mRNA_P-littoralis_Contig1179.4.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1179.4.1 vs. uniprot
Match: D7G2E5_ECTSI (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2E5_ECTSI) HSP 1 Score: 358 bits (919), Expect = 4.120e-121 Identity = 155/203 (76.35%), Postives = 181/203 (89.16%), Query Frame = 1
Query: 136 MWFWAHVGFIHTLGRLALDDTPTHLPTRDIFEFLSAQDCVNFLRFTRSQIILMMELLCVPDRIRTECGYVLSGRTALCILLYRMAFPCRYKDMRVIFHLPDSLLCEAFNYMLHFMDETWGPLLTLDIGRLVPQLEVFVEALQAWGCPLPNCWAFIDGTVRAICRPKRNQRAYFNGHKRFHAIKFQAIVTPDGMVVDLFGPELG 744
MWFWAH+GFI+T+GRL +DDT T LP RDIF FLSAQDC+NFLRF+R QII+ ++ LCVPD IRT+CGYV++GRTALC+LLYR+AFPCRYKDMR+IFH DS LCE FNYMLHFM+ETWG +LTLD+GRLVP+L+ F E LQ WGCPLPNCWAFIDGTVRAICR R QRA+FNGHKR+HAIK Q++VTPDG++VDLFGPELG
Sbjct: 1 MWFWAHIGFIYTVGRLPIDDTATPLPARDIFTFLSAQDCINFLRFSREQIIITVQHLCVPDMIRTDCGYVIAGRTALCVLLYRLAFPCRYKDMRLIFHRSDSCLCETFNYMLHFMNETWGSMLTLDLGRLVPRLDFFAERLQTWGCPLPNCWAFIDGTVRAICRTIREQRAFFNGHKRYHAIKLQSVVTPDGIMVDLFGPELG 203
BLAST of mRNA_P-littoralis_Contig1179.4.1 vs. uniprot
Match: A0A6H5L0K5_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0K5_9PHAE) HSP 1 Score: 299 bits (766), Expect = 6.500e-99 Identity = 138/230 (60.00%), Postives = 176/230 (76.52%), Query Frame = 1
Query: 55 RLKERIARKNRALAFLQLRTAAALHSQMWFWAHVGFIHTLGRLALDDTPTHLPTRDIFEFLSAQDCVNFLRFTRSQIILMMELLCVPDRIRTECGYVLSGRTALCILLYRMAFPCRYKDMRVIFHLPDSLLCEAFNYMLHFMDETWGPLLTLDIGRLVPQLEVFVEALQAWGCPLPNCWAFIDGTVRAICRPKRNQRAYFNGHKRFHAIKFQAIVTPDGMVVDLFGPELG 744
R ++RIARK RAL +Q + + +L++ MWF +HV ++TLGRLA+DD PT RD F S QDCV +RFTR QI+LM+ELL VP IRT+CG+V+ GR ALC+LLYR+AFPCR +DMR++F +S +CE FN+MLHFMD WG LL+LD+ RLVP+L F EA+ GCPL +CWAFIDGTVR I RP RNQR ++NG+KR HAIKFQ +VTPDG+ VDL+G E+G
Sbjct: 33 RARDRIARKKRALLLMQWQQSYSLYTSMWFASHVAVMYTLGRLAIDDIPTGAARRDEDNFFSPQDCVELMRFTRDQIVLMLELLMVPAIIRTDCGFVVGGREALCVLLYRLAFPCRLEDMRLVFGQSESCICETFNWMLHFMDFKWGFLLSLDVQRLVPKLRTFAEAVYNKGCPLTHCWAFIDGTVRGIARPIRNQRFFYNGYKRKHAIKFQGVVTPDGLFVDLYGAEVG 262
BLAST of mRNA_P-littoralis_Contig1179.4.1 vs. uniprot
Match: A0A6H5JS57_9PHAE (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS57_9PHAE) HSP 1 Score: 296 bits (759), Expect = 3.590e-96 Identity = 139/231 (60.17%), Postives = 176/231 (76.19%), Query Frame = 1
Query: 52 LRLKERIARKNRALAFLQLRTAAALHSQMWFWAHVGFIHTLGRLALDDTPTHLPTRDIFEFLSAQDCVNFLRFTRSQIILMMELLCVPDRIRTECGYVLSGRTALCILLYRMAFPCRYKDMRVIFHLPDSLLCEAFNYMLHFMDETWGPLLTLDIGRLVPQLEVFVEALQAWGCPLPNCWAFIDGTVRAICRPKRNQRAYFNGHKRFHAIKFQAIVTPDGMVVDLFGPELG 744
LR+++RIARK RAL +Q + + +L++ MWF +H I+TLGRLA+DD PT R + F S QDCV F+RFTR QI+LM+ELL VP IRTECG+V+ GR ALC+LLYR+AFPC KDMR+ F L +S +CE FN+MLHFMD WG LL+LD+ RLVP+L F EA+ GCPL +CWAFIDGTVR I RP RN+R ++NG+KR HAIKFQ +VTPDG+ VDL+ E+G
Sbjct: 50 LRIRDRIARKKRALLPMQWQQSYSLYTSMWFASHFAVIYTLGRLAIDDIPTGAARRHVDNFFSPQDCVEFMRFTRDQIVLMLELLMVPAIIRTECGFVVGGREALCVLLYRLAFPCCLKDMRLDFGLSESCICETFNWMLHFMDFKWGFLLSLDVQRLVPKLRTFAEAVYNKGCPLTHCWAFIDGTVRGIARPIRNKRFFYNGYKRKHAIKFQGVVTPDGLFVDLYDAEVG 280
BLAST of mRNA_P-littoralis_Contig1179.4.1 vs. uniprot
Match: A0A6H5JYJ9_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYJ9_9PHAE) HSP 1 Score: 276 bits (706), Expect = 6.780e-91 Identity = 128/215 (59.53%), Postives = 164/215 (76.28%), Query Frame = 1
Query: 100 LQLRTAAALHSQMWFWAHVGFIHTLGRLALDDTPTHLPTRDIFEFLSAQDCVNFLRFTRSQIILMMELLCVPDRIRTECGYVLSGRTALCILLYRMAFPCRYKDMRVIFHLPDSLLCEAFNYMLHFMDETWGPLLTLDIGRLVPQLEVFVEALQAWGCPLPNCWAFIDGTVRAICRPKRNQRAYFNGHKRFHAIKFQAIVTPDGMVVDLFGPELG 744
+Q + + +L++ MWF +HV ++TLGRLA+DD PT RD F S Q+CV F+ S+I+LM+ELL VP IRTECG+V+ GR ALC+LLYR+AFPCR KDMR++F L +S +CE FN+MLHFMD WG LL+LD+ RLVP+L F EA+ GCPL +CWAFIDGTVR I RP RNQR ++NG+KR HAIKFQ +VTPDG+ VDL+G E+G
Sbjct: 1 MQWQQSYSLYTSMWFASHVAVMYTLGRLAIDDIPTGAARRDEDNFFSPQNCVEFM----SKIVLMLELLMVPAIIRTECGFVVGGREALCVLLYRLAFPCRLKDMRLVFGLSESCICETFNWMLHFMDFKWGFLLSLDVQRLVPKLRTFAEAVYNKGCPLTHCWAFIDGTVRGIARPIRNQRFFYNGYKRKHAIKFQGVVTPDGLFVDLYGAEVG 211
BLAST of mRNA_P-littoralis_Contig1179.4.1 vs. uniprot
Match: A0A6H5KRJ1_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRJ1_9PHAE) HSP 1 Score: 273 bits (698), Expect = 1.030e-88 Identity = 122/215 (56.74%), Postives = 160/215 (74.42%), Query Frame = 1
Query: 100 LQLRTAAALHSQMWFWAHVGFIHTLGRLALDDTPTHLPTRDIFEFLSAQDCVNFLRFTRSQIILMMELLCVPDRIRTECGYVLSGRTALCILLYRMAFPCRYKDMRVIFHLPDSLLCEAFNYMLHFMDETWGPLLTLDIGRLVPQLEVFVEALQAWGCPLPNCWAFIDGTVRAICRPKRNQRAYFNGHKRFHAIKFQAIVTPDGMVVDLFGPELG 744
L+ R +++ +WF + FI+ + L LDDTPT + RD+ F S QDCVNFLRFT+SQ++LM++LL +P IRT+CG+V+SGR ALC+LLYR+AFPCR KDMR++F + +S +CE FN+MLHF+D WG LL+LD+ RL P L F EA+ GCPL +CW FIDGTVR I RPK QR +NGHKR HA+KFQ ++TPDG+ VDL+GP G
Sbjct: 2 LRCRNLFEVYTDIWFVYKIAFIYAMVCLELDDTPTSIARRDVTAFFSPQDCVNFLRFTQSQVMLMLDLLLIPAFIRTDCGFVVSGREALCVLLYRLAFPCRLKDMRLVFGMSESCICEVFNWMLHFLDFRWGYLLSLDVARLQPHLIEFAEAIFNSGCPLTHCWGFIDGTVRGIARPKHWQRLLYNGHKRKHAMKFQGVITPDGLFVDLWGPVAG 216
BLAST of mRNA_P-littoralis_Contig1179.4.1 vs. uniprot
Match: A0A6H5JV22_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV22_9PHAE) HSP 1 Score: 270 bits (690), Expect = 1.950e-88 Identity = 120/208 (57.69%), Postives = 158/208 (75.96%), Query Frame = 1
Query: 112 TAAALHSQMWFWAHVGFIHTLGRLALDDTPTHLPTRDIFEFLSAQDCVNFLRFTRSQIILMMELLCVPDRIRTECGYVLSGRTALCILLYRMAFPCRYKDMRVIFHLPDSLLCEAFNYMLHFMDETWGPLLTLDIGRLVPQLEVFVEALQAWGCPLPNCWAFIDGTVRAICRPKRNQRAYFNGHKRFHAIKFQAIVTPDGMVVDLFGP 735
T +++ +WF ++ FI+ + RL LDDTPT + RD F S QDCVNFLRFT+SQ++L+++LL +P IRT+CG+V+SGR AL +L YR+AFPCR KDMR++F L +S +CEAFN+MLHF+D WG LL+LD+ RL P L F EA+ GCPL +CW FIDGTVR I RPK QR ++NGHKR HA+KFQ ++TPDG+ VDL+GP
Sbjct: 5 TVEQVYTDLWFVYNIAFIYAMARLELDDTPTSIARRDATAFFSPQDCVNFLRFTQSQVMLILDLLLIPAFIRTDCGFVVSGREALWVLQYRLAFPCRLKDMRLVFGLSESCICEAFNWMLHFLDFRWGYLLSLDVARLQPHLIEFAEAIFNSGCPLTHCWGFIDGTVRGIARPKYWQRLFYNGHKRKHAMKFQGVITPDGLFVDLWGP 212
BLAST of mRNA_P-littoralis_Contig1179.4.1 vs. uniprot
Match: D7G148_ECTSI (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G148_ECTSI) HSP 1 Score: 264 bits (675), Expect = 7.970e-86 Identity = 117/206 (56.80%), Postives = 154/206 (74.76%), Query Frame = 1
Query: 127 HSQMWFWAHVGFIHTLGRLALDDTPTHLPTRDIFEFLSAQDCVNFLRFTRSQIILMMELLCVPDRIRTECGYVLSGRTALCILLYRMAFPCRYKDMRVIFHLPDSLLCEAFNYMLHFMDETWGPLLTLDIGRLVPQLEVFVEALQAWGCPLPNCWAFIDGTVRAICRPKRNQRAYFNGHKRFHAIKFQAIVTPDGMVVDLFGPELG 744
++ +W ++ FIHT+ L DD T + RD+ F S QDCVNFLR T+ QI+LM++LL +P IRT+CG+V+SGR ALC+LLYR+AFPCR KDMR++F L +S +C+ FN+MLHF++ WG LL+LD+ RL P+L F EA+ CPL +CW FIDGTVR I RP R QR Y+NGHKR HAIKFQ ++TPDG+ VD++GP LG
Sbjct: 5 YTDIWMAYNMAFIHTMASLVADDVATRVARRDVTNFFSPQDCVNFLRCTQPQIMLMLDLLLIPAFIRTDCGFVVSGREALCVLLYRLAFPCRLKDMRLVFGLSESCICQTFNWMLHFLEFKWGWLLSLDVERLKPRLVEFAEAIYNADCPLTHCWGFIDGTVRGIARPVRFQRWYYNGHKRKHAIKFQGVITPDGLFVDMWGPVLG 210
BLAST of mRNA_P-littoralis_Contig1179.4.1 vs. uniprot
Match: D8LL85_ECTSI (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LL85_ECTSI) HSP 1 Score: 262 bits (669), Expect = 1.680e-83 Identity = 116/206 (56.31%), Postives = 153/206 (74.27%), Query Frame = 1
Query: 127 HSQMWFWAHVGFIHTLGRLALDDTPTHLPTRDIFEFLSAQDCVNFLRFTRSQIILMMELLCVPDRIRTECGYVLSGRTALCILLYRMAFPCRYKDMRVIFHLPDSLLCEAFNYMLHFMDETWGPLLTLDIGRLVPQLEVFVEALQAWGCPLPNCWAFIDGTVRAICRPKRNQRAYFNGHKRFHAIKFQAIVTPDGMVVDLFGPELG 744
++ MW ++ FI+T+ L DD T + RD+ F S QDC+NFLRFT+ QI+LM++LL +P IRT+CG+ +SGR ALC+LLYR+AFPCR KDMR++F L +S + E FN+MLHF++ WG LL+LD+ RL P+L F EA+ CPL +CW FIDGTVR I RP R QR Y+NGHKR HAIKFQ ++TPDG+ VD++GP LG
Sbjct: 5 YTDMWMAYNMAFIYTMASLVTDDAATRVARRDVTNFFSPQDCINFLRFTQPQIMLMLDLLLIPAFIRTDCGFAVSGREALCVLLYRLAFPCRLKDMRLVFGLSESCISETFNWMLHFLEFKWGWLLSLDVERLKPRLVEFAEAIYNADCPLTHCWGFIDGTVRGIARPVRFQRWYYNGHKRKHAIKFQGVITPDGLFVDMWGPVLG 210
BLAST of mRNA_P-littoralis_Contig1179.4.1 vs. uniprot
Match: A0A6H5KB08_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB08_9PHAE) HSP 1 Score: 260 bits (664), Expect = 5.170e-83 Identity = 117/191 (61.26%), Postives = 147/191 (76.96%), Query Frame = 1
Query: 172 LGRLALDDTPTHLPTRDIFEFLSAQDCVNFLRFTRSQIILMMELLCVPDRIRTECGYVLSGRTALCILLYRMAFPCRYKDMRVIFHLPDSLLCEAFNYMLHFMDETWGPLLTLDIGRLVPQLEVFVEALQAWGCPLPNCWAFIDGTVRAICRPKRNQRAYFNGHKRFHAIKFQAIVTPDGMVVDLFGPELG 744
+ RL LDDTPT + D F S QDCVNFLRFT+SQ++LM++LL +P IRT+C +V+SGR ALC+LLYR+AFPCR KDMR++F L +S +CEAFN+MLHF+D WG LL+LD+ RL P L F EA+ GCPL +CW FIDGTVR I RPK QR ++NGHKR HA+KFQ ++TPDG+ VDL+GP G
Sbjct: 1 MARLELDDTPTSIARSDATAFFSPQDCVNFLRFTQSQVMLMLDLLLIPAFIRTDCEFVVSGREALCVLLYRLAFPCRLKDMRLVFGLSESCICEAFNWMLHFLDFRWGYLLSLDVARLQPHLIEFAEAIFNSGCPLTHCWGFIDGTVRGIARPKYWQRLFYNGHKRKHAMKFQGVITPDGLFVDLWGPVAG 191
BLAST of mRNA_P-littoralis_Contig1179.4.1 vs. uniprot
Match: A0A6H5L370_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L370_9PHAE) HSP 1 Score: 237 bits (605), Expect = 2.600e-74 Identity = 108/171 (63.16%), Postives = 133/171 (77.78%), Query Frame = 1
Query: 232 FLSAQDCVNFLRFTRSQIILMMELLCVPDRIRTECGYVLSGRTALCILLYRMAFPCRYKDMRVIFHLPDSLLCEAFNYMLHFMDETWGPLLTLDIGRLVPQLEVFVEALQAWGCPLPNCWAFIDGTVRAICRPKRNQRAYFNGHKRFHAIKFQAIVTPDGMVVDLFGPELG 744
F S QDCV F+RFTR QI+LM+ELL VP IRTECG V+ GR ALC+LLYR+AFPCR KDMR++F L +S +CE FN+MLH MD LL+LD+ RLVP+L F EA+ GCPL +CWAFIDGTVR I RP RNQR +++G+KR HAIKFQ +VTPDG++ DL+ E+G
Sbjct: 4 FFSPQDCVEFMRFTRDQIVLMLELLMVPAIIRTECGVVVGGREALCVLLYRLAFPCRLKDMRLVFGLSESCICETFNWMLHIMDVKLRFLLSLDVQRLVPKLRTFAEAVYNKGCPLTHCWAFIDGTVRGIARPIRNQRFFYSGYKRKHAIKFQGVVTPDGLIDDLYAAEVG 174 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1179.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1179.4.1 >prot_P-littoralis_Contig1179.4.1 ID=prot_P-littoralis_Contig1179.4.1|Name=mRNA_P-littoralis_Contig1179.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=248bp RKAALLFQSRGCVIMARLRLKERIARKNRALAFLQLRTAAALHSQMWFWAback to top mRNA from alignment at P-littoralis_Contig1179:28799..30059+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1179.4.1 ID=mRNA_P-littoralis_Contig1179.4.1|Name=mRNA_P-littoralis_Contig1179.4.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1261bp|location=Sequence derived from alignment at P-littoralis_Contig1179:28799..30059+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1179:28799..30059+ >mRNA_P-littoralis_Contig1179.4.1 ID=mRNA_P-littoralis_Contig1179.4.1|Name=mRNA_P-littoralis_Contig1179.4.1|organism=Pylaiella littoralis U1_48|type=CDS|length=744bp|location=Sequence derived from alignment at P-littoralis_Contig1179:28799..30059+ (Pylaiella littoralis U1_48)back to top |