSSGVFCGSCGG
WWHNSAHCAGANGCPESGKWVGGWRCRGCLSTWEKGLKDRAAKVVEAWAV
HEARREQDSVGHRRAAAAAAAESEDAQRYGFAVNKIEVPPVTHPPAGILP
FLDVESVKDRGFRLARLTREDCCFMGPDCVVAKVDLCWKHRIFAIIEGAF
DPQIQPLMDFLGDRKGLPCKISGKAASGEASSTMGDYRSKLADHHLKDKP
QKESPGTFFLDTASGQVEVLNWLPTDPLMGGLMPEAERGGLLHHLMGERC
KFGPFTFGGGRNFPFLESADACAGGNPHAAKKSQRQYMQGKRRDRIGGST
THMDGMGSFTAIGGIKAGMKSVTAFESEDCGTALAVAKFKAFAKPGGSSY
VVNDRIDDDDTLRNRLTNAGVRYRTFPIREGEAYLVPSGCLHEFMNVVPC
LSVAWNIMPHPANCNVAMDMAEASAREAEAELGVNTDRSISAIEHAPPES
MRERQAAWVIKTWLQRGTLLRRRWAAAGHGSGAPAIPVSARCGGRDRSSS
VEARRVAGTMAAKHTLPRDMWKRFLFLRPRKHYYEEVNPVYDGQVVRSVV
KIAVATPAARGAAAVAVGARAAAAKAANARAVGAKAAGAKAATARAAGLK
ATGKSGRSVAAAAAASDVAGRKGDGKHVTEAIRADVAGLKAPAGDPGSAP
PPVKRGRGRPRKIRPNVATKPIMAPTSPRDAPQQQQQQRQEAAGTAPLDA
EPVLPEPSVPVRDGEKPTTATLRTSPREAPQQHQHEHQQHQRQEVAGTAP
LDAMPFPPERSVPVHDLVKSTTATLWSSPREVPQRQERRMTWAAPPNAAP
VPLEPTVAAHEVAATRSSWGTAAATLEWPEFSVPPLSSVSSAMLGRRLRL
PVRAEVTTPSSLAPNQGIPYVSTASLSILGDPPPDLAVQLPPSDSDADNG
GDHDGIDV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR019787Znf_PHD-finger
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD