mRNA_P-littoralis_Contig7.271.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig7.271.2
Unique NamemRNA_P-littoralis_Contig7.271.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig7.271.2 vs. uniprot
Match: A0A6H5KLN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLN8_9PHAE)

HSP 1 Score: 980 bits (2533), Expect = 0.000e+0
Identity = 509/658 (77.36%), Postives = 552/658 (83.89%), Query Frame = 1 
Query:  646 MSLSQQGESEAPGRTGRARMHRRSESEASGAFGV-PRPFGSTNFDNPGWRGGGTNKQR-----YGWKTNGGSNTSPDDDGNPKLVSLADLIRNEDKVPATFLYEHTGDTDVAMDARDIGVGGLPNQAMNGGAVGMQEALQAAEHGNSIRLSKFLQDGGSPDTLSRLHHLRWSLLHLAAGCSSMGGRLAFASHRRRPEPDCNDGYATCVSELLAAGADPNVTSSSLGYTPLMSAAFTGSKECCWLLLRAGAQLDMRAADGRTAFDFAEKARHLGGGNAGGARDSVLAVLRDPPKKIPRSPTSVIATLSERSRLEPEEEVPPVEVRWRVPPQASLAPTICGDVERFYVKVWCRGKGQEVIRTKTSTVNVPRRDFCRNQIIDRGIALRKNLCLPQSQTTSAIIHGLQAGEMYSFTVSCVAELEGALRHSPPSCMSKPLLIPESKEDHQWRLGGLLQRV-GKEIPSPGTAGEGGVAQVQVRRGTDQSPTNIEQRRGPAKNFSVSWAKDDLAPGIGLRQSEIYRVGNDVNPSPPIDFGRALSSNDKEWETIDASPPVPARRRSQSYVSSVTRADSFQQISPADQTFRSSMGGLGYSPPRTSPPLEEDTEERALFPDPAPSVSPAGRVEGEIGVGGGALTISTNRSSGGFHASESFQDEGCSVS 2598
            MSL+ QGE E  GR    R HRRSESEASGAFG  PRPF ST++D+P WRGGG NKQR     YGW+ N G+N SP DD NP+LVSLADLIR EDKVPAT LYEH GDTD  MDARDI  GGL +QAMNGGAVGMQEALQAAEHGNS+RLSKFLQDGG+PDTLSRLHHLRWSLLHLAAGCSSMGGRLAFASHRRRPEPDCNDGY TCVSELLAAGADPN+TSSSLGYTPLMSAA TGSKECCWLLLRAGA+LDMRA DGRTAFDFA+KARHLGGG++GG  DSVL VLR+PPKKIPRSPT VIATL+ERS LEPEEEVPPVEVRWRVP QASLAPT+CGDVERFY+K WCRGKG+EVIRTKTST +VPRRDFCRNQIIDRGIALRKNLCLPQSQTTSAI+HGL+AG +YSFTVSCVAE+EGALRHSPPSCMSKPLLIPESKEDHQWRLGG+LQ V GK+ PS GT GEGG A  QVRR T+QSPT+I+QRRGPAK+FSVSWAKDD+AP I  RQ   YRV +DV  SP  DFGR+L+SN  EWE   ASP VP RRRSQSY SS TRAD+F Q S AD+T R+SM    + PP TS  LEE TE R LF D  P    AGR +GE+G GG  LT STN  S GF ASE ++D GCSVS
Sbjct:    1 MSLNHQGEPEVAGRKTGNRAHRRSESEASGAFGGGPRPFSSTSYDSPRWRGGGANKQRGSGGRYGWRANDGNNASPADDENPRLVSLADLIRKEDKVPATLLYEHPGDTDAPMDARDIEAGGLTHQAMNGGAVGMQEALQAAEHGNSVRLSKFLQDGGNPDTLSRLHHLRWSLLHLAAGCSSMGGRLAFASHRRRPEPDCNDGYVTCVSELLAAGADPNITSSSLGYTPLMSAALTGSKECCWLLLRAGARLDMRADDGRTAFDFAQKARHLGGGSSGGIHDSVLDVLREPPKKIPRSPTMVIATLAERSSLEPEEEVPPVEVRWRVPSQASLAPTLCGDVERFYLKTWCRGKGKEVIRTKTSTADVPRRDFCRNQIIDRGIALRKNLCLPQSQTTSAIVHGLRAGGVYSFTVSCVAEVEGALRHSPPSCMSKPLLIPESKEDHQWRLGGMLQMVTGKDTPSSGTTGEGGAA-PQVRRVTNQSPTSIDQRRGPAKSFSVSWAKDDIAPTIDQRQPASYRVSDDVIVSPSGDFGRSLTSNASEWEPKHASPVVPLRRRSQSYASSATRADTFLQTSTADETIRASMA---FPPPSTSSHLEEGTEARPLFGDMTPH---AGRAQGEMGGGGTPLTFSTN--SSGFEASEFYEDGGCSVS 649
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BLAST of mRNA_P-littoralis_Contig7.271.2 vs. uniprot
Match: D7FV58_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV58_ECTSI)

HSP 1 Score: 619 bits (1596), Expect = 3.840e-212
Identity = 312/376 (82.98%), Postives = 333/376 (88.56%), Query Frame = 1 
Query:  646 MSLSQQGESEAPGRTGRARMHRRSESEASGAFGV-PRPFGSTNFDNPGWRGGGTNKQR-----YGWKTNGGSNTSPDDDGNPKLVSLADLIRNEDKVPATFLYEHTGDTDVAMDARDIGVGGLPNQAMNGGAVGMQEALQAAEHGNSIRLSKFLQDGGSPDTLSRLHHLRWSLLHLAAGCSSMGGRLAFASHRRRPEPDCNDGYATCVSELLAAGADPNVTSSSLGYTPLMSAAFTGSKECCWLLLRAGAQLDMRAADGRTAFDFAEKARHLGGGNAGGARDSVLAVLRDPPKKIPRSPTSVIATLSERSRLEPEEEVPPVEVRWRVPPQASLAPTICGDVERFYVKVWCRGKGQEVIRTKTSTVNVPRRDFCRNQ 1755
            MSL+QQGE E   R    R HRRSESEASGAFG  PRPF ST++D+P WRGGG NKQR     YGW+ N G+N SP DD NP+LVSLADLIR EDKVPAT LYEH GDTD  MDARDI  GGL +QAMNGGAVGMQEALQAAEHGNS+RLSKFLQDGG+PDTLSRLHHLRWSLLHLAAGCSSMGGRLAFASHRRRPEPDCNDGY TCVSELLAAGADPN+TSSSLGYTPLMSAA TGSKECCWLLLRAGA+LDMRA DGRTAFDFA+KARHLGGG++GG  DSVL VLR+PPKKIPRSPT VIA L+ERS LEPEEEVPPVEVRWRVP QASLAPT+CGDVERFY+K WCRGKG+EVIRTKTSTV+VPRRDFCRNQ
Sbjct:    1 MSLNQQGEPEVADRKTGNRAHRRSESEASGAFGGGPRPFTSTSYDSPRWRGGGANKQRGSGGRYGWRANDGNNVSPADDENPRLVSLADLIRKEDKVPATLLYEHPGDTDAPMDARDIEAGGLTHQAMNGGAVGMQEALQAAEHGNSVRLSKFLQDGGNPDTLSRLHHLRWSLLHLAAGCSSMGGRLAFASHRRRPEPDCNDGYVTCVSELLAAGADPNITSSSLGYTPLMSAALTGSKECCWLLLRAGARLDMRADDGRTAFDFAQKARHLGGGSSGGTHDSVLDVLREPPKKIPRSPTLVIAALAERSSLEPEEEVPPVEVRWRVPSQASLAPTLCGDVERFYLKTWCRGKGKEVIRTKTSTVDVPRRDFCRNQ 376
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BLAST of mRNA_P-littoralis_Contig7.271.2 vs. uniprot
Match: A0A835YST7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YST7_9STRA)

HSP 1 Score: 336 bits (862), Expect = 1.880e-97
Identity = 208/513 (40.55%), Postives = 260/513 (50.68%), Query Frame = 1 
Query:  865 GNPKLVSLADLIRNEDKV------PATFLYEHTGDTDVAMDARDIGVGGLPNQAMNGGAVGMQEALQAAEHGNSIRLSKFLQDGGSPDTLSRLHHLRWSLLHLAAG------------------------CSSMGGRLAFA--SHRRRPEPDCNDGYATCVSELLAAGADPNVTSSSLGYTPLMSAAFTGSKECCWLLLRAGAQLDMRAADGRTAFDFAEKARHLGGGNAGGARDSVLA--------------------------------------------------------------VLRDPPKKIPRSPTSVIATLSERSRLEPEE-------------------------------------------EVPPVEVRWRVPPQASLAPTICGDVERFYVKVWCRGKGQEVIRTKTSTVNVPRRDFCRNQIIDRGIALRKNLCLPQSQTTSAIIHGLQAGEMYSFTVSCVAELEGALRHSPPSCMSKPLLIPESKEDHQWRLGGLLQRV 1992
            G  KL+SL+DLIR E+        PA  LY + G+    +D      GG   +A+N GAVG QEALQAAEHGNS  L++FLQD G P T SRLHH+RWSLLHLAAG                        C+ MG  L+ A  +HR RPEPDCNDGYA C++ LLAAGADPN TS   GYTPLM AA TGS E CWLLLRAGA    R A G+TA DFA+  R    G   GA  + L                                                               VL++PP+ +PRSP  V+A L++RS ++ E                                                 EVRW +P QASL P  CG  ER+ VK W +G+  +V+RT T     PRRDFC++  +DRGIALR NL L   +T S IIH L+ G  YSFTVS +AE++GAL+ SPPS +SK + IP++K+D QW +GG+L ++
Sbjct:  181 GTEKLMSLSDLIRREEGGRTRGGGPAPLLYSNEGEAGELLDGDGFDKGG-GRKAVNNGAVGTQEALQAAEHGNSALLARFLQDNGDPRTTSRLHHMRWSLLHLAAGFNXXXXXXXXXXXXXXXXXXXXXGCAGMGSALSLAGAAHRSRPEPDCNDGYAACIALLLAAGADPNATSIQGGYTPLMGAAVTGSAESCWLLLRAGANPLARTAAGQTALDFAQTPR---AGAPAGAHQAALKXXXXXXXXXXXXXXXXTALDFAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLQNPPRLVPRSPLQVVARLADRSLVDEEPCRRCLXXXXXXXXXXXXXXXXEASHGFRLVTRSQEDDSQCVEXXXXXXEVRWLIPSQASLLPAHCGAAERYLVKCWSQGQASDVVRTNTGNSLKPRRDFCKHGAMDRGIALRNNLSLQAPRTASTIIHNLRPGREYSFTVSLLAEVDGALQQSPPSAVSKTIYIPKTKDDAQWSVGGVLSKM 689
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BLAST of mRNA_P-littoralis_Contig7.271.2 vs. uniprot
Match: A0A7S2CTM4_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CTM4_9STRA)

HSP 1 Score: 314 bits (805), Expect = 3.490e-93
Identity = 165/325 (50.77%), Postives = 219/325 (67.38%), Query Frame = 1 
Query: 1018 GAVGMQEALQAAEHGNSIRLSKFLQDGGSPDTLSRLHHLRWSLLHLAAGCSSMGGRLAFASHRRRPEPDCNDGYATCVSELLAAGADPNVTSSSLGYTPLMSAAFTGSKECCWLLLRAGAQLDMRAADGRTAFDFAEKARHLGGGNAGGARDSVLAVLRDPPKKIPRSPTSVIATLSERSRLEPEEEVPPVEVRWRVPPQASLAPTICGDVERFYVKVWCRGKGQEVIRTKTSTVNVPRRDFCRNQIIDRGIALRKNLCLPQSQTTSAIIHGLQAGEMYSFTVSCVAELEGALRHSPPSCMSKPLLIPESKEDHQWRLGGLLQRV 1992
            GAV  Q+AL+AAEHGNS  L+ +L  GG P  +SRLHH+ WSLLHLA GC+ MGG     ++R RPEPDC +G+ATCVS L+AAGADPNV S    YTPLM A+ +G  +CC LLL+AGA +   A DG+TA D A ++R   G         VL VL +PP+ +PRSP  V A L +    E E+    VEVRW++P   S+A   CG+++R+ V+ + +G+  EV+ +        RRDFC+NQ++DRGIALR+NL LPQ +T S +IHGL  G  Y FTVSC+AE++G++R SPPS MSKPL IP S E+ +W +G +L +V
Sbjct:   16 GAVSTQDALKAAEHGNSDVLAAYLHAGGDPMAVSRLHHMGWSLLHLATGCALMGG--ISNTYRTRPEPDCPNGFATCVSLLMAAGADPNVASKQGHYTPLMGASLSGDADCCRLLLQAGAIVKHMALDGQTALDAANRSRFADG------HMRVLQVLGNPPRLLPRSPLEVTARLLDY--YEGEDRERDVEVRWKIPTTTSMALVKCGEIQRYVVRTYVKGQELEVMHSAVGPGRRQRRDFCQNQVVDRGIALRQNLALPQPRTASTLIHGLIPGVTYHFTVSCIAEIDGSIRDSPPSLMSKPLDIP-SYEEEEWNIGEILDKV 329
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BLAST of mRNA_P-littoralis_Contig7.271.2 vs. uniprot
Match: A0A8J2SBP4_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SBP4_9STRA)

HSP 1 Score: 146 bits (368), Expect = 1.390e-34
Identity = 104/266 (39.10%), Postives = 136/266 (51.13%), Query Frame = 1 
Query:  877 LVSLADLIRNEDKVPATFLYEHTGDTDVAMDARDIGVGGLPNQAMNGGAVGMQEALQAAEHGNSIRLSKFLQDGGSPDTLSRLHHLRWSLLHLAAGCSSMGGRLAFASHRRRPEPDCNDGYATCVSELLAAGADPNVTSSSLGYTPLMSAAFTGSKECCWLLLRAGAQL--DMRAADGRTAFDFAEKARHLGGGNAGGARDSVLAVLRDPPKKIPRSPTSVIATLSERSRLEPEEEVPPVEVRWRVPPQASLAPTICGDVERFYVK 1668
            + SL++LI   D+ P   L ++       M A        P       A   Q+AL+AAEHG++  L+ +L++GG P   SRLHH+ WSLLHLAAGC+  GG  A  ++RRRPEPD   G+A CV  LLAAGA+P   +      PL  A   G      LLLRAGA    ++ A  GR               +    R+++  +L  PPK +PRSP  V A LSE    +  E V  VEVRWR PP A       G VER+ V+
Sbjct:    1 MQSLSELI---DETPPDRLRDNASPDAQRMRASATTEEPPPTAPPRRIAPSTQDALEAAEHGDARALAAYLENGGDPAATSRLHHMGWSLLHLAAGCALAGGPGAAQAYRRRPEPDAPGGFARCVELLLAAGAEP--ATGDERPAPLAGAVLCGDAASARLLLRAGAAAPTEVEAPPGR---------------HTAAEREAMRELLAAPPKLLPRSPLRVEAKLSEYVEGDARERV--VEVRWRPPPPAPGV----GPVERYVVR 240
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BLAST of mRNA_P-littoralis_Contig7.271.2 vs. uniprot
Match: A0A7S2XYK3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYK3_9STRA)

HSP 1 Score: 115 bits (288), Expect = 3.790e-26
Identity = 56/123 (45.53%), Postives = 77/123 (62.60%), Query Frame = 1 
Query: 1642 GDVERFYVKVWCRGKGQEVIRTKTSTVNVPRRDFCRNQIIDRGIALRKNLCLPQSQTTSAIIHGLQAGEMYSFTVSCVAELEGALRHSPPSCMSKPLLIPESKEDHQWRLGGLLQRVGKEIPS 2010
            G+V ++ VK W  GK  +VI   T      RRDFC+N +++RGIALR+NL LP  QT S I+H L  G  YSFTVS +AEL+G L  SPPSCMS+ + IP   ++ +W +G +   +    P+
Sbjct:    1 GEVIKYVVKCWGNGKMVDVIHATTGVGRGQRRDFCQNGVMNRGIALRQNLNLPPPQTASTIVHNLMPGLHYSFTVSAIAELDGVLCESPPSCMSRVVQIPVRDKEDRWMMGEVFNMMSTPNPT 123
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BLAST of mRNA_P-littoralis_Contig7.271.2 vs. uniprot
Match: A0A7S4D9X9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9X9_HETAK)

HSP 1 Score: 94.7 bits (234), Expect = 7.540e-19
Identity = 40/81 (49.38%), Postives = 59/81 (72.84%), Query Frame = 1 
Query: 1732 RRDFCRNQIIDRGIALRKNLCLPQSQTTSAIIHGLQAGEMYSFTVSCVAELEGALRHSPPSCMSKPLLIPESKEDHQWRLG 1974
            RRDFC + ++DRG+ALR+NL LP     SA++H L+ G  YSFTVSCVA + G L  SPPS +S+ + +P+++++ +W LG
Sbjct:   30 RRDFCEDTVVDRGVALRRNLGLPPPPVASAVVHNLRPGAHYSFTVSCVAAVGGRLAESPPSVLSRVVAVPQAEKEDRWMLG 110
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig7.271.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5KLN8_9PHAE0.000e+077.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FV58_ECTSI3.840e-21282.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YST7_9STRA1.880e-9740.55Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2CTM4_9STRA3.490e-9350.77Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A8J2SBP4_9STRA1.390e-3439.10Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S2XYK3_9STRA3.790e-2645.53Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S4D9X9_HETAK7.540e-1949.38Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig7contigP-littoralis_Contig7:1052209..1056785 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1382359.JIAL01000001_gene1796
PFAMsAnk_2
Model size3040
Max annot lvl204432|Acidobacteriia
Hectar predicted targeting categoryother localisation
Exons7
Evalue8.68e-07
EggNOG OGsCOG0666@1|root,COG0666@2|Bacteria,3Y86V@57723|Acidobacteria,2JN7N@204432|Acidobacteriia
Ec32 ortholog descriptionAnkyrin repeat-containing domain
Ec32 orthologEc-12_007460.1
DescriptionAnkyrin repeat
Cds size2172
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig7.271.2prot_P-littoralis_Contig7.271.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig7 1052648..1056356 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791458.541006-UTR-P-littoralis_Contig7:1052208..10526471680791458.541006-UTR-P-littoralis_Contig7:1052208..1052647Pylaiella littoralis U1_48UTRP-littoralis_Contig7 1052209..1052647 -
1680791458.6344285-UTR-P-littoralis_Contig7:1056356..10567851680791458.6344285-UTR-P-littoralis_Contig7:1056356..1056785Pylaiella littoralis U1_48UTRP-littoralis_Contig7 1056357..1056785 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791458.551951-CDS-P-littoralis_Contig7:1052647..10529471680791458.551951-CDS-P-littoralis_Contig7:1052647..1052947Pylaiella littoralis U1_48CDSP-littoralis_Contig7 1052648..1052947 -
1680791458.561684-CDS-P-littoralis_Contig7:1053204..10533721680791458.561684-CDS-P-littoralis_Contig7:1053204..1053372Pylaiella littoralis U1_48CDSP-littoralis_Contig7 1053205..1053372 -
1680791458.5718741-CDS-P-littoralis_Contig7:1053634..10537181680791458.5718741-CDS-P-littoralis_Contig7:1053634..1053718Pylaiella littoralis U1_48CDSP-littoralis_Contig7 1053635..1053718 -
1680791458.5825818-CDS-P-littoralis_Contig7:1054052..10541991680791458.5825818-CDS-P-littoralis_Contig7:1054052..1054199Pylaiella littoralis U1_48CDSP-littoralis_Contig7 1054053..1054199 -
1680791458.599518-CDS-P-littoralis_Contig7:1054490..10546371680791458.599518-CDS-P-littoralis_Contig7:1054490..1054637Pylaiella littoralis U1_48CDSP-littoralis_Contig7 1054491..1054637 -
1680791458.610291-CDS-P-littoralis_Contig7:1054873..10551921680791458.610291-CDS-P-littoralis_Contig7:1054873..1055192Pylaiella littoralis U1_48CDSP-littoralis_Contig7 1054874..1055192 -
1680791458.6204634-CDS-P-littoralis_Contig7:1055349..10563561680791458.6204634-CDS-P-littoralis_Contig7:1055349..1056356Pylaiella littoralis U1_48CDSP-littoralis_Contig7 1055350..1056356 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig7.271.2

>prot_P-littoralis_Contig7.271.2 ID=prot_P-littoralis_Contig7.271.2|Name=mRNA_P-littoralis_Contig7.271.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=724bp
MLSPSAEVMLPRGLLFDDTTASVAHWLNLTYNNIGVPSRPYWQRDWFFSR
LPTYCHVTCQLSPAPGGGPPELMSLSQQGESEAPGRTGRARMHRRSESEA
SGAFGVPRPFGSTNFDNPGWRGGGTNKQRYGWKTNGGSNTSPDDDGNPKL
VSLADLIRNEDKVPATFLYEHTGDTDVAMDARDIGVGGLPNQAMNGGAVG
MQEALQAAEHGNSIRLSKFLQDGGSPDTLSRLHHLRWSLLHLAAGCSSMG
GRLAFASHRRRPEPDCNDGYATCVSELLAAGADPNVTSSSLGYTPLMSAA
FTGSKECCWLLLRAGAQLDMRAADGRTAFDFAEKARHLGGGNAGGARDSV
LAVLRDPPKKIPRSPTSVIATLSERSRLEPEEEVPPVEVRWRVPPQASLA
PTICGDVERFYVKVWCRGKGQEVIRTKTSTVNVPRRDFCRNQIIDRGIAL
RKNLCLPQSQTTSAIIHGLQAGEMYSFTVSCVAELEGALRHSPPSCMSKP
LLIPESKEDHQWRLGGLLQRVGKEIPSPGTAGEGGVAQVQVRRGTDQSPT
NIEQRRGPAKNFSVSWAKDDLAPGIGLRQSEIYRVGNDVNPSPPIDFGRA
LSSNDKEWETIDASPPVPARRRSQSYVSSVTRADSFQQISPADQTFRSSM
GGLGYSPPRTSPPLEEDTEERALFPDPAPSVSPAGRVEGEIGVGGGALTI
STNRSSGGFHASESFQDEGCSVS*
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mRNA from alignment at P-littoralis_Contig7:1052209..1056785-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig7.271.2 ID=mRNA_P-littoralis_Contig7.271.2|Name=mRNA_P-littoralis_Contig7.271.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=4577bp|location=Sequence derived from alignment at P-littoralis_Contig7:1052209..1056785- (Pylaiella littoralis U1_48)
GCTCTTTCTCAGGAATCATTGCGCCCTGATCACGACATAGTGGCCTCACT
GATCATCAGCGCTGCAAATCGAAGGTACCGTGTCACAATTGTTGTCGTTT
TTTGTATATTTGGACTGCTAAGTACTGAAGTATAATACCCCAGCAGGGTA
CTGTAGGGAAGCCATTTTTAGCTGTCATAGGTGTACCTACAAACCTAGTC
CGCCGAAGCCTTATATGTCTCCTAATGGCTTTGATGTGCAATATTGCTGA
ACTACGTAAAAAATGCCGTGGGCGATGATGTGAAGAACACAATCGATTAT
TTGTCAATTCTGAGCGATGAAGTTTTATCACAGGACAGTGGCAATGATCC
TGGCACCTTGTACTTTGATACTGAGGAGAATGTTTTGTAGGCGGTTCTTC
TGATTGCAAGCGACACCAGCAGGAAGGTAATGCTCTCGCCAAGCGCCGAG
GTCATGCTGCCCAGGGGCTTGCTGTTCGATGATACCACTGCAAGTGTGGC
GCACTGGTTAAATTTGACTTACAACAATATTGGTGTTCCTTCACGCCCCT
ATTGGCAGCGTGATTGGTTTTTTTCTCGTCTCCCCACCTATTGCCACGTC
ACCTGCCAGCTCTCGCCCGCCCCAGGAGGAGGCCCTCCGGAATTAATGAG
TCTATCTCAGCAGGGCGAGTCCGAAGCACCAGGCAGGACGGGCCGGGCTC
GTATGCACCGTCGCTCCGAGAGCGAGGCCAGCGGCGCGTTCGGTGTGCCT
CGTCCCTTCGGCAGCACCAACTTCGACAACCCCGGTTGGCGAGGCGGAGG
CACCAACAAACAACGGTATGGGTGGAAGACGAATGGTGGCAGTAATACAT
CTCCAGATGATGACGGAAATCCGAAGTTAGTCTCTCTGGCTGATCTGATC
CGCAACGAGGACAAGGTGCCGGCTACGTTTTTGTATGAGCACACAGGCGA
TACGGACGTGGCGATGGACGCTCGGGACATCGGGGTGGGAGGCCTCCCCA
ACCAAGCCATGAACGGTGGGGCCGTGGGGATGCAGGAAGCGCTACAAGCG
GCGGAGCATGGTAATTCAATTCGCCTGTCAAAGTTTTTGCAAGATGGCGG
CAGCCCGGACACCCTGTCCAGGCTCCACCATTTACGTTGGAGCCTGCTAC
ATCTAGCTGCAGGATGCTCGTCCATGGGAGGCCGTCTAGCCTTTGCATCT
CACCGTCGTCGTCCCGAGCCAGACTGCAACGATGGTTATGCGACCTGTGT
ATCGGAACTTCTTGCTGCGGGTGCTGATCCTAACGTCACCTCAAGTAGTT
TGGGCTATACACCCTTGATGAGTGCAGCGTTTACTGGCAGCAAGGAGTGC
TGCTGGTTGTTGCTGAGGGCTGGAGCTCAACTGGACATGAGGGCGGCTGA
TGGACGAACTGCGTTCGACTTCGCCGAAAAAGCCAGGTGAGATATATTGT
TCAAGCAAGTATGTGTCGCCCCAAATATCTGAACCATTCAAAGCAAGTGC
CGCAGTCCTGACGCCGCCAATACCGCAACAGCTCTATTCCATTTAGTTTT
CGCTGTTACCGCACTCCCGTGCCTCGTATCGCACACGCTATAGGCACCTT
GGCGGGGGCAATGCGGGGGGAGCACGCGATTCTGTCTTGGCCGTCCTTCG
CGACCCTCCAAAAAAGATTCCACGGTCGCCGACTTCGGTAATTGCAACGC
TATCTGAGCGATCGCGCCTGGAGCCAGAAGAAGAAGTACCTCCTGTCGAG
GTGCGGTGGCGGGTGCCGCCACAGGCCAGTCTCGCTCCGACTATCTGCGG
AGACGTTGAGAGATTTTACGTGAAAGTGTGGTGTCGAGGAAAAGGGCAGG
AGGTGATACGGACCAAGACCTCGACAGTAAACGTGCCTCGTAGAGACTTC
TGCCGAAATCAGGTGAAACACGAGAGTTATATGAAACGACCGCCGAGCAT
AGTGCGCCCTTTGTATTTGCGCCAAATGGTCAGCAACAACGTGGTAATCC
TGCATTTGAATTGAATTGGACTCCTTGCTTCACACTTTGTCGAAAATACG
TACATACAGTGGCCGTGATCGCGTACAACGCCCATGTTTTTACACCAAGA
AAAAACCTGTTCGCTGTTGTCAACCCTCGAATTTTGAATTTGAACCAGAT
CATCGACAGGGGAATTGCTCTTCGTAAGAACCTTTGCCTTCCTCAGTCGC
AGACGACGTCGGCCATCATCCACGGCCTCCAGGCTGGGGAGATGTACTCC
TTCACTGTTTCTTGCGTTGCGGAGCTAGAAGGCGCTCTCCGACACGTGAG
CAACACTGACTTCGTTCAGCTTCGGGCTGCTGGTGGTACACAGCACTTGG
CTATCTTGTACGTAGCTGCCAGCAGACCCATCAAAATAAAACGAGGAAGG
CTACACAACAATCAGCAGGCTCTGGTTTCGATAGGTCGGTCTGCGTTCGT
TCATGACATCTGGACGCAAAAGCGTGTAATGTGTTGTGGGTGATCCAGCC
TGCCCCCTTTGTAAGTGGACAATTTTGATGCTAACGTCCACACGCCTCCT
TCCGACCCCTTGCGCCGATCAACATCTCTTTTGAAGTCCCCGCCGTCATG
CATGTCGAAGCCGCTGTTGATCCCGGAATCGAAGGAGGACCACCAATGGC
GACTAGGAGGGTTGCTTCAAAGGGTTGGGAAGGAAATACCCTCTCCCGGT
ACCGCCGGAGAAGGCGGCGTAGCACAAGTACAGGTGGGAGACTGGCTTTG
ATACAGAGCGCGGCCGCTGTCAAGATTTTGTGGCAACTGCGGCCACCATG
CCGACGGGGGTTCGAACAAAAATCAGCGTATTTCTTATAAGGCTTTATTT
CGTCTCAAAAGTTAGACTTTCCCGATGTTTCTCGTGTCTACCGCTGTGCT
TTGGTGTTGATTGTACGATAGGCTTTCATTCAGCAGTGTAGATTGTTGAG
CAGTGATGATGCATAATCAGTGTGTGGGGCTACTGCTGTACGTGTATCAG
CTTGAACAAAACAGCAATTTTCCAAAGCATCCCACCGTGTCTTGCACGTG
GTGTGTGGAAATAATAGGTGAGACGTGGGACCGACCAGTCTCCAACAAAT
ATCGAGCAGCGAAGAGGGCCCGCGAAGAATTTCAGTGTTTCCTGGGCTAA
GGTGCGGCACTCAGTCCTTGCTGGGGATGGGCTGGGGTTTTGTTTTGGTG
CGCCAGGCAGCACAGGTGTGCCCGTTTTAGCAAAGGGTTCCTCGGGAGGC
CGACGAGGTTTGTGAAAAGATGGCTCCACCTCTACTCAAGCTGGAAGCGA
ACGAAGAGTTGTGCTGAGACAAATGGCGACTAACGCACACTAGCCGGCCG
CAGCATCCTAGATATGTGATATGTGACATCATCTCCCGTTCATGTCTTCG
CTCTGACGAACAGGATGATTTGGCGCCTGGAATAGGCCTACGACAATCTG
AAATTTATCGCGTTGGCAACGACGTGAACCCGTCGCCCCCCATCGACTTT
GGGCGAGCCCTTTCCAGCAATGACAAAGAATGGGAGACGATAGACGCCTC
CCCTCCGGTTCCTGCGCGACGTCGTTCGCAGGTAACAATGTCGTGGCCTT
CTCAGAAACGAGGCGGTGCATATGATACCACGAAGACAGACAGAAAGCGA
TTTGACGTGAGATCTATCCCGTCGATGGGAAACGTTCTCGATCCGTAAGA
ACTTCAAAGCGTGGGCTTCTTCATTACCTTTGTAGCCCAGGCCATCACAG
CGTTGTCGGCTGTTGACAACCTTCTGTGAATCAGGCAGCGATCTTTCTGT
TTACTCGTTCGGGCCTTTCCCCCCCCCTGCTTGATCAGTCGTACGTGAGC
TCTGTGACAAGAGCCGACTCGTTCCAACAGATATCGCCAGCCGACCAGAC
TTTTCGCTCCTCGATGGGGGGCCTAGGGTACTCTCCCCCGAGGACATCCC
CACCTCTGGAGGAAGACACAGAAGAGCGGGCTTTGTTTCCTGATCCGGCG
CCGAGTGTGTCACCCGCGGGGAGGGTTGAGGGAGAAATCGGCGTGGGGGG
GGGTGCTCTGACCATCTCGACGAATCGGTCATCCGGGGGGTTTCACGCAA
GCGAATCCTTCCAAGACGAAGGCTGTAGCGTTAGTTAGCTGCTAGCTATA
TCGGCGGATTATTTATGAGAGAGAAAGGGAAAAGCGCTTACATTTTCCTG
ACAGTTGATTGCGGTAAGGTTCCGAACGTTTTGGCAAAGCGCAGACCAAA
TTGTAGAGTTCGAGGTTGTAGAGGGTGCTCTATACCGCGGCCTAATGGGT
TGTGTTGTTGTTGAGCCGTCCACGACAGAATTTGTCACCTACTGCCGGAT
AAGTGCATCAGACGAAATTTGGTTAAGTGCGTCGTAATGATGCTGCGTGC
GTTAATGATGTGTAACTAATTCGAGGCGTGTTTTTCACTGATGAAAAACT
CTTTTCGATACCGCAGGGAATCAATCACGAGGGTTCATATATTTTTGAAG
ATATACTTCGTATATATATTTCAATACGAAGTACTTGGTATTTTTTTTAT
TGGTCGCACAGCCAAACACCAAACACC
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Coding sequence (CDS) from alignment at P-littoralis_Contig7:1052209..1056785-

>mRNA_P-littoralis_Contig7.271.2 ID=mRNA_P-littoralis_Contig7.271.2|Name=mRNA_P-littoralis_Contig7.271.2|organism=Pylaiella littoralis U1_48|type=CDS|length=2172bp|location=Sequence derived from alignment at P-littoralis_Contig7:1052209..1056785- (Pylaiella littoralis U1_48)
ATGCTCTCGCCAAGCGCCGAGGTCATGCTGCCCAGGGGCTTGCTGTTCGA
TGATACCACTGCAAGTGTGGCGCACTGGTTAAATTTGACTTACAACAATA
TTGGTGTTCCTTCACGCCCCTATTGGCAGCGTGATTGGTTTTTTTCTCGT
CTCCCCACCTATTGCCACGTCACCTGCCAGCTCTCGCCCGCCCCAGGAGG
AGGCCCTCCGGAATTAATGAGTCTATCTCAGCAGGGCGAGTCCGAAGCAC
CAGGCAGGACGGGCCGGGCTCGTATGCACCGTCGCTCCGAGAGCGAGGCC
AGCGGCGCGTTCGGTGTGCCTCGTCCCTTCGGCAGCACCAACTTCGACAA
CCCCGGTTGGCGAGGCGGAGGCACCAACAAACAACGGTATGGGTGGAAGA
CGAATGGTGGCAGTAATACATCTCCAGATGATGACGGAAATCCGAAGTTA
GTCTCTCTGGCTGATCTGATCCGCAACGAGGACAAGGTGCCGGCTACGTT
TTTGTATGAGCACACAGGCGATACGGACGTGGCGATGGACGCTCGGGACA
TCGGGGTGGGAGGCCTCCCCAACCAAGCCATGAACGGTGGGGCCGTGGGG
ATGCAGGAAGCGCTACAAGCGGCGGAGCATGGTAATTCAATTCGCCTGTC
AAAGTTTTTGCAAGATGGCGGCAGCCCGGACACCCTGTCCAGGCTCCACC
ATTTACGTTGGAGCCTGCTACATCTAGCTGCAGGATGCTCGTCCATGGGA
GGCCGTCTAGCCTTTGCATCTCACCGTCGTCGTCCCGAGCCAGACTGCAA
CGATGGTTATGCGACCTGTGTATCGGAACTTCTTGCTGCGGGTGCTGATC
CTAACGTCACCTCAAGTAGTTTGGGCTATACACCCTTGATGAGTGCAGCG
TTTACTGGCAGCAAGGAGTGCTGCTGGTTGTTGCTGAGGGCTGGAGCTCA
ACTGGACATGAGGGCGGCTGATGGACGAACTGCGTTCGACTTCGCCGAAA
AAGCCAGGCACCTTGGCGGGGGCAATGCGGGGGGAGCACGCGATTCTGTC
TTGGCCGTCCTTCGCGACCCTCCAAAAAAGATTCCACGGTCGCCGACTTC
GGTAATTGCAACGCTATCTGAGCGATCGCGCCTGGAGCCAGAAGAAGAAG
TACCTCCTGTCGAGGTGCGGTGGCGGGTGCCGCCACAGGCCAGTCTCGCT
CCGACTATCTGCGGAGACGTTGAGAGATTTTACGTGAAAGTGTGGTGTCG
AGGAAAAGGGCAGGAGGTGATACGGACCAAGACCTCGACAGTAAACGTGC
CTCGTAGAGACTTCTGCCGAAATCAGATCATCGACAGGGGAATTGCTCTT
CGTAAGAACCTTTGCCTTCCTCAGTCGCAGACGACGTCGGCCATCATCCA
CGGCCTCCAGGCTGGGGAGATGTACTCCTTCACTGTTTCTTGCGTTGCGG
AGCTAGAAGGCGCTCTCCGACACTCCCCGCCGTCATGCATGTCGAAGCCG
CTGTTGATCCCGGAATCGAAGGAGGACCACCAATGGCGACTAGGAGGGTT
GCTTCAAAGGGTTGGGAAGGAAATACCCTCTCCCGGTACCGCCGGAGAAG
GCGGCGTAGCACAAGTACAGGTGAGACGTGGGACCGACCAGTCTCCAACA
AATATCGAGCAGCGAAGAGGGCCCGCGAAGAATTTCAGTGTTTCCTGGGC
TAAGGATGATTTGGCGCCTGGAATAGGCCTACGACAATCTGAAATTTATC
GCGTTGGCAACGACGTGAACCCGTCGCCCCCCATCGACTTTGGGCGAGCC
CTTTCCAGCAATGACAAAGAATGGGAGACGATAGACGCCTCCCCTCCGGT
TCCTGCGCGACGTCGTTCGCAGTCGTACGTGAGCTCTGTGACAAGAGCCG
ACTCGTTCCAACAGATATCGCCAGCCGACCAGACTTTTCGCTCCTCGATG
GGGGGCCTAGGGTACTCTCCCCCGAGGACATCCCCACCTCTGGAGGAAGA
CACAGAAGAGCGGGCTTTGTTTCCTGATCCGGCGCCGAGTGTGTCACCCG
CGGGGAGGGTTGAGGGAGAAATCGGCGTGGGGGGGGGTGCTCTGACCATC
TCGACGAATCGGTCATCCGGGGGGTTTCACGCAAGCGAATCCTTCCAAGA
CGAAGGCTGTAGCGTTAGTTAG
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