mRNA_P-littoralis_Contig7.247.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig7.247.1 vs. uniprot
Match: A0A6H5JUX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX0_9PHAE) HSP 1 Score: 134 bits (337), Expect = 2.460e-34 Identity = 74/126 (58.73%), Postives = 93/126 (73.81%), Query Frame = 2
Query: 2 DRHVSQTSVADKFGCSVRKVCNIIKKRAEVEEKAATAGLGGKKTSRQGDFPEVDRMALDLFAKAREARIAVTRDVIRSFGRSAKATLLATATTSAALRNKLEDFQAGEKWAKNLVRRNGLHSQRLH 379
D VSQ +AD+FGCS R V R +VE A AG G +KT+R+GDFPEVD +AL L AKAR+A++ VTRDV+RSFGR+A+ TLLA TSAA+R ++EDF+AGEKW KN V+RN + S RLH
Sbjct: 104 DAKVSQVQIADRFGCSERFVRTGKADRKKVEA-ATPAGGGTQKTARKGDFPEVDAIALYLLAKARKAKMPVTRDVLRSFGRTARTTLLADTATSAAVRARVEDFKAGEKWTKNFVKRNNIQSVRLH 228
BLAST of mRNA_P-littoralis_Contig7.247.1 vs. uniprot
Match: A0A6H5JQU7_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQU7_9PHAE) HSP 1 Score: 137 bits (344), Expect = 7.930e-34 Identity = 72/126 (57.14%), Postives = 95/126 (75.40%), Query Frame = 2
Query: 2 DRHVSQTSVADKFGCSVRKVCNIIKKRAEVEEKAATAGLGGKKTSRQGDFPEVDRMALDLFAKAREARIAVTRDVIRSFGRSAKATLLATATTSAALRNKLEDFQAGEKWAKNLVRRNGLHSQRLH 379
D+ VS +AD+F CS+R + + R +VE A AG G +K +R+GDFPEVD +ALDL KAR+A++ VTRDV+RSFGRSA+ATLLA TSAA+R ++EDF+AGE+WAKN V+RN + S RLH
Sbjct: 105 DQKVSHAQIADRFTCSLRFIGTVKAGRQKVEI-ATAAGCGSQKAARKGDFPEVDEIALDLLDKARKAKMPVTRDVLRSFGRSARATLLADIATSAAVRERVEDFKAGERWAKNFVKRNKIQSVRLH 229
BLAST of mRNA_P-littoralis_Contig7.247.1 vs. uniprot
Match: A0A6H5KD82_9PHAE (HTH CENPB-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD82_9PHAE) HSP 1 Score: 135 bits (341), Expect = 3.040e-33 Identity = 72/126 (57.14%), Postives = 94/126 (74.60%), Query Frame = 2
Query: 2 DRHVSQTSVADKFGCSVRKVCNIIKKRAEVEEKAATAGLGGKKTSRQGDFPEVDRMALDLFAKAREARIAVTRDVIRSFGRSAKATLLATATTSAALRNKLEDFQAGEKWAKNLVRRNGLHSQRLH 379
D+ VS +AD+F CS+R + R +VE A AG G +K +R+GDFPEVD +ALDL KAR+A++ VTRDV+RSFGRSA+ATLLA TSAA+R ++EDF+AGE+WAKN V+RN + S RLH
Sbjct: 105 DQKVSHAQIADRFKCSLRFIGTANAGRQKVET-ATAAGCGSQKIARKGDFPEVDEIALDLLDKARKAKMPVTRDVLRSFGRSARATLLAGTATSAAVRERVEDFKAGERWAKNFVKRNQIQSVRLH 229
BLAST of mRNA_P-littoralis_Contig7.247.1 vs. uniprot
Match: A0A6H5JH32_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH32_9PHAE) HSP 1 Score: 135 bits (340), Expect = 3.080e-33 Identity = 71/126 (56.35%), Postives = 92/126 (73.02%), Query Frame = 2
Query: 2 DRHVSQTSVADKFGCSVRKVCNIIKKRAEVEEKAATAGLGGKKTSRQGDFPEVDRMALDLFAKAREARIAVTRDVIRSFGRSAKATLLATATTSAALRNKLEDFQAGEKWAKNLVRRNGLHSQRLH 379
D+ S +AD+F CS+R + + R + E A AG G +KT+R+GDFPEVD +ALDL KAR+A + VTRDV+RSFGRSA+ATLLA TSAA+R +EDF+AGE+WAKN V+RN + S RLH
Sbjct: 3 DQKASHAQIADRFKCSLRFMGTVKTGREKKVETAIAAGCGSQKTARKGDFPEVDEIALDLLEKARKAIMPVTRDVLRSFGRSARATLLADTATSAAVREGVEDFKAGERWAKNFVKRNKIQSVRLH 128
BLAST of mRNA_P-littoralis_Contig7.247.1 vs. uniprot
Match: A0A6H5JWL9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWL9_9PHAE) HSP 1 Score: 134 bits (336), Expect = 8.500e-33 Identity = 72/126 (57.14%), Postives = 91/126 (72.22%), Query Frame = 2
Query: 2 DRHVSQTSVADKFGCSVRKVCNIIKKRAEVEEKAATAGLGGKKTSRQGDFPEVDRMALDLFAKAREARIAVTRDVIRSFGRSAKATLLATATTSAALRNKLEDFQAGEKWAKNLVRRNGLHSQRLH 379
D VS VAD+F CSVR + + R +E AA AG G +K +R+GDFPEVD+++LDL KAR+A+I VTRDV RSFGRSA+ TLLA TS A+R ++EDF+AGEKWAK V+RN + S RLH
Sbjct: 44 DAKVSYVQVADRFSCSVRFLATVRSDRKAIEA-AAAAGNGCQKNARKGDFPEVDKISLDLLEKARQAKIPVTRDVFRSFGRSARVTLLADPATSEAVRARVEDFKAGEKWAKKFVKRNKIQSVRLH 168
BLAST of mRNA_P-littoralis_Contig7.247.1 vs. uniprot
Match: A0A6H5J7S2_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7S2_9PHAE) HSP 1 Score: 132 bits (332), Expect = 6.420e-32 Identity = 69/126 (54.76%), Postives = 93/126 (73.81%), Query Frame = 2
Query: 2 DRHVSQTSVADKFGCSVRKVCNIIKKRAEVEEKAATAGLGGKKTSRQGDFPEVDRMALDLFAKAREARIAVTRDVIRSFGRSAKATLLATATTSAALRNKLEDFQAGEKWAKNLVRRNGLHSQRLH 379
D+ VS +AD+F C +R + + R +VE A AG +KT+R+GDFPEVD +ALDL KAR+A++ VTRDV+RSFGRS +ATLLA TSAA+R ++EDF+AG++WAKN V+RN + S RLH
Sbjct: 105 DQKVSHAQIADRFKCLLRFIGTVKAGRQKVET-ATAAGCSSQKTARKGDFPEVDEIALDLLDKARKAKMPVTRDVLRSFGRSTRATLLADTATSAAVRERVEDFKAGKRWAKNFVKRNKIQSVRLH 229
BLAST of mRNA_P-littoralis_Contig7.247.1 vs. uniprot
Match: A0A6H5J8J7_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8J7_9PHAE) HSP 1 Score: 118 bits (296), Expect = 9.700e-29 Identity = 63/126 (50.00%), Postives = 88/126 (69.84%), Query Frame = 2
Query: 2 DRHVSQTSVADKFGCSVRKVCNIIKKRAEVEEKAATAGLGGKKTSRQGDFPEVDRMALDLFAKAREARIAVTRDVIRSFGRSAKATLLATATTSAALRNKLEDFQAGEKWAKNLVRRNGLHSQRLH 379
D+ V+ +AD+F CS R V ++ K R + E +AA G KK R G+ PEVD +ALDL KAR+ ++ VTRDV+RSFGR+A+ATLLA S ++ ++EDF+AGE+WA+N V+RN + S RLH
Sbjct: 6 DQKVTHEQLADRFKCSERLVRDVKKNRKKYETEAAAGRGGSKKNVRTGNNPEVDAIALDLLEKARKTKMPVTRDVLRSFGRAARATLLADPAASKEVKARVEDFKAGERWARNFVKRNIIDSVRLH 131
BLAST of mRNA_P-littoralis_Contig7.247.1 vs. uniprot
Match: A0A6H5LCM9_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCM9_9PHAE) HSP 1 Score: 121 bits (303), Expect = 5.660e-28 Identity = 62/126 (49.21%), Postives = 88/126 (69.84%), Query Frame = 2
Query: 2 DRHVSQTSVADKFGCSVRKVCNIIKKRAEVEEKAATAGLGGKKTSRQGDFPEVDRMALDLFAKAREARIAVTRDVIRSFGRSAKATLLATATTSAALRNKLEDFQAGEKWAKNLVRRNGLHSQRLH 379
D V+ +AD+F CSVR V N+ K R + E +AA KK+ R+GDFP V+ +ALDL KAR+A++ VTR+V+RSFGRSA+ATLL S ++ +++DF+AGE+WA+N V+RN + S R H
Sbjct: 71 DAKVTHEQIADRFACSVRLVRNVKKNRQKHEAEAAXXXXXSKKSLRKGDFPAVEAIALDLLEKARKAKMPVTREVLRSFGRSARATLLGDPAASKEVKARVQDFKAGERWAQNFVKRNNIQSARPH 196
BLAST of mRNA_P-littoralis_Contig7.247.1 vs. uniprot
Match: A0A6H5L4D9_9PHAE (DDE-1 domain-containing protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4D9_9PHAE) HSP 1 Score: 120 bits (300), Expect = 1.130e-27 Identity = 63/126 (50.00%), Postives = 88/126 (69.84%), Query Frame = 2
Query: 2 DRHVSQTSVADKFGCSVRKVCNIIKKRAEVEEKAATAGLGGKKTSRQGDFPEVDRMALDLFAKAREARIAVTRDVIRSFGRSAKATLLATATTSAALRNKLEDFQAGEKWAKNLVRRNGLHSQRLH 379
D+ V+ +AD+F CS R V ++ K R + E +AA G KK R G+ PEVD +ALDL KAR+ ++ VTRDV+RSFGR+A+ATLLA S ++ ++EDF+AGE+WA+N V+RN + S RLH
Sbjct: 6 DQKVTHEQLADRFKCSERLVRDVKKNRKKYETEAAAGRGGSKKNVRTGNNPEVDAIALDLLEKARKTKMPVTRDVLRSFGRAARATLLADPAASKEVKARVEDFKAGERWARNFVKRNSIDSVRLH 131
BLAST of mRNA_P-littoralis_Contig7.247.1 vs. uniprot
Match: A0A6H5K1E5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1E5_9PHAE) HSP 1 Score: 117 bits (292), Expect = 1.910e-26 Identity = 63/97 (64.95%), Postives = 80/97 (82.47%), Query Frame = 2
Query: 80 RAEVEEKAATAGLGG-KKTSRQGDFPEVDRMALDLFAKAREARIAVTRDVIRSFGRSAKATLLATATTSAALRNKLEDFQAGEKWAKNLVRRNGLHS 367
R +VE AATA +GG +KT+R+GDFPEVD +AL L AKAR+A++ V RDV+RSFGRSA+ TLLA TSAA+R ++EDF+AGEKWAKN V+RN +HS
Sbjct: 110 RKKVE--AATAAVGGIQKTARKGDFPEVDAIALYLLAKARKAKMPVIRDVLRSFGRSARTTLLADTATSAAVRARIEDFKAGEKWAKNFVKRNNIHS 204 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig7.247.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig7.247.1 >prot_P-littoralis_Contig7.247.1 ID=prot_P-littoralis_Contig7.247.1|Name=mRNA_P-littoralis_Contig7.247.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=135bp MALDLFAKAREARIAVTRDVIRSFGRSAKATLLATATTSAALRNKLEDFQback to top mRNA from alignment at P-littoralis_Contig7:974791..976017- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig7.247.1 ID=mRNA_P-littoralis_Contig7.247.1|Name=mRNA_P-littoralis_Contig7.247.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1227bp|location=Sequence derived from alignment at P-littoralis_Contig7:974791..976017- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig7:974791..976017- >mRNA_P-littoralis_Contig7.247.1 ID=mRNA_P-littoralis_Contig7.247.1|Name=mRNA_P-littoralis_Contig7.247.1|organism=Pylaiella littoralis U1_48|type=CDS|length=405bp|location=Sequence derived from alignment at P-littoralis_Contig7:974791..976017- (Pylaiella littoralis U1_48)back to top |