prot_P-littoralis_Contig7.312.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig7.312.2
Unique Nameprot_P-littoralis_Contig7.312.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length152
Homology
BLAST of mRNA_P-littoralis_Contig7.312.2 vs. uniprot
Match: A0A6H5JGN6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGN6_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 6.850e-27
Identity = 60/83 (72.29%), Postives = 67/83 (80.72%), Query Frame = 0
Query:   12 VPFFQAGMVRVKQASKADMQSARCFYLHGANNLSTPTAVVRRADTGRLCFTTNVVWINRGAPAAPAAVLGIGGRSSVPATDAP 94
            VPFFQ G++RVK+A+KAD+QSARCFYLHGANN ST TAVV RADTGRL  T NVVW+NR A  APA V GIGG SSV A  +P
Sbjct:  165 VPFFQEGVMRVKRATKADIQSARCFYLHGANNHSTSTAVVLRADTGRLALTNNVVWVNRRA-GAPAPVPGIGGGSSVTAAPSP 246          
BLAST of mRNA_P-littoralis_Contig7.312.2 vs. uniprot
Match: A0A6H5K0N9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0N9_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 9.570e-27
Identity = 60/83 (72.29%), Postives = 66/83 (79.52%), Query Frame = 0
Query:   12 VPFFQAGMVRVKQASKADMQSARCFYLHGANNLSTPTAVVRRADTGRLCFTTNVVWINRGAPAAPAAVLGIGGRSSVPATDAP 94
            VPFFQ GM+RVK+ +KAD+QSARCFYLHGANN ST TAVV RADTGRL  T NVVW+NR A  APA V GIGG SSV A  +P
Sbjct:  238 VPFFQEGMMRVKRVTKADVQSARCFYLHGANNHSTSTAVVLRADTGRLALTNNVVWVNRRA-GAPAPVPGIGGGSSVTAAPSP 319          
BLAST of mRNA_P-littoralis_Contig7.312.2 vs. uniprot
Match: A0A6H5JS38_9PHAE (Integrase catalytic domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS38_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 4.590e-26
Identity = 60/79 (75.95%), Postives = 65/79 (82.28%), Query Frame = 0
Query:   12 VPFFQAGMVRVKQASKADMQSARCFYLHGANNLSTPTAVVRRADTGRLCFTTNVVWINRGAPAAPAAVLGIGGRSSVPA 90
            VPFFQ GM+RVK+A+KAD+QSARCFYLHGANN ST TAVV RADTGRL  T NVVW+NR A  APA V GIGG SSV A
Sbjct:  331 VPFFQEGMMRVKRATKADVQSARCFYLHGANNHSTSTAVVLRADTGRLALTNNVVWVNRRA-GAPAPVPGIGGGSSVTA 408          
BLAST of mRNA_P-littoralis_Contig7.312.2 vs. uniprot
Match: A0A6H5J8J2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8J2_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 1.470e-25
Identity = 59/80 (73.75%), Postives = 65/80 (81.25%), Query Frame = 0
Query:   12 VPFFQAGMVRVKQASKADMQSARCFYLHGANNLSTPTAVVRRADTGRLCFTTNVVWINRGAPAAPAAVLGIGGRSSVPAT 91
            VPFFQ GM+RVK+A+KAD+QS RCFYLHGANN ST TAVV RADTGRL  T NVVW+NR A  APA V GIGG SS+ AT
Sbjct:  173 VPFFQEGMMRVKRATKADVQSLRCFYLHGANNHSTSTAVVLRADTGRLALTNNVVWVNRRA-GAPAPVPGIGGGSSMFAT 251          
BLAST of mRNA_P-littoralis_Contig7.312.2 vs. uniprot
Match: A0A6H5JM35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM35_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 5.250e-24
Identity = 55/75 (73.33%), Postives = 60/75 (80.00%), Query Frame = 0
Query:   10 NTVPFFQAGMVRVKQASKADMQSARCFYLHGANNLSTPTAVVRRADTGRLCFTTNVVWINRGAPAAPAAVLGIGG 84
            N VPFFQ GM+RVK+ASKAD+QS RCFYLHGANN S+ TAVV RA TGRL  T NVVW+NR A  APA V GIGG
Sbjct:  177 NVVPFFQEGMIRVKRASKADVQSVRCFYLHGANNHSSATAVVLRAVTGRLALTNNVVWVNRRA-GAPAPVPGIGG 250          
BLAST of mRNA_P-littoralis_Contig7.312.2 vs. uniprot
Match: A0A6H5JIT1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIT1_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 5.990e-24
Identity = 55/73 (75.34%), Postives = 60/73 (82.19%), Query Frame = 0
Query:   12 VPFFQAGMVRVKQASKADMQSARCFYLHGANNLSTPTAVVRRADTGRLCFTTNVVWINRGAPAAPAAVLGIGG 84
            VPFFQ GM+RVK+A+ AD+QSARCFYLHGANN ST TAVV RADTGRL  T NVVW+NR A  APA V GIGG
Sbjct:  307 VPFFQEGMMRVKRATNADVQSARCFYLHGANNHSTSTAVVLRADTGRLALTNNVVWVNRQA-GAPAPVPGIGG 378          
BLAST of mRNA_P-littoralis_Contig7.312.2 vs. uniprot
Match: A0A6H5JKF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKF2_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 6.770e-24
Identity = 55/73 (75.34%), Postives = 60/73 (82.19%), Query Frame = 0
Query:   12 VPFFQAGMVRVKQASKADMQSARCFYLHGANNLSTPTAVVRRADTGRLCFTTNVVWINRGAPAAPAAVLGIGG 84
            VPFFQ GM+RVK+A+KAD+Q ARCFYLHGANN ST TAVV RADTGRL  T NVVW+NR A  APA V GIGG
Sbjct:   77 VPFFQEGMMRVKRATKADVQPARCFYLHGANNPSTSTAVVLRADTGRLALTNNVVWVNRRA-GAPAPVPGIGG 148          
BLAST of mRNA_P-littoralis_Contig7.312.2 vs. uniprot
Match: A0A6H5JC94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC94_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 1.200e-23
Identity = 54/73 (73.97%), Postives = 61/73 (83.56%), Query Frame = 0
Query:   12 VPFFQAGMVRVKQASKADMQSARCFYLHGANNLSTPTAVVRRADTGRLCFTTNVVWINRGAPAAPAAVLGIGG 84
            VPFFQ GM+RVK+A++AD+QSARCF+LHGANN ST TAVV RADTGRL  T NVVW+NR A  APA V GIGG
Sbjct:  158 VPFFQEGMMRVKRATQADVQSARCFFLHGANNHSTSTAVVLRADTGRLALTNNVVWVNRRA-GAPAQVPGIGG 229          
BLAST of mRNA_P-littoralis_Contig7.312.2 vs. uniprot
Match: A0A6H5L4Z1_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Z1_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 1.690e-23
Identity = 55/75 (73.33%), Postives = 59/75 (78.67%), Query Frame = 0
Query:   10 NTVPFFQAGMVRVKQASKADMQSARCFYLHGANNLSTPTAVVRRADTGRLCFTTNVVWINRGAPAAPAAVLGIGG 84
            N VPFFQ GM+RVK+A KAD+QS RCFYLHGANN ST TAVV RADTGRL  T NVVW+NR A  APA V  IGG
Sbjct:  142 NVVPFFQEGMMRVKRAIKADVQSVRCFYLHGANNHSTVTAVVLRADTGRLAITNNVVWVNRRA-GAPAPVPAIGG 215          
BLAST of mRNA_P-littoralis_Contig7.312.2 vs. uniprot
Match: A0A6H5KQN5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQN5_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 1.750e-23
Identity = 56/83 (67.47%), Postives = 62/83 (74.70%), Query Frame = 0
Query:   12 VPFFQAGMVRVKQASKADMQSARCFYLHGANNLSTPTAVVRRADTGRLCFTTNVVWINRGAPAAPAAVLGIGGRSSVPATDAP 94
            VPFFQ GM+RVK+ASKAD+QS RCFYLHGA N S  TAVV RADTGR+C + NVVWINR   A PA V   GG SSV A  +P
Sbjct:  158 VPFFQEGMMRVKRASKADVQSVRCFYLHGARNHSDATAVVLRADTGRICLSNNVVWINR-RTAVPAPVPASGGGSSVTAAPSP 239          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig7.312.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JGN6_9PHAE6.850e-2772.29Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K0N9_9PHAE9.570e-2772.29Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JS38_9PHAE4.590e-2675.95Integrase catalytic domain-containing protein n=4 ... [more]
A0A6H5J8J2_9PHAE1.470e-2573.75Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JM35_9PHAE5.250e-2473.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JIT1_9PHAE5.990e-2475.34Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JKF2_9PHAE6.770e-2475.34Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JC94_9PHAE1.200e-2373.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4Z1_9PHAE1.690e-2373.33Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5KQN5_9PHAE1.750e-2367.47Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig7contigP-littoralis_Contig7:1217996..1218451 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig7.312.2mRNA_P-littoralis_Contig7.312.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig7 1213714..1218818 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig7.312.2 ID=prot_P-littoralis_Contig7.312.2|Name=mRNA_P-littoralis_Contig7.312.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=152bp
MKVARRRKRNTVPFFQAGMVRVKQASKADMQSARCFYLHGANNLSTPTAV
VRRADTGRLCFTTNVVWINRGAPAAPAAVLGIGGRSSVPATDAPPGESKC
HVRPRCNETNRSARDRDTVCPRVSAKVHRCYLHGANNHSTSTAVVLRADT
G*
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