mRNA_P-littoralis_Contig7.168.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig7.168.1 vs. uniprot
Match: D7FZS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZS4_ECTSI) HSP 1 Score: 345 bits (884), Expect = 5.330e-118 Identity = 176/222 (79.28%), Postives = 186/222 (83.78%), Query Frame = 1
Query: 43 KHWSRRKAELMETYRNAYDVLQKAEETNNYGSVVEDSTTMLDEAHLVRTTRVIRTVKHFLFLEIQDGVAKMEHSREAGKVADVDSRTVRRWVKEFCKGGSFVVRKRQYNKREPHSYIDDEDIRGRLREYIDRRLYRRKKDEPRLRIADVQKWINEDLLKEELAGTRGISRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSFSRPRGRNGDGGNQP 708
KHWSRRKA+LMETYRNA QK EE NN GSVVED MLDE H+V+TTRV+R VKHFL LE+QDGVAKMEHSRE KV +VD TVRRWVK+ CKGGS V+RKRQYNKRE H YIDDEDIR LREYIDRRLYRRK+DEPRLRIADVQKWIN+DLLKEELAGTRG SRRTVHKWMQKL FRWSRH K V VDGHNRPDVVT RPRGRNGDG NQP
Sbjct: 15 KHWSRRKADLMETYRNALGTPQKVEEMNNNGSVVEDPKIMLDERHMVQTTRVVRAVKHFLQLEVQDGVAKMEHSREVAKVYEVDPSTVRRWVKKLCKGGSVVIRKRQYNKREAHPYIDDEDIRNGLREYIDRRLYRRKRDEPRLRIADVQKWINDDLLKEELAGTRGFSRRTVHKWMQKLDFRWSRHRKWVDVDGHNRPDVVTP-----RPRGRNGDGNNQP 231
BLAST of mRNA_P-littoralis_Contig7.168.1 vs. uniprot
Match: A0A6H5JH07_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH07_9PHAE) HSP 1 Score: 364 bits (934), Expect = 1.230e-117 Identity = 185/221 (83.71%), Postives = 194/221 (87.78%), Query Frame = 1
Query: 4 TPAALARARDRTRKHWSRRKAELMETYRNAYDVLQKAEETNNYGSVVEDSTTMLDEAHLVRTTRVIRTVKHFLFLEIQDGVAKMEHSREAGKVADVDSRTVRRWVKEFCKGGSFVVRKRQYNKREPHSYIDDEDIRGRLREYIDRRLYRRKKDEPRLRIADVQKWINEDLLKEELAGTRGISRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSF 666
TPAALARAR RT KHWSRRKAELMETYRNA+D LQKAEE NNYGSVVEDS T LDEAH+V TTRV+R VKHFL LE E G+V++VD TVRRWVKEFC GGSFVVRKRQYNKRE HSYIDDED+R RLREYIDRRLYRRKKDEPRLRIADVQKWI+EDLLKEELAGTRG+SRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSF
Sbjct: 291 TPAALARARGRTLKHWSRRKAELMETYRNAHDKLQKAEEMNNYGSVVEDSKTQLDEAHVVHTTRVVRAVKHFLQLE------------EVGEVSEVDPTTVRRWVKEFCNGGSFVVRKRQYNKREAHSYIDDEDVRYRLREYIDRRLYRRKKDEPRLRIADVQKWIHEDLLKEELAGTRGVSRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSF 499
BLAST of mRNA_P-littoralis_Contig7.168.1 vs. uniprot
Match: A0A6H5K550_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K550_9PHAE) HSP 1 Score: 319 bits (817), Expect = 1.350e-99 Identity = 156/181 (86.19%), Postives = 166/181 (91.71%), Query Frame = 1
Query: 124 NNYGSVVEDSTTMLDEAHLVRTTRVIRTVKHFLFLEIQDGVAKMEHSREAGKVADVDSRTVRRWVKEFCKGGSFVVRKRQYNKREPHSYIDDEDIRGRLREYIDRRLYRRKKDEPRLRIADVQKWINEDLLKEELAGTRGISRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSF 666
NNYGSVVEDS T L+EAH+V TTRV R VKHFL LEI+DGV KM HSRE G+V++VD TVRRWVKEFC GGSFVVRKRQYNKRE HSYIDDED+R RLREYIDRRLYRRKK+EPRLRIADVQKWI+EDLLKEELAGTRG+S RTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSF
Sbjct: 2 NNYGSVVEDSKTQLNEAHVVHTTRVARAVKHFLQLEIRDGVTKMAHSREVGEVSEVDPTTVRRWVKEFCNGGSFVVRKRQYNKREAHSYIDDEDVRYRLREYIDRRLYRRKKNEPRLRIADVQKWIHEDLLKEELAGTRGVSWRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSF 182
BLAST of mRNA_P-littoralis_Contig7.168.1 vs. uniprot
Match: A0A6H5KM05_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM05_9PHAE) HSP 1 Score: 290 bits (743), Expect = 9.430e-94 Identity = 147/222 (66.22%), Postives = 165/222 (74.32%), Query Frame = 1
Query: 1 WTPAALARARDRTRKHWSRRKAELMETYRNAYDVLQKAEETNNYGSVVEDSTTMLDEAHLVRTTRVIRTVKHFLFLEIQDGVAKMEHSREAGKVADVDSRTVRRWVKEFCKGGSFVVRKRQYNKREPHSYIDDEDIRGRLREYIDRRLYRRKKDEPRLRIADVQKWINEDLLKEELAGTRGISRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSF 666
WT L RAR R RKHW+RRKAELM+TYR+AYD LQK + IQ+GVAKM+HSR A +VA V+S+ VRRWVKEFCKGG+FVV KRQYNKREPHS+I+DED R LR YIDR+LYRRKKDEPRLRIADVQKWINE+LLK+ELAGT+G+SRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPD+V DRR F
Sbjct: 241 WTKTQLDRARGRARKHWTRRKAELMQTYRDAYDKLQK--------------------------------------VRIQEGVAKMDHSRAAAEVAKVESKAVRRWVKEFCKGGAFVVPKRQYNKREPHSFIEDEDKRNHLRGYIDRKLYRRKKDEPRLRIADVQKWINEELLKDELAGTKGVSRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDIVNDRRGF 424
BLAST of mRNA_P-littoralis_Contig7.168.1 vs. uniprot
Match: A0A6H5JJM4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJM4_9PHAE) HSP 1 Score: 282 bits (721), Expect = 8.550e-86 Identity = 137/138 (99.28%), Postives = 137/138 (99.28%), Query Frame = 1
Query: 253 MEHSREAGKVADVDSRTVRRWVKEFCKGGSFVVRKRQYNKREPHSYIDDEDIRGRLREYIDRRLYRRKKDEPRLRIADVQKWINEDLLKEELAGTRGISRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSF 666
MEHSREAGKVADVDSRTVRRWVKEFCKG SFVVRKRQYNKREPHSYIDDEDIRGRLREYIDRRLYRRKKDEPRLRIADVQKWINEDLLKEELAGTRGISRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSF
Sbjct: 1 MEHSREAGKVADVDSRTVRRWVKEFCKGDSFVVRKRQYNKREPHSYIDDEDIRGRLREYIDRRLYRRKKDEPRLRIADVQKWINEDLLKEELAGTRGISRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSF 138
BLAST of mRNA_P-littoralis_Contig7.168.1 vs. uniprot
Match: A0A6H5K527_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K527_9PHAE) HSP 1 Score: 239 bits (611), Expect = 2.230e-69 Identity = 123/223 (55.16%), Postives = 151/223 (67.71%), Query Frame = 1
Query: 1 WTPAALARARDRTRKHWSRRKAELMETYRNAYDVLQKAEETNNYGSVVEDSTTMLDEAHLVRTTRVIRTVKHFLFLEIQDGVAKMEHSREAGKVADVDSRTVRRWVKEFCKGGSFVVRKRQYNKREPHSYIDDEDIRGRLREYIDRRLYRRKKDEPRLRIADVQKWINEDLLKEELAGTRGISRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSFS 669
WT LAR RTRKH S RK EL+ +R A D + +A N+Y S+VE TML VR RVI V+ +L +EI +GV K+ HSR G+ V +RTVR+WV +FCK G FVV R+Y KR+P YIDDEDIR + REY+D R+YRRKK +PR R+AD Q+W+N LKEE AG GI R T H W+ +LGFRW RH KCVYVDGHNRPDVV RR ++
Sbjct: 395 WTKQQLARQARRTRKHCSERKEELVRIFRQALDKIDQA--GNDYTSLVEKPDTMLARVRAVRVCRVIGAVRTYLTMEINEGVKKLAHSRAVGEAVGVHARTVRKWVTDFCKDGKFVVPHREYVKRQPFCYIDDEDIREQCREYVDERIYRRKKGQPRFRVADFQRWVNTVCLKEEFAGGGGICRSTAHVWIAQLGFRWRRHGKCVYVDGHNRPDVVQARRLYT 615
BLAST of mRNA_P-littoralis_Contig7.168.1 vs. uniprot
Match: A0A6H5KDG4_9PHAE (Uncharacterized protein n=6 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDG4_9PHAE) HSP 1 Score: 219 bits (557), Expect = 9.700e-62 Identity = 122/261 (46.74%), Postives = 150/261 (57.47%), Query Frame = 1
Query: 1 WTPAALARARDRTRKHWSRRKAELMETYRNAYDVLQKAEETNNYGSVVEDSTTMLDEAHLVRTTRVIRTVKHFLFLEIQDGVAKMEHSREAGKVADVDSRTVRRWVKEFCKGGSFVVRKRQYNKREPHSYIDDEDIRGRLREYIDRRLYRRKKDEPRLRIADVQKWINEDLLKEELAGTRGISRRTVHKWMQKLGFRWSRH--------------------------------------HKCVYVDGHNRPDVVTDRRSFS 669
WT LAR RTRKH S RK EL+ +R A D + +A N+Y S+VE TML VR RVI V+ +L +EI +GV K+ HSR G+ V +RTVR+WV +FCK G FVV R+Y KR+P YIDDEDIR + REY+D R+YRRKK +PR R+AD Q+W+N LKEE AG GI R T H W+ +LGFRW RH CVYVDGHNRPDVV RR ++
Sbjct: 390 WTKQQLARQARRTRKHCSERKEELVRIFRQALDKIDQA--GNDYTSLVEKPDTMLARVRAVRVCRVIGAVRTYLTMEINEGVKKLAHSRAVGEAVGVHARTVRKWVTDFCKDGKFVVPHREYVKRQPFCYIDDEDIREQCREYVDERIYRRKKGQPRFRVADFQRWVNTVCLKEEFAGGGGICRSTAHVWIAQLGFRWRRHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCVYVDGHNRPDVVQARRLYT 648
BLAST of mRNA_P-littoralis_Contig7.168.1 vs. uniprot
Match: A0A6H5J7G3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7G3_9PHAE) HSP 1 Score: 198 bits (504), Expect = 4.330e-56 Identity = 108/231 (46.75%), Postives = 141/231 (61.04%), Query Frame = 1
Query: 58 RKAELMETYRNAYDVLQKAEETNNYGSVVEDSTTMLDEAHL---------VRTTRVIRTVKH-------------FLFLEI------QDGVAKMEHSREAGKVADVDSRTVRRWVKEFCKGGSFVVRKRQYNKREPHSYIDDEDIRGRLREYIDRRLYRRKKDEPRLRIADVQKWINEDLLKEELAGTRGISRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSF 666
R+ EL++ Y+ D + KAE++N+Y +VED T ML E+ L +R V+ V+ FL EI ++GV KM HSR G V ++TVR+WVKEFC+ G F++RKR Y + S+ID EDI R RE IDRRLYRRKK +PR R++D Q+W+N LLKE +G GISR T H W+ +LGFRW + KCVYVDGHNRPDVV RR +
Sbjct: 405 REKELLDIYQKVVDAIDKAEQSNSYSGIVEDPTEMLTESRLPSIMCTALAIRAYAVLEEVETPKKRRVLAACTAAFLLFEIALALWIEEGVNKMRHSRYVGDVVKTTAQTVRKWVKEFCQDGKFLIRKRLYEISQADSFIDHEDIAERCREEIDRRLYRRKKTDPRFRVSDFQRWVNTVLLKEVFSGGGGISRTTAHSWICRLGFRWKKSGKCVYVDGHNRPDVVEARREY 635
BLAST of mRNA_P-littoralis_Contig7.168.1 vs. uniprot
Match: A0A6H5JM40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM40_9PHAE) HSP 1 Score: 200 bits (509), Expect = 6.240e-56 Identity = 113/222 (50.90%), Postives = 131/222 (59.01%), Query Frame = 1
Query: 1 WTPAALARARDRTRKHWSRRKAELMETYRNAYDVLQKAEETNNYGSVVEDSTTMLDEAHLVRTTRVIRTVKHFLFLEIQDGVAKMEHSREAGKVADVDSRTVRRWVKEFCKGGSFVVRKRQYNKREPHSYIDDEDIRGRLREYIDRRLYRRKKDEPRLRIADVQKWINEDLLKEELAGTRGISRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSF 666
WT L RAR R RKHW+RRKAELM+TYR+AYD LQKAE + +Y SVV D TMLD + LV TT+VI VKHF+ LEIQ+GVAK +HSR A +VA V S+TVRRWVKEF +GG+FVV KRQYNKREPHS+I+DED R SRHHK VYVDGH+RPD+V DRR F
Sbjct: 289 WTKTQLDRARGRARKHWTRRKAELMQTYRDAYDKLQKAEHSRSYDSVVADPKTMLDRSQLVHTTKVIHAVKHFVHLEIQEGVAKKDHSRAAVEVAKVQSKTVRRWVKEFREGGAFVVPKRQYNKREPHSFIEDEDKRNH-----------------------------------------------------------SRHHKSVYVDGHDRPDIVNDRRGF 451
BLAST of mRNA_P-littoralis_Contig7.168.1 vs. uniprot
Match: A0A6H5JJ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ42_9PHAE) HSP 1 Score: 196 bits (497), Expect = 1.080e-53 Identity = 105/209 (50.24%), Postives = 136/209 (65.07%), Query Frame = 1
Query: 43 KHWSRRKAELMETYRNAYDVLQKAEETNNYGSVVEDSTTMLDEAHLVRTTRVIRTVKHFLFLEIQDGVAKMEHSREAGKVADVDSRTVRRWVKEFCKGGSFVVRKRQYNKREPHSYIDDEDIRGRLREYIDRRLYRRKKDEPRLRIADVQKWINEDLLKEELAGTRGISRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSFS 669
++ + R+ +L++T+ D + K N+ S+VE+ ML + RVI V+ + LEI+ GV KM HSR G+ A V ++TVRRWV EFCK G FVV R Y KR+P +YIDDEDIR + REYID R+YRRK R R+AD +W+NE L+EE GISR T H W+ +LGFRW RH KCVYVDGHNRPDVV RR ++
Sbjct: 371 RNCTERQKKLIDTFCEGRDKIDKV--GNDLASLVENEERMLTPERIACVCRVISVVRAYFDLEIRYGVQKMVHSRAVGEGAGVHAKTVRRWVTEFCKDGKFVVPDRAYVKRQPFTYIDDEDIRDQCREYIDERIYRRKGT--RFRVADFHRWVNEVCLEEEFKDGGGISRSTAHHWISQLGFRWRRHGKCVYVDGHNRPDVVEARRLYT 575 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig7.168.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig7.168.1 >prot_P-littoralis_Contig7.168.1 ID=prot_P-littoralis_Contig7.168.1|Name=mRNA_P-littoralis_Contig7.168.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=238bp WTPAALARARDRTRKHWSRRKAELMETYRNAYDVLQKAEETNNYGSVVEDback to top mRNA from alignment at P-littoralis_Contig7:693310..695178+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig7.168.1 ID=mRNA_P-littoralis_Contig7.168.1|Name=mRNA_P-littoralis_Contig7.168.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1869bp|location=Sequence derived from alignment at P-littoralis_Contig7:693310..695178+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig7:693310..695178+ >mRNA_P-littoralis_Contig7.168.1 ID=mRNA_P-littoralis_Contig7.168.1|Name=mRNA_P-littoralis_Contig7.168.1|organism=Pylaiella littoralis U1_48|type=CDS|length=714bp|location=Sequence derived from alignment at P-littoralis_Contig7:693310..695178+ (Pylaiella littoralis U1_48)back to top |