prot_P-littoralis_Contig7.268.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig7.268.1
Unique Name	prot_P-littoralis_Contig7.268.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	483

Homology

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BLAST of mRNA_P-littoralis_Contig7.268.1 vs. uniprot
Match: D7FV60_ECTSI (Trinucleotide repeat containing 4, isoform CRA_d n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV60_ECTSI)

HSP 1 Score: 775 bits (2001), Expect = 1.000e-279
Identity = 410/487 (84.19%), Postives = 422/487 (86.65%), Query Frame = 0

Query:    1 MAQRSGDDELADRLGGINLEGLSGGEGKSSVGPAGLIHKDSDAIKLFVGQIPKHMEEDDLRPVFEEFGEIFDLAVIRDKISGLHRGCAFLTYCARASADAAIAALHGQRRLERGQNPLQVRPAEGQAEQENKLFVGMAPKSANEDEIRAVFASYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGAQAAAGRLG-MASSPGRHGSGPHPEAGGWMGQPGGGGQGAGYPYAMPAQAMSPHVMSGMPYGMPYGGAPAPGAPAQGSYVYYPYGAPGYQPQPGGPGQYHSGPPSPTRGGGGYXXXGHPRSPSGSDRHRARGIHEGEAGGGG----SRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSQPSHAEAAIAQMNGFQIGSKRLKVQHKRRGQSTDDPDDRDEGGGGPGYGEQAQGDFYPHPDYMGHQAG 482
            MAQRS DDE+ADR+  INLEGL+GGE KSS+GPAGLIHKDSDAIKLFVGQIPKHMEE+DLRPVFEEFGEIFDLAVIRDKISGLHRGCAFLTYCAR SADAAIAALHGQRRL+RGQNPLQVRPAEGQAEQENKLFVGMAPKSANEDEIRAVFA YGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRG QAAAGRLG +  SPGRHGSGPHPEAGGWMG PG GGQGAGYPY MP   MSPH+MSGMPYGM YGG  APGAPAQGSYVYYPYGAPGY PQPGGPGQYHSGPPSP+RGGG  XXX                              +RPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYS PSHAEAAIAQMNGFQIGSKRLKVQHKRRGQSTDDPD          YG+Q QGD+YPHPDYMGHQ G
Sbjct:    1 MAQRSADDEVADRMANINLEGLAGGEAKSSIGPAGLIHKDSDAIKLFVGQIPKHMEEEDLRPVFEEFGEIFDLAVIRDKISGLHRGCAFLTYCARVSADAAIAALHGQRRLDRGQNPLQVRPAEGQAEQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTQAAAGRLGGLIGSPGRHGSGPHPEAGGWMGHPGAGGQGAGYPYPMPGPPMSPHMMSGMPYGMAYGGGQAPGAPAQGSYVYYPYGAPGYPPQPGGPGQYHSGPPSPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSLPSHAEAAIAQMNGFQIGSKRLKVQHKRRGQSTDDPDXXXXXXXXXXYGDQGQGDYYPHPDYMGHQDG 487

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BLAST of mRNA_P-littoralis_Contig7.268.1 vs. uniprot
Match: A0A836CBS7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBS7_9STRA)

HSP 1 Score: 350 bits (898), Expect = 2.420e-112
Identity = 217/425 (51.06%), Postives = 258/425 (60.71%), Query Frame = 0

Query:   35 GLIHKDSDAIKLFVGQIPKHMEEDDLRPVFEEFGEIFDLAVIRDKISGLHRGCAFLTYCARASADAAIAALHGQRRLERGQNPLQVRPAEGQAEQENKLFVGMAPKSANEDEIRAVFASYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGAQAAAGRLGMASSPGRHGSGPHPEAGGWMGQPGGGGQGAGYPYAMPAQAMSPHVMSGMPYGMPYGGAPAPGAPAQGSYVYYPYGAPGYQPQPGGPGQYHSGPPSPTRGGGGYXXXGHPRSPSGSDRHRARGIHEGEA--------GGGGS---------RPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSQPSHAEAAIAQMNGFQIGSKRLKVQHKR 442
            GL+ KD DAIKLF+GQ+PK ME D L P+F EFGE+FDLA+IRDK +G+HRGCAFLTYC RA+A+AA AALHG R+L   QN LQVRPAEG  E++NKLFVGM PK+ANE E+R VF+S+G LRE+H+IRN DG+NKGCAFVK+  R+ A+ AI+ALHE+YT++G PRPLVVKFADN +  +    R+     PG   S P+     W   PGG         A+   A++     G P    YGG                          G  GQ    PP P            P  PS                       GGG S         RP EGP  +NLFIYHLP DL+DADLATAFA FG+V+SAKVY+DR + ESKGFGFVSY  P  A AAI  MNGFQIG+KRLKVQHKR
Sbjct:   19 GLLRKDPDAIKLFIGQVPKTMEADALLPLFSEFGEVFDLAIIRDKQTGMHRGCAFLTYCTRAAAEAATAALHGNRKLVGSQNALQVRPAEGHNERDNKLFVGMVPKAANEQELRKVFSSFGELREVHIIRNSDGSNKGCAFVKFMERECAVQAIDALHERYTLEGAPRPLVVKFADNNK--RNVVPRMLTGPIPGGTDSSPY-----WS-PPGG---------ALGNLALAGGSQQGAPM-YSYGGGYXXXXXXXXXXXXXXXXXXXXXXX-GSSGQQMGYPPVP------------PAGPSAXXXXXXXXXXXXXXXXXXXVPQGGGPSALVEELTPARPQEGPAKSNLFIYHLPHDLTDADLATAFASFGNVISAKVYVDRVTNESKGFGFVSYDNPEAAAAAIVHMNGFQIGTKRLKVQHKR 412

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BLAST of mRNA_P-littoralis_Contig7.268.1 vs. uniprot
Match: A0A836CK81_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK81_9STRA)

HSP 1 Score: 328 bits (841), Expect = 5.420e-103
Identity = 209/411 (50.85%), Postives = 247/411 (60.10%), Query Frame = 0

Query:   35 GLIHKDSDAIKLFVGQIPKHMEEDDLRPVFEEFGEIFDLAVIRDKISGLHRGCAFLTYCARASADAAIAALHGQRRLERGQNPLQVRPAEGQAEQENKLFVGMAPKSANEDEIRAVFASYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADN-KRGAQAAAGRLGMASSPGRHGSGPHPEAGGWMGQPGGGGQGAGYPYAMPAQAM--SPHVMSGMPYGMPYGGAPAPGAPAQGSYVYYPYGAPGYQPQPGGPGQYHSGPPSPTRGGGGYXXXGHPRSPSGSDRHRARGIHEGEAGGGGSRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSQPSHAEAAIAQMNGFQIGSKRLKVQHKR 442
            GL+ KD DAIKLFVGQIPKHME D L P+F EFG+IFDL +IRDK +G+HRGCAFLT+C RASA+AAI ALHG R+L    N LQVR AE QAE+E KLFVGM   +A+E+++R +F+ YG +RE+H+IRN DG+NKGCAFVKY +R+ A  AI+AL+EQ TM+G PRPL+V+FAD+ KRGA                    HP  G           G   PY  PA     SP   +  PYG   GGA A  APA   Y     GA                           XXX                          SRP EGP  +NLFIYH P DL+DADLATAFA FG+V+SAKVY+DR + ESKGFGFVSY  P  A  AIA MNGF IG+KRLKVQ+KR
Sbjct:    9 GLLQKDPDAIKLFVGQIPKHMESDALLPLFSEFGDIFDLTIIRDKQTGVHRGCAFLTFCTRASAEAAIQALHGNRKLAGAVNALQVRAAEAQAEREVKLFVGMVASTADEEDVRGIFSVYGEIREVHIIRNADGSNKGCAFVKYASREHAAAAIDALNEQMTMEGAPRPLLVRFADSSKRGA--------------------HPLRG----------AGDSSPYWSPAAGAIASPAASATNPYGEDSGGAYAAAAPAD--YA----GAXXXXXXXXXXXXXXX-----------XXXXXXXXXXXXXXXXXXXXXXXXXXRDHPSRPQEGPARSNLFIYHWPADLTDADLATAFASFGNVISAKVYMDRLTNESKGFGFVSYDNPESAAVAIAHMNGFAIGNKRLKVQYKR 372

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BLAST of mRNA_P-littoralis_Contig7.268.1 vs. uniprot
Match: A0A485KNC1_9STRA (Aste57867_9466 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KNC1_9STRA)

HSP 1 Score: 321 bits (822), Expect = 6.010e-102
Identity = 202/427 (47.31%), Postives = 250/427 (58.55%), Query Frame = 0

Query:   42 DAIKLFVGQIPKHMEEDDLRPVFEEFGEIFDLAVIRDKISGLHRGCAFLTYCARASADAAIAALHGQRRLERGQNPLQVRPAEGQA--EQENKLFVGMAPKSANEDEIRAVFASYGTLREIHVIRNQD-GTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGAQAAAGRLGMASSPGRHGSGPHPEAGGWMGQPGGGGQGAGYPYAMPAQAMSPHVMSGMPYGM------PYGGAPAPGAPAQ-GSYVYY-PYGAPGYQPQPGGPGQYHSGPPSPTRGGGGYXXXGHPRSPSGSDRHRARGIHEGEAGGGGSRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSQPSHAEAAIAQMNGFQIGSKRLKVQHKRRGQSTDDPDDRDEGG 457
            DA+KLFVGQ+P+ M+ED+LRPV E FG ++D+ +IRDKISG HRGCAF+TYC+R +A+AAI  LH Q  L    NPLQVRPAEGQA   QE+KLF+GM PK A+E +IRAVF S+G + EI+++R+   G +KGCAF+KY  R +A  AI+ ++   TM  G  PLVVKFAD++R     A      S+           A  W   PG     A  P+    Q    ++     +G       P      P APA   +++YY PYG PG  P                           P +P G     A      ++    S   EGP GANLFIYHLP DL+DADLATAFAPFG V+SAKVY+D+ +GESKGFGFVSY     A+AAIA MNGFQIGSKRLKVQHKR     D  D  DE G
Sbjct:   31 DAVKLFVGQVPRSMDEDELRPVLEAFGPLYDIVIIRDKISGAHRGCAFVTYCSRDAAEAAIETLHNQVTLPMSSNPLQVRPAEGQAGASQEHKLFIGMIPKHADEADIRAVFESHGEIEEIYILRHPGTGQSKGCAFLKYKDRHAASTAIDMINGVVTMDRGTAPLVVKFADSRRQRIQRARNQAATSA-----------AAYWQMPPG-----AAIPFPQLQQIQQQYMQQMQAFGAQAAALNPSSNGVPPPAPANPAAFMYYNPYGIPGAYPS-------------------------FPAAPVGFPLDPAAAAAASDSAARASSQLEGPIGANLFIYHLPHDLTDADLATAFAPFGTVISAKVYMDKNTGESKGFGFVSYDSAQAADAAIASMNGFQIGSKRLKVQHKRVHHRDDYLDGDDENG 416

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BLAST of mRNA_P-littoralis_Contig7.268.1 vs. uniprot
Match: A0A7S1BYN5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BYN5_9STRA)

HSP 1 Score: 326 bits (836), Expect = 1.080e-101
Identity = 207/432 (47.92%), Postives = 262/432 (60.65%), Query Frame = 0

Query:   40 DSDAIKLFVGQIPKHMEEDDLRPVFEEFGEIFDLAVIRDKISGLHRGCAFLTYCARASADAAIAALHGQRRLERGQNPLQVRPAEGQ------AEQENKLFVGMAPKSANEDEIRAVFASYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGAQAAAGRLGMAS----SPGRHGSGPHPEAGGWMGQPGGGGQGAGYPYAMPAQAMSPHVMS--GMPYGMPYGGAPAP---GAPAQGSYVYYPYGAPGYQPQPGGPGQY--HSGPPSPTRGGGGYXXXGHPRSPSGSDRHRARGI------------HEGEAGGGGSRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSQPSHAEAAIAQMNGFQIGSKRLKVQHKR 442
            D + +KLFVGQ+PK + E+DL P F EFG I +L VIRDK +G HRGCAF+TY + +SA+     LH Q     G+ P+Q+RPA G        EQENKLF+GM  ++A+E+ IR VFAS+G +REI++IRN DG+NKGCAF+KY+ R SAL AI  L+ +  M G  RPL+VKFAD K  AQ  A   GM+S    SPGR  SG +P +                PY +P   + P+  +    P G+P+  +  P   G  +  +++Y P G  GY   P    Q   HSG  S  +  GG      P        H +RG             H  +     +RP EGPPGANLFIYHLP DL+DADLATAFAPFG+V+SAKVY+D+ +GESKGFGFVSY   + A+AAI QMNGFQIGSKRLKVQHKR
Sbjct:  122 DDEPVKLFVGQVPKSLAEEDLFPTFSEFGPIKELTVIRDKHTGQHRGCAFVTYWSSSSAERVQEVLHDQLTFTNGRKPVQIRPAIGSNSTPTTPEQENKLFIGMTSRNADENAIREVFASFGEIREIYIIRNADGSNKGCAFLKYSQRDSALSAITMLNNKVVMDGASRPLIVKFADTK--AQRRARGNGMSSRGLGSPGRGQSGHNPSS----------------PYFIPPVPVYPNYQAQRAPPIGIPHQYSQYPPQYGQSSSQNFMYVPTGPYGYPSAPFNHNQMGNHSGGGSGAQQPGGAPSAFEPVPNPNHAVHPSRGSPRTSPAPGKVYQHRSDGPNTNTRPKEGPPGANLFIYHLPHDLTDADLATAFAPFGNVISAKVYVDKFTGESKGFGFVSYDVVTSADAAIEQMNGFQIGSKRLKVQHKR 535

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BLAST of mRNA_P-littoralis_Contig7.268.1 vs. uniprot
Match: W7U5L7_9STRA (Rna binding protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5L7_9STRA)

HSP 1 Score: 322 bits (825), Expect = 2.400e-100
Identity = 228/503 (45.33%), Postives = 272/503 (54.08%), Query Frame = 0

Query:   33 PAGLIHKDSDAIKLFVGQIPKHMEEDDLRPVFEEFGEIFDLAVIRDKISGLHRGCAFLTYCARASADAAIAALHGQRRLERGQNPLQVRPAEGQAEQENKLFVGMAPKSANEDEIRAVFASYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGAQAAAG--------RLG---------------------MASSPGRHGSGPHPE------------AGGWMG----QPGGGGQGAGYPYAMPAQAMSPHVMSGMPYGM-------------PYGGAPAP-GAPAQGSYVYYPYGAPGYQPQ--------PGGPGQYHSGPP----------------SPTRGGGGYXXXGHPRSPSGSDRHRARGIHEGEAGGG----------GSRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSQPSHAEAAIAQMNGFQIGSKRLKVQHKR 442
            PAGL  KD DAIKLFVGQIPK M ED LRP F E+G IF+L VIRDK SG+HRGCAFLTYC + +A AA  ALH + +L   QN LQVRPA+   E+ENKLFVGM PK+ +E  +  +FA +G ++EIH+IR+ +G  KGCAF+K+  R SA+ AIEAL+E+  ++G  RP+VV+FA++KR  +   G        R G                     M   PG  G   HP             AGG +G     P G G+G       P    SP+  SG PY M             P+   P P G      + Y PYGA    P         PGGP Q H                    SP   GGG         P G   + A G   G    G          GS+P EGP GANLFIYHLP DL+DADLATAF PFG V+SAKVY+D+ SGESKGFGFVSY  P  A+AAI  MNGFQIG+KRLKVQHKR
Sbjct:   25 PAGLT-KDGDAIKLFVGQIPKDMGEDALRPFFAEYGPIFELTVIRDKTSGMHRGCAFLTYCTKEAAQAASLALHNKLKLPDAQNALQVRPADLHTERENKLFVGMLPKNVDEGLVEGLFAPFGKIKEIHIIRSVEGEGKGCAFLKFVERSSAIQAIEALNERQVVEGASRPMVVRFAESKRSGEGGQGAGVXXXXXRRGGXXXXXXXXXXGPMEGLLMAPMMMVPGPLGHSLHPPNLPLRGGSEGGAAGGGLGVAGLSPTGRGKGXXXXXEAPGGGSSPY--SGAPYWMLGPHGQPQASAHFPFQAGPVPMGMLGLPHHQYLPYGAVRAPPYLYYPPYFGPGGP-QGHGAAADGXXXXXXXXXXXXXGSPFVYGGGV--------PGGMRVNTAVGAPHGAGHAGAFASRGGXXXGSKPLEGPAGANLFIYHLPHDLTDADLATAFNPFGTVVSAKVYVDKNSGESKGFGFVSYDSPLAADAAIKAMNGFQIGTKRLKVQHKR 515

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BLAST of mRNA_P-littoralis_Contig7.268.1 vs. uniprot
Match: A0A1V9ZMV5_9STRA (CUG-BP-and ETR-3-like factor n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZMV5_9STRA)

HSP 1 Score: 317 bits (813), Expect = 8.660e-100
Identity = 209/431 (48.49%), Postives = 255/431 (59.16%), Query Frame = 0

Query:   42 DAIKLFVGQIPKHMEEDDLRPVFEEFGEIFDLAVIRDKISGLHRGCAFLTYCARASADAAIAALHGQRRLERGQNPLQVRPAEGQA--EQENKLFVGMAPKSANEDEIRAVFASYGTLREIHVIRNQ-DGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGA-QAAAGRLGMASS------PGRHGSGPHPEAGGWMGQPGGGGQGAGYPYAMPAQAMSPHVMSGMPYGMPYGGAPAPGAPAQGSYVYYPYG---APGYQPQPGGPGQYHSGPPSPTRGGGGYXXXGHPRSPSGSDRHRARGIHEGEAGGGGSRPA---EGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSQPSHAEAAIAQMNGFQIGSKRLKVQHKRRGQSTDDPDDRDEG 456
            DA+KLFVGQ+P+ MEE DLRP+ E FG ++D+ +IRDK+SG HRGCAF+T+C RA+A+AAI  LH Q  L    NPLQVRPAEGQA   QE+KLF+GM PK A+E  IR VFA +G + EI+++R+   G +KGCAF+K+  R SA  AIEA +  YTM  G  PLVVKFAD++R   Q A  +   A++      PG  G+ P P+            Q     Y    QA     ++G    M  G +P+P A       Y  Y    A GY   P G       PP P                             G A   G+R A   EGP GANLFIYHLP DL+DADLATAFAPFG V+SAKV++D+ +GESKGFGFVSY   + A+AAIA MNGFQIGSKRLKVQHKR  Q  D  DD DEG
Sbjct:   90 DAVKLFVGQVPRTMEEADLRPILEAFGPLYDIVIIRDKVSGTHRGCAFVTFCTRAAAEAAIETLHNQVTLPMSSNPLQVRPAEGQAGASQEHKLFIGMIPKHADESSIREVFAPHGAIEEIYILRHPATGQSKGCAFLKFKDRHSASTAIEAFNGTYTMDRGTAPLVVKFADSRRQRIQRARNQAATAAAAYWQLPPG--GTIPFPQL-----------QQIQQQYMQQMQAFGAQALAGQ---MSPGSSPSPAANPAAFMYYNQYAFAAASGYTGFPSG-----VAPPFPL--------------------DALATAVPGAAAASGARAATQLEGPAGANLFIYHLPHDLTDADLATAFAPFGTVISAKVFMDKNTGESKGFGFVSYDSVAAADAAIASMNGFQIGSKRLKVQHKRVHQREDYGDDEDEG 479

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BLAST of mRNA_P-littoralis_Contig7.268.1 vs. uniprot
Match: A0A1W0A7F0_9STRA (CUG-BP-and ETR-3-like factor n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A7F0_9STRA)

HSP 1 Score: 312 bits (799), Expect = 1.850e-98
Identity = 206/432 (47.69%), Postives = 255/432 (59.03%), Query Frame = 0

Query:   42 DAIKLFVGQIPKHMEEDDLRPVFEEFGEIFDLAVIRDKISGLHRGCAFLTYCARASADAAIAALHGQRRLERGQNPLQVRPAEGQA--EQENKLFVGMAPKSANEDEIRAVFASYGTLREIHVIRNQ-DGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGA-QAAAGRLGMASSPGRHGSGPHPEAGGWMGQPGGGGQGAGYPYAMPAQAMSPHVMSGMPYG-MPYGGAPAPG-----APAQGSYVYY-PYG---APGYQ--PQPGGPGQYHSGPPSPTRGGGGYXXXGHPRSPSGSDRHRARGIHEGEAGGGGSRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSQPSHAEAAIAQMNGFQIGSKRLKVQHKRRGQSTDDPDDRDEGG 457
            DA+KLFVGQ+P+ MEE DLRP+ E FG ++D+ +IRDK+SG HRGCAF+T+C R +ADAAI  LH Q  L    NPLQVRPAEGQA   QE+KLF+GM PK A+E  IR VFA +G + EI+++R+   G +KGCAF+KY  R SA  AIEA +  YTM  G  PLVVKFAD++R   Q A  +   A+            A  W   PGG       P+    Q    ++     +G    GG  +PG     A    +++YY PY    A GY   P  GGP  +                   P  P  +          G +G   +   EGP GANLFIYHLP DL+DADLATAFAPFG V+SAKV++D+ +GESKGFGFVSY     A+AAIA MNGFQIGSKRLKVQHKR   + D+ DD  E G
Sbjct:   34 DAVKLFVGQVPRSMEEADLRPILEAFGPLYDIVIIRDKVSGAHRGCAFVTFCTRDAADAAIETLHNQVTLPMSSNPLQVRPAEGQAGASQEHKLFIGMIPKHADEASIREVFAPHGAIEEIYILRHPATGQSKGCAFLKYKDRHSASSAIEAFNGIYTMDRGTAPLVVKFADSRRQRIQRARNQAATAA------------AAYWQLPPGGT-----IPFPQIQQIQQQYMQQMQVFGAQALGGQTSPGGSPIPATNPATFMYYNPYAFAAASGYNSFPPAGGPAPF-------------------PLDPLATPMPGM-----GLSGARAATQLEGPAGANLFIYHLPHDLTDADLATAFAPFGTVISAKVFMDKNTGESKGFGFVSYDSVQAADAAIASMNGFQIGSKRLKVQHKRV-HNRDEYDDESESG 423

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BLAST of mRNA_P-littoralis_Contig7.268.1 vs. uniprot
Match: T0QG38_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QG38_SAPDV)

HSP 1 Score: 311 bits (798), Expect = 3.330e-98
Identity = 203/429 (47.32%), Postives = 258/429 (60.14%), Query Frame = 0

Query:   42 DAIKLFVGQIPKHMEEDDLRPVFEEFGEIFDLAVIRDKISGLHRGCAFLTYCARASADAAIAALHGQRRLERGQNPLQVRPAEGQA--EQENKLFVGMAPKSANEDEIRAVFASYGTLREIHVIRNQ-DGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGA-QAAAGRLGMASS------PGRHGSGPHPEAGGWMGQPGGGGQGAGYPYAMPAQAMSPHVMSGMPYGMPYGGAPAPGAPAQGSYVYYPYG---APGYQPQPGGPGQYHSGPPSPTRGGGGYXXXGHPRSPSGSDRHRARGIHEGEAGGGGSRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSQPSHAEAAIAQMNGFQIGSKRLKVQHKRRGQSTDDPDDRDEGG 457
            DA+KLFVGQ+P++MEE DLRP+ E FG ++D+ +IRDK+SG HRGCAF+T+C+R +A+AAI  LH Q  L    NPLQVRPAEGQA   QE+KLF+GM PK A+E  IR VFAS+G + EI+++R+   G +KGCAF+KY  R +A  AI+A +  YTM+ G  PLVVKFAD++R   Q A  +   A++      PG  G+ P P+            Q     Y    QA     ++G       G +P+P A       Y PY    A GY   P G     + PP P              + + +       +    +G   +   EGP GANLFIYHLP DL+DADLATAFAPFG V+SAKV++D+ +GESKGFGFVSY     A+AAIA MNGFQIGSKRLKVQHKR     DD  D DE G
Sbjct:   37 DAVKLFVGQVPRNMEEADLRPILEAFGPLYDIVIIRDKVSGTHRGCAFVTFCSRDAAEAAIETLHNQVTLPLSSNPLQVRPAEGQAGASQEHKLFIGMIPKHADESSIREVFASHGPIEEIYILRHPATGQSKGCAFLKYKDRHAASAAIDAYNGTYTMERGTAPLVVKFADSRRQRIQRARNQAATAAAAYWQLPPG--GTIPFPQL-----------QQIQQQYMQQMQAFGAQALAGQ---SSPGASPSPAANPAAFMYYNPYAFAAATGYPSFPTG-----AAPPFPLD------------ALASAVPSSVAAVAAASSGARAATQLEGPAGANLFIYHLPHDLTDADLATAFAPFGTVISAKVFMDKNTGESKGFGFVSYDSVQAADAAIASMNGFQIGSKRLKVQHKRV-HHRDDYGDDDESG 431

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BLAST of mRNA_P-littoralis_Contig7.268.1 vs. uniprot
Match: A0A024TU15_9STRA (Uncharacterized protein n=8 Tax=Aphanomyces TaxID=100860 RepID=A0A024TU15_9STRA)

HSP 1 Score: 306 bits (784), Expect = 5.450e-96
Identity = 197/419 (47.02%), Postives = 247/419 (58.95%), Query Frame = 0

Query:   42 DAIKLFVGQIPKHMEEDDLRPVFEEFGEIFDLAVIRDKISGLHRGCAFLTYCARASADAAIAALHGQRRLERGQNPLQVRPAEGQA--EQENKLFVGMAPKSANEDEIRAVFASYGTLREIHVIRNQD-GTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGAQAAAGRLGMASSPGRHGSGPHPEAGGWMGQPGGGGQGAGYPYAMPAQAMSPHVMSGMPYGM------PYGGAPAPG-----APAQGSYVYY-PYGAPGYQPQPGGPGQYHSGPPSPTRGGGGYXXXGHPRSPSGSDRHRARGIHEGEAGGGGSRPA---EGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSQPSHAEAAIAQMNGFQIGSKRLKVQHKR 442
            DA+KLFVGQ+P+ M+ED+LRP+ E FG ++D+ +IRDKISG HRGCAF+TYC+R +A+AAI  LH Q  L    NPLQVRPAEGQA   QE+KLF+GM PK A+E +IR+VF  +G + EI+++R+   G +KGCAF+K+  R +A  AI+ ++   TM  G  PLVVKFAD++R     A      S+           A  W   PG     A  P+    Q    ++     +G       P  G P P      A    +++YY PY  P               PP+    G GY     P  P G       G     A    +R A   EGP GANLFIYHLP DL+DADLATAFAPFG V+SAKVY+D+ +GESKGFGFVSY     A+AAIA MNGFQIGSKRLKVQHKR
Sbjct:   40 DAVKLFVGQVPRTMDEDELRPILERFGPLYDIVIIRDKISGAHRGCAFVTYCSRNAAEAAIDTLHNQVTLPSSPNPLQVRPAEGQAGASQEHKLFIGMIPKHADEADIRSVFQVHGDIEEIYILRHPGTGQSKGCAFLKFKDRHAASTAIDTINGAVTMDRGTAPLVVKFADSRRQRIQRARNQAATSA-----------AAYWQMPPG-----AAIPFPQLQQLQQQYLQQIQAFGAQAAALHPASGLPTPPQAPLTATNPAAFMYYNPYAMP---------------PPT----GAGYPSTAFPVVPIGG------GFPLDAASSDAARSAAQIEGPVGANLFIYHLPHDLTDADLATAFAPFGTVISAKVYMDKNTGESKGFGFVSYDSAQAADAAIASMNGFQIGSKRLKVQHKR 417

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig7.268.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig7.268.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FV60_ECTSI	1.000e-279	84.19	Trinucleotide repeat containing 4, isoform CRA_d n...	[more]
A0A836CBS7_9STRA	2.420e-112	51.06	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CK81_9STRA	5.420e-103	50.85	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A485KNC1_9STRA	6.010e-102	47.31	Aste57867_9466 protein n=1 Tax=Aphanomyces stellat...	[more]
A0A7S1BYN5_9STRA	1.080e-101	47.92	Hypothetical protein n=1 Tax=Corethron hystrix Tax...	[more]
W7U5L7_9STRA	2.400e-100	45.33	Rna binding protein n=3 Tax=Monodopsidaceae TaxID=...	[more]
A0A1V9ZMV5_9STRA	8.660e-100	48.49	CUG-BP-and ETR-3-like factor n=1 Tax=Achlya hypogy...	[more]
A0A1W0A7F0_9STRA	1.850e-98	47.69	CUG-BP-and ETR-3-like factor n=1 Tax=Thraustotheca...	[more]
T0QG38_SAPDV	3.330e-98	47.32	Uncharacterized protein n=1 Tax=Saprolegnia diclin...	[more]
A0A024TU15_9STRA	5.450e-96	47.02	Uncharacterized protein n=8 Tax=Aphanomyces TaxID=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 366..439 e-value: 1.4E-23 score: 94.3 coord: 132..207 e-value: 2.5E-19 score: 80.2 coord: 45..121 e-value: 1.3E-17 score: 74.5
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 46..108 e-value: 2.7E-12 score: 46.3 coord: 133..196 e-value: 7.8E-14 score: 51.3 coord: 367..437 e-value: 6.1E-18 score: 64.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 131..211 score: 16.3978
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 365..443 score: 18.120396
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 44..125 score: 15.749695
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 127..218 e-value: 1.6E-25 score: 91.0
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 348..473 e-value: 3.4E-27 score: 97.2
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 36..126 e-value: 2.3E-23 score: 84.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 304..366
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 442..458
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 436..483
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..247
None	No IPR available	PANTHER	PTHR24012:SF716	CUGBP ELAV-LIKE FAMILY MEMBER 6	coord: 31..214
None	No IPR available	PANTHER	PTHR24012	RNA BINDING PROTEIN	coord: 31..214
None	No IPR available	PANTHER	PTHR24012:SF716	CUGBP ELAV-LIKE FAMILY MEMBER 6	coord: 328..437
None	No IPR available	PANTHER	PTHR24012	RNA BINDING PROTEIN	coord: 328..437
None	No IPR available	CDD	cd12361	RRM1_2_CELF1-6_like	coord: 132..207 e-value: 4.16493E-35 score: 123.811
None	No IPR available	CDD	cd12362	RRM3_CELF1-6	coord: 367..439 e-value: 4.98142E-39 score: 134.301
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 28..126
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 129..443

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig7	contig	P-littoralis_Contig7:1037841..1040881 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig7.268.1	mRNA_P-littoralis_Contig7.268.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig7 1037841..1041433 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig7.268.1 ID=prot_P-littoralis_Contig7.268.1|Name=mRNA_P-littoralis_Contig7.268.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=483bp
MAQRSGDDELADRLGGINLEGLSGGEGKSSVGPAGLIHKDSDAIKLFVGQ
IPKHMEEDDLRPVFEEFGEIFDLAVIRDKISGLHRGCAFLTYCARASADA
AIAALHGQRRLERGQNPLQVRPAEGQAEQENKLFVGMAPKSANEDEIRAV
FASYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGG
PRPLVVKFADNKRGAQAAAGRLGMASSPGRHGSGPHPEAGGWMGQPGGGG
QGAGYPYAMPAQAMSPHVMSGMPYGMPYGGAPAPGAPAQGSYVYYPYGAP
GYQPQPGGPGQYHSGPPSPTRGGGGYGGGGHPRSPSGSDRHRARGIHEGE
AGGGGSRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDR
ASGESKGFGFVSYSQPSHAEAAIAQMNGFQIGSKRLKVQHKRRGQSTDDP
DDRDEGGGGPGYGEQAQGDFYPHPDYMGHQAGR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR035979	RBD_domain_sf