prot_P-littoralis_Contig70.52.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig70.52.2
Unique Nameprot_P-littoralis_Contig70.52.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length101
Homology
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BLAST of mRNA_P-littoralis_Contig70.52.2 vs. uniprot
Match: D7FUE0_ECTSI (40S ribosomal protein S27 n=3 Tax=PX clade TaxID=569578 RepID=D7FUE0_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 2.160e-9
Identity = 27/27 (100.00%), Postives = 27/27 (100.00%), Query Frame = 0 
Query:    1 MPADLLHPTSSHEKRVHKLKRLVQSPN 27
            MPADLLHPTSSHEKRVHKLKRLVQSPN
Sbjct:    1 MPADLLHPTSSHEKRVHKLKRLVQSPN 27
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig70.52.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUE0_ECTSI2.160e-9100.0040S ribosomal protein S27 n=3 Tax=PX clade TaxID=5... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023407Ribosomal protein S27, zinc-binding domain superfamilyGENE3D2.20.25.100coord: 1..29
e-value: 9.9E-7
score: 30.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig70contigP-littoralis_Contig70:282355..283106 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig70.52.2mRNA_P-littoralis_Contig70.52.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig70 282345..283162 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig70.52.2 ID=prot_P-littoralis_Contig70.52.2|Name=mRNA_P-littoralis_Contig70.52.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=101bp
MPADLLHPTSSHEKRVHKLKRLVQSPNRPKGPTPSTEFWANPPDLPPTAS
MCRYTSSSTTSGEDAGIFHFSTRRKDRIGCAAIGSRQHGAPKCSRLDRDE
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023407Ribosomal_S27_Zn-bd_dom_sf