prot_P-littoralis_Contig7.301.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig7.301.1
Unique Nameprot_P-littoralis_Contig7.301.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length624
Homology
BLAST of mRNA_P-littoralis_Contig7.301.1 vs. uniprot
Match: D7FLF8_ECTSI (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF8_ECTSI)

HSP 1 Score: 935 bits (2417), Expect = 0.000e+0
Identity = 524/616 (85.06%), Postives = 560/616 (90.91%), Query Frame = 0
Query:    1 MNFSKIGVQGFSLGSLQLTTDELIWTSAD--NSKKIKWVDVSRATWAQYAAYCHLRLFMKTDMSPLRLDGFSKAQYAEIERFLSARDVGLSKESPNPGGGNYGNIEVLDNIVSFSSGNRTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTDEPSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLDKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATIMVNMNAEDLQTKYGGNLNSEMIGPLHNLIAKIFKVLSGKPVFVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDTVEFQRYGGAQGAGVTRNFDLCVAPKKSVPGETTKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDKAMLQLGDLDDHDPYKAALDDDQGEDEESEDXADYAPXXXXXXXXXXXXXXXXXXXXXSDGGAQQKTHKRPGT-KTKNGSSXXXXXXXXXXXXXXXXXXXAKKDKDAPKGAMTAFMQFSQTKRAEVKAGNPDMKITDISKVLGEKWREMDENARTPFQLKASADKERY 613
            MNFSKIGVQG+SLG+LQLT +EL WTS D  +SKK+KW+DVS ATWAQYAAYCHLRLFMK D  P+RLDGFSKAQ+A+IE+FLS RDV LS ESPNPGGGNYG+IEVLDNIV FSSGN+TLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTDE SPAESLQMAV+ERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLL+KPDERYVAFV+SLDKPIRQGQQKYQHLVLRTTKDEATI VNM+AEDLQ KY  NLNSEMIGPLHNLIAKIFKVLS KPV+VTGKFSS +GAKAVKCALGANEG+LYPLNKSFIFIHKPTCIIGFDEI++VEFQRYGGAQGAGVTRNFDLCVAPK SV GET KPYVFSGIDRSEY+SLYSFLSTKKLRIKNIK+SGND AMLQLGDLDDHDPYKAALDDDQGEDEESE X     XXXXXXXXXXXXXXXXXXXXX    A + + KRPGT   K G +  XXXXXXXXXXXXXXXXXAKKDKDAPKGAM+AFMQFSQ  RA+VK  NP++K+T+ISKVLGEKW ++DE  + P+Q KA  DK RY
Sbjct:    1 MNFSKIGVQGYSLGNLQLTAEELNWTSDDKSSSKKVKWLDVSHATWAQYAAYCHLRLFMKRDARPVRLDGFSKAQHADIEKFLSERDVSLSNESPNPGGGNYGDIEVLDNIVRFSSGNKTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTDERSPAESLQMAVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTKDEATITVNMSAEDLQKKYDSNLNSEMIGPLHNLIAKIFKVLSNKPVYVTGKFSSTNGAKAVKCALGANEGYLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPK-SVAGETPKPYVFSGIDRSEYSSLYSFLSTKKLRIKNIKESGNDNAMLQLGDLDDHDPYKAALDDDQGEDEESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXDR--AHKTSKKRPGTGSAKKGPTQKXXXXXXXXXXXXXXXXXAKKDKDAPKGAMSAFMQFSQANRAQVKTDNPELKVTEISKVLGEKWGKLDETQKKPYQDKADEDKARY 613          
BLAST of mRNA_P-littoralis_Contig7.301.1 vs. uniprot
Match: A0A6H5L083_9PHAE (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L083_9PHAE)

HSP 1 Score: 611 bits (1575), Expect = 5.470e-213
Identity = 356/497 (71.63%), Postives = 374/497 (75.25%), Query Frame = 0
Query:  117 RTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTDEPSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLDKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATIMVNMNAEDLQTKYGGNLNSEMIGPLHNLIAK----IFKVLSGKPVFVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDTVEFQRYGGAQGAGVTRNFDLCVAPKKSVPGETTKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDKAMLQLGDLDDHDPYKAALDDDQGEDEESEDXADYAPXXXXXXXXXXXXXXXXXXXXX-----------------------SDGGAQQKTHKRPGT-KTKNGSSXXXXXXXXXXXXXXXXXXX---------------AKKDKDAPKGAMTAFMQFSQTKRAE 570
            RTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTDE SPAESLQMAV+ERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLL+KPDERYVAFV+SLDKPIRQGQQKYQHLVLRTTKDEA I VNM+AEDLQ KY  NLNSEMIGPLHNL+AK    IFKVLS KPV+VTGKFSS +GAKAVKCALGANEG+LYPLNK                             GAGVTRNFDLCVAPK SV GET KPYVFSGIDRSEY+SLYSFLSTKKLRIKNIK+ GND AMLQLGDLDDHDPYKAALDDD+GEDEESED ADYAP        XXXXXXXXXXXXX                       SD GA + + K+PGT   K G++                                   KKDKDAPKGAM+AFMQFSQ  RA+
Sbjct:    3 RTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTDERSPAESLQMAVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTKDEAAITVNMSAEDLQKKYDSNLNSEMIGPLHNLVAKVPKLIFKVLSSKPVYVTGKFSSTNGAKAVKCALGANEGYLYPLNK-----------------------------GAGVTRNFDLCVAPK-SVAGETPKPYVFSGIDRSEYSSLYSFLSTKKLRIKNIKERGNDNAMLQLGDLDDHDPYKAALDDDEGEDEESEDDADYAPDARGGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDSDDGAHKTSKKKPGTGSAKKGATQKKVGCSPEPSSLNPCFPQRASGGHSSKPTPKKRTKKDKDAPKGAMSAFMQFSQANRAQ 469          
BLAST of mRNA_P-littoralis_Contig7.301.1 vs. uniprot
Match: A0A836C825_9STRA (FACT complex subunit SSRP1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C825_9STRA)

HSP 1 Score: 429 bits (1103), Expect = 1.320e-139
Identity = 300/656 (45.73%), Postives = 377/656 (57.47%), Query Frame = 0
Query:    3 FSKIGVQGFSLGSLQLTTDELIWTSADNS--KKIKWVDVSRATWAQYAAYCHLRLFMKTDMSP-LRLDGFSKAQYAEIERFLSARDVGLSKESPNPGGGNYGNIEVLDNIVSFSSGNRTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTD--------------EPSP---AESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLDKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATIMVNMNAEDLQTKYGGNLNSEMIGPLHNLIAKIFKVLSGKPVFVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDTVEFQRYGGAQGAG-VTRNFDLCVAPKKSVPGETTKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDKAMLQLGDLDDHDPYKAALDDDQGEDEESEDXADYAPXXXXXXXXXXXXXXXXXXXXXSDGGAQQK------------------------THKRPGTKTKNGSSXXXXXXXXXXXXXXXXXXXAKKDKDAPKGAMTAFMQFSQTKRAEVKAGNPDMKITDISKVLGEKWREMDENARTPFQLKASADKERY 613
            F  IG+QG S+GS++ + + ++W S+D S  +K+ W    +ATWA +  Y HLR+FMK    P +R DGF +A +  ++  L+A  + LS++                                                                D LV +R+ LP++ ED D              +  P   AE+   AV++RANI DVKG VL E + S GTF  PRGRY++EMYS F+RMHGS+YDYKIQY DI+KLFLL+KPD+RYVAFV+SLDKP+RQGQQ+YQHLVL+ +K E T+ +NM+  +LQ KY G L   M G L NLIAKIFK LSG+ VFVTG + S +GAK VKCA+GA+EGHLYPLNKSFIFIHKPT +IGFDE+++VEFQRY G Q    V R+FDLCV   +S+ GE +K Y FSGIDRSEY SLY +  TK LRIKNIK SG DK    L +  D    +   +  + +  E E       XXXXXXXXXXXXXXXXXXXXX                                T K  G K K              XXXXXXXXX  KD +APKGA +AFM FS   R +V    P +KIT++SKVLGE+WR M    +  F+ KA+ADK RY
Sbjct:    9 FKGIGIQGHSVGSVKFSDEGVMWASSDRSSQQKVLWSKAEKATWAVFGKYAHLRMFMKDPADPPVRFDGFQRADFDRLKEALAAHSIKLSRDK---------------------------------------------------------------DCLVEMRLYLPDESEDDDGMEVDEDGEAIRKKDKKPRFTAETFHQAVMDRANIRDVKGSVLCELDSSLGTFLTPRGRYALEMYSTFLRMHGSKYDYKIQYEDINKLFLLEKPDDRYVAFVISLDKPVRQGQQRYQHLVLQASKVEETLNLNMSEAELQEKYKGALEPVMRGALCNLIAKIFKSLSGRAVFVTGNYRSAAGAKCVKCAMGASEGHLYPLNKSFIFIHKPTRVIGFDEVESVEFQRYSGTQDPSTVRRSFDLCVT-LRSISGEPSKDYTFSGIDRSEYPSLYQWCQTKNLRIKNIKSSG-DKVASALAEAMDSADVREEGEIKRVKSSEPEASGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSKPEGGKRK-----------APAXXXXXXXXXXXKDPNAPKGAKSAFMYFSMETRGDVLKDQPGLKITEVSKVLGERWRGMTAEDKKQFEDKAAADKARY 588          
BLAST of mRNA_P-littoralis_Contig7.301.1 vs. uniprot
Match: A0A7S2SJ65_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SJ65_9STRA)

HSP 1 Score: 374 bits (960), Expect = 8.020e-119
Identity = 210/461 (45.55%), Postives = 291/461 (63.12%), Query Frame = 0
Query:    9 QGFSLGSLQLTTDELIWTSADNSKKIKWVDVSRATWAQYAAYCHLRLFMKTDMSPLRLDGFSKAQYAEIERFLSAR-DVGLSKESPNPGGGNYGNIEVLDNIVSFSS----------------GNRTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDE----DTDEPSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLDKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATIMVNMNAEDLQTKYGGNLNSEMIGPLHNLIAKIFKVLSGKPVFVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDTVEFQRYGGAQGAGVTRNFDLCVAPKKSVPGETTKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDKA 448
            QG    S  LT D+ + TS   SKK     V  A W  +    HLR+  +T  +  R DGF  + + ++   ++   DV  +K   +  G ++G  E+ D  ++F                      +  + + +VSQCV+PG  + N++ELQ HESD  +   D LVAIR  +P   E    D D P+ AE     +++ A I +  G V+VEF+E++GTF  PRGRY +E+Y  F+RM G++YDYKI+Y+DI++LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ LVL+TTK+ + + VN++ ++L+ +Y G L   M G L NLIAK FK+++ K VF+ GKF +      VKCAL ANEGHLYPL KSF+FIHKP  +I FDE+D+VEFQRY G QG+  TRNFDLCV    S  G+  K Y+FSGIDRS+YTSLY+FLS KK++IKNI++S  D A
Sbjct:   30 QGIKWKSALLTDDDDVVTSRSISKK----HVIGARWTIFGRSGHLRI--QTPNTEFRFDGFPYSDFDKVRDIMNEYYDVETNKLPMSTAGNSFGLTEIEDRNLAFKQCILEDADEEGEEFEPREGDEMMSMKLAEVSQCVLPGNNR-NEIELQFHESDTVEAGTDQLVAIRFYIPPDPEMDPSDRDAPTSAEVFHQRIMKNAKIKNTAGDVIVEFDENKGTFLTPRGRYLIELYDSFLRMRGNKYDYKIKYDDIARLFLLPKPDDTHMAFVIALDKPIRQGQQRYQMLVLQTTKENSEVTVNLDEKELEEEYKGELQPVMQGALCNLIAKTFKIIAKKKVFIPGKFVNAYQQSCVKCALKANEGHLYPLEKSFVFIHKPPVLIRFDEVDSVEFQRYAGGQGS--TRNFDLCVMLASSA-GDPQKEYIFSGIDRSDYTSLYNFLSGKKIKIKNIQESKIDTA 480          
BLAST of mRNA_P-littoralis_Contig7.301.1 vs. uniprot
Match: A0A7S4HR37_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HR37_9STRA)

HSP 1 Score: 382 bits (982), Expect = 3.140e-118
Identity = 260/677 (38.40%), Postives = 381/677 (56.28%), Query Frame = 0
Query:    3 FSKIGVQGFSLGSLQLTTDELIWTSA-----DN-----SKKIKWVDVSRATWAQYAAYCHLRLFMKTD---MSPLRLDGFSKAQYAEIERFLSAR-DVGLSKESPNPGGGNYGNIEVLDNIVSFSS----------------GNRTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLP-EKDEDTDE---PSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLDKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATIMVNMNAEDLQTKYGGNLNSEMIGPLHNLIAKIFKVLSGKPVFVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDTVEFQRYGGAQGAGVTRNFDLCVAPKKSVPGETTKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDKAMLQ---------------LGDLDDHDPYKA-ALDDDQGEDEESEDXADYAPXXXXXXXXXXXXXXXXXXXXXSDGGAQQKTHKRPGTKT---KNGSSXXXXXXXXXXXXXXXXXXXAKK---DKDAPKGAMTAFMQFSQTKRAEVKAGNPDMKITDISKVLGEKWREMDENARTPFQLKASADKERYVDRAIPTYSS 623
            +  IG+ G S+G+     D L W SA     DN     S+ +    +  A W  +    H+R+  K      + LR DGF  A +  +   L    DV L+K + +  G ++G  ++ D  + F                      +   N+K++SQCV+PG  + N++E+Q HESDA +   D LVAIR  +P + D D  E    +PAE  Q  +++ ANI    G V+VE  E++GTF  PRGRY++E+Y  F+RM G++YDYKI+Y+DIS+LFLL KPDE ++AFV++LDKPIRQGQQ+YQ+LV++TTKD A + VN++ E L+ +Y G+L   M G L NL+AK FK+++ K VF+ GKF++ +    VKCAL A+EGHLYPL K FIFIHKPT ++ FD++++VEFQRY G QG+  TRNFDLCV+   S    +TK Y+FSGIDRS+YT LY+FLS KK++IKN++ +  D A                   G++++    ++   +D++  + ES    D                         D   ++K++K         K GSSXXXXXXXXXXXXXX      KK   D  APK   +A+  F    R ++K  NPD    ++S + G+ W+++    +  ++  A +D  R+  R +  YS+
Sbjct:    7 WKHIGLHGHSVGTFTADPDGLRWKSAVMGGGDNDDISSSRVLPAKTLVAAKWTVFGRSGHVRVRSKASDPVNAELRFDGFPAADFDRLRDVLKRLFDVDLTKHAMSSAGTSFGLTDIEDGNMVFRQCILEDADEEGEEFEPRDGDEMMSANLKEISQCVLPGNNR-NEIEMQFHESDAVEAGTDQLVAIRFYIPPDPDADPSELDASTPAELFQQRIMKNANIKRTTGDVIVEIPEAKGTFLTPRGRYAIELYDTFLRMRGAKYDYKIKYDDISRLFLLPKPDEVHMAFVIALDKPIRQGQQRYQNLVMQTTKDHAELTVNLDEEVLEKEYNGDLQPVMYGALSNLVAKTFKIIAKKKVFIPGKFANANQQPCVKCALRASEGHLYPLEKQFIFIHKPTVLVRFDDVESVEFQRYAGGQGS--TRNFDLCVSLINS-GDSSTKEYIFSGIDRSDYTGLYNFLSGKKIKIKNLQGNILDDAPSAPPVYNEDVIYGVPAGAGEMEESSEDESYGTNDEESVESESISGDDDDLGSGFDDSDLEEHRKAAKKSKPEDAKGKEKSNKXXXXXXXPEKEGSSXXXXXXXXXXXXXXDKVAPKKKXXXDPKAPKKGKSAYNYFLTAMRPKIKEQNPDATFGELSTLAGQAWKKVSNEEKEKYEKMAESDAARFK-REMADYSA 678          
BLAST of mRNA_P-littoralis_Contig7.301.1 vs. uniprot
Match: K0SUI2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SUI2_THAOC)

HSP 1 Score: 377 bits (969), Expect = 3.280e-117
Identity = 260/670 (38.81%), Postives = 381/670 (56.87%), Query Frame = 0
Query:    2 NFSKIGVQGFSLGSLQLTTDELIWTSA-------DNSKKIKWVDVSRATWAQYAAYCHLRLFMKTDM--------SPLRLDGFSKAQYAEIERFLSARD---VGLSKESPNPGGGNYGNIEVLDNIVSFSSGNRT----------------LFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDE----DTDEPSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLDKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATIMVNMNAEDLQTKYGGNLNSEMIGPLHNLIAKIFKVLSGKPVFVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDTVEFQRYGGAQGAGVTRNFDLCVAPKKSVPGET--TKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDKAMLQLGDLDDHDPYKAALDDDQGEDEESEDXADYAPXXXXXXXXXXXXXXXXXXXXXSDGGAQQKTHKRPGTKTKNGSSXXXXXXXXXXXXXXXXXXXAK------------------KDKDAPKGAMTAFMQFSQTKRAEVKAGNPDMKITDISKVLGEKWREMDENARTPFQLKASADKERY 613
            ++  IG+ G ++G+   T   ++W S+       +  + +    +S A W  +    HLR+  K           + +R DGF    Y  +   L  RD   V L + S +  G ++GN ++ +  + F   N                  +  L++ +VSQCV+PG  + N++E+Q  ESD  +   D LVA+R  +P   +    D D P+ AE+LQ  +++ A++    G ++ EF+E +GTF  PRGRYS+E+Y  F+R+ G++YDYKI+Y+DIS+LFLL + D+  VAFV++LDKPIRQGQQ+Y  LV++ TK+ + + +N++   L+ +YGG +   M G   NL+AK FKV++ K VF+ GKF++++    VKCAL ANEGHLYPL K FIFIHKP  +I FDEI++VEFQRY G QG+  TRNFDLCV+   S PG++  TK Y FSGID+S Y +LYSFLS KK++IKN++  G +             P     D+   +DEES+D +D+          XXXXXXXX         +    H++          XXXXXXXXXXXXXXXXXXX                    +D +APK   +A++ F+  KR+E+K  NPD    DISK+LG+ ++E+ +  + P+   A  DK RY
Sbjct:    7 SWKHIGLYGHAVGTFSATRHGIMWKSSVMGNDDIETKRVLPRESISGALWTVFGKSGHLRVLTKAPREGEQTKLPAAMRFDGFPGTDYEAMSEAL--RDLFGVTLKRHSMSSAGSSWGNTDISNKHLVFRQCNLEDADEDGQEFEPRDGDEMMSLDLGEVSQCVLPGNNR-NEIEMQFLESDTVEAGTDQLVALRFYVPPDADADPTDKDAPTSAEALQSRIMQIASVKKTSGSIIAEFDEGKGTFLTPRGRYSIELYDSFLRLRGAKYDYKIKYDDISRLFLLPRQDDMTVAFVIALDKPIRQGQQRYNMLVMQCTKEHSELNINLDEATLEKEYGGQIEQHMNGSFSNLVAKTFKVITRKKVFIPGKFANSNQQACVKCALRANEGHLYPLEKQFIFIHKPAVLIRFDEIESVEFQRYAGGQGS--TRNFDLCVS-LHSTPGDSASTKEYTFSGIDKSNYAALYSFLSGKKIKIKNLEGVGEEPKK----------PGAPRYDERMSDDEESDD-SDFDENAPKSDDSXXXXXXXXDLGSVVSDDSDLAEHRKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPSXXXXXXRDPNAPKAPKSAYVFFTSAKRSEIKEANPDAGFGDISKLLGKAYKELSDAEKEPYDEMARKDKARY 659          
BLAST of mRNA_P-littoralis_Contig7.301.1 vs. uniprot
Match: A0A6U3RIK7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RIK7_9STRA)

HSP 1 Score: 377 bits (967), Expect = 7.400e-116
Identity = 207/484 (42.77%), Postives = 298/484 (61.57%), Query Frame = 0
Query:    3 FSKIGVQGFSLGSLQLTTDELIWTSAD----------NSKKIKWVDVSRATWAQYAAYCHLRLFMKTDMSP-------LRLDGFSKAQYAEIER-FLSARDVGLSKESPNPGGGNYGNIEVLDNIVSFSS----------------GNRTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDE----DTDEPSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLDKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATIMVNMNAEDLQTKYGGNLNSEMIGPLHNLIAKIFKVLSGKPVFVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDTVEFQRYGGAQGAGVTRNFDLCVAPKKSVPGETTKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDKA 448
            +  IG+ G S+G+       + W SA            S+ I    V+ A W  +    H+R+  K            LR DGF    Y ++ + F    +V +++ S +  G ++GN ++ +  + F                      +  L + +VSQCV+PG  + N++ELQ HESD  +   D LV +R+ +P   +    D D  +PAE LQ  +++ ANI +  G V+VEF+ES+GTF  PRGRY++E+Y  F+RM G++YDYKI+Y+DISKLFLL KPD+ ++AFV++LDKPIRQGQQ+YQ LV++TTK+++ + VN++ E LQ++YGG+L   M G L NL+AK FKV++ K VF+ GKF++ +    VKCAL ANEGHLYPL K F+FIHKP  ++ FDE+++VEFQRY G QG+  TRNFDLCV    +     +K YVFSGIDRS+YT LY+FLS KK++I N +  G + A
Sbjct:   11 WKHIGLHGHSVGTFTADPAAIQWKSAMMGASDDDDIVTSRLIPPRSVASAQWTVFGRSGHIRIQQKPGGGSQSAVALELRFDGFPPTDYDKVRKSFQRLYNVDVTRHSMSSCGASFGNTDLDNRNLVFRQCILEDNDEEGMEVEPQNGDEMMSLQLAEVSQCVLPGNNR-NEIELQFHESDTVEAGTDQLVGVRIYIPPDPDMDPQDNDVQTPAEILQQRIMKMANIKNTTGSVIVEFDESRGTFLTPRGRYTIELYDSFLRMRGNKYDYKIKYDDISKLFLLPKPDDVHMAFVIALDKPIRQGQQRYQMLVMQTTKEQSEVSVNLDEETLQSEYGGDLQPMMYGALSNLVAKTFKVIAKKKVFIPGKFANANQQACVKCALRANEGHLYPLEKQFVFIHKPPVLVRFDEVESVEFQRYAGGQGS--TRNFDLCVTLLNTSGDTGSKEYVFSGIDRSDYTGLYNFLSGKKIKINNFQGVGMEDA 491          
BLAST of mRNA_P-littoralis_Contig7.301.1 vs. uniprot
Match: B8C388_THAPS (FACT complex subunit SSRP1 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C388_THAPS)

HSP 1 Score: 368 bits (944), Expect = 3.480e-114
Identity = 251/574 (43.73%), Postives = 362/574 (63.07%), Query Frame = 0
Query:   39 VSRATWAQYAAYCHLRLFMKTDM-------SPLRLDGFSKAQYAEI-ERFLSARDVGLSKESPNPGGGNYGNIEVLDNIVSFSSGNRTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDE----DTDEPSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLDKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATIMVNMNAEDLQTKYGGNLNSEMIGPLHNLIAKIFKVLSGKPVFVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDTVEFQRYGGAQGAGVTRNFDLCVAPKKSVPGET--TKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDKAMLQLGDLDDHDPYKAALDDDQGEDEESEDXADY-APXXXXXXXXXXXXXXXXXXXXXSDGGAQQKTHKRPGTKTKNGSSXXXXXXXXXXXXXXXXXXXAKK-----DKDAPKGAMTAFMQFSQTKRAEVKAGNPDMKITDISKVLGEKWR 592
            ++ A W  +    HLR+  KT         + LR DGF  + +  + E F +   + L + S +  G ++GN ++ +  +        +  L++ +VSQCV+PG  + N++E+Q  ESD  +   D LVAIR  +P   +    D D P+ AE LQ  + E A++    G ++ EF+E++GTF  PRGRYS+E+Y  F+R+ G++YDYKI+Y+DIS+LFLL K D+ ++AFV++LDKPIRQGQQ+Y  LV++ TK+++ + +N++   ++ +Y G + + M G   NL+AK FKV++ K VF+ GKF++ +    VKCAL ANEGHLYPL K FIFIHKP  +I FDEI++VEFQRY G QG+  TRNFDL V+   + PG+    K Y FSGID++ Y SLYSFLS KK+RIKNI+  G+++            P    +D+   E  ES +  DY   XXXXXXXXXXXXXXXXX    SD     +  K+   K+K+ SS XXXXXXXXXXXXXXXXX  +K     D +APK  ++AF  F+  KR ++KA NPD    +++K++G +++
Sbjct:   18 IAGALWTIFGKSGHLRVLTKTLEGSKTKLPAALRFDGFPPSDFDRLTEAFQTMYGITLKRHSMSSAGASWGNTDIANKHLFEPRDGEEMLSLDLGEVSQCVLPGNNR-NEIEMQFLESDTVEAGTDQLVAIRFYVPPDQDADPTDKDAPTSAELLQSRITEVASVKKTSGAIIAEFDENKGTFLTPRGRYSIELYDSFLRLRGAKYDYKIKYDDISRLFLLPKQDDMHMAFVIALDKPIRQGQQRYNMLVMQCTKEQSELNINLDDATIEKEYNGEIQAHMNGSFSNLVAKTFKVITKKKVFIPGKFANANQQACVKCALRANEGHLYPLEKQFIFIHKPAVLIRFDEIESVEFQRYAGGQGS--TRNFDLSVS-LINTPGDNLAVKEYTFSGIDKTNYASLYSFLSQKKIRIKNIEGIGSEEPARSA-------PMYNEMDEGGEEMGESSEDEDYDQAXXXXXXXXXXXXXXXXXLGSMSDDSDLAEHRKKAAKKSKDKSSKXXXXXXXXXXXXXXXXXEPEKKKKQKDPNAPKRGLSAFNFFTSAKRGDIKAANPDASFAELAKLVGAEFK 580          
BLAST of mRNA_P-littoralis_Contig7.301.1 vs. uniprot
Match: A0A448Z7B6_9STRA (FACT complex subunit SSRP1 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z7B6_9STRA)

HSP 1 Score: 369 bits (946), Expect = 3.540e-114
Identity = 269/679 (39.62%), Postives = 383/679 (56.41%), Query Frame = 0
Query:    3 FSKIGVQGFSLGSLQLTTDELIWTSA-----------DNSKKIKWVDVSRATWAQYAAYCHLRLFMK------TDMSPLRLDGFSKAQYAEIER-FLSARDVGLSKESPNPGGGNYGNIEVLDNIVSF---------SSGNR-------TLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDE----DTDEPSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLDKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATIMVNMNAEDLQTKYGGNLNSEMIGPLHNLIAKIFKVLSGKPVFVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDTVEFQRYGGAQGAGVTRNFDLCVAPKKSVPGE-TTKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDKAMLQLGDLDDHDPYKAALDDDQGEDEESEDXADYAPXXXXXXXXXXXXXXXXXXXXXSDGGAQ-----------QKTHKRPGTKTKNGSSXXXXXXXXXXXXXXXXXXXA---------KKDKDAPKGAMTAFMQFSQTKRAEVKAGNPDMKITDISKVLGEKWREMDENARTPFQLKASADKERYVDRAIPTYS 622
            +  IG+ G S+G+   T   + W S+            +++ +    + +A W+ +    HLRL M+           +R DGF  + Y  ++  F ++  + L K + +  G  YG  ++    + F           G          +  L++ +VSQCV+PG  + N+VELQ  ESDA +   D LV++R  +P   E    D    S AE LQ  +++ ANI    G V+VEF+  +G+F  PRGRYS+E+Y  F RM G +YDYKI+Y+DIS+LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ+LVL+T KD   + VN++ + L+ +YG +L   M G L NL+AK FK+++ K VF+ GKFS+ +    VKCAL ANEG LYPL K F+FIHKP  +I F+E+++VEFQRY G QG+  TRNFDLCV+ K + P     + YVFSG+DRS+Y  LY+FLSTKK+RIKN+++ G      Q   + + D          G D E E+X     XXXXXXXXXXXXXXXXXXXXX                 ++     G+K+K  S+XXX       XXXX               KKD + PK   TAFM FS T R   +  NPD+   D++K++G+K++E+ +      + K   DK RY +R +  Y+
Sbjct:   11 WKHIGLHGHSVGTFACTDAGIQWKSSLYGREDTGGLSASTRNVPKDSIEKAGWSVFGKSGHLRLNMEPKEGSSNTQHEMRFDGFPVSAYETMKDIFQASYGIELLKLNMSSAGTQYGRSKISGKKLVFRHCVLEDADEEGEEFEVRDGDEMMSLDLTEVSQCVLPGNNR-NEVELQFPESDAVEANNDQLVSVRFFIPPDPEVDPSDKTIKSSAELLQQRIMQMANIRKTTGDVIVEFDLEKGSFLTPRGRYSIELYERFFRMRGQKYDYKIKYDDISRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVLQTNKDPDEVRVNLDEDTLKKEYGDDLQPIMRGSLSNLVAKTFKIIAKKKVFIPGKFSNANQQPCVKCALRANEGLLYPLEKQFVFIHKPPVLIRFNEVESVEFQRYAGGQGS--TRNFDLCVSLKPNAPSAGNQQEYVFSGVDRSDYAGLYNFLSTKKIRIKNLQEIGG--VQEQAVPVYNEDEIYG------GPDHEMEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEEARGGSGSKSKRKSNXXXLIEDDLPXXXXGKKKVVETKPVSKKLKKDPNKPKQVTTAFMIFSNTNRERFRTENPDLNFGDLAKLIGKKYKELSKEELAELEKKVEKDKLRY-EREMKNYT 677          
BLAST of mRNA_P-littoralis_Contig7.301.1 vs. uniprot
Match: A0A7S0TAB4_9STRA (FACT complex subunit SSRP1 n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0TAB4_9STRA)

HSP 1 Score: 367 bits (941), Expect = 1.890e-113
Identity = 283/672 (42.11%), Postives = 391/672 (58.18%), Query Frame = 0
Query:    3 FSKIGVQGFSLGSLQLTTDELIWTSA---------DNSKKIKWVDVSRATWAQYAAYCHLRLFMKTDMSP------LRLDGFSKAQYAEIER-FLSARDVGLSKESPNPGGGNYGNIEVLDNIVSFS-----------------SGNRTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDE----DTDEPSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLDKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATIMVNMNAEDLQTKYGGNLNSEMIGPLHNLIAKIFKVLSGKPVFVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDTVEFQRYGGAQGAGVTRNFDLCVAPKKSVPGETTKP-YVFSGIDRSEYTSLYSFLSTKKLRIKNIKQ-SGNDKAMLQLGDLD------DHDPYKAALDDDQGEDEESEDXADYAPXXXXXXXXXXXXXXXXXXXXXSD-----GGAQQKTHKRPGTKTKNGSSXXXXXXXXXXXXXXXXXXX---AKKDKDAPKGAMTAFMQFSQTKRAEVKAGNPDMKITDISKVLGEKWREMDENARTPFQLKASADKERYVDRAIPTY 621
            +  IG+ G S+G+       + W SA           ++ I    + RA W  +    HLRL +            +R DGF  A +  ++  F     + +SK + +  G  YG  ++L   + F                  +G+  +  L++ +VSQCV+PG  + N+VELQ  ESDA +   D LV+IR  +P   E    D    S AE LQ  +++ ANI    G V+VEF+  +G+F  PRGRYS+E+Y  F RM G +YDYKI+Y+DIS+LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ+LVL+T KD   I VN++ + L+ +YG +L   M G L NL+AK FKV++ K VF+ GKFS+ +    VKCAL ANEG LYPL K F+FIHKP  +I F+E+++VEFQRY G QG+  TRNFDLCV+ K S    + +  YVFSG+DRS+YT LY+FLSTK +RIKN+++ +G  +    + D D      DH+  + +  +D+  DE +  X     XXXXXXXXXXXXXXXXXXXXXSD     GG                  XXXXXXXXXXXX    XXX   AKKD + PK A +AFM FS   RA VK  NPD K  +++K+L  +++ + ++       K   +K+RY +R +  Y
Sbjct:    7 WKHIGLHGHSVGTFACGEAGVQWKSALYGRDDTGSGTTRNIPKSLIERAAWTVFGKSGHLRLKVAQQEGKANLHHEMRFDGFPVAAFDNLKDVFQDTYGIEVSKHNISSAGTQYGQSKILGKKLVFQHCILEDADEEGEEFEVRTGDE-MMSLDLAEVSQCVLPGNNR-NEVELQFPESDAIEANNDQLVSIRFYIPPDPEVDPSDRTVKSSAELLQQRIMQMANIRKTTGDVIVEFDLEKGSFLTPRGRYSIELYERFFRMRGQKYDYKIKYDDISRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVLQTNKDPDEIRVNLDEDTLKKEYGDDLQPIMRGSLSNLVAKTFKVIAKKKVFIPGKFSNANQQPCVKCALRANEGLLYPLEKQFVFIHKPPVLIRFNEVESVEFQRYAGGQGS--TRNFDLCVSLKASAASVSNQQEYVFSGVDRSDYTGLYNFLSTKNIRIKNLQEIAGVQEKAAPVYDEDEIYGGPDHEMLEES--EDESYDEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLEEARGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAGSXXXXXXAKKDPNKPKRAQSAFMIFSNANRARVKEENPDAKFGEMAKLLSAEYKNLSKDELAELDKKVEKEKKRY-EREMENY 671          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig7.301.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF8_ECTSI0.000e+085.06FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sili... [more]
A0A6H5L083_9PHAE5.470e-21371.63FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sp. ... [more]
A0A836C825_9STRA1.320e-13945.73FACT complex subunit SSRP1 n=1 Tax=Tribonema minus... [more]
A0A7S2SJ65_9STRA8.020e-11945.55FACT complex subunit SSRP1 (Fragment) n=1 Tax=Euca... [more]
A0A7S4HR37_9STRA3.140e-11838.40Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
K0SUI2_THAOC3.280e-11738.81Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A6U3RIK7_9STRA7.400e-11642.77Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
B8C388_THAPS3.480e-11443.73FACT complex subunit SSRP1 n=1 Tax=Thalassiosira p... [more]
A0A448Z7B6_9STRA3.540e-11439.62FACT complex subunit SSRP1 n=1 Tax=Pseudo-nitzschi... [more]
A0A7S0TAB4_9STRA1.890e-11342.11FACT complex subunit SSRP1 n=1 Tax=Pseudo-nitzschi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000969Structure-specific recognition proteinPRINTSPR00887SSRCOGNITIONcoord: 256..272
score: 61.76
coord: 347..365
score: 55.26
coord: 211..227
score: 44.12
coord: 233..249
score: 52.21
coord: 365..382
score: 52.78
coord: 320..333
score: 39.29
IPR013719Domain of unknown function DUF1747SMARTSM01287Rtt106_2coord: 339..440
e-value: 1.6E-30
score: 117.4
IPR013719Domain of unknown function DUF1747PFAMPF08512Rtt106coord: 341..439
e-value: 1.3E-21
score: 76.8
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 552..623
e-value: 7.0E-20
score: 82.1
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 553..621
e-value: 2.9E-18
score: 66.0
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 553..622
score: 16.23366
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10High mobility group box domaincoord: 536..623
e-value: 8.7E-21
score: 76.1
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 538..614
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 1..84
e-value: 1.9E-5
score: 26.9
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 330..448
e-value: 1.0E-29
score: 104.7
NoneNo IPR availableGENE3D2.30.29.150coord: 189..329
e-value: 8.1E-45
score: 153.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 451..465
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 466..483
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 450..563
NoneNo IPR availablePANTHERPTHR45849FACT COMPLEX SUBUNIT SSRP1coord: 1..606
NoneNo IPR availablePANTHERPTHR45849:SF1FACT COMPLEX SUBUNIT SSRP1coord: 1..606
NoneNo IPR availableCDDcd01390HMGB-UBF_HMG-boxcoord: 553..613
e-value: 9.61584E-20
score: 81.5201
NoneNo IPR availableCDDcd13230PH1_SSRP1-likecoord: 194..331
e-value: 2.52604E-61
score: 198.137
NoneNo IPR availableCDDcd13231PH2_SSRP1-likecoord: 333..440
e-value: 2.88792E-39
score: 137.622
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 208..439
IPR035417FACT complex subunit POB3-like, N-terminal PH domainPFAMPF17292POB3_Ncoord: 3..82
e-value: 2.1E-10
score: 40.9
IPR038167SSRP1 domain superfamilyGENE3D2.30.29.220coord: 88..174
e-value: 2.2E-9
score: 38.9
IPR024954SSRP1 domainPFAMPF03531SSrecogcoord: 97..168
e-value: 1.6E-16
score: 60.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig7contigP-littoralis_Contig7:1188051..1204343 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig7.301.1mRNA_P-littoralis_Contig7.301.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig7 1188051..1204627 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig7.301.1 ID=prot_P-littoralis_Contig7.301.1|Name=mRNA_P-littoralis_Contig7.301.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=624bp
MNFSKIGVQGFSLGSLQLTTDELIWTSADNSKKIKWVDVSRATWAQYAAY
CHLRLFMKTDMSPLRLDGFSKAQYAEIERFLSARDVGLSKESPNPGGGNY
GNIEVLDNIVSFSSGNRTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDA
TDQTEDTLVAIRVTLPEKDEDTDEPSPAESLQMAVIERANIHDVKGKVLV
EFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLDKP
DERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATIMVNMNAEDLQTKYG
GNLNSEMIGPLHNLIAKIFKVLSGKPVFVTGKFSSNSGAKAVKCALGANE
GHLYPLNKSFIFIHKPTCIIGFDEIDTVEFQRYGGAQGAGVTRNFDLCVA
PKKSVPGETTKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDKAML
QLGDLDDHDPYKAALDDDQGEDEESEDDADYAPDAPGGSDAESSSDSDDG
NDEDSDGGAQQKTHKRPGTKTKNGSSKKQRDSGGGSSKPPPKKKRAKKDK
DAPKGAMTAFMQFSQTKRAEVKAGNPDMKITDISKVLGEKWREMDENART
PFQLKASADKERYVDRAIPTYSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000969SSrcognition
IPR013719DUF1747
IPR009071HMG_box_dom
IPR036910HMG_box_dom_sf
IPR011993PH-like_dom_sf
IPR035417POB3_N
IPR038167SSRP1_sf
IPR024954SSRP1_dom