prot_P-littoralis_Contig70.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig70.1.1
Unique Nameprot_P-littoralis_Contig70.1.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length205
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig70.1.1 vs. uniprot
Match: A0A6H5JW31_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW31_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 7.160e-9
Identity = 31/61 (50.82%), Postives = 42/61 (68.85%), Query Frame = 0 
Query:    6 DFLVRMTSVLLVKDLSFNLFSLHWGQRNGTIVLDEEGTHLFDGQLTFPYNKTGSYLHATRV 66
            DF V+++ V +V  ++FNLFSLH  QR   I LD+ G HLF+GQL+F Y+  G  L ATR+
Sbjct:   44 DFCVQISDVYVVPGITFNLFSLHHTQRRQRITLDDNGVHLFNGQLSFAYSDVGCSLWATRL 104
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig70.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JW31_9PHAE7.160e-950.82Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig70contigP-littoralis_Contig70:14679..15293 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig70.1.1mRNA_P-littoralis_Contig70.1.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig70 1791..15550 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig70.1.1 ID=prot_P-littoralis_Contig70.1.1|Name=mRNA_P-littoralis_Contig70.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=205bp
MHARTDFLVRMTSVLLVKDLSFNLFSLHWGQRNGTIVLDEEGTHLFDGQL
TFPYNKTGSYLHATRVLHQPSAFAAATDLQAAPGFPSSGFPPPDNSDFSE
SGVEQSTGCGVVPPVSGIPSADNGVVPCHSAILPVKVLNAETSAVCHTKD
IVWTVPQVRPLAAIPPAAGGGNGVVSDLFLGPFDFAERRNHFPERWREFC
SVLI*
back to top