|
|
Homology
BLAST of mRNA_P-littoralis_Contig7.193.1 vs. uniprot
Match: A0A6H5K2V6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2V6_9PHAE) HSP 1 Score: 905 bits (2339), Expect = 6.640e-312 Identity = 548/892 (61.43%), Postives = 606/892 (67.94%), Query Frame = 1
Query: 388 PRTPSARFSQDVSSGMKARTWVEEVIGRSLPEGDFAAAFKDGVGLCELVNVLRPGTITKIEKSASPFHQMANISCFLRACRAVGVREQALFETLDLFNENRLSQVMRCLFSLSELARAKMPSYSGPYLAPPEKPQVDPAVLHLVDISKGKVLPAPGWGGGPVTPGGVSIASTGGASS--------GGPAAQILSLP-NPIEEEFTSSGRCLSPAAHKAGQLTYGIYEGGGITT------AASPLPRSPVSGKARWRQAKEKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATETLQLRAQDRDVGGAGKDESHRVAATV--AGSALPAVNSPRAGAVPAAGAALSGEPASGGWKRVTVPSPRDGGGSXXXXXXSLGG------------KSSVEDQAKRRREATARIDTEMEVALWIEGTTGETFPGKFWSSLKDGVLLCKLLNSIKPGLVPHINTSRGTFPELENISAFLGGCRKVGVAEHSLFDTKDLHEKRDMQVVVHCLHVLGAAVQSTVPEFNGPFLGKKSDALSIVNARGLRKRLGKGPGARGGILTLTAHKGGAGEHISSGDLPIEHPDPTATMTPAESPSAKWA-RRREPSDAGESGG--GKGAPASPRAMAEGLSGALLPAVILEEET--GMAPTVVRVEREGRRGARVVEEPNGGG-GRRNLAGLFAGSGRPGAPHEGXXXXXXXXXXXXXXXXRTVSGTNGVSXXXXXXXXXXXXXXXX-----DEGEGVASQIQRFVELHTQQPWRVSGDMHESLRDGWQLALLANALRPGAVRRVHNSIQPAKQVQNIASFLIASRRMGVARVLLFDIEDLYENKSQTKVARTLLALRALAADPDFASARPSSLMGTSLLVTAAALA-KERQVKGPASTTSTDLRR 2940
P TPSARF++D S+G+KAR WVEEVIGR LPEGDFAA FKDG GLCELVN RP +I KIE+SASPFHQMANIS FL+ACR +GV E LFETLDLFNENRL QV+RCLFSLSEL R MPSY GPYL P+KP+VDPAVLHLVDI+KG V+PA G V P G S S+ S + LSLP + E+ TSS RCLSPAA++AG+LTYG+YEGGG A + PR+P G AR + + + A+ ++ G ++ S V A SAL N+PR + P + G + P GGG XXXXXX G SSVEDQA+RRRE TA+ D EMEVALWIEG TGETFPGKFWSSLKDGVLLC +LNSIKPGLVPH+N SRGTF ELENISAFL GCRKVGV EHSLFDTKDLHEKRDMQVVV CLHVLGAAVQSTVP+F GPFLGKKS+ALSIVNARGLRKRLGKGPGARGGI TLTAHKGGAGE++ SGD+PIE PDPTATMTPAESPS K A RRRE SD+ G G PASPRA+AEGLSG +LPAVILEEE GM VVRVER+GRRGAR EE G GR+NLAGLFA + P EG RT SG +GVS ++GEGV SQ+QRFVELHT+QPWRVSGDMHESLRDGWQLALLANALRPGAVR VHNSIQP K +QNIASFLIA RRMGVAR LLFDIEDLYE +S T+VARTLLALRALAADPDFA ARPSSLMGTSLLV AAA A K GP S S RR
Sbjct: 22 PSTPSARFARDASAGLKARHWVEEVIGRRLPEGDFAAGFKDGQGLCELVNTFRPASIPKIERSASPFHQMANISSFLKACRMLGVSEHVLFETLDLFNENRLPQVVRCLFSLSELVRTTMPSYHGPYLGAPDKPEVDPAVLHLVDIAKGNVVPAAG-----VAPAGASATSSCKKGSRXXXXXXXXXAGLEPLSLPKHDGEDGATSSRRCLSPAAYEAGKLTYGVYEGGGXXXXXXXXXAPAKPPRTP--GAARTARLRAARTPGPDDACVVSGAQAAGRGTTDAQRWQAQEPASAAALGGKRNGGAGAVTREGSEGGGGVVEYAESALSVANTPRR-----CNPMIMPSPRAEG---ASTPRGEVGGGXXXXXXXXXXGAVASDYYGFGRSSSSVEDQARRRREVTAQHDAEMEVALWIEGVTGETFPGKFWSSLKDGVLLCNVLNSIKPGLVPHVNPSRGTFLELENISAFLSGCRKVGVPEHSLFDTKDLHEKRDMQVVVRCLHVLGAAVQSTVPDFRGPFLGKKSEALSIVNARGLRKRLGKGPGARGGIHTLTAHKGGAGEYVGSGDVPIEQPDPTATMTPAESPSGKRASRRREASDSAGGSGVVAAGTPASPRAIAEGLSGGVLPAVILEEEAPAGMTSAVVRVERQGRRGARAAEEAGAGSSGRQNLAGLFADAALAADPREGGGRGGAVALR------RTTSGASGVSGSQQRRSRGAHRQLQHQQRKDEDGEGVVSQVQRFVELHTRQPWRVSGDMHESLRDGWQLALLANALRPGAVRCVHNSIQPVKHIQNIASFLIACRRMGVARALLFDIEDLYEKRSNTRVARTLLALRALAADPDFALARPSSLMGTSLLVNAAAAAAKTGLASGPPSAASAGGRR 892
BLAST of mRNA_P-littoralis_Contig7.193.1 vs. uniprot
Match: A0A6H5L3X7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3X7_9PHAE) HSP 1 Score: 169 bits (428), Expect = 2.660e-40 Identity = 156/500 (31.20%), Postives = 216/500 (43.20%), Query Frame = 1
Query: 400 SARFSQDVSSGMKARTWVEEVIGRSLPEGDFAAAFKDGVGLCELVNVLRPGTITKIE--KSASPFHQMANISCFLRACRAVGVREQALFETLDLFNENRLSQVMRCLFSLSELARAKMPSYSGPYLAPPEKPQVDPAVLHLVDISKGKVLPAPGWGGGPVTPGGVSIASTGGASSGGPAAQILSLPNPIEEEFTSSGRCLSPAAHKAGQLTYGIYEGGGITTAASPLPRSPVSGKARWRQAKEKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATETLQLRAQDRDVGGA--GKDESHRVAATVAGSALPAVNSPRAGA-VPAAGAALSGEPASGGWKRVTVPSPRDGGGSXXXXXXSLGGKSSVEDQAKRRREATARIDTEMEVALWIEGTTGETFPGKFWSSLKDGVLLCKLLNSIKPGLVPHINTSRGTFPELENISAFLGGCRKVGVAEHSLFDTKDLHEKRDMQVVVHCLHVLGAAVQSTVPEFNGPFLGKK 1884
SA + D+ + ++A WVE+V G EGDFA +DGV LC+L+N ++P ++ +I K F QM NIS F+R CRA+GV E +LFET+DL+ + V++CL +L + P + GP+L + P V V + + A ++ + GGA R +S +R+ + + XXXXXXXXXXXXXX + GGA G + H +SP G +GA + P++ GG ++ + RREA WIE TGE F F LKDG LC L+N IKPG V +N SR F ++EN+S FL CR VGVAEHSLF+T DL+E +D+ +VV CLH LG VQ++ PE+NGP LG K
Sbjct: 10 SAGYGGDLQAEVQA--WVEQVTGEPF-EGDFADGLRDGVRLCKLLNTIKPSSVRRINPFKEGQKFKQMENISNFIRGCRAIGVPEYSLFETVDLYEGKDVGLVVKCLHALGGTVQKNCPEFGGPHLGLKPVSRAPPRVAAAVPTAAARAPQAFDH---------AAVKANGGA---------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYRDDLS--SRFTETVQVTGSSXXXXXXXXXXXXXXSHSGPAANGSCRHTSGSKSPPHRPAPPYGGAVIGNGQQHSARPQSPARPYKKSSSPTNGVRQQVSGAPRAVSPSAPPXXXXXXXXXXXXMPPRRSPTGGRGGGYGLDAELAARREANYDXXXXXXAQEWIEDVTGERFAEGFGEELKDGRKLCLLINQIKPGAVRRVNDSRMPFKQMENVSNFLKACRAVGVAEHSLFETVDLYEGKDLGLVVRCLHALGQTVQNSCPEYNGPRLGIK 480
BLAST of mRNA_P-littoralis_Contig7.193.1 vs. uniprot
Match: A0A8K1CMC3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMC3_PYTOL) HSP 1 Score: 159 bits (401), Expect = 2.770e-36 Identity = 157/580 (27.07%), Postives = 225/580 (38.79%), Query Frame = 1
Query: 406 RFSQDVSSGMKARTWVEEVIGRSLPEGDFAAAFKDGVGLCELVNVLRPGTITKIE-KSASPFHQMANISCFLRACRAVGVREQALFETLDLFNENRLSQVMRCLFSLSELARAKMPSYSGPYL----------------------APPEKPQVDPAVLHLVDISKGKVLP----------APGWGGGPVTPGGVSIASTGGASSGGPA------AQILSLPNPIEEEFTSSGRCLSPAAHKAGQLTYGIYEGGGITTAASPLPRSPVSG--------------KARWRQAKEKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATETLQLRAQD---------RDVGGAGKD--ES----------------HRVAATVAGSALPAVNSPRAGAVPAAGAALSGEPASGGWKRVTVPSPRDGGGSXXXXXXSLGGKS--SVED-----QAKRRREATARIDTEMEVALWIEGTTGETFPGKFWSSLKDGVLLCKLLNSIKPGLVPHINTSRGTFPELENISAFLGGCRKVGVAEHSLFDTKDLHEKRDMQVVVHCLHVLGAAVQSTVPEFNGPFLGKK 1884
R+ D+ +AR WVEE+ G + + DF +DGV LCELVN + PG + ++E KS PF M N+S FLRACRA+GV E LFET+DLF L V+RC+ +L + P + GP L AP Q + D+ K L P + + + + A+ P AQ +P P+ + S G S + ++ + T+ P P + + G W +A + T+ + + R +G D E+ H + T+ +P P G + + A VP +GG S S S D RR + E E LWIE GE F F SLKDGV LC L+N+IKPG+V + + F ++ENI+AF+ CR +GV E LF+T DL E +++ +VV CLH LG +Q T+PE+ GP LG K
Sbjct: 25 RYDYDLED--EARYWVEEITGMEIGD-DFGEGLRDGVILCELVNKIHPGVVKRVETKSKMPFKLMENVSGFLRACRAMGVNEFELFETVDLFELKDLGLVVRCIHALGRATQKNYPDFKGPTLGVKESSKNERQFSEEQLAEARNAPSFIAQGSVRTMERADVRKANDLTFGAEAMRSSHRPXXXXXXXSAEKIEMVARARAAPPSPPRSFSRLAQPDGVPTPVTG-WPSGGAGWSQSGDSVDAVSNAMAN----TSVEEPSPSAGLVGLNSSRNLGPTPEEEAQEWIEAVLGEKFTEPFGESLKDGVKLCNLVNTIKPGIVPKVQVSTMPFKQMENITAFIKACRTIGVMEFDLFETVDLFELKNVDLVVKCLHALGRTIQ-KTMPEYTGPTLGVKESTENKRTFSDAQLKVAAAAVPLLAEGGRDILERRDSAQSASVASAADAPTVVHVSDRRMTISAGSPEEEAQLWIEAVLGEKFTEPFGPSLKDGVKLCSLVNTIKPGIVAKVQVTTMPFKQMENITAFIKACRTIGVMEFDLFETVDLFELKNVDLVVKCLHALGRTIQKTMPEYTGPMLGVK 595
BLAST of mRNA_P-littoralis_Contig7.193.1 vs. uniprot
Match: A0A836CGB8_9STRA (Calponin homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGB8_9STRA) HSP 1 Score: 140 bits (353), Expect = 8.670e-34 Identity = 71/131 (54.20%), Postives = 93/131 (70.99%), Query Frame = 1
Query: 1498 AKRRREATARIDTEMEVAL--WIEGTTGETFPGKFWSSLKDGVLLCKLLNSIKPGLVPHINTSRGTFPELENISAFLGGCRKVGVAEHSLFDTKDLHEKRDMQVVVHCLHVLGAAVQSTVPEFNGPFLGKK 1884
A+ R+A A D E A WIE T F G F ++LKDG +LCKLLN+I+PG V INTS F ++ENISA+L GCR +GVAEHSLF+T DL+E++D+ +V+ CL LG+ +QS+VPEF+GP LG K
Sbjct: 13 AELARKAAANYDYAGEHAAQEWIEAVTRVKFEGTFAAALKDGSVLCKLLNAIRPGTVKKINTSSMPFKQMENISAYLKGCRALGVAEHSLFETVDLYEEKDISLVIKCLFALGSTIQSSVPEFHGPHLGAK 143
BLAST of mRNA_P-littoralis_Contig7.193.1 vs. uniprot
Match: D7FJ16_ECTSI (Calponin-homology (CH) domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ16_ECTSI) HSP 1 Score: 138 bits (348), Expect = 5.390e-32 Identity = 68/127 (53.54%), Postives = 87/127 (68.50%), Query Frame = 1
Query: 1504 RRREATARIDTEMEVALWIEGTTGETFPGKFWSSLKDGVLLCKLLNSIKPGLVPHINTSRGTFPELENISAFLGGCRKVGVAEHSLFDTKDLHEKRDMQVVVHCLHVLGAAVQSTVPEFNGPFLGKK 1884
R+REA E + WIE TGE G F +L+DGV++CKL+N+IKPG V IN SR F ++ENIS FL CR +GVAEHSLF+T DL+E +D+ +VV C+ LG+AVQ T PE+ GP LG K
Sbjct: 19 RQREAKYDHSAEDQARAWIEAVTGERVVGPFGDALRDGVVICKLVNTIKPGAVRKINESRMPFKQMENISNFLKSCRAMGVAEHSLFETVDLYEGKDIGLVVRCIFALGSAVQGTCPEYTGPTLGAK 145
BLAST of mRNA_P-littoralis_Contig7.193.1 vs. uniprot
Match: A0A835ZHQ8_9STRA (Calponin homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHQ8_9STRA) HSP 1 Score: 136 bits (342), Expect = 7.350e-32 Identity = 68/125 (54.40%), Postives = 88/125 (70.40%), Query Frame = 1
Query: 1516 ATARIDTEMEVAL--WIEGTTGETFPGKFWSSLKDGVLLCKLLNSIKPGLVPHINTSRGTFPELENISAFLGGCRKVGVAEHSLFDTKDLHEKRDMQVVVHCLHVLGAAVQSTVPEFNGPFLGKK 1884
A A+ D E E W+E TG F G F SSLKDG LLC+L+N+IKPG + IN+S+ F ++ENIS FL CR +GVAE+SLF+T DL E++D+ +V+ CL LG+AVQS+ PEF GP LG K
Sbjct: 18 AAAKYDFEGERTAQEWMEAVTGVKFEGSFASSLKDGTLLCQLINAIKPGTIKRINSSKMPFKQMENISNFLKACRTLGVAEYSLFETVDLFEEKDVGLVIRCLFALGSAVQSSTPEFAGPHLGAK 142
BLAST of mRNA_P-littoralis_Contig7.193.1 vs. uniprot
Match: A0A814CUG7_ADIRI (Hypothetical protein n=2 Tax=Adineta ricciae TaxID=249248 RepID=A0A814CUG7_ADIRI) HSP 1 Score: 141 bits (356), Expect = 1.370e-31 Identity = 138/497 (27.77%), Postives = 204/497 (41.05%), Query Frame = 1
Query: 415 QDVSSGMKARTWVEEVIGRSLPEGDFAAAFKDGVGLCELVNVLRPGTITKIEKSASPFHQMANISCFLRACRAVGVREQALFETLDLFNENRLSQVMRCLFSLSELARAKMPSYSGPYLAPPEKPQVDPAVLHLVDISKGKVLPAPGWGGGPVTPGGVSIASTGGASSGGPAAQILSLPNPIEEEFTSSGRCLSPAAHKAGQLTYGIYEGGGITTAASPLPRSPVSGKARWRQAKEKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATET-----LQ-LRAQDRDVGGAGKDESHRVAATVAGSALPAVNSPRAGAVPAAGAALSGEPASGGWKRVTVPSPRDGGGSXXXXXXSLGGKSSVEDQAKRRREATARIDTEMEVALWIEGTTGETFP-GKFWSSLKDGVLLCKLLNSIKPGLVPHINTSRGTFPELENISAFLGGCRKVGVAEHSLFDTKDLHEKRDMQVVVHCLHVLGAAVQSTVPEFNGPFLGKK 1884
+D + +A+ W+E VIG P G + A KDGV LC+L+N L+PG I K S F NIS F A RA G+ + LF+T+DLF ++ + QV +C+F+L A+ K ++GP L P +++ + S+ ++ G T G ++ + G A L ++ S+GR PA + + + E + + RS + R+ E+ LQ L RD + D+ R+ A++ S G V + + PS D + GGK + E + E WIE GE FP G + +LKDG++LCKL+N ++PG V I T G F EN+SAF R G+ + LF T DL EKR++ V C+H LG Q FNGP LG K
Sbjct: 22 RDPNIDREAQEWIEAVIGEKFPSGSYEDALKDGVILCKLMNKLQPGAIPKYATSGGSFKLRENISLFQNAARAYGLGDAELFQTIDLFEKHNIPQVTQCIFALGRNAQKK--KFNGPTLGPKMSD------VNVREFSEDQLRA------GQATLGLLNEGMSKGTIEDPRAVSDQLLAEKMQMSLRSTGR---PARSETASASSEMSES---SVLFNDYTRSHGGRRLSQRKLSNSSVTNLLINLQNIRIPSTSSQTYLDNQHHQGDEDDESDDDNHLQTLIDLARDTESSRSDKLQRLHASLEDSI---------GIVELLSLL----------RFIKSPSSEDILYTVRLIVSMSGGKRNPE--------------LDKEAQQWIEAVIGEKFPSGSYDDALKDGIILCKLINKLQPGSVAKICTQGGGFKLRENVSAFQNAARAYGLPDAELFQTVDLFEKRNIAQVTQCIHALGRQAQRK--NFNGPSLGPK 463
BLAST of mRNA_P-littoralis_Contig7.193.1 vs. uniprot
Match: A0A7R9YD67_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YD67_9STRA) HSP 1 Score: 138 bits (348), Expect = 3.400e-31 Identity = 69/128 (53.91%), Postives = 87/128 (67.97%), Query Frame = 1
Query: 1471 GGKSSVEDQAKRRREATARIDTEMEVALWIEGTTGETFPGKFWSSLKDGVLLCKLLNSIKPGLVPHINTSRGTFPELENISAFLGGCRKVGVAEHSLFDTKDLHEKRDMQVVVHCLHVLGAAVQSTVP 1854
GG ++ Q + R D E EV WIE TGE FPG F SLKDG +LCKL+N+IKPG + INTS+ F ++EN+S FL CR +GVAEH LF+T DL+E +D+ VVV+C+H LG AVQ TVP
Sbjct: 291 GGGYGLDAQLAQIRLDKYDYDLEAEVKEWIEAVTGEAFPGGFGESLKDGRILCKLINAIKPGSIRIINTSKLPFKQMENVSVFLRNCRALGVAEHDLFETVDLYELKDLGVVVNCIHALGGAVQKTVP 418
BLAST of mRNA_P-littoralis_Contig7.193.1 vs. uniprot
Match: A0A0W8CZ75_PHYNI (Luc7 protein 3 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CZ75_PHYNI) HSP 1 Score: 137 bits (344), Expect = 5.330e-30 Identity = 65/126 (51.59%), Postives = 83/126 (65.87%), Query Frame = 1
Query: 1537 EMEVALWIEGTTGETFPGKFWSSLKDGVLLCKLLNSIKPGLVPHINTSRGTFPELENISAFLGGCRKVGVAEHSLFDTKDLHEKRDMQVVVHCLHVLGAAVQSTVPEFNGPFLGKKSDALSIVNAR 1914
E E WIE GE F F SLKDGV+LC L+N IKPGL+P I TS F ++EN+SAF+ CR +GVAE LF+T DL+ ++++ VV C+H LG +Q T+PE+NGP LG K S VN R
Sbjct: 292 EEEAQEWIEAVLGEKFLASFGDSLKDGVMLCSLMNKIKPGLIPRIQTSSMPFKQMENVSAFVRACRSIGVAEFDLFETVDLYNQKNLGQVVQCIHALGRTIQKTMPEYNGPLLGVKE---STVNPR 414
BLAST of mRNA_P-littoralis_Contig7.193.1 vs. uniprot
Match: W2NFZ0_PHYPR (Uncharacterized protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2NFZ0_PHYPR) HSP 1 Score: 137 bits (344), Expect = 9.680e-30 Identity = 65/126 (51.59%), Postives = 83/126 (65.87%), Query Frame = 1
Query: 1537 EMEVALWIEGTTGETFPGKFWSSLKDGVLLCKLLNSIKPGLVPHINTSRGTFPELENISAFLGGCRKVGVAEHSLFDTKDLHEKRDMQVVVHCLHVLGAAVQSTVPEFNGPFLGKKSDALSIVNAR 1914
E E WIE GE F F SLKDGV+LC L+N IKPGL+P I TS F ++EN+SAF+ CR +GVAE LF+T DL+ ++++ VV C+H LG +Q T+PE+NGP LG K S VN R
Sbjct: 292 EEEAQEWIEAVLGEKFLASFGDSLKDGVMLCSLMNKIKPGLIPRIQTSSMPFKQMENVSAFVRACRSIGVAEFDLFETVDLYNQKNLGQVVQCIHALGRTIQKTMPEYNGPLLGVKE---STVNPR 414
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D7G043 |
| Preferred name | SCP1 |
| PFAMs | CH,Calponin |
| Model size | 3949 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K20526 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000278,GO:0000281,GO:0000910,GO:0001300,GO:0003674,GO:0003779,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005938,GO:0006810,GO:0006887,GO:0006996,GO:0007010,GO:0007015,GO:0007049,GO:0007568,GO:0007569,GO:0008092,GO:0008150,GO:0009987,GO:0015629,GO:0016043,GO:0016192,GO:0022402,GO:0030029,GO:0030036,GO:0030479,GO:0030674,GO:0030863,GO:0030864,GO:0032502,GO:0032940,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0044877,GO:0046903,GO:0048869,GO:0051015,GO:0051179,GO:0051234,GO:0051301,GO:0051764,GO:0060090,GO:0061640,GO:0061645,GO:0071840,GO:0071944,GO:0097435,GO:0099568,GO:1903047 |
| Exons | 4 |
| Evalue | 4.02e-309 |
| EggNOG OGs | COG5199@1|root,KOG2046@2759|Eukaryota |
| Ec32 ortholog description | Calponin homology domain |
| Ec32 ortholog | Ec-12_007140.1 |
| Description | actin binding |
| Cds size | 2628 |
| COG category | Z |
| BRITE | ko00000,ko04131 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680791455.3179965-UTR-P-littoralis_Contig7:757247..758253 | 1680791455.3179965-UTR-P-littoralis_Contig7:757247..758253 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig7 757248..758253 - |
| 1680791455.3898911-UTR-P-littoralis_Contig7:768904..769219 | 1680791455.3898911-UTR-P-littoralis_Contig7:768904..769219 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig7 768905..769219 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680791455.3368611-CDS-P-littoralis_Contig7:758253..759320 | 1680791455.3368611-CDS-P-littoralis_Contig7:758253..759320 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig7 758254..759320 - |
| 1680791455.3536077-CDS-P-littoralis_Contig7:759882..760140 | 1680791455.3536077-CDS-P-littoralis_Contig7:759882..760140 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig7 759883..760140 - |
| 1680791455.366044-CDS-P-littoralis_Contig7:762049..762998 | 1680791455.366044-CDS-P-littoralis_Contig7:762049..762998 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig7 762050..762998 - |
| 1680791455.3793268-CDS-P-littoralis_Contig7:768550..768904 | 1680791455.3793268-CDS-P-littoralis_Contig7:768550..768904 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig7 768551..768904 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig7.193.1 >prot_P-littoralis_Contig7.193.1 ID=prot_P-littoralis_Contig7.193.1|Name=mRNA_P-littoralis_Contig7.193.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=876bp
MMMMTVSASPRADKTWDRAMPAAAPRTPSARFSQDVSSGMKARTWVEEVI GRSLPEGDFAAAFKDGVGLCELVNVLRPGTITKIEKSASPFHQMANISCF LRACRAVGVREQALFETLDLFNENRLSQVMRCLFSLSELARAKMPSYSGP YLAPPEKPQVDPAVLHLVDISKGKVLPAPGWGGGPVTPGGVSIASTGGAS SGGPAAQILSLPNPIEEEFTSSGRCLSPAAHKAGQLTYGIYEGGGITTAA SPLPRSPVSGKARWRQAKEKQQQEEEEVQQQQQQRRTSAISEEAQEDEEP AAATETLQLRAQDRDVGGAGKDESHRVAATVAGSALPAVNSPRAGAVPAA GAALSGEPASGGWKRVTVPSPRDGGGSGGSGGSSLGGKSSVEDQAKRRRE ATARIDTEMEVALWIEGTTGETFPGKFWSSLKDGVLLCKLLNSIKPGLVP HINTSRGTFPELENISAFLGGCRKVGVAEHSLFDTKDLHEKRDMQVVVHC LHVLGAAVQSTVPEFNGPFLGKKSDALSIVNARGLRKRLGKGPGARGGIL TLTAHKGGAGEHISSGDLPIEHPDPTATMTPAESPSAKWARRREPSDAGE SGGGKGAPASPRAMAEGLSGALLPAVILEEETGMAPTVVRVEREGRRGAR VVEEPNGGGGRRNLAGLFAGSGRPGAPHEGGGAKEGGGGGGARTFRRTVS GTNGVSGNQRRRRAAHRQHEEEDEGEGVASQIQRFVELHTQQPWRVSGDM HESLRDGWQLALLANALRPGAVRRVHNSIQPAKQVQNIASFLIASRRMGV ARVLLFDIEDLYENKSQTKVARTLLALRALAADPDFASARPSSLMGTSLL VTAAALAKERQVKGPASTTSTDLRR* back to topmRNA from alignment at P-littoralis_Contig7:757248..769219- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig7.193.1 ID=mRNA_P-littoralis_Contig7.193.1|Name=mRNA_P-littoralis_Contig7.193.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=11972bp|location=Sequence derived from alignment at P-littoralis_Contig7:757248..769219- (Pylaiella littoralis U1_48) ATTTGTGTGTGTTCGTGTGTTCCGCTCTGGTGGATACGTGTATACCCGTA
TCCTCCTCATCAACTCGAATGATACACTACGTGTAACACCACACTGCCTC
CTTGCTTAACCTCGCACTCTGCACTCCGCCGTTGACGTAGGGCGTGGGCA
GGAGGCAGGTCCTGCTTGTGACGTTATAGATTCACGAGCAAAGGGAGCGG
GAGGGAAGTACCCTCTCTCTATCTTCTTCCGACACAGCAGTGATCTGTGC
CACCACGACGGCGGTAGTGGTTGAAGGGTCCGGCACCAGAGCGCCGAAAC
TCGCAAGCGACGCAAATGATGATGATGACGGTATCAGCATCGCCTAGAGC
AGACAAAACGTGGGATCGCGCGATGCCGGCGGCAGCACCGCGCACTCCAT
CCGCACGCTTTTCTCAAGATGTATCATCGGGCATGAAGGCGCGGACGTGG
GTGGAGGAGGTGATCGGGCGTAGTCTTCCGGAGGGAGACTTTGCCGCTGC
CTTCAAGGATGGCGTTGGACTGTGCGAACTGGTGAACGTTTTGCGGCCGG
GCACCATCACCAAGATAGAGAAATCCGCGTCTCCGTTCCATCAGATGGCG
AACATCAGTTGTTTTCTGCGGGCTTGCCGGGCGGTTGGCGTTCGCGAGCA
AGCGTTATTCGAAACCCTGGTGAGCGATCATTTAGCAGGAGTTTGCACTA
CATATCATACGTACTGCTGTACATAACGGACATTTTTCTCTTTGTTATTA
TCATCAAACAAGCACACACGTACAACTGCTGTACATCGTTATTGGAGTTG
AGTTATTGTGCTCTCAGGTGTCTGAAACAACGATGTGCACTCTGTACACT
AGTTTAGTTTCCCTACCGGTCGCCCCGGTGGTTCAGTTGGTAATCCACGT
AACCTTTTGACATTCACGCGTGAGTTCGAATCCCAGTGCAGCAACACGGT
CTGGGTTTTCTTCTCACAATGCGCGTGAAAGTGGAAAGCGATTAATTCGT
GAGTAAACAAAATTCGATGGTACCATCGACGAGGGAAGAGGATCGCTGTC
CCCTTTCTCTCGATAAAAGCAAACCAAAACAAGGCAAGCACCCCAGAGGG
AAGTGGAGAAAATAAAAAACTCCTCCTGTGTTGACTTCCCCTTGTGTGAC
CCCAGTTGGAGCGTCGACCTACCCGAAAGATGCAGAGTGGCGTCCAACTA
AAGGGATGGCAAGACACACACAACACACACACTCGCTCGAGTATAGTGTT
CTGAGTACTCCGAAGTATGGTGAATGAAAAATCCAAAATACCGAGACCCC
ACTGATCATGCTGTGATGACCCGCCAGCATCATGCAGAACGACCTGTACG
TACTTTCGACGGCTGCATCTTGTCATACGCATTCTGTGCTCTGTGAATAC
GCGATATTTGGGCGTTCCTTTCCACCATTCATGGAGAGAGGTGAGACGCG
ATAACTGAGGAAAAAATAGTCGTCGTCCAGTTGTTTAGGTTCGGTGTTTT
GGAGCAACCCATGATATTATGTATGTACCTGGAACAGTAGTATCGACACA
CATGTCTCCAATTCTGTGCTCTGTGAACAAGCCATCTTTGGGCGTTCCTC
TCTTCCATGAGAGAGGGGAGACGCGATAACTGGAGGAAAACTTAGATGTC
GTCATCGAGTTGTTTATGTTCGGTGTTTTCTTTTGGAGCAACCCATGATA
TTATGTATCGACACATGTCTCCAATTTGTCCGTTATACCGTTATAACGAA
GTACTCCGCGACTTCGTACTCGCTACTTCGGAGTATTCAAATTACAGAGT
ATTCAACTGGTTTTATTCGAACAGCATTAGTACCTGGTACATGAAAAAAG
TGCAACCACAAACATCTGGGACATCTTGTCGTGGACTGCTGTACGTTGTA
CGACCTCGTCCTCGTATCTGAAGGGTAGAGGGCGGTAATTTTTTTAACTC
TTAACCCCAAGATAATAATAAGGGTATGCACGAAAATCACCTTCCCGCCG
TGGGAGTAGCGACCTGAGAGGTGAACTCAGCAGAGGACACAACGGGGAGG
CGCATCCTGGTCTATGGTCAGGTCTGCTGCTTGGGAGGAGATATCGACCG
CAGCAGTATTATATCATAGCTCAATAACTCCGCAATCTGGACCGAAGCCG
ACCGGTTGATGCGGCTGTACTGCCCGCCATTGGCACCCCTGTCCTGAACT
GCGGGTCATCCGAGGCAGCAAGTGGCATGAGCTACTGCTGTAAAACCCCA
GTTGGAGAGGTTGGCGTCTGTGGCGGCGGGCGCAGCAGTGGAAGATCTTT
GGTGTCGGTCTAGTTTGCGGCCTTATTGAGCCACGAGTTGCTTCTGCAGC
ATAAGATACTCCGCCCCACCAGCAGATGTGAAGTCTAAGGCCCTGTATTA
ACGATAATCAGGAAATCGAAATTGGAAAGAATCGAAATCAAAATTGGTCT
GATTGGTCGAGGCTCTCAAGACCTCCCGACGACAATTTTGATTTCTTGGA
CATCATCGGCAGACCAAAGAAGTCCAAAAAGACTTAATTGCCAGAAAATC
AAAATCAAAATTGGGGGTCTTTACCCGATCGAAGGCTTTCTGAACGATGT
GGCTCGCGCACCACACCACAGACAAGCAGACAGAGGAACAGGGCACGCCG
ACGCAACCCACACAACACAGAGAGAGAGGTGTGCCGTCGCACCAGGCATG
TCAAAACCAGCACCACACCTAGAGCAGAAGAAAGACAAGACAGACTCGCA
TGATGAGGCACCAGACAACACCTAGAGCAGGACAACGACAGCCAAACTAC
AAACAGCAGACAGCCAGACGCGTACAGCAGTCTCGAGTCCATGATGAGCC
AACACACACAAACAACGCGGTGTCTCTCAGCGACGTAGCATCAGCGTGCA
GTGCTGCTCTGAAACATGTATCTGTACTGCCGCTGCTGTTGTTATGTTTA
CAGCAGTGCCGATCGATGGTGACATCATCAATCAGAGATTTTGGATCTCG
GCGGTGTTTACAGGCCTCTACCAAGCTGGTCCGTTAATATGGCTCGCAGT
GTTTTTCGTAAAATCAAACTTTGATTTTGCTGTTTTGATTTTTCAATTTT
GATTTCCTGATTGTCGTTAACACAGGGCCTAACCAATTTACACGCTGCTG
CAGGGCTTCCTCTACTGACGTGGCGTCCTACGTAGATCGCTCCTTGCACA
AAAAGCCTTACTGCAACCCTTACAAAAATAAACGGTTTCGACTCGATTCC
GTTCACTCGTGGTATTGTGGAAAAAAATATCTCCAGAGAGATCAACGACC
GATGTCAGACGTGGACGCGTGACATGCATGTAAAGATGTAAAGAAGCCAC
GGCCACCCGCTGTGTTAAATTAGCCACCAGGTGTTTTCTTGCCCAAGGCC
TTCCTCCTGTACCTGTCCCGGTGTGAGACCCCCGTGCGTCGTTGTCGGGT
GCTTCTTCGCTGCTTTCTAAAACTAGTCAAATCAAAAACCGGTCGTCCCT
CCGCCTCAACAAAATTTGTGACACCCGGATTGGAGGCCAAATTCGGACAG
CAGTCGTACGTACCTCGTATTCACGTTTCATATGATATGCAATTAGGGTG
GCTCTTGGCAAATTTTTGACCGTACAGTATTCAAAATCAAAAACAAAATT
GGATTTTGATTTTGATTCCGTGTTGGGTCCGATCTGCTGCAGCTTGCGTT
CATCCAAAATCAAAAGCGGATAAAACAAAAAAAACAGGGGTCACAGACAG
GTGGTGTGTGATATGAGCATGCCGTGTCTCGATTCCAAGACAAGTGCGGG
AGCTGTCGTGCCTCAAACGAAGAGCACGATGGTCCCCCACGTCGCCCTGA
CTCAGGCGCGTTGGTAGTTCTTTGTTTGGGATCGATGACCGAAAAACTCG
GCAAGAGATGAGTAAGTACGTGTTGCACATCTGCCCTTTCTGGAGGTAGC
GGCTGTGTCAGCTACGCAAACAGCAGTTGAGCAACAAACTTCCTGCACAC
TTCTACACACTTGAGTGCTGCTCTCCGGATTGTGATCGGAATTCGCTCAA
ACAAAGTGATCTGTATTCTGCTTGATACCAGCTTTCTCCGGAGCTAGCAC
ACGTGTACAGCCGGGGTCTACACGTTGTGCTGTGGTCAGCTAAGCAAACA
TATGTAGTGTGCACCATGTGCTCCCGGAATGCACAGCAAACACTTCTCTG
TCTCATATTCTAGGTCTATTCGTTATTGAGCCGCGTTTTTGATCCATTGG
CGGGAAGGAAAGTGTATTCTACTTTCCTTCCCGTTTCGGAAGAATAAAGC
TGAAATCCAAAACGTGGTGCGGGCGGATGAATTGTTGACCTATCAGTGAC
ATTCTGAGTTTGAGTTTTGCTTTTTGATTTTTGAATGGGCCCAAAACGCT
TTGACAAGAGCCACCCTCATTTCTCACATGATACGAGTACATACATTGTA
CTTCGAAGTAGTGTTTTTTGGTCAGAAAGACCGATGTCGTCTTAACGTTA
ATTTGTTATATTTTTGGTCGAGCATTTGTAGCTGCTCTGCGTCCCAAGTG
AAGCGATGTTTACGCGAACGCCACGGAAACGACTGCTTCGTAAGAACTAG
AAACTGGTGTGGTTGATTACCAGCAGCGCCGACCACATAAAAACATTAGT
ATGGTGCTTGCTGTAGAAGGCACGCACGAACTTTACTCAAGACATTCCCA
TGCGTCTGTCTAGAAGCCGCGCTACATAGACGCCGATCTCAGCAGGCGGG
GCACTACCCGCTGCCAGCTGTTCAAAAGTTCATACGTATGATATCAGCCA
TCGGCACGTGTGAAGTGTGTATGGGGTGTGTGAGGGCGTGTAGAACGTGT
GGGTGGCTATACAGAATTCCATGTCAATCCATCGGCACGTGTACGCATGC
ATGTGCGTGAGTTTTGTGGGTGTGCGGGCGTGTGAGCGCGTGGGTGCGCC
CCTGGTCTGCGCATTGCAGCTGCTGCTGCTAGTTGCGTGCGTGCGTGCTG
TCGGTCTCTTTGGCATTGTACTGCTTGGTTGTACACAACATTTGGTCATT
CATCACACCGCCGTCAGTGTTTCTCACCGCAACTCCCTGTTCCGAATCGT
CGAATTCCAAAAATCAACCTCCCGAGGTGATGTCGTGTATGTTCCCTATA
AGGGAAGAAGTACGAAAAAAGGCCAAGTAAGAAAAGCTGCCAAGGCTTTT
GAGTTTTGAGCCGATACAGTGACCTAGCACCTGCCCAACGCCCAAGCAAC
CAAGCTATCCACCTCTCCTGACCGTTGGGGTTGGGCTTAGGGTTCTGTCA
GGTTGGGCCGTGTTGGGTCGGTGTGGAGTGTGGGTGTTTAGGTAAGGGGG
TTCCGCGCAGTGTTCAGAGTGAGTGGGGTCCTGGTCAGCATGTCTACGGG
GTACAGATGACGAAGAACCAACAGGACATTTGCAGTTATTTTTCTTATTC
TTCCCTACAGGAAACCTATTCGTGCGCTGCCTCCCGAAGGCTTGATTACT
TTGCACGAAAAAGCGAGCCCCGTGGGATGCAAAAGGTAGCCCCGTGACTT
GCAAAAGCTGGTTTTCAAATTCAGAGGAAATTTCAGATCCAACTAGCTCT
CCAATCCGGGTGTTGCATTTTCGTGAAGACAAGCCCTCATCGAAGGTATC
TGTGGTTTAGCCGTTCTCTCGCCCTCCCGTTTCTTGTGTTACATCTGACG
TTTTAGACACGCTCGCGCAGAGGACGGGCATCTGTTGTTTGGCTGCATGC
ACTGCTGCCACGATTTGTCTTCCTGCGCTCACACGTGGCGCCTCCCCCCT
TTGAATGTTTTTCAATATGTGTCAACCTGTTTACTTGGCGTCACCCCCCC
TTGGCTTGTCGACGTTCCGCTCTCCCGGCAACAGGCCATATTGGGAGGTG
GAGGGTTTGCTGTTGTTTCCCCATCTCCTCTCAAGTACTTGTAGCACTTT
ATGACTGAATATTGGTAATATGCACAGCAGTGTGTACACCATTTAATCAC
CTACATGGCGCCACCCCCCTGCGACAGAAGTAGCAGCACTCTACACAGCC
GTATTGTGTAAAGTTGCAGCACTCAAACGCATACCTGAAAATTGCGACGG
TTGTACTTGGAAGTATAAATCCTGGTACCAATGAATTTTATTTAGTCTCC
GTCGCATTTTGTCTCTCAAATCAAACTCCTCACACGCTGCGCATCACGCC
CTCACGCCCTCCGTCCTCCAGGACCTCTTCAATGAGAACAGGCTGTCGCA
AGTAATGCGGTGCCTTTTTTCCTTGTCGGAGCTCGCCCGCGCCAAGATGC
CTTCGTACAGCGGGCCCTACCTCGCGCCCCCTGAAAAGCCGCAGGTGGAT
CCGGCCGTACTTCACCTCGTCGACATCTCCAAGGGCAAAGTCTTGCCTGC
TCCGGGTTGGGGTGGTGGACCTGTCACGCCCGGCGGCGTCAGCATAGCCA
GCACTGGTGGCGCGAGCTCGGGCGGGCCCGCGGCTCAGATATTGTCGCTG
CCGAACCCGATCGAGGAGGAATTCACCTCCAGCGGCCGGTGTCTGTCCCC
CGCAGCTCACAAGGCGGGTCAGCTCACGTACGGTATCTACGAAGGAGGAG
GGATAACAACAGCAGCTTCTCCGCTCCCACGATCGCCTGTTTCCGGAAAA
GCTAGATGGCGACAAGCGAAGGAAAAGCAGCAGCAGGAAGAGGAGGAGGT
GCAGCAGCAGCAGCAGCAGCGGAGGACCTCCGCTATTTCTGAGGAAGCAC
AAGAAGATGAAGAGCCGGCGGCGGCGACGGAAACCTTGCAACTGCGAGCT
CAGGACCGCGACGTGGGTGGCGCCGGCAAGGACGAGAGCCACAGGGTGGC
GGCAACTGTTGCGGGATCGGCGCTTCCGGCCGTGAACTCGCCGAGGGCAG
GAGCGGTGCCCGCGGCGGGGGCAGCGTTGTCGGGAGAGCCGGCGAGCGGC
GGCTGGAAGAGGGTGACCGTTCCTTCTCCACGAGATGGAGGCGGCAGCGG
CGGCAGCGGCGGTAGTTCGTTGGGAGGAAAGAGCTCTGTCGAGGATCAGG
CCAAGAGGAGAAGGGAGGCAACGGCTCGCATCGATACGGAGATGGAGGTG
GCGCTGTGGATCGAGGGAACGACCGGGGAAACGTTTCCCGGGAAGTTTTG
GTCGAGCCTCAAGGATGGAGGTAAGAGGCAGAATATAGTATGCTTCGAAG
TACCGAAGTAAAAGCAGCGATCGAGGCAGAAATATGACAAGTTGAAGCAA
AGAAGCCATAATCCAGGCGAACGTTTGATAATTCTCACATGGCAGCGAAT
GCAACACCCATGTCTTCTAACCTTGCACTGGCGGTGTGCGATCATTTAAA
CTTGGGCACCTACTGCGTGTGATCAACCACACACACGCCACGCTTTTTTC
CCACACGTGTGATCAACGGGGGCCCCGCGATGATATACGAAGTATCAGCT
TAACTTCAAAGGGTGCGGTATCTTATGCCACCCGTATTGTAAAAAATGGA
GAAGGCGATTTTTTAGGGTTAAAAGTACGGGTATCACTTGGATGTGGTGT
TCTGTAATGTTCATGGGTTTGCTTTTTTTTTTCGAAAGTTTACAATCGCG
CGTATCCCACTGCGCTGTTTGCACATGGCTGCATCATGCACAGTTTACAC
ATATTCAACTACCCGGATCCTCGCACATCTACTGCTCTCCATCACCCGAG
GTCTGCAAAATGTTGTAATCTCGCCGTCCACCCTGAGATGCGCGGTAGAA
TGCCGTGTGCCGCTGTCCCGTACATTATTGGAGATAACGCACCGGGGTGT
GCACCAGTTTCCTCGTCCGATATCTCGACAACAGGAGGGTGGTTCTTATC
CTCTACTATGTCGGACTTCGAAGTATCATATCATACGTGTAAAAGCCCAG
CCGGATGGTAAGTAATTGAAATTTCCAAGGACCGCAAAAGGGATGGTGGG
GAGCGCCAGGAAGAGGAATCATTTTTCGCTCAAACCCGATTTTACGACGC
CCGAACATATGCATATATCTTGCATATCCGTACCAACTGCTAAGGTCAGT
TGAGAGACCCGAGTAGGTCTACCGGCAGGCGCTTGCGCAAGATGGAATAT
CACAGAATATGCAGAACCCACGGCCCCAAGACCTCGGCCTTTTCCAATTC
ATCTACCATAATCAACGAAGTGTCGTCTGAACAAAAGCAACTTAAATCAT
GTACGAAAACTATTATTGCTCCACATTAAAGCCACTCCCGTATCCACTAC
TTTTTCCCACCTGATCAGGAAGGGGCTGTAGATATGCTGTTACAAGATCC
CCCCCGAACCCAAAATTATAACTTTGGTGGACCTATCGCCGTCCACTTGT
ACTGTATTACTTCCCCACGCCCTCCCCCTTTATTCTAGCCTCGTCTCGGT
CTCAAACTTGCCCGTTCCGCTGACAGACTGGTCGTCGTTTTTCTCTTCCT
TCCGGTGCCCGTTTTCCTCTCGGAGTCTGCCTCTTTCTCTTACGTCCGTC
CAGCTGTAGTCCCGCCCCCCAACCCCCAGATTCGTTTCATTCAATCTCAC
TTCTCCTCTCGGGTCGGGTGATGTCACGGAACAAGTCACACGCACGTTTC
TGTACAGCAGTAGTGATATGACGTGATATGACGTGATACTACTGCACGCA
GGATGCTGCTACTGCTGCTGCTGCTTGCTGCGGATAATTGTAACGAACAA
TAGTGGACAAGGGCGACTCTATGACTCTGCCCGTACCTCGTGCCCAGCCA
CACGCTTGTATTTATTCCGCCTTTCTACATGTGCCCATGGTGTTGCGGCA
CATGCACTCCATGTTTACTGACAGCATACGCGTAACCCAACACGATACGA
ACACATGTTTGTCGTATCGTATGTGTCGGTAGCTGTCTCACCACTACAGT
ACTGCTGTTTTGTCCGGACTACCTAGATTTCGTCATGTACCCACGTGCGG
GGGCAACGGCAATGATTTTTGCCCATGCGTTATCTGCACTGACTGTCCCG
TGATCTGTCTCAAAAGCTTCTGTCCGCTTTCTCGTTGTCCCCGCCCTCTC
CCCCTTTTCGTCCTGCCACACCCACACAGTTCTCCTGTGCAAATTGTTGA
ACAGCATCAAGCCAGGTCTCGTTCCACACATCAACACGTCCCGCGGCACC
TTTCCCGAGTTGGAGAACATCTCCGCCTTCTTGGGCGGCTGCCGGAAGGT
CGGCGTGGCCGAGCACTCTCTGTTCGACACGAAGGACCTCCACGAGAAGA
GGGACATGCAGGTCGTGGTGCACTGCTTGCATGTGCTGGGCGCAGCGGTG
CAGTCAACGGTGCCGGAGTTCAACGGGCCCTTCTTGGGTAAGAATAAACA
TCGGGTATTTGTTTTGCTCTGAATTTTTGTGGCGGTAATAACGACGGCAT
GTTTTTGGGTCGGTCCGTGCTTACCACTTGTCTTCATGTGGTTTGTGAAG
GCGGGTTGGATTTTTGGCGGTGAGCAACGTTGAACTTACAAAACTCAATG
GTACCTCCCCTCTCTCCACTACGCCCGCCCATTTGGTACAGGAGCGTATT
GCGCGAGTGACACATTCGTTTATTGTGAACTGCTGGGTACATCCCAGAGG
CCCGAAGGCGTGAAGGTGGATGTTGACCTGCCCTGAAACCGGCTGCTGTG
CAGTTAGTTGCACGCTCGTTAAGCTGCGTGCCGTAGTTGCGAAGCATCAG
TGGCGTGGAGGTTACAAAAAAAGCGATGCGTTGTCGGAACTCAAATACTT
GTAGAAATATCCCGGGCAAGATTCACCAGAGCGTGCGAAGGAAACCCAGG
CCATTCCAACACCGAGCCCCGAACTCTAACCCTCCCGTCTCTCTTTGCAG
CCACGATACTTACTCACTCCATCCCTCCCGCCCCGCTCCGATCAACCAGG
CAAAAAATCGGATGCTTTGTCGATTGTCAACGCCCGAGGCCTGCGGAAGC
GGCTGGGCAAGGGACCAGGGGCAAGGGGCGGGATTCTCACGCTCACCGCT
CACAAGGGCGGCGCCGGCGAGCACATCAGCTCCGGCGACTTGCCGATCGA
GCATCCGGATCCGACGGCAACCATGACTCCCGCCGAGTCGCCTTCGGCGA
AGTGGGCCCGCCGGCGCGAACCGTCCGACGCGGGAGAGTCCGGCGGCGGT
AAGGGTGCTCCCGCTTCTCCGCGCGCGATGGCGGAGGGGCTGTCCGGCGC
TCTACTGCCGGCCGTTATCTTGGAAGAGGAGACCGGGATGGCTCCTACGG
TTGTGCGCGTGGAGAGGGAGGGCAGGCGCGGCGCGAGGGTTGTCGAGGAG
CCCAACGGCGGTGGCGGGCGGCGGAATCTGGCAGGGTTGTTCGCCGGATC
GGGAAGGCCGGGCGCCCCTCATGAAGGGGGGGGGGCGAAGGAAGGAGGAG
GAGGAGGAGGAGCTCGAACGTTCCGGCGGACTGTCAGCGGGACGAACGGT
GTCAGCGGCAATCAGCGGCGTAGAAGAGCCGCCCACAGACAGCACGAGGA
AGAGGACGAGGGCGAAGGCGTCGCGTCCCAGATCCAAAGGTTCGTCGAGC
TTCATACCCAGCAGCCATGGCGCGTCAGCGGTGACATGCACGAGAGCTTG
CGGGACGGGTGGCAGCTCGCGTTGCTGGCCAACGCTCTGCGACCGGGAGC
CGTCCGGCGCGTCCACAACTCCATCCAGCCGGCCAAGCAGGTCCAGAACA
TCGCTAGCTTCCTCATCGCCAGTCGGCGGATGGGCGTGGCGCGTGTCCTC
CTGTTCGATATCGAAGACCTCTACGAAAACAAGAGTCAGACAAAGGTGGC
GAGGACGCTGCTTGCGCTGAGGGCTCTCGCGGCCGACCCGGACTTCGCTA
GCGCGAGACCGTCGTCTCTGATGGGCACGTCTCTGCTGGTAACCGCGGCG
GCCTTGGCAAAAGAACGGCAGGTGAAGGGGCCGGCGTCGACGACATCTAC
GGATCTGAGGAGATAGCTGTAAAACGCTCGCTGTTCAAATTAAACTCTGA
CTGACTTGATGGGCTGTGAGCTGCGGAAGCTCTGGATGGGCGAAATGCAG
CGGACATTTTGCTTAATTGTTGTTTACCTGTGGGATTTTGTAGCACTCCT
TTTTGTGTTGCCAAGCTCGGTATAGTCGGGGTGGAGCGGCGAAGGGGGGA
TGGGGGGTTGATATTCACTCCATGCGTAGGTAGCATTTGGGCCGTGGTGG
TGTGGGAATACAGTAGTCGTTGATGTAGATGGGCATGTGATATATTATAG
TCCTGTATTGGTGTCCGTAGCTTTTTTGGCACCCAGTAAAGAAATGCGCG
TGTTTTGTGTCACAGATGACGTCGGTTTGTTGGTGGTATTTCGGAAGTCC
TTCCAGCATAGAACCGAGTAACCGAGTTGCCAGCTTTTTTCCAGGCGTGC
AAGCTGGCGAGAAGATCCGTGGCCAGGTTGAATTGTTTGTGGGGTGGGTG
GAGTTGTGTAGTGTTTGGTGTGCGATCAAACAACCATTCATGGCTGTTGT
TTGTGCTGTAAAGTGTACCAGGTATCAGTTAACGTTTTATTAGTGTTTCC
ATCTTTTTATGTTGAGAAGGGGTCTCGCCGGTGCCCGGGCAACGGAAAGT
CCAGCCGCCTTTTCTCCTTTTCTCCTAGAATAGTAATTCGAGAAGTAGCT
CGAAGGGATCCCTCCCACTCTCTCTCAGGCTATGTATGCATGTCGTTGTC
ACCAAATTCCGGTCGAGTTTTCATCCATTCCAAAATTTGTTTCGACATTT
ATTTACATACACACCGATGTATGGGTCTTTGTCCCTTATCGCCTGGCGGT
GAAGCAAGCAAAGCGGCGGGTCCGCGGGCGGCCGTGGATGGGACCAGCGT
GACTGACATGTTGTCATCACTAGGTGTGATATAGTAAAGTATTGGGGAAT
TACAAGAATGAAACAAGAGGATGCAAGAAAAGTTTCATTTGCTCGGATTT
TTTTGTGTTTTGTGTATGGGGG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig7:757248..769219- >mRNA_P-littoralis_Contig7.193.1 ID=mRNA_P-littoralis_Contig7.193.1|Name=mRNA_P-littoralis_Contig7.193.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2628bp|location=Sequence derived from alignment at P-littoralis_Contig7:757248..769219- (Pylaiella littoralis U1_48) ATGATGATGATGACGGTATCAGCATCGCCTAGAGCAGACAAAACGTGGGA TCGCGCGATGCCGGCGGCAGCACCGCGCACTCCATCCGCACGCTTTTCTC AAGATGTATCATCGGGCATGAAGGCGCGGACGTGGGTGGAGGAGGTGATC GGGCGTAGTCTTCCGGAGGGAGACTTTGCCGCTGCCTTCAAGGATGGCGT TGGACTGTGCGAACTGGTGAACGTTTTGCGGCCGGGCACCATCACCAAGA TAGAGAAATCCGCGTCTCCGTTCCATCAGATGGCGAACATCAGTTGTTTT CTGCGGGCTTGCCGGGCGGTTGGCGTTCGCGAGCAAGCGTTATTCGAAAC CCTGGACCTCTTCAATGAGAACAGGCTGTCGCAAGTAATGCGGTGCCTTT TTTCCTTGTCGGAGCTCGCCCGCGCCAAGATGCCTTCGTACAGCGGGCCC TACCTCGCGCCCCCTGAAAAGCCGCAGGTGGATCCGGCCGTACTTCACCT CGTCGACATCTCCAAGGGCAAAGTCTTGCCTGCTCCGGGTTGGGGTGGTG GACCTGTCACGCCCGGCGGCGTCAGCATAGCCAGCACTGGTGGCGCGAGC TCGGGCGGGCCCGCGGCTCAGATATTGTCGCTGCCGAACCCGATCGAGGA GGAATTCACCTCCAGCGGCCGGTGTCTGTCCCCCGCAGCTCACAAGGCGG GTCAGCTCACGTACGGTATCTACGAAGGAGGAGGGATAACAACAGCAGCT TCTCCGCTCCCACGATCGCCTGTTTCCGGAAAAGCTAGATGGCGACAAGC GAAGGAAAAGCAGCAGCAGGAAGAGGAGGAGGTGCAGCAGCAGCAGCAGC AGCGGAGGACCTCCGCTATTTCTGAGGAAGCACAAGAAGATGAAGAGCCG GCGGCGGCGACGGAAACCTTGCAACTGCGAGCTCAGGACCGCGACGTGGG TGGCGCCGGCAAGGACGAGAGCCACAGGGTGGCGGCAACTGTTGCGGGAT CGGCGCTTCCGGCCGTGAACTCGCCGAGGGCAGGAGCGGTGCCCGCGGCG GGGGCAGCGTTGTCGGGAGAGCCGGCGAGCGGCGGCTGGAAGAGGGTGAC CGTTCCTTCTCCACGAGATGGAGGCGGCAGCGGCGGCAGCGGCGGTAGTT CGTTGGGAGGAAAGAGCTCTGTCGAGGATCAGGCCAAGAGGAGAAGGGAG GCAACGGCTCGCATCGATACGGAGATGGAGGTGGCGCTGTGGATCGAGGG AACGACCGGGGAAACGTTTCCCGGGAAGTTTTGGTCGAGCCTCAAGGATG GAGTTCTCCTGTGCAAATTGTTGAACAGCATCAAGCCAGGTCTCGTTCCA CACATCAACACGTCCCGCGGCACCTTTCCCGAGTTGGAGAACATCTCCGC CTTCTTGGGCGGCTGCCGGAAGGTCGGCGTGGCCGAGCACTCTCTGTTCG ACACGAAGGACCTCCACGAGAAGAGGGACATGCAGGTCGTGGTGCACTGC TTGCATGTGCTGGGCGCAGCGGTGCAGTCAACGGTGCCGGAGTTCAACGG GCCCTTCTTGGGCAAAAAATCGGATGCTTTGTCGATTGTCAACGCCCGAG GCCTGCGGAAGCGGCTGGGCAAGGGACCAGGGGCAAGGGGCGGGATTCTC ACGCTCACCGCTCACAAGGGCGGCGCCGGCGAGCACATCAGCTCCGGCGA CTTGCCGATCGAGCATCCGGATCCGACGGCAACCATGACTCCCGCCGAGT CGCCTTCGGCGAAGTGGGCCCGCCGGCGCGAACCGTCCGACGCGGGAGAG TCCGGCGGCGGTAAGGGTGCTCCCGCTTCTCCGCGCGCGATGGCGGAGGG GCTGTCCGGCGCTCTACTGCCGGCCGTTATCTTGGAAGAGGAGACCGGGA TGGCTCCTACGGTTGTGCGCGTGGAGAGGGAGGGCAGGCGCGGCGCGAGG GTTGTCGAGGAGCCCAACGGCGGTGGCGGGCGGCGGAATCTGGCAGGGTT GTTCGCCGGATCGGGAAGGCCGGGCGCCCCTCATGAAGGGGGGGGGGCGA AGGAAGGAGGAGGAGGAGGAGGAGCTCGAACGTTCCGGCGGACTGTCAGC GGGACGAACGGTGTCAGCGGCAATCAGCGGCGTAGAAGAGCCGCCCACAG ACAGCACGAGGAAGAGGACGAGGGCGAAGGCGTCGCGTCCCAGATCCAAA GGTTCGTCGAGCTTCATACCCAGCAGCCATGGCGCGTCAGCGGTGACATG CACGAGAGCTTGCGGGACGGGTGGCAGCTCGCGTTGCTGGCCAACGCTCT GCGACCGGGAGCCGTCCGGCGCGTCCACAACTCCATCCAGCCGGCCAAGC AGGTCCAGAACATCGCTAGCTTCCTCATCGCCAGTCGGCGGATGGGCGTG GCGCGTGTCCTCCTGTTCGATATCGAAGACCTCTACGAAAACAAGAGTCA GACAAAGGTGGCGAGGACGCTGCTTGCGCTGAGGGCTCTCGCGGCCGACC CGGACTTCGCTAGCGCGAGACCGTCGTCTCTGATGGGCACGTCTCTGCTG GTAACCGCGGCGGCCTTGGCAAAAGAACGGCAGGTGAAGGGGCCGGCGTC GACGACATCTACGGATCTGAGGAGATAG back to top
|