prot_P-littoralis_Contig70.7.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig70.7.1
Unique Nameprot_P-littoralis_Contig70.7.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length347
Homology
BLAST of mRNA_P-littoralis_Contig70.7.1 vs. uniprot
Match: A0A6H5L5Q2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Q2_9PHAE)

HSP 1 Score: 557 bits (1435), Expect = 2.880e-198
Identity = 274/346 (79.19%), Postives = 307/346 (88.73%), Query Frame = 0
Query:    1 MRSLGFEQCAADACVMRLVEDGAVSMVVVVHVD-IFSIGRKTRCDQFGRDLNKYVPISNLGELRLYAGCRFSRDFSAGTIKISQQTVAENIVAKFGVTGNKETPMVVGLHLDEFDQAEPDVTEPFRSLVGHLMWLANQTRPGILNAVRAVARYTHAPKLVHWNAALHVLMYIRFTSSFGITFQRGTTGGVGFEVFVDSDYVSRATDRRSVSGGVVMCAGACVSFFSRTQNSVTLSSTEAEYVALAEGFKEAIFLRYIWSFIFPDRDVGCTTIHEDNVVGAIHLANNPATTPNSKHIDTRHHFLRERVATGEFRVVHVQSELQHADFLTNPLHKTAFRLHRDFVTNI 345
            M+ LGFEQCAADACVMRL+E+G V+MVVVVHVD IFSIG+K+RC+QFGRDLN+YVPI+NLGELRLYAG RFSRDF+ GTI +SQQT A N+VAKFGVT NKETPM VG+ L+EFD  EPDV EPFRSLVGHLMWLANQTRP ILNAVRAVARY++APK VHW AALH++MYIR TS++GITFQRGT GGV  EV+VDSDY S+ATDRRSVSGGVVMCAG+CVSFFSRTQ SVTLSSTEAEY A+A+G KEAIFLRY+WSFIFPD DVGCT I EDNV GA+HLANNPATTPNSKHID RHHF+RERV  GEF+VV+V S LQHADFLT PL K AF +HR+FV N+
Sbjct:    1 MKCLGFEQCAADACVMRLIEEGVVAMVVVVHVDDIFSIGKKSRCEQFGRDLNEYVPITNLGELRLYAGIRFSRDFAQGTITLSQQTYATNMVAKFGVTRNKETPMAVGVKLEEFDACEPDVEEPFRSLVGHLMWLANQTRPDILNAVRAVARYSYAPKSVHWKAALHIVMYIRCTSAYGITFQRGTAGGVSLEVYVDSDYASKATDRRSVSGGVVMCAGSCVSFFSRTQKSVTLSSTEAEYAAMADGMKEAIFLRYLWSFIFPDGDVGCTVIKEDNV-GALHLANNPATTPNSKHIDVRHHFIRERVDRGEFKVVYVPSHLQHADFLTKPLPKEAFSVHRNFVMNL 345          
BLAST of mRNA_P-littoralis_Contig70.7.1 vs. uniprot
Match: A0A6H5JWG1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWG1_9PHAE)

HSP 1 Score: 536 bits (1381), Expect = 1.600e-186
Identity = 267/347 (76.95%), Postives = 298/347 (85.88%), Query Frame = 0
Query:    1 MRSLGFEQCAADACVMRLVEDGAVSMVVVVHVD-IFSIGRKTRCDQFGRDLNKYVPISNLGELRLYAGCRFSRDFSAGTIKISQQTVAENIVAKFGVTGNKETPMVVGLHLDEFDQAEPDVTEPFRSLVGHLMWLANQTRPGILNAVRAVARYTHAPKLVHWNAALHVLMYIRFTSSFGITFQRGTTGGVGFEVFVDSDYVSRATDRRSVSGGVVMCAGACVSFFSRTQNSVTLSSTEAEYVALAEGFKEAIFLRYIWSFIFPDRDVGCTTIHEDNVVGAIHLANNPATTPNSKHIDTRHHFLRERVATGEFRVVHVQSELQHADFLTNPLHKTAFRLHRDFVTNIR 346
            M+SLGFE CAADACVMRL+E G V+MVVV+HVD IFSIG K+RCDQFG DLN+YVPISNLGELR YAGCRFSRD   GT+ ISQQ VAE IVAKFGVT +KETPMVVGL L+++D  EPDV EPFRSLVGHLMWLANQTRP ILNAVRAVARY+HAPK +HW AALHVLMY+RFTS +GITFQRGT GG   E+FVDSD+ ++ATDRRSVSG +VM AGACV +  RTQ SVTLSSTEAEYVA+++G KEAIFLRY+W FIFP RDVGCT + EDNV GAIHLA+NPATTPNSKHID RHHF+RERVA GEF+VVHV+S+LQ ADFLT PL K  F  HRDFV NIR
Sbjct:  231 MKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQFGVDLNRYVPISNLGELRWYAGCRFSRDTVLGTVTISQQAVAEKIVAKFGVTTDKETPMVVGLKLEQYDADEPDVDEPFRSLVGHLMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMYVRFTSGYGITFQRGTVGGDHMELFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNV-GAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 576          
BLAST of mRNA_P-littoralis_Contig70.7.1 vs. uniprot
Match: A0A6H5JCD8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCD8_9PHAE)

HSP 1 Score: 549 bits (1414), Expect = 1.490e-184
Identity = 271/346 (78.32%), Postives = 304/346 (87.86%), Query Frame = 0
Query:    1 MRSLGFEQCAADACVMRLVEDGAVSMVVVVHVD-IFSIGRKTRCDQFGRDLNKYVPISNLGELRLYAGCRFSRDFSAGTIKISQQTVAENIVAKFGVTGNKETPMVVGLHLDEFDQAEPDVTEPFRSLVGHLMWLANQTRPGILNAVRAVARYTHAPKLVHWNAALHVLMYIRFTSSFGITFQRGTTGGVGFEVFVDSDYVSRATDRRSVSGGVVMCAGACVSFFSRTQNSVTLSSTEAEYVALAEGFKEAIFLRYIWSFIFPDRDVGCTTIHEDNVVGAIHLANNPATTPNSKHIDTRHHFLRERVATGEFRVVHVQSELQHADFLTNPLHKTAFRLHRDFVTNI 345
            M+ LGFEQCAADACVMRL+E+G V+MVVVVHVD IFSIG+K+RC+QFGRDLN+YVPI+NLGELRLYAG RFSRDF+ GTI +SQQT A N+VAKFGVT NKETPM VG+ L+EFD  EPDV EPFRSLVGHLMWLANQTRP ILNAVRAVARY++APK VHW AALH++MYIR T ++GIT QRGT GGV  EV+VDSDY S+ATDRRSVSGGVVMCAG+CVSFFSRTQ SVTLSSTEAEY A+A+G KEAIFLRY+WSFI PD DVGCT I EDNV GA+HLANNPATTPNSKHID RHHF+RERV  GEF+VV+V S LQHADFLT PL K AF +HR+FV N+
Sbjct:  769 MKCLGFEQCAADACVMRLIEEGVVAMVVVVHVDDIFSIGKKSRCEQFGRDLNEYVPITNLGELRLYAGIRFSRDFAQGTITLSQQTYATNMVAKFGVTRNKETPMAVGVKLEEFDACEPDVEEPFRSLVGHLMWLANQTRPDILNAVRAVARYSYAPKSVHWKAALHMVMYIRCTRAYGITLQRGTAGGVSLEVYVDSDYASKATDRRSVSGGVVMCAGSCVSFFSRTQKSVTLSSTEAEYAAMADGMKEAIFLRYLWSFISPDGDVGCTVIKEDNV-GALHLANNPATTPNSKHIDVRHHFIRERVDRGEFKVVYVPSHLQHADFLTKPLPKEAFSVHRNFVMNL 1113          
BLAST of mRNA_P-littoralis_Contig70.7.1 vs. uniprot
Match: A0A6H5KGK7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGK7_9PHAE)

HSP 1 Score: 536 bits (1381), Expect = 2.080e-183
Identity = 267/347 (76.95%), Postives = 298/347 (85.88%), Query Frame = 0
Query:    1 MRSLGFEQCAADACVMRLVEDGAVSMVVVVHVD-IFSIGRKTRCDQFGRDLNKYVPISNLGELRLYAGCRFSRDFSAGTIKISQQTVAENIVAKFGVTGNKETPMVVGLHLDEFDQAEPDVTEPFRSLVGHLMWLANQTRPGILNAVRAVARYTHAPKLVHWNAALHVLMYIRFTSSFGITFQRGTTGGVGFEVFVDSDYVSRATDRRSVSGGVVMCAGACVSFFSRTQNSVTLSSTEAEYVALAEGFKEAIFLRYIWSFIFPDRDVGCTTIHEDNVVGAIHLANNPATTPNSKHIDTRHHFLRERVATGEFRVVHVQSELQHADFLTNPLHKTAFRLHRDFVTNIR 346
            M+SLGFE CAADACVMRL+E G V+MVVV+HVD IFSIG K+RCDQFG DLN+YVPISNLGELR YAGCRFSRD   GT+ ISQQ VAE IVAKFGVT +KETPMVVGL L+++D  EPDV EPFRSLVGHLMWLANQTRP ILNAVRAVARY+HAPK +HW AALHVLMY+RFTS +GITFQRGT GG   E+FVDSD+ ++ATDRRSVSG +VM AGACV +  RTQ SVTLSSTEAEYVA+++G KEAIFLRY+W FIFP RDVGCT + EDNV GAIHLA+NPATTPNSKHID RHHF+RERVA GEF+VVHV+S+LQ ADFLT PL K  F  HRDFV NIR
Sbjct:  455 MKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQFGVDLNRYVPISNLGELRWYAGCRFSRDTVLGTVTISQQAVAEKIVAKFGVTTDKETPMVVGLKLEQYDADEPDVDEPFRSLVGHLMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMYVRFTSGYGITFQRGTVGGDHMELFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNV-GAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 800          
BLAST of mRNA_P-littoralis_Contig70.7.1 vs. uniprot
Match: A0A6H5K5L3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5L3_9PHAE)

HSP 1 Score: 514 bits (1325), Expect = 3.240e-178
Identity = 260/347 (74.93%), Postives = 289/347 (83.29%), Query Frame = 0
Query:    1 MRSLGFEQCAADACVMRLVEDGAVSMVVVVHVD-IFSIGRKTRCDQFGRDLNKYVPISNLGELRLYAGCRFSRDFSAGTIKISQQTVAENIVAKFGVTGNKETPMVVGLHLDEFDQAEPDVTEPFRSLVGHLMWLANQTRPGILNAVRAVARYTHAPKLVHWNAALHVLMYIRFTSSFGITFQRGTTGGVGFEVFVDSDYVSRATDRRSVSGGVVMCAGACVSFFSRTQNSVTLSSTEAEYVALAEGFKEAIFLRYIWSFIFPDRDVGCTTIHEDNVVGAIHLANNPATTPNSKHIDTRHHFLRERVATGEFRVVHVQSELQHADFLTNPLHKTAFRLHRDFVTNIR 346
            M+SLGFE CAADACVMRL+E G V+MVVV+HVD IFSIG K+RCDQFG DLN+YVPISNLGELR YAGCRFSRD   GT+ ISQQ VAE IVAKF VT  KETPMVV L L+++D  EPDV EPFRSLVGHLMWLANQTRP ILNAVRAVARY+HAPK +HW AALHVLMY+RFTS  GITFQRGT GG   E+ VDSD+ ++ATDRRSVSG +VM AGACV +  RTQ SVTLSSTEAEYVA+++G  EAIFLRY+W  IF   DVGCT + EDNV GAIHLA+NPATTPNSKHID RHHF+RERVA GEF+VVHV+S+LQ ADFLT PL K  F  HRDFV NIR
Sbjct:  218 MKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQFGVDLNRYVPISNLGELRWYAGCRFSRDTVLGTVTISQQAVAEKIVAKFDVTTEKETPMVVRLKLEQYDADEPDVDEPFRSLVGHLMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMYVRFTSGCGITFQRGTVGGDHMELLVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMTEAIFLRYLWKIIFSVLDVGCTPVWEDNV-GAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 563          
BLAST of mRNA_P-littoralis_Contig70.7.1 vs. uniprot
Match: A0A6H5KAC2_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAC2_9PHAE)

HSP 1 Score: 536 bits (1381), Expect = 3.010e-173
Identity = 267/347 (76.95%), Postives = 298/347 (85.88%), Query Frame = 0
Query:    1 MRSLGFEQCAADACVMRLVEDGAVSMVVVVHVD-IFSIGRKTRCDQFGRDLNKYVPISNLGELRLYAGCRFSRDFSAGTIKISQQTVAENIVAKFGVTGNKETPMVVGLHLDEFDQAEPDVTEPFRSLVGHLMWLANQTRPGILNAVRAVARYTHAPKLVHWNAALHVLMYIRFTSSFGITFQRGTTGGVGFEVFVDSDYVSRATDRRSVSGGVVMCAGACVSFFSRTQNSVTLSSTEAEYVALAEGFKEAIFLRYIWSFIFPDRDVGCTTIHEDNVVGAIHLANNPATTPNSKHIDTRHHFLRERVATGEFRVVHVQSELQHADFLTNPLHKTAFRLHRDFVTNIR 346
            M+SLGFE CAADACVMRL+E G V+MVVV+HVD IFSIG K+RCDQFG DLN+YVPISNLGELR YAGCRFSRD   GT+ ISQQ VAE IVAKFGVT +KETPMVVGL L+++D  EPDV EPFRSLVGHLMWLANQTRP ILNAVRAVARY+HAPK +HW AALHVLMY+RFTS +GITFQRGT GG   E+FVDSD+ ++ATDRRSVSG +VM AGACV +  RTQ SVTLSSTEAEYVA+++G KEAIFLRY+W FIFP RDVGCT + EDNV GAIHLA+NPATTPNSKHID RHHF+RERVA GEF+VVHV+S+LQ ADFLT PL K  F  HRDFV NIR
Sbjct: 1531 MKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQFGVDLNRYVPISNLGELRWYAGCRFSRDTVLGTVTISQQAVAEKIVAKFGVTTDKETPMVVGLKLEQYDADEPDVDEPFRSLVGHLMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMYVRFTSGYGITFQRGTVGGDHMELFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNV-GAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 1876          
BLAST of mRNA_P-littoralis_Contig70.7.1 vs. uniprot
Match: A0A6H5JMP2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP2_9PHAE)

HSP 1 Score: 501 bits (1289), Expect = 5.420e-166
Identity = 263/370 (71.08%), Postives = 292/370 (78.92%), Query Frame = 0
Query:    1 MRSLGFEQCAADACVMRLVEDGAVSMVVVVHVD-IFSIGRKTRCDQFGRDLNKYVPISNLGELRLYAGCRFSRDFSAGTIKISQQTVAENIVAKFGVTGNKETPMVVGLHLDE--FDQA-EPD--------------------VTEPFRSLVGHLMWLANQTRPGILNAVRAVARYTHAPKLVHWNAALHVLMYIRFTSSFGITFQRGTTGGVGFEVFVDSDYVSRATDRRSVSGGVVMCAGACVSFFSRTQNSVTLSSTEAEYVALAEGFKEAIFLRYIWSFIFPDRDVGCTTIHEDNVVGAIHLANNPATTPNSKHIDTRHHFLRERVATGEFRVVHVQSELQHADFLTNPLHKTAFRLHRDFVTNIR 346
            M+SLGFE CAADACVMRL+E G V+MVVV+HVD IFSIG K+RCDQFG DLN+YVPISNLGELR YAGCRF RD   GT+ ISQQ VAE IVAKFGVT +KETPMVVGL L+    D A E D                    V EPFRSLVGHLMWLANQTRP ILNAVRAVARY+HAPK +HW AALHVLMY+RFTS +GITFQRGT GG   E+FVDSD+ ++ATDRRSVSG +VM AGACV +  RTQ S TLSSTEAEYVA+++G KEAIFLRY+W FIFP RDVGCT + EDNV GAIHLA+NPATTPNSK ID RHHF+RERVA G F+VVHV+S+LQ ADFLT PL K  F  HRDFV NIR
Sbjct:  736 MKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQFGVDLNRYVPISNLGELRWYAGCRFFRDTVLGTVTISQQAVAEKIVAKFGVTTDKETPMVVGLKLEHGTLDVAGESDSXXXXXXXXXXXXXXXXXXXVDEPFRSLVGHLMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMYVRFTSGYGITFQRGTVGGDHMELFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSGTLSSTEAEYVAMSDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNV-GAIHLASNPATTPNSKQIDIRHHFIRERVARGGFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 1104          
BLAST of mRNA_P-littoralis_Contig70.7.1 vs. uniprot
Match: A0A6H5JE07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE07_9PHAE)

HSP 1 Score: 463 bits (1192), Expect = 3.110e-151
Identity = 240/355 (67.61%), Postives = 271/355 (76.34%), Query Frame = 0
Query:    1 MRSLGFEQCAADACVMRLVEDGAVSMVVVVHVD-IFSIGRKTRCDQFGRDLNKYVPISNLGELRLYAGCRFSRDFSAGTIKISQQTVAENIVAKFGVTGNKETPMVVGLHLDEFDQAEPDVTEPFRSLVGHLM----------------------------------------WLANQTRPGILNAVRAVARYTHAPKLVHWNAALHVLMYIRFTSSFGITFQRGTTGGVGFEVFVDSDYVSRATDRRSVSGGVVMCAGACVSFFSRTQNSVTLSSTEAEYVALAEGFKEAIFLRYIWSFIFPDRDVGCTTIHEDNVVGAIHLANNPATTPNSKHIDTRHHFLRERVATGEFRVV 314
            M+SLGFE CAADACVMRL+E G V+MVVV+HVD IFSIG K+RCDQFG DLN+YVPISNLGELR YAGCRFSRD   GT+ ISQQ VAE IVAKFGVT +KETPMVV L L+++D  EPDV +PFRSLVGHLM                                        WLANQTRP ILNAVRAVARY+HAPK +HW AALHVLMY+RFTS +GITFQRGT GG  +E+FVDSD+ ++ATDRRSVSG +VM AGACV +  RTQ SVTLSSTEAEYVA+++G KEA FL Y+W  IFP RDVGCT + EDNV GAIHLA+NPATTPNSKHID RHHF+RERVA GEF+VV
Sbjct:  704 MKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQFGVDLNRYVPISNLGELRWYAGCRFSRDTVLGTVTISQQAVAEKIVAKFGVTTDKETPMVVRLKLEQYDAGEPDVDKPFRSLVGHLMRLGGCLGCWEEYTVYGASGGARLXXXXXXXXXXXXXXXXXWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMYVRFTSGYGITFQRGTVGGDHWELFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEATFLWYLWKIIFPGRDVGCTPVWEDNV-GAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVV 1057          
BLAST of mRNA_P-littoralis_Contig70.7.1 vs. uniprot
Match: A0A6H5JHE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHE6_9PHAE)

HSP 1 Score: 428 bits (1100), Expect = 5.390e-148
Identity = 220/301 (73.09%), Postives = 244/301 (81.06%), Query Frame = 0
Query:   26 MVVVVHVD-IFSIGRKTRCDQFGRDLNKYVPISNLGELRLYAGCRFSRDFSAGTIKISQQTVAENIVAKFGVTGNKETPMVVGLHLDEFDQAEPDVTEPFRSLVGHLMWLANQTRPGILNAVRAVARYTHAPKLVHWNAALHVLMYIRFTSSFGITFQRGTTGGVGFEVFVDSDYVSRATDRRSVSGGVVMCAGACVSFFSRTQNSVTLSSTEAE-------------YVALAEGFKEAIFLRYIWSFIFPDRDVGCTTIHEDNVVGAIHLANNPATTPNSKHIDTRHHFLRERVATGEFR 312
            MVVV+HVD IFSIG K+ CDQFG DLN+YVPISNLGELR YAGCRFSRD   GT+ ISQQ VAE IVAKFGVT +KETPMVVGL L+++D  EPDV EPFRSLVGHLMWLANQTRP ILNAVRAVARY+HAPK +HW AALHVLMY+RFT   GITFQRGT GG   E+FVDSD+ ++ATDRRSVSG +VM AGACV +  RTQ SVTLSSTEAE             YVA+++G KEAIFLRY+W FIFP RDVGCT + EDNV GAIHLA+NPATTPNSKHID RHHF+ ERVA G  R
Sbjct:    1 MVVVIHVDDIFSIGLKSGCDQFGVDLNRYVPISNLGELRWYAGCRFSRDTVLGTVTISQQAVAEKIVAKFGVTTDKETPMVVGLKLEQYDADEPDVDEPFRSLVGHLMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMYVRFTRGNGITFQRGTEGGDHMELFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEXXXXXXXXXXXXEYVAMSDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNV-GAIHLASNPATTPNSKHIDIRHHFIHERVARGGSR 300          
BLAST of mRNA_P-littoralis_Contig70.7.1 vs. uniprot
Match: A0A6H5KAQ1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAQ1_9PHAE)

HSP 1 Score: 436 bits (1122), Expect = 2.640e-142
Identity = 226/346 (65.32%), Postives = 259/346 (74.86%), Query Frame = 0
Query:    1 MRSLGFEQCAADACVMRLVEDGAVSMVVVVHVD-IFSIGRKTRCDQFGRDLNKYVPISNLGELRLYAGCRFSRDFSAGTIKISQQTVAENIVAKFGVTGNKETPMVVGLHLDEFDQAEPDVTEPFRSLVGHLMWLANQTRPGILNAVRAVARYTHAPKLVHWNAALHVLMYIRFTSSFGITFQRGTTGGVGFEVFVDSDYVSRATDRRSVSGGVVMCAGACVSFFSRTQNSVTLSSTEAEYVALAEGFKEAIFLRYIWSFIFPDRDVGCTTIHEDNVVGAIHLANNPATTPNSKHIDTRHHFLRERVATGEFRVVHVQSELQHADFLTNPLHKTAFRLHRDFVTNI 345
            M+SLGFE CAADACVMRL+E G V+MVVV+HVD IFSIG K+RCDQ                                        VAE IVAKFGVT +KETPMVVGL L+++D  EPDV EPFR LVGHLMWLANQTRP ILNAVRAVARY+HAPK +HW AALHVLM++RFTS +GITFQRGT GG   E+FVDSD+ ++ATDRRSVSG +VM AGACV +  RTQ SVTLSSTEAEYVA+++G KEAIFLR++W F+FP RDVGCT + EDNV GA HLA+  A+TPNSKHID RHHF+RERVA GEF+VVH +S+LQ ADFLT PL K  F  HRDFV NI
Sbjct:  686 MKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQ---------------------------------------AVAEKIVAKFGVTTDKETPMVVGLKLEQYDADEPDVDEPFRLLVGHLMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMFVRFTSGYGITFQRGTVGGDHMELFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEAIFLRHLWKFVFPGRDVGCTPVWEDNV-GAFHLASKSASTPNSKHIDIRHHFIRERVARGEFKVVHARSDLQRADFLTKPLPKETFCAHRDFVMNI 991          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig70.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5Q2_9PHAE2.880e-19879.19Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JWG1_9PHAE1.600e-18676.95Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JCD8_9PHAE1.490e-18478.32Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KGK7_9PHAE2.080e-18376.95Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K5L3_9PHAE3.240e-17874.93Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KAC2_9PHAE3.010e-17376.95Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JMP2_9PHAE5.420e-16671.08Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JE07_9PHAE3.110e-15167.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHE6_9PHAE5.390e-14873.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAQ1_9PHAE2.640e-14265.32Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 192..332
e-value: 6.48058E-53
score: 169.186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig70contigP-littoralis_Contig70:21449..22489 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig70.7.1mRNA_P-littoralis_Contig70.7.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig70 18686..25256 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig70.7.1 ID=prot_P-littoralis_Contig70.7.1|Name=mRNA_P-littoralis_Contig70.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=347bp
MRSLGFEQCAADACVMRLVEDGAVSMVVVVHVDIFSIGRKTRCDQFGRDL
NKYVPISNLGELRLYAGCRFSRDFSAGTIKISQQTVAENIVAKFGVTGNK
ETPMVVGLHLDEFDQAEPDVTEPFRSLVGHLMWLANQTRPGILNAVRAVA
RYTHAPKLVHWNAALHVLMYIRFTSSFGITFQRGTTGGVGFEVFVDSDYV
SRATDRRSVSGGVVMCAGACVSFFSRTQNSVTLSSTEAEYVALAEGFKEA
IFLRYIWSFIFPDRDVGCTTIHEDNVVGAIHLANNPATTPNSKHIDTRHH
FLRERVATGEFRVVHVQSELQHADFLTNPLHKTAFRLHRDFVTNIR*
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