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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 473 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 321 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789492.9734898-UTR-P-littoralis_Contig118:493196..493288 | 1680789492.9734898-UTR-P-littoralis_Contig118:493196..493288 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig118 493197..493288 + |
| 1680789493.018222-UTR-P-littoralis_Contig118:495612..495672 | 1680789493.018222-UTR-P-littoralis_Contig118:495612..495672 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig118 495613..495672 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789492.9874074-CDS-P-littoralis_Contig118:493288..493387 | 1680789492.9874074-CDS-P-littoralis_Contig118:493288..493387 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig118 493289..493387 + |
| 1680789492.9962695-CDS-P-littoralis_Contig118:493398..493570 | 1680789492.9962695-CDS-P-littoralis_Contig118:493398..493570 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig118 493399..493570 + |
| 1680789493.0045803-CDS-P-littoralis_Contig118:495562..495612 | 1680789493.0045803-CDS-P-littoralis_Contig118:495562..495612 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig118 495563..495612 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig118.122.1 >prot_P-littoralis_Contig118.122.1 ID=prot_P-littoralis_Contig118.122.1|Name=mRNA_P-littoralis_Contig118.122.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=107bp
MGNTAAASEKQRHTHPVHTRWGTDCCSFNRQTALSFRARCLSADPASQAE
PSGADMPLRYSYDTTTRLTQCQSFVAAALLRRYRWKITPEGNSQDWDGSE
VGMPFF* back to topmRNA from alignment at P-littoralis_Contig118:493197..495672+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig118.122.1 ID=mRNA_P-littoralis_Contig118.122.1|Name=mRNA_P-littoralis_Contig118.122.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2476bp|location=Sequence derived from alignment at P-littoralis_Contig118:493197..495672+ (Pylaiella littoralis U1_48)
TTTAGATCTTCGGCTCCCCATCATGTTCCTTCACGCGCAAGCAGCCGTTG
GTGCAAAAAGCATTTATCCTTGAATCAGGTTCCTCCATTGGCATGGGAAA
CACGGCAGCAGCGAGTGAGAAACAACGGCACACTCATCCAGTCCACACCA
GATGGGGCACCGACTGCTGCTCATTCAACCGACAGACTGCTCAAAATTTC
AATTGAGTTTTCGAGCGCGCTGTCTGTCGGCGGATCCAGCAAGCCAGGCG
GAGCCAAGCGGAGCCGACATGCCGCTACGGTACTCGTATGATACAACGAC
GCGATTGACACAGTGTCAGAGTTTTGTTGCGGCAGCACTCCTCCGCCGGT
ATCGCTGGAAAATCACACCCGAAGGTATGGTAGTTAGAAGAGAGAATGAC
CGTCAGAGAGCGGTCAGAGAGAGAGATGCACACAGTTTCGGAGAGATTCG
TTGGTGCCGTGTGCCGTGCCCTCTTCTTATACTCCGGAGTACTCGAGTAT
ATGTTTGTTGTGTGAGAACACATCATGTTCTCGGTGGGGCCATTACTCTA
CATGTACAAGGTACGTATGATATACTTCGAAGTACTGTTTTATCGTAAAA
ATATGTATCATTTCACAGAAAGCACCGTACTTGGGCTCCAGTTGATCAGG
TTGACTGATCTACTTGAGTGACTACGTGACTACCGTATCCTGCCAAGAGA
GCAGAAGGTATAGTATTCCACGCGATCATCAAATATCCTGACCATCGTAT
ATACAATAACGAATCTGGTACAGAGCATCATGTGATATGATATAGCAGCA
GCGTTAGGCCGCGTAGGATTCCACTCACCCTCCCTCCTCGCTACAGGCTT
GCTATCACGGTCGAGTCGGTGCTGCTGCACCCGACAACAACGAAGAGACG
TAGGTCGTATCATACCGCTCGCTTTTGGGAAGCTGTGGACAAACATACAT
GACCCTCACGCACGCAAAGTGATCATTGGGGGAAATGGGAGAGTCTTACC
ACGTTGCACCCAATTCCCGGCCTCCACATTGTAATTCCTAATGAACGCTC
ATAGGCAGAGTTCTGATAGGATGCGAAAACGTGACGATCGGCGCCACGTT
TTCACATCCGCGTCACTCTCCACGGCGTCCTTGCGTGGCACTGTACGTGT
AATCATAACTACATATTAGGGGAATGGATGCCCCCGCCCACGAGGCGGGC
GGCCACCATGAGATGAAGGCAAGTGCTGCTGTATTGGGTCACAAAGGACG
GTTGAAAGACAATCATGCCGGGGTCGCGCATGTCCCGAGGACGGTAGCTG
TCATTCAATATTTTATAGCCACCATTTGAGTAATTCTCATGCTATGATAC
GCACGCATGTATTTCACAACAGGTCGCTTTTGACCGCATAGCCGCCTACA
ACATACTTCGAAGTACGAAGTACATGGTTGTGCTGCGGTACGAAACGACC
TGTGGCTCCCGTACACAACTAACTGCGGTGTCTTTCAGCTTTCCTGGGCC
ACCTGCAAAATTTGACACTTCACGACACTAATGTGACAACCAGTGCTGAA
AGATTTGCGTTAGGACTACCTAATCGAAAGCTGTTCAGAAACACGTCGTT
CGATATTCGGTCGCGCCCTCTTTGTTTCAAAAATCGAGCGTTAAAAGTTA
ACCTACGGGGATAAGAAAAAATTACGCGGTATGTACCACATGATGGATGT
TGAAGTGTATCGTACTGCTGTACTTCAGCAAGAAGTAGCGCCATTTCGGT
AGGTCGGTGGTAAACTTCACCTGCTTGCCTATGTCTATCACCTATCGTTG
TACTGCTGCATTGCCGCTCAAAGCACAACGTGTGAGTCTTTGTAGTTTTT
TGTCGTCTTTGCGCTCAGAATTACAGCAGCAGCAGCAGCAGCTAGCAGCC
CTGACGCCCCCTCCCCCCCCCCCGTCTCTCACTCGCATATGTGTCTGTGT
GAGTGTACTAGCATCCCTCTGACGCGATCACTCCCGCATGACGGGATGGG
GCCCTGTGTAAATGAATGTCCAGAGGCATTATTAAGACCGCTTTGTACCC
CCCCCGCGCGCCACCCATTTCTCTCTCCCCAATCTCTCGCGAAAGAGGTT
ATATTTTCGAAGGGACAAATGGGAATCCCCGCCCCCTCCCCGAGACTAAT
GGCTCTGCTTGTTCATTCGTGTGGTCAACTAACAAGGAGCACAAAACGAG
TCCCTCACGATGAGGGTGCTCACACAACCCATCAAACTCATGTCTCTATC
GACCGCAACTTCAATAGTACAGCGGCTTCTTTTCGTGCAAGAGGGGACTT
CGAGAGGAATTGAATATTTTGACAGCCAACGCCTGAAACGAGCCCTGTGT
ATTTTTTCCTTTCTAGGTAATAGCCAGGATTGGGATGGAAGTGAGGTTGG
TATGCCCTTCTTCTGATGACCAACCAGCGAGTATGTGCAATGGAGTGGCT
CCCCTAGCCTGGCCAGTCATGAAAAG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig118:493197..495672+ >mRNA_P-littoralis_Contig118.122.1 ID=mRNA_P-littoralis_Contig118.122.1|Name=mRNA_P-littoralis_Contig118.122.1|organism=Pylaiella littoralis U1_48|type=CDS|length=321bp|location=Sequence derived from alignment at P-littoralis_Contig118:493197..495672+ (Pylaiella littoralis U1_48)
ATGGGAAACACGGCAGCAGCGAGTGAGAAACAACGGCACACTCATCCAGT
CCACACCAGATGGGGCACCGACTGCTGCTCATTCAACCGACAGACTGCTT
TGAGTTTTCGAGCGCGCTGTCTGTCGGCGGATCCAGCAAGCCAGGCGGAG
CCAAGCGGAGCCGACATGCCGCTACGGTACTCGTATGATACAACGACGCG
ATTGACACAGTGTCAGAGTTTTGTTGCGGCAGCACTCCTCCGCCGGTATC
GCTGGAAAATCACACCCGAAGGTAATAGCCAGGATTGGGATGGAAGTGAG
GTTGGTATGCCCTTCTTCTGA back to top
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