prot_P-littoralis_Contig7.140.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig7.140.1
Unique Nameprot_P-littoralis_Contig7.140.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length288
Homology
BLAST of mRNA_P-littoralis_Contig7.140.1 vs. uniprot
Match: D7FS10_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS10_ECTSI)

HSP 1 Score: 277 bits (708), Expect = 1.390e-86
Identity = 179/300 (59.67%), Postives = 206/300 (68.67%), Query Frame = 0
Query:    6 GAARAETAAAADTMSDRGVGRGIRGSGGGSGN------GVIAFGRGGPRASIFDRIADVVFNEEQKEQNPVDAVAVRSKLEEEFRVSFREGAMGMTLSMDPDSRNAVVGNIVEQGQAFRAGVQTDDLVIGVGEQVVSSYGTVLAFMNIMGRPIELHFRKAGPSAGKGGGXXXXXPISTCDGGGH-------AAVPEGGN----GGLSKSRPVPVRGSGDRAKGDSLSKNVKGLGRGAKSGGVNAPISXXXXXXXXXXXXXXXLDREVASSDSNFSQKMEHGVVVTKYDTKGAATQRVLFL 288
            G  R   +A A + + R VGRG+R  G           GV+  G G  RASIFDRIADVVFNEEQK+Q+PVDA+AVRS+LE+EFRVSFREGAMGMTLSMDPD+R+A+VG IVEQGQAFRAG+QTDDLVIGVGE  VSSYGTVLAFMNIMGRPIELHFRK+   +G G  XXXXX IS              AA PEG      GG+SKS P+  RG+ +  +GDSLS+ +KG   G KS G  AP S               L REVASSD+ FS+KMEHGVVVTKY  KGAA QR+L+L
Sbjct:  116 GGLRDTASAEAASTTRREVGRGLRSGGSXXXXXXXXXXGVVPLGGGARRASIFDRIADVVFNEEQKKQDPVDAIAVRSELEDEFRVSFREGAMGMTLSMDPDTRDAIVGKIVEQGQAFRAGIQTDDLVIGVGENTVSSYGTVLAFMNIMGRPIELHFRKSDKGSGDGXXXXXXXXISAXHXXXXXXXXXXSAAKPEGFRATKAGGVSKSGPI--RGNLEGTRGDSLSRKLKGAA-GVKSAGGIAPRSPISPRSQGKVSGFSGLGREVASSDAGFSEKMEHGVVVTKYGKKGAAAQRLLYL 412          
BLAST of mRNA_P-littoralis_Contig7.140.1 vs. uniprot
Match: A0A835YTV8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTV8_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 5.580e-10
Identity = 44/110 (40.00%), Postives = 61/110 (55.45%), Query Frame = 0
Query:   66 EQNPVDAVAVRSKLEEEFRVSFREGAMGMTLSMDPDSRNAVVGNIVEQGQAFRAGVQTDDLVIGVGEQVVSS-----------------YGTVLAFMNIMGRPIELHFRK 158
            E   VD  A+R  L +EF V F EG++GM+L +   +  A V  +VE+GQA   GV+  D+V  VG+ V +S                 YGT LAF+NI+GRP+ L F+K
Sbjct: 1207 EDEIVDWSALRRALPKEFSVEFNEGSIGMSL-VRTAADTAEVSKVVERGQAHTGGVKAGDVVSAVGDSVATSMNXXXXXXXXXXXXXXXYGTTLAFLNILGRPVTLWFQK 1315          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig7.140.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FS10_ECTSI1.390e-8659.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YTV8_9STRA5.580e-1040.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..244
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 89..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig7contigP-littoralis_Contig7:636197..638987 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig7.140.1mRNA_P-littoralis_Contig7.140.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig7 636196..638987 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig7.140.1 ID=prot_P-littoralis_Contig7.140.1|Name=mRNA_P-littoralis_Contig7.140.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=288bp
PEASSGAARAETAAAADTMSDRGVGRGIRGSGGGSGNGVIAFGRGGPRAS
IFDRIADVVFNEEQKEQNPVDAVAVRSKLEEEFRVSFREGAMGMTLSMDP
DSRNAVVGNIVEQGQAFRAGVQTDDLVIGVGEQVVSSYGTVLAFMNIMGR
PIELHFRKAGPSAGKGGGGPGGGPISTCDGGGHAAVPEGGNGGLSKSRPV
PVRGSGDRAKGDSLSKNVKGLGRGAKSGGVNAPISPISPRSSSKVSKLGR
LDREVASSDSNFSQKMEHGVVVTKYDTKGAATQRVLFL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036034PDZ_sf