mRNA_P-littoralis_Contig7.223.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig7.223.1
Unique NamemRNA_P-littoralis_Contig7.223.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig7.223.1 vs. uniprot
Match: D7FV72_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV72_ECTSI)

HSP 1 Score: 655 bits (1689), Expect = 7.800e-223
Identity = 338/427 (79.16%), Postives = 371/427 (86.89%), Query Frame = 2 
Query:  617 MYLLQPMVNYLCKPPRRWCDKCVKRRGEVCFEGCFRVTKSRTYSALSPEEIVALELESARPAEVAPRGWDCFNRPLVPRWLAVILAISVVLTALATVGAIVYGSLLNLQDNFEKYEIGANRFATYIDRWLMKYHYSIGEDFVPYVLQGLRDQVPRVLKAALSSLQYFCLVAIFLVYLLISPVKPIKSSVWGIIDLHIRRYIRLKTMVGVLAATLVTAILWVLGVEMAYVFGIITFVLNFVPNLGAMIATFLPMPLVIFDPGMSHLNQVLAFLLPTTAHLVVGNLIEPGLFGESFELSPVVVLLSLAFWGSLWGIPGTILAVPMVVIARIVCDHLDHPYAKTCMRLLEGNVFEAREDDTLIPNWNNGAGGSA------SSVVSMFGGNDRADEALAAAEVGVGRRNQRLPAESAPGKRQEDKRRYGTG 1879
            MYLLQPMVNYLCKPPRRWCDKCVKRRGE+C EGCFRVTKSRTYSALSPE+I  LE+E        P GW  FN+P+VPRWLAVILAISVVLTALATVGAIVYGS+L+LQ NF KYE  A R A+ ID+ L KY+YSI EDF+P+ +  LR++VPR+LK  LSSL+YF LVAIFLVYLLISPVKPIKSSVWGIIDL IRRYIRLKTMVG+LAAT+VT +LWVLGV+MAYVFGIITFVLNFVPNLG MIATFLPMPL IFDP MSHLNQVLAF+LPTTAHLV+GNL+EPGLFGESFELSPVVVLLSLAFWGSLWGIPG ILAVPMVVI RIVCDHLDHPYAKT MRLLEGNVFEAREDDTLIPNWNNGAGG A      SS  S+FGG++RAD ALAAAE+G GRR++R  +E AP   ++D RRYGTG
Sbjct:    1 MYLLQPMVNYLCKPPRRWCDKCVKRRGEICCEGCFRVTKSRTYSALSPEDI--LEMEEGPAEHYPPTGWGLFNKPVVPRWLAVILAISVVLTALATVGAIVYGSVLSLQANFGKYETEAERMASVIDKRLHKYNYSINEDFMPFAIGSLRERVPRLLKLILSSLEYFFLVAIFLVYLLISPVKPIKSSVWGIIDLQIRRYIRLKTMVGMLAATVVTTMLWVLGVQMAYVFGIITFVLNFVPNLGPMIATFLPMPLAIFDPDMSHLNQVLAFVLPTTAHLVIGNLVEPGLFGESFELSPVVVLLSLAFWGSLWGIPGMILAVPMVVITRIVCDHLDHPYAKTLMRLLEGNVFEAREDDTLIPNWNNGAGGGANGGGISSSPASVFGGSERADVALAAAEIGAGRRSRRSSSEKAPVNTEDDHRRYGTG 425
[Close]
BLAST of mRNA_P-littoralis_Contig7.223.1 vs. uniprot
Match: A0A835Z5M1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5M1_9STRA)

HSP 1 Score: 391 bits (1005), Expect = 2.890e-121
Identity = 201/410 (49.02%), Postives = 275/410 (67.07%), Query Frame = 2 
Query:  554 LGFMMFFLRTILIPFAIAVFLMYLLQPMVNYLCKPPRRWCDKCVKRRGEVCFEGCFRVTKSRTYSALS--------------------------------PEEI-VALELESARPAEVAPRGWDCFNRPLVPRWLAVILAISVVLTALATVGAIVYGSLLNLQDNFEKYEIGANRFATYIDRWLMKYHYSIGEDFVPYVLQGLRDQVPRVLKAALSSLQYFCLVAIFLVYLLISPVKPIKSSVWGIIDLHIRRYIRLKTMVGVLAATLVTAILWVLGVEMAYVFGIITFVLNFVPNLGAMIATFLPMPLVIFDPGMSHLNQVLAFLLPTTAHLVVGNLIEPGLFGESFELSPVVVLLSLAFWGSLWGIPGTILAVPMVVIARIVCDHLDHPYAKTCMRLLEGNVFEARED 1684
            +GFM++FLRTIL+PF IA+F M+LLQP+VN L +PPRRWC+KC KR GE+C EG   +T+SR YS +S                                P ++ V L+ E+  P    P    C + P++PRWLAVI+A+ + ++ +  +G IVY S++NL+  F +YE GA+  A  + +++    YS+ ED VP++ + +RD  PRVL   LSS+ Y   V IFL +LLISP +PI SS WG IDLHIRRYIRLKT + V       AILW L +++++VFG++ FVLNF+PN+G M+AT LPMPLV+ DP +S +N+VLAF LPT  HL+VGN++EP +FGE F LSPVVVLL++ FW  LWG+PG IL+VP++V  RI C HL+HPYA+T + L+EG +FEA  D
Sbjct:    1 MGFMLYFLRTILVPFFIAIFFMHLLQPVVNLLSRPPRRWCNKCTKRNGELCCEGMNTLTRSRRYSDISDGGTAHVTPAPAVLSGGATGFRPDVARHLRHRPHQLSVDLDDEALAP----PPALTCMDYPIIPRWLAVIMALVLAVSLVIVLGVIVYTSVMNLETQFYRYEEGASNLAKLLKKYMALVDYSLDEDVVPWLFKTMRDLTPRVLAMVLSSVAYMIYVVIFLTFLLISPTRPIPSSAWGAIDLHIRRYIRLKTSICVSVGISTGAILWALNIQLSWVFGLVAFVLNFLPNIGPMVATCLPMPLVLLDPDLSAVNKVLAFALPTLIHLMVGNVVEPKIFGEHFSLSPVVVLLNITFWSLLWGLPGAILSVPLLVCVRITCLHLEHPYARTAVALMEGRIFEAHLD 406
[Close]
BLAST of mRNA_P-littoralis_Contig7.223.1 vs. uniprot
Match: A0A7R9YDP2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDP2_9STRA)

HSP 1 Score: 283 bits (725), Expect = 5.740e-81
Identity = 160/428 (37.38%), Postives = 241/428 (56.31%), Query Frame = 2 
Query:  590 IPFAIAVFLMYLLQPMVNYLCKPPRRWCDKCVKRRGEVCFEGCFRVTKSRTY-----------------SAL-----SP-----------------EEIVALELESA-----------RPAEVAPRGWD-------------CFNRPLVPRWLAVILAISVVLTALATVGAIVYGSLLNLQDNFEKYEIGANRFATYIDRWLMKYHYSIGEDFVPYVLQGLRDQVPRVLKAALSSLQYFCLVAIFLVYLLISPVKPIKSSVWGIIDLHIRRYIRLKTMVGVLAATLVTAILWVLGVEMAYVFGIITFVLNFVPNLGAMIATFLPMPLVIFDPGMSHLNQVLAFLLPTTAHLVVGNLIEPGLFGESFELSPVVVLLSLAFWGSLWGIPGTILAVPMVVIARIVCDHLDHPYAKTCMRLLEGNVFEARED 1684
            IPF +A+ LMYLLQP+V+ L K PRRWCDKC  RRGE C E   R+ +S  Y                 S+L     SP                 +E+  L+L+             RP  V P  +              C ++ + PRWLAV +A+ V +  L  +G  +Y S+ +   N+ KYE+GA R    + + L     ++ +D VP++++  +   P  L+  +        V IFL+YLL++PV P     WG ID  IRRYI LKT++      +V  + W+L V++A+++ ++TF L ++PN+G + ATFLPMPLVI DP +S   +  AF+LP T H+++GN++EP LFG  FE+ P++VL++LAFWG LWGIPG +L+VP++ + RI+C+ LDHPYAK  +R++E   F+ R++
Sbjct:    2 IPFLVALVLMYLLQPIVSVLTKAPRRWCDKCFMRRGERCCESVRRLVQSEQYHQYLAGKLMPLRESWSRSSLRAWTSSPWGSRESTGGGKTQEDDEDELDDLDLDEEHSLLRRGRIRHRPV-VPPMTFQSRLTGTCHECIAFCLDKVIFPRWLAVFVALVVAVGILTGLGMFIYSSISSF--NWLKYELGAQRLTRRLAKLLAVVDINLNQDLVPFLVEKAKSLTPYALQGIVDCFSSGAFVLIFLMYLLMTPVSPPSGGTWGEIDTQIRRYILLKTLICTTVGVVVGVVFWLLCVDLAFLWALLTFFLQYIPNVGPIFATFLPMPLVILDPMLSIPAKFCAFVLPATVHMIIGNIMEPRLFGREFEMHPIMVLIALAFWGVLWGIPGMVLSVPLMAVTRIICEDLDHPYAKIAVRIMECRAFDDRDE 426
[Close]
BLAST of mRNA_P-littoralis_Contig7.223.1 vs. uniprot
Match: I2CPB0_NANGC (Membrane protein-a permease n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPB0_NANGC)

HSP 1 Score: 247 bits (630), Expect = 9.310e-70
Identity = 129/279 (46.24%), Postives = 184/279 (65.95%), Query Frame = 2 
Query:  848 PRWLAVILAISVVLTALATVGAIVYGSLLNLQDNFEKYEIGANRFATYIDRWLMKYHYSIGEDFVPYVLQGLRDQVPRVLKAALSSLQYFCLVAIFLVYLLISPVKPIKSSVWGIIDLHIRRYIRLKTMVGVLAATLVTAILWVLGVEMAYVFGIITFVLNFVPNLGAMIATFLPMPLVIFDPGMSHLNQVLAFLLPTTAHLVVGNLIEPGLFGESFELSPVVVLLSLAFWGSLWGIPGTILAVPMVVIARIVCDHLDHPYAKTCMRLLEGNVFEARED 1684
            PR LAV+LAI+  +      G IVY S+ +LQ ++  YE+GA +    ++ WL K H S+ +D VPY++  L+  +P ++     ++    LV IFLVYLL S  + +   VW  ID+HIRRYIRLKT V VL A LV   L +L V  + +FG++TFVLN++PN G ++AT LP+PLV+F P +S   +VLA +LP+  H  VG  +EP LFGE  E+ P+++LLSLAFW  LWG+ G IL+VP++   RIVC +L+HPYA+   R++EG +F+A  D
Sbjct:    4 PRSLAVMLAIAFAMGIFVLFGMIVYHSIQSLQHDWHIYELGAEQAVDNLNAWLTKLHVSLNDDLVPYLMDNLKKAIPTLVNDIWVAVANGALVLIFLVYLLGSRPQELPPGVWRKIDIHIRRYIRLKTFVCVLIAVLVGCCLSLLRVPFSGLFGLLTFVLNYIPNFGPIVATLLPLPLVVFSPDLSVTAKVLALVLPSLGHFFVGYYLEPRLFGEHLEVHPIIILLSLAFWSVLWGVSGMILSVPLIACMRIVCQNLEHPYARVAARIIEGRLFDAGLD 282
[Close]
BLAST of mRNA_P-littoralis_Contig7.223.1 vs. uniprot
Match: A0A7S4DFQ9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DFQ9_HETAK)

HSP 1 Score: 219 bits (557), Expect = 1.390e-59
Identity = 114/281 (40.57%), Postives = 171/281 (60.85%), Query Frame = 2 
Query:  833 NRPLVPRWLAVILAISVVLTALATVGAIVYGSLLNLQDNFEKYEIGANRFATYIDRWLMKYHYSIGEDFVPYVLQGLRDQVPRVLKAALSSLQYFCLVAIFLVYLLISPVKPIKSSVWGIIDLHIRRYIRLKTMVGVLAATLVTAILWVLGVEMAYVFGIITFVLNFVPNLGAMIATFLPMPLVIFDPGMSHLNQVLAFLLPTTAHLVVGNLIEPGLFGESFELSPVVVLLSLAFWGSLWGIPGTILAVPMVVIARIVCDHLDHPYAKTCMRLLEGNVFEA 1675
             RPL+PRW AV L  ++ L  LA +G +V+ S+  +Q    KY  G  +    ++ + +  +  + + ++      +   +P++       L Y   + IFLVYLL+SPV P  ++VWG IDLH+RR+IRLKT++ +       A+L  L V++A VFG++ F+LN+VPN+G   AT LP  L + DP +    +VL F LPT  H+ VGN +EP + GE  +L PV VLL++AFW  LWG+PG ++AVP+V + RIVC HL+HPY+   + + EG   EA
Sbjct:   17 GRPLMPRWFAVCLTFALALGVLALLGLLVWESVAQVQQQAGKYRQGYQQLLGVLNEYALTMNIDL-DIYMDSFYNQVTTWLPKIFTETAKGLGYAFFICIFLVYLLLSPVLPAPNNVWGQIDLHLRRWIRLKTIICLTVGVCTAALLSALRVDLALVFGLLAFILNYVPNVGPTAATLLPCGLALLDPTLGTAPKVLVFALPTALHMAVGNFVEPLVMGEHLDLHPVCVLLAMAFWLILWGVPGMLMAVPLVSMLRIVCLHLEHPYSNVMVLVFEGRFLEA 296
[Close]
BLAST of mRNA_P-littoralis_Contig7.223.1 vs. uniprot
Match: A0A7S1HYU5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1HYU5_9EUGL)

HSP 1 Score: 185 bits (469), Expect = 9.500e-49
Identity = 104/274 (37.96%), Postives = 164/274 (59.85%), Query Frame = 2 
Query:  851 RWLAVILAISVVLTALATVGAIVYGSLLNLQDNFEKYEIGANRFATYIDRWLMKYHYSIGED-FVPYVLQGLRDQVPRVLKAALSSLQYFCLVAIFLVYLLISPVKPIKSSVWGIIDLHIRRYIRLKTMVGVLAATLVTAILWVLGVEMAYVFGIITFVLNFVPNLGAMIATFLPMPLVIFDPGMSHLNQVLAFLLPTTAHLVVGNLIEPGLFGESFELSPVVVLLSLAFWGSLWGIPGTILAVPMVVIARIVCDHLDHPYAKTCMRLLEGNVF 1669
            R LAV++AI++V+  ++  G  +Y SL ++Q    KY+ GA R    + + L +    + E+  VP+ +  L++ +P +L A    L+   +V IFL+YLL+SP       V+  ++ H+R YI +K  +  L   +V   LW LG+  + VFG +T V NF+PN+GA+ +   P PLV FDP ++   Q+LAF++P   H ++GN IEP + G+ FEL PV+VLLSL FW  LWGI G +LA+P++ + R+V    +   A+  +R+LE   F
Sbjct:    1 RVLAVLVAIAIVVAVVSGSGYFMYLSLKSMQSQIPKYQKGAFRAYDKVSQLLRQVDIHVNEENVVPWGIDYLKNLLPNLLSALSFYLEKMLIVLIFLIYLLLSPSDARSDGVFSRVNEHVRLYIIMKGALSCLLGAMVAFTLWHLGISCSPVFGFLTAVANFIPNVGALASVMAPFPLVAFDPDLTFQAQMLAFVVPFGLHFIMGNCIEPAVLGDRFELHPVIVLLSLIFWALLWGIAGMVLAIPLMAVVRLVLLEFNSTPARKIVRILEDAHF 274
[Close]
BLAST of mRNA_P-littoralis_Contig7.223.1 vs. uniprot
Match: A0A7S4B3S1_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B3S1_CHRCT)

HSP 1 Score: 190 bits (482), Expect = 1.100e-48
Identity = 136/417 (32.61%), Postives = 205/417 (49.16%), Query Frame = 2 
Query:  449 EEAPQGFKVDALGMAHILRTESLTAICLLIIAACALGFMMFFLRTILIPFAIAVFLMYLLQPMVNYLCKPPRRWCDKCVKRRGEVCFEGCFRVTKSRTYSALSPEEIVALELESARPAEVAPRGWDCFNRPLVPRWLAVILAISVVLTALATVGAIVYGSLLNLQDNFEKYEIGANRFATYIDRWLMKYHYSIGEDFVPYVLQGLRDQVP------RVLKAALSSLQYFCLVAIFLVYLLISPVKPIKSSVWGII-------DLHIRRYIRLKTMVGVLAATLVTAILWVLGVEMAYVFGIITFVLNFVPNLGAMIATFLPMPLVIFDPGMSHLNQVLAFLLPTTAHLVVGNLIEPGLFGESFELSPVVVLLSLAFWGSLWGIPGTILAVPMVVIARIVCDHLDHPYAKTCMRLLEG 1660
            ++AP+   + AL +      E +  + L ++    +G  + FLR +L+PF +A+ L +LLQP +  L + P R C          C E        + YS   P   + L + S           D   R  +P WLAV++ + +        G ++  S+       E Y         +   WL K    + +      L  L  ++P       V+++ LS L    LV +F V+LL+      +S     I       D+ IR +I+ K ++  L   L   ILW+LGVE+  VF ++ F LNF+PNLGA+IAT LP+P V F+P    L+ +LA +LP   H +VGN++EP  FG + EL PVVVLLSL  WG+LWG+PG +LAVP+  +ARI   H+DHP  +    +L G
Sbjct:   22 DDAPRNPLLGALSVEETRVEERIRTLALCVMGLAVVGAALSFLRAVLVPFVLALALRHLLQPFIEALTERPIRCCGI------SFCSE--------QPYSQHHP---LCLRILS-----------DMVCRLKLPHWLAVLVTLLMTFGLFCVFGLVIADSVQRFASRAELYSEQVRHIFNWFILWLDKK--GLDQTLRLEKLNELAAKLPLTNLVLAVIESLLSLLSNSLLVGLFTVFLLLGDSSHEESETGSSILSVSRQADMQIRIFIKGKVLLSFLVGALTALILWILGVELWLVFAVLAFWLNFIPNLGAVIATLLPVPAVAFNPSFGTLSAILAIVLPLILHALVGNVLEPIAFGHTLELHPVVVLLSLMLWGTLWGVPGLVLAVPVTAVARIHLAHIDHPLPRYIASVLVG 408
[Close]
BLAST of mRNA_P-littoralis_Contig7.223.1 vs. uniprot
Match: A0A7S2V037_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V037_9STRA)

HSP 1 Score: 182 bits (461), Expect = 1.520e-48
Identity = 88/163 (53.99%), Postives = 120/163 (73.62%), Query Frame = 2 
Query: 1187 GIIDLHIRRYIRLKTMVGVLAATLVTAILWVLGVEMAYVFGIITFVLNFVPNLGAMIATFLPMPLVIFDPGMSHLNQVLAFLLPTTAHLVVGNLIEPGLFGESFELSPVVVLLSLAFWGSLWGIPGTILAVPMVVIARIVCDHLDHPYAKTCMRLLEGNVFEA 1675
            G IDL +RRYIRLK+ + +    L   I+++L VE+A VFG++ FVLN++PN+G +IAT LPMPLV+FDP  + L   LAF LP+  H+V+GN IEP + GESF ++P+VVLL+++FW  LWGIPG I++VP+V I RI C H DHPYAK  + L+E N  +A
Sbjct:    4 GQIDLQVRRYIRLKSFICIAVGILTGLIMYLLKVELAMVFGLLAFVLNYIPNIGPLIATMLPMPLVLFDPDKTWLAVGLAFFLPSVVHMVMGNFIEPYVMGESFTIAPIVVLLAISFWSVLWGIPGMIMSVPLVSILRICCVHSDHPYAKVAVSLMEANFVKA 166
[Close]
BLAST of mRNA_P-littoralis_Contig7.223.1 vs. uniprot
Match: A0A7S2WLH4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLH4_9STRA)

HSP 1 Score: 189 bits (480), Expect = 6.580e-48
Identity = 145/421 (34.44%), Postives = 211/421 (50.12%), Query Frame = 2 
Query:  509 ESLTAICLLIIAACALGFMMFFLRTILIPFAIAVFLMYLLQPMVNYLCKPPRRWCDKCVKRRGEVCFEGCFRVTKSRTYSALSPEEIVALELESARPAEVAPRGWDCFNRPLVPRWLAVILAISVVLTALATVGAIVYGSLLNLQDNFEKYEIGANRFATYIDRWLMKYHYSIGEDFVPYV--LQGLRDQVP------RVLKAALSSLQYFCLVAIFLVYLLISPVKPIKSSVWGIIDLHIRRYIRLKTMVGVLAATLVTAILWVLGVEMAYVFGIITFVLNFVPNLGAMIATFLPMPLVIFDPGMSHLNQVLAFLLPTTAHLVVGNLIEPGLFGESFELSPVVVLLSLAFWGSLWGIPGTILAVPMVVIARIVCDHLDHPYAKTCMRLLEGN----VFEAREDDTLIPNWNNGAGGSASS 1735
            E L  + L + A   + F ++ LR +LIP  +A+ L YLLQP++++L   P             VC  G  R   +       P  +  L  E           W+   +   P WLAV++A+ V  T LA +G IV  SL     + + Y          + R L+ +   +G D       ++ L  ++P      R  ++ L  L    LV +F VYL+ SP    +S V   +D  I  YI+ K ++ +L   L   ILW+  +++  VFG++ F LNFVPN+GA+IA  LP+P+V+ DP  + L  +L F LP   H +VGN IEP +FG S +L PVVVLLSL  WGSLWG+ G +LAVPM  I RI   H+DHP  +    LL G+      E+   D +     + AGG+A+S
Sbjct:   13 ERLRTLALSVCAGGVISFGLYHLRGVLIPLVLALALKYLLQPVIDWLTVRPL------------VCCGGHARFCVNPP--PXXPRCLACLRNE-----------WEMVMQVRFPHWLAVLVALWVAFTILAILGFIVADSLRIFSSHADTYTSQVQ----ILFRGLVDWMEGMGLDRTTQAEKVKQLAGELPIANLILRFGESMLEILSNLFLVLLFTVYLIASPSHS-RSRVLAQVDAQILTYIKGKVLLSLLTGALTALILWLNKLDLWLVFGVLAFWLNFVPNVGAVIAVALPLPVVLIDPSSTRLQAILTFSLPLAVHAIVGNFIEPIVFGHSMDLKPVVVLLSLLVWGSLWGVTGMVLAVPMTAILRIHLSHIDHPLPRFIAGLLVGHHGSSSAESHTADDMDYLEEDSAGGTATS 403
[Close]
BLAST of mRNA_P-littoralis_Contig7.223.1 vs. uniprot
Match: A0A7S1CFD1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CFD1_9STRA)

HSP 1 Score: 178 bits (452), Expect = 7.010e-46
Identity = 112/290 (38.62%), Postives = 165/290 (56.90%), Query Frame = 2 
Query:  818 GWDCFNRPLVPRWLAVILAISVVLTALATVGAIVYGSLLNLQ-DNFEKYEIGANRFATYIDRWLMKYHYSIGEDFVPYVLQ-----GLRDQVPRVLKAALSSLQYFCLVAIFLVYLLISPVKPIKSSVWGIIDLHIRRYIRLKTMVGVLAATLVTAILWV-LGVEMAYVFGIITFVLNFVPNLGAMIATFLPMPLVIFDPGMSHLNQVLAFLLPTTAHLVVGNLIEPGLFGESFELSPVVVLLSLAFWGSLWGIPGTILAVPMVVIARIVCDHLDHPYAKTCMRLLEGNV 1666
            GW       +PR LAV++A+SV   AL+ +  +V  ++   + D+   Y   A+R A     WL   H   G D    V        + D V   L   + ++    L+ + ++YLL         S+ G +D  I+RYI +KT++ +    L   IL   LGV MA++FG++TF LNFVPN+G +IAT LP P+V+ DP +     +LAF+LPT  H ++GN +EP +FG S EL PVVV++SL FW +LWG+ G IL++P+V   RIV  H+ HPY+   +RLLEG +
Sbjct:   23 GWRLTR---MPRGLAVLIALSVAAGALSGLVLLVADAVQTFERDSLPVYRENASRVAERTLTWL---HIMFGVDAASLVDSVQKNVPVADIVQGALLELIDAVGNTFLILLLVLYLLFEQGAHAPDSMRGKVDDSIQRYIGIKTLISIAVGILTYIILGPGLGVRMAHLFGVLTFFLNFVPNVGPVIATALPFPVVVLDPALGTSQMLLAFVLPTLVHALIGNWVEPKIFGHSLELHPVVVIVSLGFWYALWGVTGAILSIPLVASLRIVLTHIRHPYSVAVIRLLEGQL 306
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig7.223.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV72_ECTSI7.800e-22379.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z5M1_9STRA2.890e-12149.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9YDP2_9STRA5.740e-8137.38Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
I2CPB0_NANGC9.310e-7046.24Membrane protein-a permease n=1 Tax=Nannochloropsi... [more]
A0A7S4DFQ9_HETAK1.390e-5940.57Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S1HYU5_9EUGL9.500e-4937.96Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S4B3S1_CHRCT1.100e-4832.61Hypothetical protein n=2 Tax=Chrysotila carterae T... [more]
A0A7S2V037_9STRA1.520e-4853.99Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A7S2WLH4_9STRA6.580e-4834.44Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1CFD1_9STRA7.010e-4638.62Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig7contigP-littoralis_Contig7:867691..881845 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FV72
PFAMsAI-2E_transport
Model size3629
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal anchor
Exons14
Evalue1.48e-233
EggNOG OGsCOG0628@1|root,2QUB1@2759|Eukaryota
Ec32 ortholog descriptionUncharacterised protein family UPF0118
Ec32 orthologEc-12_007310.1
DescriptionAI-2E family transporter
Cds size1524
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig7.223.1prot_P-littoralis_Contig7.223.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig7 868052..880101 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791456.1892662-UTR-P-littoralis_Contig7:867690..8680511680791456.1892662-UTR-P-littoralis_Contig7:867690..868051Pylaiella littoralis U1_48UTRP-littoralis_Contig7 867691..868051 +
1680791456.3640857-UTR-P-littoralis_Contig7:880101..8818451680791456.3640857-UTR-P-littoralis_Contig7:880101..881845Pylaiella littoralis U1_48UTRP-littoralis_Contig7 880102..881845 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791456.2030773-CDS-P-littoralis_Contig7:868051..8681131680791456.2030773-CDS-P-littoralis_Contig7:868051..868113Pylaiella littoralis U1_48CDSP-littoralis_Contig7 868052..868113 +
1680791456.2158265-CDS-P-littoralis_Contig7:872830..8729501680791456.2158265-CDS-P-littoralis_Contig7:872830..872950Pylaiella littoralis U1_48CDSP-littoralis_Contig7 872831..872950 +
1680791456.2259262-CDS-P-littoralis_Contig7:873359..8734241680791456.2259262-CDS-P-littoralis_Contig7:873359..873424Pylaiella littoralis U1_48CDSP-littoralis_Contig7 873360..873424 +
1680791456.236188-CDS-P-littoralis_Contig7:874130..8742551680791456.236188-CDS-P-littoralis_Contig7:874130..874255Pylaiella littoralis U1_48CDSP-littoralis_Contig7 874131..874255 +
1680791456.246946-CDS-P-littoralis_Contig7:874737..8748791680791456.246946-CDS-P-littoralis_Contig7:874737..874879Pylaiella littoralis U1_48CDSP-littoralis_Contig7 874738..874879 +
1680791456.2629244-CDS-P-littoralis_Contig7:875116..8752051680791456.2629244-CDS-P-littoralis_Contig7:875116..875205Pylaiella littoralis U1_48CDSP-littoralis_Contig7 875117..875205 +
1680791456.2721188-CDS-P-littoralis_Contig7:875697..8758231680791456.2721188-CDS-P-littoralis_Contig7:875697..875823Pylaiella littoralis U1_48CDSP-littoralis_Contig7 875698..875823 +
1680791456.2830245-CDS-P-littoralis_Contig7:876642..8767071680791456.2830245-CDS-P-littoralis_Contig7:876642..876707Pylaiella littoralis U1_48CDSP-littoralis_Contig7 876643..876707 +
1680791456.2962565-CDS-P-littoralis_Contig7:877093..8771721680791456.2962565-CDS-P-littoralis_Contig7:877093..877172Pylaiella littoralis U1_48CDSP-littoralis_Contig7 877094..877172 +
1680791456.308844-CDS-P-littoralis_Contig7:877609..8777721680791456.308844-CDS-P-littoralis_Contig7:877609..877772Pylaiella littoralis U1_48CDSP-littoralis_Contig7 877610..877772 +
1680791456.3203077-CDS-P-littoralis_Contig7:878304..8783511680791456.3203077-CDS-P-littoralis_Contig7:878304..878351Pylaiella littoralis U1_48CDSP-littoralis_Contig7 878305..878351 +
1680791456.3307617-CDS-P-littoralis_Contig7:878855..8789631680791456.3307617-CDS-P-littoralis_Contig7:878855..878963Pylaiella littoralis U1_48CDSP-littoralis_Contig7 878856..878963 +
1680791456.3411689-CDS-P-littoralis_Contig7:879436..8795561680791456.3411689-CDS-P-littoralis_Contig7:879436..879556Pylaiella littoralis U1_48CDSP-littoralis_Contig7 879437..879556 +
1680791456.353742-CDS-P-littoralis_Contig7:879888..8801011680791456.353742-CDS-P-littoralis_Contig7:879888..880101Pylaiella littoralis U1_48CDSP-littoralis_Contig7 879889..880101 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig7.223.1

>prot_P-littoralis_Contig7.223.1 ID=prot_P-littoralis_Contig7.223.1|Name=mRNA_P-littoralis_Contig7.223.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=508bp
MAWPPWAPPGGSGGNISPHSRKRSASFVVEEAPQGFKVDALGMAHILRTE
SLTAICLLIIAACALGFMMFFLRTILIPFAIAVFLMYLLQPMVNYLCKPP
RRWCDKCVKRRGEVCFEGCFRVTKSRTYSALSPEEIVALELESARPAEVA
PRGWDCFNRPLVPRWLAVILAISVVLTALATVGAIVYGSLLNLQDNFEKY
EIGANRFATYIDRWLMKYHYSIGEDFVPYVLQGLRDQVPRVLKAALSSLQ
YFCLVAIFLVYLLISPVKPIKSSVWGIIDLHIRRYIRLKTMVGVLAATLV
TAILWVLGVEMAYVFGIITFVLNFVPNLGAMIATFLPMPLVIFDPGMSHL
NQVLAFLLPTTAHLVVGNLIEPGLFGESFELSPVVVLLSLAFWGSLWGIP
GTILAVPMVVIARIVCDHLDHPYAKTCMRLLEGNVFEAREDDTLIPNWNN
GAGGSASSVVSMFGGNDRADEALAAAEVGVGRRNQRLPAESAPGKRQEDK
RRYGTGA*
back to top

mRNA from alignment at P-littoralis_Contig7:867691..881845+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig7.223.1 ID=mRNA_P-littoralis_Contig7.223.1|Name=mRNA_P-littoralis_Contig7.223.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=14155bp|location=Sequence derived from alignment at P-littoralis_Contig7:867691..881845+ (Pylaiella littoralis U1_48)
TTCGGGGGTTCCGCAGTTCAGTTAGCTGGATGCTGTAGCAGTGACTTACT
ATTGTTGACGAGGACGAGCCCCCCACTGCCCATGAGCACGCCGTTCCACC
GCACCGTGCCTCCCACCGCCGTTGACCGGCGATGCTGAATGCACTTGACG
TGTTCAAACCTCACACACCTTCAAAGTTCCTTGCCCCTGTGATCGAGCAT
TGAATATTTTCTTTGAGTAGGCTGCAATATCTTGGAAAGGGTCTTCAACT
AGGCTTGCACCAGTCGCGGTATACTCGATACATTTTGACGATCTGCTGCT
GCTGTTATATTTGGAACTTGGTTCAAGTACCGAGTGCCCGCGGTCATCAG
GGGCGCAGGCTATGGCGTGGCCACCATGGGCACCTCCGGGGGGGTCTGGT
GGGAATATCTCACCTCACTCAAGGTGAGAGCCCGTGGAGTACTCGACAAA
GTGCACCAGAAACTGGGAACCCCTTTCATGCACAGCAGAAGGTACGGCAG
TAGTACCGGCATGTTTAACGGATCAGAGATTCACCAATCCGATCTAGAAA
TAATCAGGGATGGGGGAAACCGCAGAGATTCATGTTACCTACCGGTAATT
ACCCCAAATCAGGAATTAATTCATGTTACCTACGGTAATTACCGTTACCG
CAAGGGGACGAAAACGCCCCATCCCCGGGGGTTCCGTGTGTAGCTGTATT
ACCCCACCCCTGGGGATTCTGTACCCCATCCCAGGGGGTTCTGGGTCTAG
CTTTGTGCTTTGCTCTTCGCGTTCCTCGACAAAAATGTGGTTGTCGAGTG
CTGCCTTCTCCAAATCTGCAGAGGTTCGGACGCATATTGTACTATGTGTT
TATGAGAGCGGCCCGGCCCTCGAGACCATCGGGCTGGGAGGCGATGCTGC
TGGTGGCGTCGATGGGGTTCTGCACGCTCATGTTGTGGTCTGCTGTGTTG
GTGTGGTCTGCTGTGTGCTGTGTGCTGTGAGCTGTGTTTTTGAATTTGAA
AGGGGGCCGTTGGTGGGGACAGGCGGGGTATGCTGGGGCACCGCAAAAAT
AACCGCAAAATAACCCCGGAAAAACGAAGAAAAACCATGTTACCTATCCG
CGCACTACTATGTTACCGGTAATTACGGGACGCGGTTTTCCCCATCCCTG
GAAATAATCCCGCCACCACGGGGGTCGTGCTAAGGGGACGTAGTGCTCAG
AGTAAAGCATTACGCGTGTCATCGGAGTAAGCAGCGGGAGTGGTAACGTG
TGACCTTCATCCAGCTGCACCCAAGCTGCAATTGTTTGCGTTGTGCTACT
GCTAGAGCAGCAAGTGTATAGCCAACACCCCAACACCCCCCACGGAAAAA
TTCAATCTAAAATATTACTCTGGAGTATATATTGGAGTACCTGGTATATA
CGGAGTATGTATTTTTTTCTTATATTTAAAATATTGTTTGAATTGGAGTG
AACCAGCCGCGATTTTGCGAAGGGACGACGAGAAGATCATGGGACATTTT
GACATTTCCAAATGATGTGTTCAAAATCAGGAAAATCCCGCTTTGCAACC
AGCTTAGAGTTACGCACCAGGTATCATACATGCGATACGAGTAAAGGACA
CCTGGGAATGGGTCGTGCATTTTGATTACAGGCTTTACAAAAACGCCTGG
TTATTCTAGGTTTCCTAACTCTATCTACAGTACGAAATCAACTGCTTTCT
TATTTTCATCTGATGGCATGCTCCCAGCGGCAGTCGCTGTGACAAACACG
TTACTACGCAGTACGAATTTATGGTGCACTCTAGGGATCCAAGTCCTTGC
AACTATGAACCAGAGATTCCTCCTTTTTCGATTTTCGAAACGAGCCCTTC
TTCATCGAGTTCTGTGAGCTACAACACGTACCGTAGTTTGGATGCTACTG
CAGCGGCCACTATTTTTGAACGCCTCCAGCATGCAGCAGCCGAAAAATTA
GGGCATGCGTGAGTGCCTGCGGCCTTTAAATCAATCACGGCGATGGGGAG
CAGGGTACCATGTGAGGAGAGTACTGTGCTGAAAGAGCTGTCGCAGGTAC
TCAGACATCGTATGCTTTTCTTTTTTCGACTGCTATGTGCTCAAAGCGTT
AAAAAAAAAAATGCTACTGCTGTACAGCAGCAGCCGAACTACTCCTCTAA
GCTCACATAAATCGAATGGGTTGCTCCAGTACTCTGTACAGCAGCGATTG
TACTACTGTACGAAATCATACAACAGCTTGAAAGATGTTGGTTATCGATC
ATCTGCCGCCATTTCGACACAGCTTTTTTTTTTTTCACCAACATATCAAT
ATGTTCTCCTCTCTCCAGATAAAAAATTGTCTTGAAGAGTCTGATCAGCT
CAGGGGAGCTGCGACGATACTTAATCCTACTATTTGTATGTCGAAAAACA
GGTTGTACATCGAACTATATGTTTACACCCTACAGGTAGATGTGTCTACA
CCTTGAGCTCGTTGTTGAGGCCACTCTGGGACCAGTACAACAAAAAGGGG
GTCACGTGCTGCTGTATAGGAATGGCATTTCACACTTAAAACAAAATAAT
TGAACGTACCAAAGGGTCAGGGTTTTGCACAAACGAAGCTTTATTTTGGG
GGGGACGAACATTCACCAGGAACAACATTCAGGAGCAATTCGGGCCTTAG
ATCGAAATTTGCTTCCGCTGCGGGCGATTACACCTTTACCAGTATCTGTT
TAGATTTTTGACTTAGAAATTCGCCCGATCAAGCAGCTAAACAATCGTCC
GATCCGCCTCTTCATTGGGGACGCACACGCGGGAAACCGTCGCGCAAACG
TGCCCAGCAGACGGTTCTCTCAGCTCGGTGCATTTCCGGGCCCCTGCGTG
CATCTAGAATACCATATGAATATGTAACGTTTCACAAGGTCGTATTGCTG
CCTCTATAATCGTTTCTGGTGGCTTGCTGGTGCTGTCAAAGCCGGGGATG
CCACTCACCCCAGCACATCGACAGGCTGTGGCAATTACGAGCAGCGTGGT
GGCCTTGCGACGAGCGTGCGCTTTCTGCAGCTGAAGCATGACTTATTTTG
TCTGTTCCATCTTCCCGATTTCTACGCGGAAGAGGGTGCTCAACGCCAAT
AGTGCGGGCACCTCGATCTCGCCCTTGAAGTTCTCCGCTGAGGAGCTGCA
GATGCAACCGACAGAGGCTTTCAAGCTGATGTAATTTTTGTGTCAACATA
TTCTCCGAAGTAGGGCTTCTTGTGTCCCAAGGCTTCAACAGGAGAGGGTG
CGATATGGAGCGTCCAGCATCCGGGGGGGGGGGGCGACGCGAAGGATTTT
TCATCTCAAAAAAGTTTGAAACGTGGGGGACAAATGTTCGACGAAGTGTA
CCATTGGATCCAAAAATACCATCAGGGAGCCCACCCCCACCCAGCGCGGC
CTCAAATCTGCTCTAGATCCTGGTCCGCAAACTTTTCAGGACGAGTAGGA
AGAAAAAAATAAAACGTCTCCAGCCACAGGTCGCGCAAACGTGCTGTTGC
TATAACTTCGAGATGTACTTAGTACGCTGGTAGGAACAACTGTATAGGGC
ACGGGCATCCAGACACATACAAGAAGGACTTCCGTGAACACAGCATGTCC
TCGGTGGGAAAACTATGAAAATTGCCCCCGTCTATCGTATGCTTTGAGTG
CAGGAGTGTACGATGATCTGCAAAACTTACCTCAACTCAAGGAAAATCAA
AGCTCCGGGCTCGTTCATCCTCGAGGAGTATCATCCAATCACCACACACC
TCAGCACACGCCACACACCTCGCAGGCGGTGACCCTGGAGACGTACGTAC
CGTAGAGGGCCCGGGTACAAACCCAGCAGCACTAGTGTGCACTCCTGTCG
CCCGCACTTGCGTGAAGCTTGCTATCTCTAGCTTGCACCACGCTTTGATT
CCATCACCAAGTGCCAGCGCAATGCCAAAGGCGGGTTGTGGCGTACGGTA
AAGTTCTGTGAAAATGACGCGATGCATACGCCGTGATCGACCACCGCGCC
TATCCACGGTATCGTACGGACTGTGTAGATATACGCCATCCATCGTGCAT
CAGGACACTCAAACACGAAGTTCTTGGAAGTAGTATGGTATATCACGGCG
TGTGTCTTGCGCGCCGACGTTACCGACTGACCCAAGGGTGTGTGCGTCGT
GTTATATTGTGTCGTGTTGTGCTTTTCGTGCTTCTTCGCGTCTTCCCATT
AACTCACTCGGCGTTTGGGCATCTAGCGTTACATGCTTCTCCCGTTGTAC
ATATGCATGGGGCGGACAGCAATACCATATTCCTCGTTGCGTGCCTGTCG
GCAATGGTGTCGGCTTGTTGATGAGGCTCAGGAAAAGCTGCGAGGCTCCA
CCTTTGGGTATCCGGTGATGAGGCATCTCCATTTTTAGAGGCCGAAGTGT
TGCACAGGGTTACAGAGGGAAGTTTCAAAGACCAATTGTGCAGGAGAAGA
AAGAAGACGGTTTCGGAGTATGAAGCTCATGCCGGCTGTAAGGTGATGAG
GTACCTACATTTCAGAGACCGAAGTGTTGCATAGGGTTACAGAGGAACTT
TTTTGAAGACCAATAGTGCAGGAGAACAGAGAAGATGGTCTCAGAGTGTG
AAGCTCGTGTCGCCTTTAAAGCAAAAAAGAGGGAGCGTGAGGAGATCTAG
ACTCCATGAAGCTCCCGGAGAGCCCCGAAGGATTTTTGACGACAACACCA
ATAAGCGCGGTGGGAGGGTCCAGAAGTGCTGTGTGATGGGAGATAAAAGA
GAGGGGGGGAGTGAGCACCTCTCTGTTTTCATGTTGGGAATAAGCACACA
CGGACCTTTGTTCCCGCCGTGATGCCTACCGACGAACGAACTTCCGAACC
TAACGTACAGTTTCCTCCACGTCCTTCTGCTGGTCCGAGGCATGTGCGCA
AGGTCCGACTAACCGCAGTCCTGAAGATTATTTCGACAGCAGTCTTCCCC
GTGCCAGTATTCAAAAAGTGGAAGTGATGTCTCAACCGATGTGATGCAAC
GTGACGCTGCTGCTGCTGTTGCTGTTGCTGCAGGCGTTTCTACTAGAACT
GCCTTTTCGTCTTGTCCGAAGAGACACACAGGAACAAGCACGAAGCAACC
TCCAAACGCCGTTTGTTGCATAATGTTCGTGCTCACGCAGGAAACGGTCG
GCCTCTTTCGTGGTGGAGGAAGCGCCCCAAGGCTTCAAGGTTGACGCTCT
AGGGATGGCGCACATCCTCAGAACCGAGTCGCTCACCGCCATCTGCCTTC
TCATCATTGCGTAAGAAGACAAGAGTGCCGACTTGTGCTGCGCAACTGCA
GTCAGTCAGTCAGCCATGCTGTATTTGTTGGTGCGTCTACCATACCAGAC
TCTGCTGTGAATGCGTAATTTGATCACCCCCCTCCCTCCCCCCCCCGCAT
CCCCCGCGCTCTACAACCCTTGTGATTGTTTCCCGTTGCTGGTTGCTTGA
TCGGTTGATGCTCGGTCATTCTTTCATTTCACAGCTGTTGTTGTTGTTGT
TGTTGTTGTTGTTGTTGTCGTTGCTGTTGTCGTCGTTGTAGTTGCTGTTC
TGTGTTTCGTGTGGTGTCGTCCTCGCTATGATGATGCTTTGTGTGTACGG
ACATGCGCGTGGGTGGGACGCCAACTCGATTGATTTGATGCTCTCGGTGC
GGACTGACTGATTCGGCAGGGCGTGCGCCCTCGGCTTCATGATGTTCTTC
CTGAGGACCATCTTGATTCCCTTCGCCATTGCTGGTAAGGATGTTCGGTG
GCTGGTCAGTGATCGTTTGGGACGTTTGGTTTGGTTTCAGAATTATTTTT
CTCGGAGGCGAGGGCGTGTATGGGGGCTAGGTGCAATACAAAAACTGGTC
TCACATATTCAATAAGTTTGACGTTGACGTCGGACGGATCTCGTGGTGCG
TTCACAAAACCTACATTGAAACCTACATTGAAACCTACATTGACAAGCTT
CAGGGAGGCAAGATTCCTTACATGCAACACATGTTATTAGGAGATCAAAC
AAAGCCTGGCAATGTCAAGATACAGGTATGGTATGTTATGTTTTACCTGA
TACTTCGAAGCATAGGTCGCCGGGTCGGACCCTCTCTCGCGACAAAAATC
AAGCACCGCAGCAGGAAGTTGAAAAACAAAACAGAACAAAACAAACACGA
AAGTTAAAAAAAAAAACATTTTCCTGTCTGTCGTGACCCCGGCTGGTGCG
TCCAACTTTTATCCCGAAAGGTGTACACTGGCGTCCGGAATAGACGGGGA
GACAACACACCACACATACAACATTGTTATTTCACCCTAATCTTTCTGCC
gtGTGTGTGTGTGTGTTTGTTTGTTTGTTTGTTCGTTCGTATCTTGTACC
TGACGTGTGCGTGGTGTCGGTCCCGCCGTGCTGCCACGCCGTCGCCTATA
ACGTCACGTCGCCACACGTCACGCGTCCCGGGCCGGGCAGTGTTCCTGAT
GTATCTCCTGCAGCCGATGGTGAACTACTTGTGCAAGCCGCCTAGGCGCT
GGTGCGACAAGTGCGTCAAGCGGCGGGGGGAGGTCTGCTTCGAGGGTTGC
TTCCGAGTCACCAAGGTGCGCGAAGGCGCCCTCAGCGGTCCGCGATTTGC
GCGAAGACCTGTCCTCCGGGAGGTTGCCGTCGTCTGCTCCTTACCTATAT
GGTCTCGATTGCAATTCTCTGTTTTTCTTTCTCTTTTTTTGTATATAAGC
TTGGCAAGTTTTTTTTATCGCGGCACGCACCTGGTGTCATGTGTTTGGCG
AGAAGGTGCTCTCCAGGCACGAAGATAGCGCAACTGCTGCTGCTGCTGTT
GCTGCTGCCTGCGCCCGTTTCTACAGTAGTCGTGTCGATTCCTGTCTCAA
ATTTGGGGCCGCCGGCTCGAAAGACGGAGGCACCCCACTCACAGCGCGGC
ATTGCCCTTTGCTTCTGCGGCTGGCACCAAATGCTGCTTCCATCTACCGT
GCGGGCTCTCTGCTGACGACATGGTCCCATGAACTCCCTCTACCCCGTCC
TCACGCGTGCATTTTTATCGGCGTTTTTGCTTTTTTTGTCCCGATAGTCA
CGAACATACAGCGCTCTGTCCCCCGAGGAAATTGTGGCGCTTGAGCTTGA
GTCGGCGCGCCCTGCCGAAGTTGCGCCGAGAGGGTGGGACTGCTTCAACA
GGCCCCTCGTCCCTCGGTGGCTGGCCGTCATACTCGCCAGTGCGTTTGTT
GTCGCCTACCCGCGGTTTACTGCTTGTCGTTGTCTTCGGCTGCTGCTGCT
GCTGCTGTGTTGTTGTTGTTGTTGTTGTTGTTGTTGCTTGTTGTTGCTGT
GGTTGTTGTTGTTGTTGTTGTTGTTGTTGCACTATTTAACGTCTCTTTTC
CTGAAGACCGACTGCACCTCTCATCCAAAGGTACTGCTCCACCCACCGCG
TTGTTGTTGATGTCGTACCCGAGCAGTTTCGGTGGTGCTGACGGCCCTAG
CTACCGTAGGAGCTATCGTGTACGGCAGCTTGCTAAACCTGCAGGACAAC
TTTGAGAAGTACGAGGTGAGAATGCATTGGTCACAATGGTAGCGGCAAAT
AAAATGATTCGTCCAGCTTTTTACGTTCTTCGTGCTTGCGTCTGTCTCCC
TGCTGCACATGCACGACCGTGTGTCCGCGGCGTGTGTGCTGTGACTCACT
GGCCGGCTGTCCTAGTCTGGCGGCTCCACGTCTACCTCAGGCGAGACGGC
GAGACATGCCGGGTCTGCTGTGCAGGGTTTCCACACCCTCTTCCAAGTGC
CTTCCCCTCTGCCCCCCCCCCCCTCTCTTGCACCCATGTTTTTGCATGTA
GTTTATCCACCGACAATCGATGCGTTCGACTCTGTGTGTAATATTTCGTA
CATATATCATCTACCAAGTCATGTGAAACTGTCACGCTGTGGAGTCGGTT
CTAAAATATTCATGACGCAAGCATCCCATCATGAGCATACTCTAATATTT
GTGCCAGATCTCCGAACGCTCAGACGGCACACCGACGTGATGATAAATTT
TCGGCAGATTGGCGCGAACCGGTTCGCCACCTACATTGACCGGTGGCTCA
TGAAGTACCACTACAGCATCGGCGAGGACTTCGTGCCCTACGTTTTGCAG
GGCTTGCGAGACCAGGTTCCTCGGGTGCTGAAGGTGCGGCCCGCCGTATG
CACAGCAGTACGGGACGACTGTAGTTAAATCGAACGACCACGTCTCCATG
ACAGTATTTCCACGAGGACTTTTTTTTTCAATATGTGATTTTGAAGTATT
TATTTTTTATTTTGGGTGGCCATGACACGGTGCGTGGGCCCGTGCTGCAA
GAAAAGGAAAGCCAGGAGGCAACGCGGGTGTTCAGTGTGTGAGGACTAAA
AACTACGCGTTTTTCTGGTTGCGTGGTGCATTGGTATTCTGTCTGCTTGT
GTGAGTTCCCCCCGCGCCGCCTGCTGTATGTGGGTGTATATGTGTGTGTG
TTTCTCCGCTGCTGCTGTTTTCGGCGAGCGAGGCATTTCGTTATTTTCTG
TACTTCTTGGTGCAGCCATGGTTACGTAACTGCCACTACTTCAGCATGTA
CTGCGTGCCGACCGTTTTTTTTTAAGACCAAGCTTCTGGATTTCATTTGC
ACCCTCTTCGTTCGTGGTTTTGGTGTTACGTCTGTGCATGCAGCCGAGCT
TTATACATCATCTTTCATACCATGCCATACCGTACCACACCACACCACAC
CACACCAGATCACATCATATCACGTCACACGATGTCAACAAACGATACTT
TTGGCGTGAGTTTATCGTTGTGTGCATCGTTCCAGCTCAAGTTTTCTCGA
CGATGTCGCCTGGTAGTACCATCGCGCTCTCCCTCATACGCTTCTCGCCC
TCCCACCTCTCGCCTTCGCTCGGTTCTGCGTGACCCCGTCCGTCGTGACC
CATCCGTAACCTTTCTGTCTGTCTGCCTGTCTGACTGCCTGTCTGTCTTC
AGGCGGCGCTTTCCTCTCTCCAATATTTTTGCCTCGTCGCGATCTTCCTT
GTTTACCTATTGATCAGGCAAGGTGTTTTTTTTTTTTTTATCCGTACAGC
AGTATGGCAACAGTAAGATTTACTCTGTTTGGTGCACTCACTGCTGTGTT
GTGCCTTCAGCTCCGTCGGGAGGGTTGATTTGCCCCCGCGAGGCGCCGTA
GTTCATGTATAGATGTGCACCCTCCTACTCTGAAATACTGCGCTGTGAAA
CGATGTTTGCGTGAGCGGGTCTCGATGGAGTTCGCCCTCGGTGTCTTGTC
ACTCACACGAAAACGTGTTTTTTTTTTTTTGTGGTCCCTCGTGCCGGCGT
TGTATCTCTCGGGGCCGGTTCTCGATTTGGTGCGGTTCGGGAAACGAACG
ATGCGCACGACATTTCGATCCCCGTTGTCATGCCGTTGTCGTCGTCAAAT
CAGCCCCGTAAAGCCGATCAAGTCTTCGGTGTGGGGCATCATCGATCTTC
ACATCCGGCGTTACATCAGGCTCAAAACCATGGTATGATGATGTAATGAT
GTCCGTGCCCCAAGGGTGTGTGCGAAGTGTGTGTGGTGTGTTGTCTCCCC
CCTCTGTTCTGGATGCAAGTGTACTCCTTTACGTATATGGTGGCGCGTCA
GCCGGGGTCACAGACGCGGGAGGTCGCACAGGAGTTTTTTGTCAAGAGCA
ACGACGAAGTATCGAGATTAGTGCGTGTTTCTCTGTACAACATGCGAGTT
GCTTCGTACCGGTATGGCACCCAAGATTTTGTGTATCTAAACACCCACTG
CTGGACCGACTCCTTAAGCGCAGTTGCTCCACAATTGTGAAGAAATTTCA
ACACTAATGGCAATGATTTGATTGTGCTCTATGCATGACCCTCTCATACT
CATCCACGCACGCACCCATCCACGGGGCCACCATCCCGGCGCTGTCTTAT
CTGGGTTTCCTGGTGACAGGTGGGCGTCTTGGCGGCGACTCTGGTTACGG
CGATCCTGTGGGTCCTCGGAGTGGAGATGGCCTACGTGTTCGGCATCATC
ACTTTCGTGCTTAATTTTGTTCCCAACTTGGGAGCCATGATCGCCACGTT
CCTGCCCATGCCCCTTGTGATTTTCGACCCCGGTGAGCTAGCCACGCTAC
CAGCGCTGCGCGTCACGGTTGTTTTATTGTGCAGTGAACTGATGTTGTGG
CGATTTTTTGACAAACATGGAAATCACCGGATTCGGATTTGGTTGATCGA
CCGTTCAGGTTTGCGGCATCATTTCTCTCATCTTGTGGGGCTCATGAATC
CCACGGCAAGGTATGCCTGCTTCTTTTTCGTCTACCTGTTACTGTACTTG
GTCGCATCGCCGACGACTTTTTTGCCATGGCTTGCGTTTGTTGGTATTCA
ACAGCCGGCCGGTGCTCTCTCTCTATGTTTTTTTTTTTCGCCACCTTTTC
CCTCAGAAGGAGGGTGGTCGGTGCGCAGGGTGAAGTGAGGAGATTCGCTG
CCTTGGCTCTGCGCGATGTCTGTGATGCGATGCCCTCTCACGGCTACGGC
TGTCCCCCTTGATCACCGCTACTGCTTAAACGAATTTTTTTCTTTAATCC
TCCATCCTGCCCCCCTCGATGTGACCACGCCCCCTCTCTCGCGCCTCCCC
TCAACGAACAACAGGCATGTCGCACCTCAACCAAGTCCTTGCCTTCCTTC
TCCCCACCACGGTGAGCTTGTTGTGAGGGTCAAATTGTCACTCGCGACAA
AAATGGCAGAGACGGCGCTCTAACCGGCTGCCTACACGAACTGCACGAAG
GCGAAAAACCAATGTATGTTTTATAAGCCGGGGGTCCACCCCTGGGGGGG
GGGGGGGGCACGGTACAGGGTGAACGGAATGCTTGCGGTTGATCTGGTAC
AGAGCGTGTACTTTTTTCCCGGGGCGACGAGGCAAGGGGGTCCACAACGG
CAGAGGCGAGGGATTTCCAACACCCCGCGCTACGGAGAGAGGGAGAGGGA
GGGAGAGCTGAGCACGTTATGCTGCCGGTGTCGGTCGACGCGTGTATGAT
ATACATGCGTTCGTTTTTCTCCCGTGTCATCGATTGTTACGCGCATGTTG
TGCTCCCTTTCGTCTGTTTGGGTATATTCCCGCTGTATTCTCCCTCTGGC
GTGTTTGGTCGCCCCAGTCCCGGCTGACTCTCCATGCGCCTCCACTGGTG
TCCGTTTCGTCTCAGGCGCACCTCGTGGTCGGAAACTTGATCGAGCCCGG
ACTGTTCGGGGAGTCGTTCGAGCTGTCCCCTGTCGTGGTTCTGCTCTCCC
TCGCCTTCTGGGGCTCCTTGTGGGTGAGTTTTTTCTTCCGCCGACATTCT
TTTTTTTAAGTACAGTTGATGTGCAATTTTTTTTTAAGTTTTCACATACT
TCGAAGTATGATATTAGGGCAAGCAACCGCCGCTCTCCTCGCCCCCCTGT
GCATGTTTTTTTTCGTGTGTGTGTGTGTGTGTGAGTGTTTTTTTTTTCGC
GGTTTTAGGTTGGACGTGTCGTGGTGCTTTCACGGAACTCAGCAGCACAG
GCTACGCCCACGTTAGACGCTGCCATTTCGCCTCGTCCTACCCACCCACT
CACTTACCCGCTCTCGGCAGTTCGTGCTGGTGGACTCGTGAGTCTTGCGG
TCTGAATCAAGCCACCCTTTCCTTCCTTCCGATTTTTGCGACGCCGAGTT
CGTTTGTTTATTTCACTCATTTTTGGCTTTTTTGCGCGGACTTTTTCGCC
CCATCTTCTTCCGCTTTTCTTCCGACCAACCGATGCTGCTGCACAGGGGA
TTCCCGGCACGATTTTGGCAGTGCCCATGGTAGTCATCGCGCGGATCGTG
TGCGACCACCTGGATCACCCGTACGCGAAGACCTGCATGCGCTTGCTCGA
GGGCAACGTCTTCGAGGTGCGTCGCGATTCCTTTATTTTTTCTTTTTCTA
TCGACAGCCCCTCCTGTGTTTTTGTGCGTATGCTTGACTCGATCGATCGG
GTATGGCTTTCGTTCCCCGTGACAGGCAACGATGGCTCTTGAAAGAAAGC
AGGTGAGATTCTATGTACTTGGTACAAAGATCCATTTTGTCATCAGCGAA
GCATGCAAGGCGGTGCCTCCCCCTCCCCGCCCCCCCTCGCAAAACCACAA
TGTTCAGAGAGTCCCTCCCCCCGCTTTTCAATAACCCGGCGTCTCCCTTC
CTCCGGGGTCACTTACCTCAATACTTTATCTCTTCTTCTTCTTCCCAGGC
TCGTGAGGACGACACCTTGATACCCAACTGGAACAACGGCGCGGGCGGAA
GCGCCAGCAGCGTGGTGAGCATGTTCGGGGGGAACGACCGCGCGGACGAG
GCCTTGGCCGCGGCGGAGGTAGGGGTCGGCCGGCGAAATCAAAGACTCCC
GGCTGAATCAGCTCCTGGGAAGAGACAGGAGGACAAGCGAAGATACGGGA
CCGGCGCTTGACCTTTTTCATATTTTGTTTCTCTGTGCCACGCAAGGCCG
TTTTGTTTTGGCTGGTAATGTTGAGCATCAACATGATGGTGAGTCTCAAC
GGCCAGCCCGCATTTTGTTGTTTTTTTTGGGGGGGGATTTACCACCGGGC
TATAACCTTGTACAAGTGGAGTCTTATAGCGCCACATTCATTGATGTTTG
GTGTTTCGTCGATTTGTCTTTTATCGTTGCACACGGCAGTATTGCTTACC
AGTGTATGTTTTTTTTTGTCTCGTATGGTTTGACAATAAAAGACATGTGG
GGAGTATCGGTGTGAGCATCCGCCACACTTCCGCTGTGCTGTCGTTACGT
TGAGGGTGTGGGTAGTGTTGTCATCTTGTAATTGGCAATTGATCAAAGCA
ATTTTGGTGTCGAAGCCTGCTGCGTTGATGTTGACGTTTTTTTTCCGAGT
GCCTTCTCCGCACTTGATGCAGGTTGCGGGTGTCTATATTTTGGGGGGTT
GTGGTGTTCAGTATCGGCTTATGAACGCCGCAGGTAGGTTACTACCGTAT
TCGACGATTAGAGAGGGCTTGTGGTTTTCTTGTGTGCGCGAGATTCGAGA
TCACTCACATCCAAAATGTAAACAGAAAAAAATCCCTTTCTCCACCTGGA
CCCCGGGGTTTAGCACAATCAGACATTATTGTTTAAGCTAACACACGTGT
TACTAGAAAAAGCCGGCCCGGTGAGTGTTGCGCTTCGACTCAGTCCACCG
GTAGCTCAGAGATGGATGTTGACAACTTGGTCCTGGAAACTTTGTTTTTA
GGTCAGGACGTGTGCTGTTGGTTAATGACATGTTCATAAACAAAACATCG
CGTCGGTCTTTTTTCCTGCTGTAACTTTGTCGGGATCTGGTTATCATAGA
TAGCCCTTTCGCAAACATACGAGACTGAATAGTGAGGACGACTTTTCTCG
CCGAGAGTTCATGATCCGAAACGGGGCAACTCAAAATTCTTGACATGCCG
TTCGCTTGTCGTTCCTGCGGCTTTTGGGGTCTTGATTTACCACGCTGGCG
GTGTCATGTGATTTTTTTCTGTATTTGGATGGGGGCTACCATTCCATTTC
CCGGGGTGGGGTTTGCCGGCACGCCTTGGGGTACGCACAAGCCGTACATC
GTGTGCATAGTTTGATAATTGTGGGGGGGGAAAAAATGATACGAAAAAAA
GAAAAAAAAGGAGCTTTGATTGCCCTGAGGGTGCGCGCCAACTAGTGTGT
TACCCCAGGTCGGGATCCAAATCTGGACCCATCTTCTTGAGCATTGCCTT
GGGTGCCGGGCAAGGCAGCAGGGAGAGATGGGCGCGCGGAAGGAAGCGTG
GCATGGCGGGACCGTGGGCGTTCCCACGACAAAAGTACGCGGGGCTGGCT
ATTTGTTCTTTCGCGCTCACCAGATCGCTTAACAAGCAGGACGTCCATGG
TTGTGAAGGCAAACAGGTAATACTCTGTACATGCGCAGTGCACAAGAGTT
GTGGTCGAATTTCTCGGAAAGTTGGGGTGGAAGAAGCCATTCACATTTTT
CCAGAGACCCGCTTATTTTTATTTCTCGGTCCAGCTTGCGTTCAATTCTC
ACGCCAAACATGGCGTGCTTCCTGCACAAACGTCCACAATACCCGTCTTC
CAGGAACCCCCATCTTTGTAAAAACTAGCCCGTGAGATTCACTCCAAAGC
TTTCACAAGACTCGGGGGGAACTAACCGCTTTGTTGACTTTTGTACGATA
CATCA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig7:867691..881845+

>mRNA_P-littoralis_Contig7.223.1 ID=mRNA_P-littoralis_Contig7.223.1|Name=mRNA_P-littoralis_Contig7.223.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1524bp|location=Sequence derived from alignment at P-littoralis_Contig7:867691..881845+ (Pylaiella littoralis U1_48)
ATGGCGTGGCCACCATGGGCACCTCCGGGGGGGTCTGGTGGGAATATCTC
ACCTCACTCAAGGAAACGGTCGGCCTCTTTCGTGGTGGAGGAAGCGCCCC
AAGGCTTCAAGGTTGACGCTCTAGGGATGGCGCACATCCTCAGAACCGAG
TCGCTCACCGCCATCTGCCTTCTCATCATTGCGGCGTGCGCCCTCGGCTT
CATGATGTTCTTCCTGAGGACCATCTTGATTCCCTTCGCCATTGCTGTGT
TCCTGATGTATCTCCTGCAGCCGATGGTGAACTACTTGTGCAAGCCGCCT
AGGCGCTGGTGCGACAAGTGCGTCAAGCGGCGGGGGGAGGTCTGCTTCGA
GGGTTGCTTCCGAGTCACCAAGTCACGAACATACAGCGCTCTGTCCCCCG
AGGAAATTGTGGCGCTTGAGCTTGAGTCGGCGCGCCCTGCCGAAGTTGCG
CCGAGAGGGTGGGACTGCTTCAACAGGCCCCTCGTCCCTCGGTGGCTGGC
CGTCATACTCGCCATTTCGGTGGTGCTGACGGCCCTAGCTACCGTAGGAG
CTATCGTGTACGGCAGCTTGCTAAACCTGCAGGACAACTTTGAGAAGTAC
GAGATTGGCGCGAACCGGTTCGCCACCTACATTGACCGGTGGCTCATGAA
GTACCACTACAGCATCGGCGAGGACTTCGTGCCCTACGTTTTGCAGGGCT
TGCGAGACCAGGTTCCTCGGGTGCTGAAGGCGGCGCTTTCCTCTCTCCAA
TATTTTTGCCTCGTCGCGATCTTCCTTGTTTACCTATTGATCAGCCCCGT
AAAGCCGATCAAGTCTTCGGTGTGGGGCATCATCGATCTTCACATCCGGC
GTTACATCAGGCTCAAAACCATGGTGGGCGTCTTGGCGGCGACTCTGGTT
ACGGCGATCCTGTGGGTCCTCGGAGTGGAGATGGCCTACGTGTTCGGCAT
CATCACTTTCGTGCTTAATTTTGTTCCCAACTTGGGAGCCATGATCGCCA
CGTTCCTGCCCATGCCCCTTGTGATTTTCGACCCCGGCATGTCGCACCTC
AACCAAGTCCTTGCCTTCCTTCTCCCCACCACGGCGCACCTCGTGGTCGG
AAACTTGATCGAGCCCGGACTGTTCGGGGAGTCGTTCGAGCTGTCCCCTG
TCGTGGTTCTGCTCTCCCTCGCCTTCTGGGGCTCCTTGTGGGGGATTCCC
GGCACGATTTTGGCAGTGCCCATGGTAGTCATCGCGCGGATCGTGTGCGA
CCACCTGGATCACCCGTACGCGAAGACCTGCATGCGCTTGCTCGAGGGCA
ACGTCTTCGAGGCTCGTGAGGACGACACCTTGATACCCAACTGGAACAAC
GGCGCGGGCGGAAGCGCCAGCAGCGTGGTGAGCATGTTCGGGGGGAACGA
CCGCGCGGACGAGGCCTTGGCCGCGGCGGAGGTAGGGGTCGGCCGGCGAA
ATCAAAGACTCCCGGCTGAATCAGCTCCTGGGAAGAGACAGGAGGACAAG
CGAAGATACGGGACCGGCGCTTGA
back to top