mRNA_P-littoralis_Contig1179.6.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1179.6.1
Unique NamemRNA_P-littoralis_Contig1179.6.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig1179.6.1 vs. uniprot
Match: A0A6H5JB61_9PHAE (RT_RNaseH_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB61_9PHAE)

HSP 1 Score: 305 bits (781), Expect = 9.170e-100
Identity = 144/205 (70.24%), Postives = 164/205 (80.00%), Query Frame = 1 
Query:    1 ELASKRARKFPITWGEEEDTAFNQLKSELASPTVLAFPDPNRPFELHTDASQVGSGAVLMQNMGGAPRVIAFASHRFSRTDARRGPTERECMGVLWAVQHFRPYVMGRKFTLVTDCSALTWLFRSRDLCPNLHRWALRLMEYDMTLEWRAGTNMALPDALSRLPHAPEPGADIDDSFSDDGTSASPEQFVGPRGPSLEGVLLADL 615
            + ASKRARK PI W E E+ AF+QL+  LASPTVLAFPDPN PFELH+DAS VG+GA L+Q +GG PR+IAFASH+FS TDARRGPTERECMGVLW V HF+PY+ GR+F +VTDCSALTWLFRS++LCP LHR ALRLMEYD+   WR G +  LPDALSRLP A  P  DIDDSF DD TS     FVGP+GP L+GV LADL
Sbjct:  116 DFASKRARKLPIQWEEAEEHAFHQLRQCLASPTVLAFPDPNAPFELHSDASSVGAGATLLQTIGGTPRIIAFASHKFSPTDARRGPTERECMGVLWGVDHFKPYLAGRQFRVVTDCSALTWLFRSKELCPKLHRGALRLMEYDIVFAWREGVHHVLPDALSRLPVASSPSVDIDDSFPDDFTSPDSATFVGPQGPVLDGVRLADL 320
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BLAST of mRNA_P-littoralis_Contig1179.6.1 vs. uniprot
Match: A0A6H5KBF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF4_9PHAE)

HSP 1 Score: 316 bits (809), Expect = 2.050e-96
Identity = 147/205 (71.71%), Postives = 168/205 (81.95%), Query Frame = 1 
Query:    1 ELASKRARKFPITWGEEEDTAFNQLKSELASPTVLAFPDPNRPFELHTDASQVGSGAVLMQNMGGAPRVIAFASHRFSRTDARRGPTERECMGVLWAVQHFRPYVMGRKFTLVTDCSALTWLFRSRDLCPNLHRWALRLMEYDMTLEWRAGTNMALPDALSRLPHAPEPGADIDDSFSDDGTSASPEQFVGPRGPSLEGVLLADL 615
            + ASKRARK PI WG+ E+ AF+ L+  LASPTVLAFPDPN PFELH+DAS VG+GA L+Q + G PR+IAFASH+FSRTDARRGPTERECMGVLW V HF+PY+ GR+F +VTDCSALTWLFRSR+LCP LHRWALRLMEYD+ LEWRAG +  LPDALSRLP A  P  D+DDSF DD TS     FVGP+GP L+GV LADL
Sbjct:  563 DFASKRARKLPIQWGQAEEHAFHHLRQCLASPTVLAFPDPNAPFELHSDASSVGAGATLLQTIDGTPRIIAFASHKFSRTDARRGPTERECMGVLWGVDHFKPYLAGRQFKVVTDCSALTWLFRSRELCPKLHRWALRLMEYDIGLEWRAGVHHVLPDALSRLPVASSPSVDVDDSFPDDFTSPDSATFVGPQGPVLDGVRLADL 767
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BLAST of mRNA_P-littoralis_Contig1179.6.1 vs. uniprot
Match: A0A6H5JZD5_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZD5_9PHAE)

HSP 1 Score: 293 bits (750), Expect = 1.080e-94
Identity = 156/264 (59.09%), Postives = 182/264 (68.94%), Query Frame = 1 
Query:    4 LASKRARKFPITWGEEEDTAFNQLKSELASPTVLAFPDPNRPFELHTDASQVGSGAVLMQNMGGAPRVIAFASHRFSRTDARRGPTERECMGVLWAVQHFRPYVMGRKFTLVTDCSALTWLFRSRDLCPNLHRWALRLMEYDMTLEWRAGTNMALPDALSRLPHAPEPGADIDDSFSDDGTSASPEQFVGPRGPSLEGVLLADLE---ANAIHDTDQTPAADVVHPITYSEHITALTSSFPFAACESLPAE--TPRRSRRLPYP 780
             ASKRARK PI W   E+ AF  L+  LASP VLAFPD  RPFELHTDAS +G GA LMQ + G  R +AFASHRFS+TDARRGPTERECMGVLWAV HFRPY+ GR+F LVTDCSALTWLFRSR+LCP LHRWALRLMEY+M LEW+AG    +PDALSRLP A     D+DDSF DD  S +    V   GP L+GV LA+L+    + + D D  P+   + P     H++AL  + PF AC ++  E   PRRS R   P
Sbjct:   19 FASKRARKLPIPWSVAEEDAFQSLRETLASPKVLAFPDLERPFELHTDASTLGVGASLMQTIDGVTRAVAFASHRFSQTDARRGPTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHRWALRLMEYEMELEWKAGVEYVVPDALSRLPVANPVEVDVDDSFPDD-LSCAAGAAVEILGPELKGVRLAELDPVQVDQVGDADSQPSH--LTPEGADFHLSAL-RALPFVACAAVDHEPDAPRRSGRTRTP 278
[Close]
BLAST of mRNA_P-littoralis_Contig1179.6.1 vs. uniprot
Match: A0A6H5KFK7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFK7_9PHAE)

HSP 1 Score: 296 bits (758), Expect = 9.140e-90
Identity = 159/266 (59.77%), Postives = 183/266 (68.80%), Query Frame = 1 
Query:    4 LASKRARKFPITWGEEEDTAFNQLKSELASPTVLAFPDPNRPFELHTDASQVGSGAVLMQNMGGAPRVIAFASHRFSRTDARRGPTERECMGVLWAVQHFRPYVMGRKFTLVTDCSALTWLFRSRDLCPNLHRWALRLMEYDMTLEWRAGTNMALPDALSRLPHAPEPGADIDDSFSDDGTSASPEQFVGPRGPSLEGVLLADLE---ANAIHDTDQTPAADVVHPITYSE--HITALTSSFPFAACESLPAE--TPRRSRRLPYP 780
             ASKRARK PI W   E+ AF  L+  LASP VLAFPD  RPFELHTDAS +G GA LMQ + G  R +AFASHRFS+TDARRGPTERECMGVLWAV HFRPY+ GR+F LVTDCSALTWLFRSR+LCP LHRWALRLMEYDM LEW+AG    +PDALSRLP A     D+DDSF DD  S +    V   GP L+GV LA+L+    + + D D  P+    HP       H++AL  + PFAAC ++  E   PRRS R   P
Sbjct:  420 FASKRARKLPIPWSVAEEDAFQSLRETLASPKVLAFPDLERPFELHTDASTLGVGASLMQTIDGVTRAVAFASHRFSQTDARRGPTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHRWALRLMEYDMELEWKAGVEHVVPDALSRLPVANPVEVDVDDSFPDD-LSCAAGAAVEILGPELKGVRLAELDPVQVDQVGDADSQPS----HPTPEGADFHLSAL-RALPFAACAAVDHEPDAPRRSDRTRTP 679
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BLAST of mRNA_P-littoralis_Contig1179.6.1 vs. uniprot
Match: A0A6H5KEH2_9PHAE (RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEH2_9PHAE)

HSP 1 Score: 296 bits (758), Expect = 5.760e-88
Identity = 159/266 (59.77%), Postives = 183/266 (68.80%), Query Frame = 1 
Query:    4 LASKRARKFPITWGEEEDTAFNQLKSELASPTVLAFPDPNRPFELHTDASQVGSGAVLMQNMGGAPRVIAFASHRFSRTDARRGPTERECMGVLWAVQHFRPYVMGRKFTLVTDCSALTWLFRSRDLCPNLHRWALRLMEYDMTLEWRAGTNMALPDALSRLPHAPEPGADIDDSFSDDGTSASPEQFVGPRGPSLEGVLLADLE---ANAIHDTDQTPAADVVHPITYSE--HITALTSSFPFAACESLPAE--TPRRSRRLPYP 780
             ASKRARK PI W   E+ AF  L+  LASP VLAFPD  RPFELHTDAS +G GA LMQ + G  R +AFASHRFS+TDARRGPTERECMGVLWAV HFRPY+ GR+F LVTDCSALTWLFRSR+LCP LHRWALRLMEYDM LEW+AG    +PDALSRLP A     D+DDSF DD  S +    V   GP L+GV LA+L+    + + D D  P+    HP       H++AL  + PFAAC ++  E   PRRS R   P
Sbjct:  942 FASKRARKLPIPWSVAEEDAFQSLRETLASPKVLAFPDLERPFELHTDASTLGVGASLMQTIDGVTRAVAFASHRFSQTDARRGPTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHRWALRLMEYDMELEWKAGVEHVVPDALSRLPVANPVEVDVDDSFPDD-LSCAAGAAVEILGPELKGVRLAELDPVQVDQVGDADSQPS----HPTPEGADFHLSAL-RALPFAACAAVDHEPDAPRRSGRTRTP 1201
[Close]
BLAST of mRNA_P-littoralis_Contig1179.6.1 vs. uniprot
Match: A0A6H5JQV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQV6_9PHAE)

HSP 1 Score: 283 bits (724), Expect = 2.220e-87
Identity = 142/216 (65.74%), Postives = 159/216 (73.61%), Query Frame = 1 
Query:    4 LASKRARKFPITWGEEEDTAFNQLKSELASPTVLAFPDPNRPFELHTDASQVGSGAVLMQNMGGAPRVIAFASHRFSRTDARRGPTERECMGVLWAVQHFRPYVMGRKFTLVTDCSALTWLFRSRDLCPNLHRWALRLMEYDMTLEWRAGTNMALPDALSRLPHAPEPGADIDDSFSDDGTSASPEQFVGPRGPSLEGVLLADLEANAIHDTDQTP 651
             ASKRARK PI W   E+ AF  L+  LASP VLAFPD  RPFELHTDAS +G GA LMQ + G  R +AFASHRFS+TDARRGPTERECMGVLWAV HFRPY+ GR+F LVTDCSALTWLFRSR+LCP LHRWALRLMEYDM LEW+AG    +PDALSRLP A     D+DDSF DD  S +    V   GP L+GV LA+L+   +   DQ P
Sbjct:  418 FASKRARKLPIPWSVAEEDAFQSLRETLASPKVLAFPDLERPFELHTDASTLGVGASLMQTIDGVTRAVAFASHRFSQTDARRGPTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHRWALRLMEYDMELEWKAGVEHVVPDALSRLPVANPVEVDVDDSFPDD-LSCAAGAAVQLLGPELKGVRLAELDPVQV---DQRP 629
[Close]
BLAST of mRNA_P-littoralis_Contig1179.6.1 vs. uniprot
Match: A0A6H5KIS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIS6_9PHAE)

HSP 1 Score: 265 bits (676), Expect = 1.650e-82
Identity = 126/179 (70.39%), Postives = 139/179 (77.65%), Query Frame = 1 
Query:    4 LASKRARKFPITWGEEEDTAFNQLKSELASPTVLAFPDPNRPFELHTDASQVGSGAVLMQNMGGAPRVIAFASHRFSRTDARRGPTERECMGVLWAVQHFRPYVMGRKFTLVTDCSALTWLFRSRDLCPNLHRWALRLMEYDMTLEWRAGTNMALPDALSRLPHAPEPGADIDDSFSDD 540
             ASKRARK PI W   E+ AF  L+  LASP VLAFPD  RPFELHTDAS +G GA LMQ + G  R +AFA+HRF +TDARRG TERECMGVLWAV HFRPY+ GR+F LVTDCSALTWLFRSR+LCP LHRWALRLMEYDM LEW+AG    +PDALSRLP A     D+DDSF DD
Sbjct:  278 FASKRARKLPIPWSVAEEDAFQSLRETLASPKVLAFPDLERPFELHTDASTLGVGASLMQTIDGVTRAVAFANHRFLQTDARRGLTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHRWALRLMEYDMELEWKAGVEHVVPDALSRLPVANPVEVDVDDSFPDD 456
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BLAST of mRNA_P-littoralis_Contig1179.6.1 vs. uniprot
Match: A0A6H5JIH2_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIH2_9PHAE)

HSP 1 Score: 256 bits (653), Expect = 7.280e-81
Identity = 120/165 (72.73%), Postives = 132/165 (80.00%), Query Frame = 1 
Query:    4 LASKRARKFPITWGEEEDTAFNQLKSELASPTVLAFPDPNRPFELHTDASQVGSGAVLMQNMGGAPRVIAFASHRFSRTDARRGPTERECMGVLWAVQHFRPYVMGRKFTLVTDCSALTWLFRSRDLCPNLHRWALRLMEYDMTLEWRAGTNMALPDALSRLPHA 498
             ASKRARK PI W   E+ AF  L+  LASP VLAFPD  RPFELHTDAS +G GA LMQ + G  R +AFASHRFS+TDARRG TERECMGVLWAV HFRPY+ GR+F LVTDCSALTWLFRSR+LCP LHRWALRLMEYD+ LEW+AG    +PDALSRLP A
Sbjct:  146 FASKRARKLPIQWSAAEEDAFQYLRETLASPKVLAFPDLERPFELHTDASTLGVGASLMQTIDGVTRAVAFASHRFSQTDARRGHTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPTLHRWALRLMEYDLELEWKAGVEHVVPDALSRLPVA 310
[Close]
BLAST of mRNA_P-littoralis_Contig1179.6.1 vs. uniprot
Match: A0A6H5JIE2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIE2_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 2.120e-77
Identity = 142/248 (57.26%), Postives = 165/248 (66.53%), Query Frame = 1 
Query:   52 EDTAFNQLKSELASPTVLAFPDPNRPFELHTDASQVGSGAVLMQNMGGAPRVIAFASHRFSRTDARRGPTERECMGVLWAVQHFRPYVMGRKFTLVTDCSALTWLFRSRDLCPNLHRWALRLMEYDMTLEWRAGTNMALPDALSRLPHAPEPGADIDDSFSDDGTSASPEQFVGPRGPSLEGVLLADLEANAIH---DTDQTPAADVVHPITYSEHITALTSSFPFAACESLPAE--TPRRSRRLPYP 780
            ED AF   +  LASPTVLAFPD  RPFELHTDAS +G GA L Q + GA R +AFASHRF +TDARRGPTERE MGVLWAV HFRP +  R+F LVTDCSALTWLFRSR+LCP LHRWALRLMEYDM LEW+AG    +PDALS LP       D DDSF DD +S +    V   GP L+GV LA+L+   +    D D  P+     P   + H++AL  + PFAAC ++  E    RRS R   P
Sbjct:  194 EDDAFQSFRETLASPTVLAFPDLERPFELHTDASTLGVGASLTQTIDGATRAVAFASHRFWQTDARRGPTEREGMGVLWAVDHFRPCLACRRFKLVTDCSALTWLFRSRELCPKLHRWALRLMEYDMELEWKAGVEHVVPDALSWLPVTCPVEVDADDSFPDDLSSTAAGASVEIVGPDLDGVRLAELDPVQVDRGGDADSQPSHPT--PEMTNFHLSAL-RALPFAACAAVDPERDAARRSGRTRTP 438
[Close]
BLAST of mRNA_P-littoralis_Contig1179.6.1 vs. uniprot
Match: A0A6H5K9Z4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Z4_9PHAE)

HSP 1 Score: 238 bits (608), Expect = 1.670e-71
Identity = 135/284 (47.54%), Postives = 150/284 (52.82%), Query Frame = 1 
Query:    4 LASKRARKFPITWGEEEDTAFNQLKSELASPTVLAFPDPNRPFELHTDASQVGSGAVLMQNMGGAPRVIAFASHRFSRTDARRGPTERECMGVLWAVQHFRPYVMGRKFTLVTDCSALTWLFRSRDLCPNLH-----------------------------------------------------------------------------------RWALRLMEYDMTLEWRAGTNMALPDALSRLPHAPEPGADIDDSFSDDGTSASPEQFVGPRGPSLEGVLL 606
             ASKRARK PI W   E+ AF  L+  LASP VLAFPD  RPFELHTDAS +G GA LMQ + G  R +AFASHRFS+TDARRGPTERECMGVLWAV HFRPY+ GR+F LVTDCSALTWLFRSR+LCP LH                                                                                   RWALRLMEYDM LEW+A     +PDALSRLP A     D+DDSF DD  S +    V   GP L+G +L
Sbjct:  234 FASKRARKLPIPWSVAEEDAFQSLRETLASPKVLAFPDLERPFELHTDASTLGVGASLMQTIDGVTRAVAFASHRFSQTDARRGPTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHSTLGVGASLMQTIDGVTRAVAFASHRFSQTDARRGPTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHRWALRLMEYDMELEWKAEVEHVVPDALSRLPVANPVEVDVDDSFPDD-VSRAAGAAVEIVGPELKGAML 516
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1179.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JB61_9PHAE9.170e-10070.24RT_RNaseH_2 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5KBF4_9PHAE2.050e-9671.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZD5_9PHAE1.080e-9459.09RT_RNaseH domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KFK7_9PHAE9.140e-9059.77Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KEH2_9PHAE5.760e-8859.77RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp.... [more]
A0A6H5JQV6_9PHAE2.220e-8765.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIS6_9PHAE1.650e-8270.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JIH2_9PHAE7.280e-8172.73Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JIE2_9PHAE2.120e-7757.26Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K9Z4_9PHAE1.670e-7147.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1179contigP-littoralis_Contig1179:40344..44492 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog164328.Phyra78393
PFAMsRetrotrans_gag,rve,zf-CCHC
Model size853
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons2
Evalue4.43e-37
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,3QH6E@4776|Peronosporales
Descriptiontransposition, RNA-mediated
Cds size852
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789492.7973907-CDS-P-littoralis_Contig1179:40343..411151680789492.7973907-CDS-P-littoralis_Contig1179:40343..41115Pylaiella littoralis U1_48CDSP-littoralis_Contig1179 40344..41115 +
1680789492.8075771-CDS-P-littoralis_Contig1179:44411..444911680789492.8075771-CDS-P-littoralis_Contig1179:44411..44491Pylaiella littoralis U1_48CDSP-littoralis_Contig1179 44412..44491 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1179.6.1prot_P-littoralis_Contig1179.6.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1179 40344..44491 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1179.6.1

>prot_P-littoralis_Contig1179.6.1 ID=prot_P-littoralis_Contig1179.6.1|Name=mRNA_P-littoralis_Contig1179.6.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=284bp
ELASKRARKFPITWGEEEDTAFNQLKSELASPTVLAFPDPNRPFELHTDA
SQVGSGAVLMQNMGGAPRVIAFASHRFSRTDARRGPTERECMGVLWAVQH
FRPYVMGRKFTLVTDCSALTWLFRSRDLCPNLHRWALRLMEYDMTLEWRA
GTNMALPDALSRLPHAPEPGADIDDSFSDDGTSASPEQFVGPRGPSLEGV
LLADLEANAIHDTDQTPAADVVHPITYSEHITALTSSFPFAACESLPAET
PRRSRRLPYPLCSTEASESVSVASTLDLPHVSPS
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mRNA from alignment at P-littoralis_Contig1179:40344..44492+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1179.6.1 ID=mRNA_P-littoralis_Contig1179.6.1|Name=mRNA_P-littoralis_Contig1179.6.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4149bp|location=Sequence derived from alignment at P-littoralis_Contig1179:40344..44492+ (Pylaiella littoralis U1_48)
GAGCTTGCTTCGAAACGAGCCCGCAAGTTTCCAATAACCTGGGGAGAAGA
AGAGGACACAGCTTTCAATCAGCTCAAGTCCGAGTTAGCTTCACCCACTG
TACTTGCTTTCCCAGACCCGAACCGCCCTTTCGAGCTTCATACCGATGCA
AGTCAAGTAGGATCTGGAGCTGTGCTCATGCAAAACATGGGGGGCGCTCC
GCGTGTAATTGCCTTCGCTAGCCATCGATTTTCCCGTACAGACGCACGCA
GAGGTCCAACGGAGCGAGAATGTATGGGGGTGCTTTGGGCAGTGCAGCAT
TTCCGACCCTACGTGATGGGGAGAAAATTTACGCTAGTCACAGATTGCTC
GGCACTCACATGGTTATTTCGCAGCCGAGATCTATGCCCCAACCTGCACA
GATGGGCGCTACGTTTGATGGAATACGATATGACTTTGGAATGGCGCGCA
GGTACCAACATGGCCCTGCCAGATGCATTGTCACGCCTTCCCCATGCCCC
CGAACCCGGTGCCGATATCGACGACTCGTTCTCAGATGACGGCACCTCCG
CATCACCGGAGCAGTTTGTTGGGCCTAGAGGACCAAGTTTAGAGGGAGTT
TTGTTAGCTGATTTGGAGGCGAACGCCATACATGACACCGACCAAACCCC
TGCCGCCGACGTCGTTCACCCTATCACATACAGCGAGCATATAACAGCCC
TCACTTCAAGTTTTCCCTTCGCCGCATGTGAAAGCCTTCCTGCAGAAACA
CCGCGTCGTTCGCGTCGCTTGCGTATGAAATATATATTGGGTGTCCTCGT
AGCATAGTATGATGGATGCTGGATGGATGTCTATTTACTACGTAGATTGC
AGCCGGTAGGGTACGACATTCGGGGAAGTTTCTGGGTAGTTTCCCCGGAG
TATCTTGGCATGATGGGAGATTCGGTTCATTGGATTTGGCGACGGAGAGA
TTCCGTGATGGATGTACCACATCCACGTCACTCTGCTTTTGGTCTCTGCT
TTTGGACTCTGCTTTTGTCTCTGCTTTGATACTCTTCATCTTGTCCGGTG
TTTGTTTCCTCCAAGGTCAATAATATAACGAGCGTTTCCTACCTCGGCCT
GTGTGGCCGAGGTGCCCTCATCTCCACCCAACCCCAAGCTTAGCTTAGCC
CCAGTATCGAACACGCTAGCGAAGACACGTCGTCCACGATATGCGGGTCT
AGCTTTGCCAGTTGGGGATTCATTTCGCAGTGAGGGCGACGGAATTTTCA
AGATGATCATGAACAGCATGGACAAGAGGAAGACCACAACACGGCAGCAG
CCGATGTTCAAGCAGCAACAGCAGCAACAGCAGCACGCCGCCTACTAGGG
TCCTAGACCCGCTCAGGCACGTGACGACATGCTCATGTTTTTCATCTGCC
CGGCTTTGACTTGGACTTGTTGTTTTGTCTTTTCAGAAGCTATGATTCTG
GATTCGGATTTGGTCTTGCCCTTTGGTTCATGTTCTGACCTTTGGTCACT
GATTGTTATTTTTCGGTCATGACTGCTGTACGATCTGACATGACATTCGT
AAACGAAGTACGAATTGGGATGTTCAAGTGAATGAGGATACGAAGAAATA
AGTGTGTGTGTAATGGTTTTCAAGCCAACAAAATCACTGCGGTGGGGATC
TGCCGGCATTGGAACGGTTGCCAGTATACGATCAAAACTGACAGAAACGA
GATGTAGTGGGAATTTCATCGTACAGTGAGAGATCATAGCAAGTTTGTAA
GAGGGTGGGTGAAAATTGACGGTAGAGAACTGCAGTTTACCGAAACAGGA
CCTCAGCTAAAAGCGAGACTTCACTTTATATTATTTACAGAAGAATCGGT
CGCGGGTTAAACCCCCGCCATGCACTATTGCGCTTATTACATTCCACCAG
AGCAAAACTGGGAACTCGGGGAAGCAAAAGCAGCAAAGGTATGACCTCTC
TGCATCAGATAAACTGGGAACTGAGTAGACGAGTCACCGTAATACTTTTC
GATTTTTTTAATAATCAGCAAGAAGCGAGGCATGGTTCTCAAACGAGTTC
CCCGACAAACATAGGTCCCAAACCATAGCAATGGCAGACCACGAATAAAC
TTTGATTTCATCACCAAGAGAGAACTTCCGATTTTTTTTCCTTTTTGCAG
TCATATTTATACTGTGCAAAACCGGCGGGGGGTATGATAGAAGAATTGGT
AGTGTATGATTTTCCCCGGTAAAAGGACGTACTGTAGTGATGCTGATTTT
ATGGCGCCCTGATTAATTTATTTTGTTGTGTCAACTGATTTTTGTGGGAT
GTGTGATTCCAAGAAACTAATCGTGCCACCATCATTCCTCCGAACGCGCG
CGGGCTGCCCCTTCATCGCCGAGTCAATCCCCCGGGAGCGACAGTTGTGC
TCACCCCACCCGTAGGCGGACAAAAATCTCACCAGCTCGAGCCGCGGCCA
GCCGGACGAACGAAAAGCGAAAGGTGGCCGCAGCAGAGGCGAGCGTGAAC
CGCGGGGGGGCGGAGAAACAATGGCTTGGGCAACGGACAAAAGCGCTGGG
TTTGATTTCAAGGCAAAAACGTACGTAGGAAAGATTTGTTTTGAATTTGA
TTGATTTGTGGATTTGGATTTTTAGGCTTGTTTTGATTTTCGGATTTTGA
AGGATAAGGGTTTATTTGGTTGTTTAGTTCTGCAGGATTTTTTCCATCTT
TGAATTTTCATATGATATTTCGCGTTTTACCTGCGAAAAGTAGTACTCGT
CGGGCCGTACACCGTCATATTACAAATTATTTTGCCAGTATTGGTCCGGA
AGGGCTTGATGGACCGTTCGTACTTTTTCATCGTCCCGTCTTCGAGTGTT
GCGTCTTTGCGCGAACTTTTGTGATGTTGCGTTGGATAATTTCTTTTTTC
TTTCAGGGACTGCTTTGGAATTAAATGTAAGGCAACTGCTGATCAACTGC
TCCGAAAAATCATGGGGGGGTTGATGTGGATCTTGACATGGGGGGGTTGA
TGTGGATCTTGACATGATTTCTCTCATAGCTAGTCACAGCAGTTGGTACA
GGGAATAATTTGTTTGCAAATGAGGCACCTGACCGCGTTTTCATGCTGCA
ATAATTTAAATTTGAAGGTTGTTGTAGGATCTTTTCCTAATTTTAGGTTC
AGGTTCGTTCCGGGACGCTACGACGGCAGGGGGGCCGTAAGCAGGTGAAT
CTGACATGATGAAGTAACTCTGTTCTTTATAAAATGAAATGGAGATTTCC
TTTCATCTCAAAATAACATGATGGCGGGAAGTCTATGAAAATCTCCGATT
TGTTTACTTTGTTTTCAGTTTGTTTATTTCGTGCGGCATGTGATGGTGCT
TCGTCCACCACTGATATTTTTGCGTTGGATTCTGTTTTTCTCGTACAATA
ATAGTCGATAAATGATGGTCACTTGGAAAATTGATGGTTGGTGAGTTTTC
TAGTACTAGTGCCGTTTGTATTTCGATGTCGCAGGAGGGAGTCATTTCTG
GAAAGAAGAGGCGTTGTTTGTATTATGTGAGATTCGGAAATTCACACATG
ATCCGCCGTTTTACCTGGTGTGGTTCATGGGATATAACAATGAGTGATTT
AATGTTTCGTAGATATTGGGGTGCAGCGTAGAAATGTTTTGATGTGCCGT
ATCATTACGATGCATACGAGCAGGGGGGCTGAAAGATATATTGGGTGTCC
TCGTAGCATAGTATGATGGATGCTGGATGGATGTCTATTTACTACGTAGA
TTGCAGCCGGTAGGGTACGACATTCGGGGAAGTTTCTGGGTAGTTTCCCC
GGAGTATCTTGGCATGATGGGAGATTCGGTTCATTGGATTTGGCGACGGA
GAGATTCCGTGATGGATGTACCACATCCACGTCACTCTGCTTTTGGTCTC
TGCTTTTGGACTCTGCTTTTGTCTCTGCTTTGATACTCTTCATCTTGTTC
GGTGTTTGTTTCCTCCAAGGTCAATAATATAACGAGCGTTTCCTACCTCG
GCCTGTGCGGCCGAGGTGCCCTCATCTCCACCCAACCCCAAGCTTAGCTT
AGCCCCAGTATGAAACAGCGTACCCCCTCTGTTCGACTGAAGCCTCTGAA
TCAGTTTCCGTCGCCAGTACCCTTGATTTACCCCACGTCAGCCCAAGCT
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Coding sequence (CDS) from alignment at P-littoralis_Contig1179:40344..44492+

>mRNA_P-littoralis_Contig1179.6.1 ID=mRNA_P-littoralis_Contig1179.6.1|Name=mRNA_P-littoralis_Contig1179.6.1|organism=Pylaiella littoralis U1_48|type=CDS|length=852bp|location=Sequence derived from alignment at P-littoralis_Contig1179:40344..44492+ (Pylaiella littoralis U1_48)
GAGCTTGCTTCGAAACGAGCCCGCAAGTTTCCAATAACCTGGGGAGAAGA
AGAGGACACAGCTTTCAATCAGCTCAAGTCCGAGTTAGCTTCACCCACTG
TACTTGCTTTCCCAGACCCGAACCGCCCTTTCGAGCTTCATACCGATGCA
AGTCAAGTAGGATCTGGAGCTGTGCTCATGCAAAACATGGGGGGCGCTCC
GCGTGTAATTGCCTTCGCTAGCCATCGATTTTCCCGTACAGACGCACGCA
GAGGTCCAACGGAGCGAGAATGTATGGGGGTGCTTTGGGCAGTGCAGCAT
TTCCGACCCTACGTGATGGGGAGAAAATTTACGCTAGTCACAGATTGCTC
GGCACTCACATGGTTATTTCGCAGCCGAGATCTATGCCCCAACCTGCACA
GATGGGCGCTACGTTTGATGGAATACGATATGACTTTGGAATGGCGCGCA
GGTACCAACATGGCCCTGCCAGATGCATTGTCACGCCTTCCCCATGCCCC
CGAACCCGGTGCCGATATCGACGACTCGTTCTCAGATGACGGCACCTCCG
CATCACCGGAGCAGTTTGTTGGGCCTAGAGGACCAAGTTTAGAGGGAGTT
TTGTTAGCTGATTTGGAGGCGAACGCCATACATGACACCGACCAAACCCC
TGCCGCCGACGTCGTTCACCCTATCACATACAGCGAGCATATAACAGCCC
TCACTTCAAGTTTTCCCTTCGCCGCATGTGAAAGCCTTCCTGCAGAAACA
CCGCGTCGTTCGCGTCGCTTGCCGTACCCCCTCTGTTCGACTGAAGCCTC
TGAATCAGTTTCCGTCGCCAGTACCCTTGATTTACCCCACGTCAGCCCAA
GC
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